RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000108576

Ensembl transcript IDs: ENST00000261707.7, ENST00000394821.2, ENST00000401766.6, ENST00000578609.1, ENST00000579221.5, ENST00000650711.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAG +
Preference number: 1 (lower is better)
Translates to: EKALPSSGLAGNSFT*RGEGRRASSELEEE
Trigger: CTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 90 bp AGACTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATC +
Preference number: 1 (lower is better)
Translates to: RLCPCGEGPSIIRLS*KLIHLEGRRQACLI
Trigger: GATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 90 bp ACTCATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGAAGCCTTTTTCCTCTCGGTGAGTGT +
Preference number: 1 (lower is better)
Translates to: THSLGGEKAGVPHQN*RRRLWRSLFPLGEC
Trigger: ACACTCACCGAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 90 bp GGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTCGGTGAGTGTGTTACACAGCATTCA +
Preference number: 1 (lower is better)
Translates to: GEKAGVPHQNWRRRL*RSLFPLGECVTQHS
Trigger: TGAATGCTGTGTAACACACTCACCGAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR TCA 90 bp TTACTTAGACTCAACCTTAAAAATTATCTGGAGGGCTCACAATCGTaGCCGCCAGCGAGCGGCGAGGTCCACGTAAGGCTAACCCAGACT +
Preference number: 1 (lower is better)
Translates to: LLRLNLKNYLEGSQS*PPASGEVHVRLTQT
Trigger: AGTCTGGGTTAGCCTTACGTGGACCTCGCCGCTCGCTGGCGGTCACGATTGTGAGCCCTCCAGATAATTTTTAAGGTTGAGTCTAAGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CCA 90 bp ACGAGAATCCGATTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTaGACAGTCAAACTCAGTCACGTAAGGCAGACAGAACTTAAACCA +
Preference number: 1 (lower is better)
Translates to: TRIRFTLLSSPSKAT*TVKLSHVRQTELKP
Trigger: TGGTTTAAGTTCTGTCTGCCTTACGTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAATCGGATTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CCA 90 bp CCAGTTCACCTGTCTTTAGCGCTCTCAATAACAGAGAAATTAGCTTaGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCTGACCTT +
Preference number: 1 (lower is better)
Translates to: PVHLSLALSITEKLA*SPGLSLPLMALSDL
Trigger: AAGGTCAGATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTTATTGAGAGCGCTAAAGACAGGTGAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR TCA 90 bp AGCGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATaGACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATG +
Preference number: 1 (lower is better)
Translates to: SEIASLFSPTQFTYS*TVKPLEANRYQIPM
Trigger: CATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 90 bp AGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTTTCTaGGGTAATACTTTTAATAATACGCTCTTTAAATGTCCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: SIQADVPTRNFCWCF*GNTFNNTLFKCPWS
Trigger: ACTCCAGGGACATTTAAAGAGCGTATTATTAAAAGTATTACCCCAGAAACACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR TCA 90 bp GATGATCAACCGATAAGCTATATATGTGGGGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACCCAAGATGATACTCCAGTAAGGATA +
Preference number: 1 (lower is better)
Translates to: DDQPISYICGDANER*GSYAVTQDDTPVRI
Trigger: TATCCTTACTGGAGTATCATCTTGGGTTACTGCATAGGAACCTCATCTTTCATTTGCATCCCCACATATATAGCTTATCGGTTGATCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR TCA 90 bp AATTCCCATGCTGCAAATATTAATTTGCTCCTCTACCTACGCCTCTaGGAGTCACGAGACACCAAAGGCCAAATTTACTTATCTATATTA +
Preference number: 1 (lower is better)
Translates to: NSHAANINLLLYLRL*ESRDTKGQIYLSIL
Trigger: TAATATAGATAAGTAAATTTGGCCTTTGGTGTCTCGTGACTCTCAGAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGCATGGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR TCA 90 bp GACACAATTCTTATCTACTATAATTGGAGTCTTCAGTTACAGAATTaGAGGACTGATGCCATCTATTCTCTCCCCCAAACGACAAAATTC +
Preference number: 1 (lower is better)
Translates to: DTILIYYNWSLQLQN*RTDAIYSLPQTTKF
Trigger: GAATTTTGTCGTTTGGGGGAGAGAATAGATGGCATCAGTCCTTCAATTCTGTAACTGAAGACTCCAATTATAGTAGATAAGAATTGTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 2 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 2 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 2 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: WRGEGRRASSELEEEVVEGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR GCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CAA 90 bp GGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCACTaGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GEGPSIIRLSWKLIH*EGRRQACLIRTGGG
Trigger: TCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACAACCAGAGGGCCAGGTaGACACTGAAGGGGCATGTG +
Preference number: 2 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHNQRAR*TLKGHV
Trigger: CACATGCCCCTTCAGTGTTCACCTGGCCCTCTGGTT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR TCA 90 bp AGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 2 (lower is better)
Translates to: SVLHSIQADVPTRNFCWCSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...ACACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: PTALGVKMPWFRLGCQICQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR GCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTGAAATAGGCCAGATCTaGCTGTGGAACACTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PTALGVKMPWFRLGCQICEIGQI*LWNTVL
Trigger: CAGGACAGTGTTCCACAGGCAGATCTGGCCTATTTC...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 2 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGATCATACCAAGAAATaGTACAGGAGACTTTCACAG +
Preference number: 2 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRDHTKK*YRRLSQ
Trigger: CTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATAAGGTGGCAATGAGGTaGAGCAAACGCCAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KYLARRSKESEIAGHGENKVAMR*SKRQRL
Trigger: CAGCCTCTGGCGTTTGCTGCACCTCATTGCCACCTT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTCACTGGAAAAGGAGTaGGTGGCAGAGCATGTTGTA +
Preference number: 2 (lower is better)
Translates to: PTALGVKMPWFRLGCQICSLEKE*VAEHVV
Trigger: TACAACATGCTCTGCCACCCACTCCTTTTCCAGTGA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTGTGGAACACTGTCCTaGATGTTTAGCACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHCGTLS*MFSTER
Trigger: TCTCTCTGTGCTAAACATTCAGGACAGTGTTCCACA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGAACCAGAGGGCCAGGTaGACACTGAAGGGGCATGTG +
Preference number: 2 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKNQRAR*TLKGHV
Trigger: CACATGCCCCTTCAGTGTTCACCTGGCCCTCTGGTT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTTTCTGGGGTAATACTTTTGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: QADVPTRNFCWCFWGNTFGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...AAAAGTATTACCCCAGAAACACCAACAGAAATTCCTTGTGGGGACATCCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 2 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 2 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGGAGAATGCAGGAAGTaGGCCAGGGTAGACAATGCT +
Preference number: 2 (lower is better)
Translates to: NREISLVPRFVSASNGIIGECRK*ARVDNA
Trigger: AGCATTGTCTACCCTGGCCCACTTCCTGCATTCTCC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGGAGTGAAGATGCCTTaGTTTAGGTTAGGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: NREISLVPRFVSASNGIIGVKMP*FRLGCQ
Trigger: CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCCAACTGCTCTTGGAGTaGAGATGCCTTGGTTTAGGT +
Preference number: 2 (lower is better)
Translates to: NREISLVPRFVSASNGIIQLLLE*RCLGLG
Trigger: ACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTG...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp GGTGAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACC +
Preference number: 2 (lower is better)
Translates to: GECVTQHSSGCPHKEFLLDANER*GSYAVT
Trigger: GGTTACTGCATAGGAACCTCATCTTTCATTTGCATC...CAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 2 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGGCAAACGCCAGAGGCTaGCCTGTAAAGGAAAGTGTG +
Preference number: 2 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKANARG*PVKESV
Trigger: CACACTTTCCTTTACAGGCCAGCCTCTGGCGTTTGC...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCTCTTGTCATCCAGGCTaGAATGCAGTGGAACGTTTG +
Preference number: 2 (lower is better)
Translates to: NREISLVPRFVSASNGIISCHPG*NAVERL
Trigger: CAAACGTTCCACTGCATTCCAGCCTGGATGACAAGA...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTGGTTTAGGTTAGGGTaGCAGATCTGTATAACCCAG +
Preference number: 2 (lower is better)
Translates to: KYLARRSKESEIAGHGENWFRLG*QICITQ
Trigger: CTGGGTTATACAGATCTGGCACCCTAACCTAAACCA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR GCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCACAGGATGTTTCCTCTaGTGTCTGGACCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: NREISLVPRFVSASNGIITGCFL*CLDLLF
Trigger: AAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGT...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACATGGGCCCAAAATATTaGACTAGAGATAAGAATACA +
Preference number: 2 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHMGPKY*TRDKNT
Trigger: TGTATTCTTATCTCTAGTCCAATATTTTGGGCCCAT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTATGGGCCCAAAATATTaGACTAGAGATAAGAATACA +
Preference number: 2 (lower is better)
Translates to: PTALGVKMPWFRLGCQICMGPKY*TRDKNT
Trigger: TGTATTCTTATCTCTAGTCCAATATTTTGGGCCCAT...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGTGTGGAACACTGTCCTaGATGTTTAGCACAGAGAGA +
Preference number: 2 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKCGTLS*MFSTER
Trigger: TCTCTCTGTGCTAAACATTCAGGACAGTGTTCCACA...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATACAGACTCACAAGCTTaGATGGACACACTATTTTTC +
Preference number: 2 (lower is better)
Translates to: KYLARRSKESEIAGHGENTDSQA*MDTLFF
Trigger: GAAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGA +
Preference number: 2 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKVPHQN*RRRLWR
Trigger: TCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCAC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAATGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 2 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAACAGGATGTTTCCTCTaGTGTCTGGACCTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKTGCFL*CLDLLF
Trigger: AAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGGGCCTTATGTGAAATaGAAGGTGATTTACTTAGCT +
Preference number: 2 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKGPYVK*KVIYLA
Trigger: AGCTAAGTAAATCACCTTTCATTTCACATAAGGCCC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAATTTATACAGAGAACTaGAGTGATAGGTGGCCAGAT +
Preference number: 2 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKIYTEN*SDRWPD
Trigger: ATCTGGCCACCTATCACTTCAGTTCTCTGTATAAAT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAATGGAGTTAGGTCAGTaGGGGATATTTCCTAAATTC +
Preference number: 2 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKMELGQ*GIFPKF
Trigger: GAATTTAGGAAATATCCCTCACTGACCTAACTCCAT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAATGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 2 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 2 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAACTCACAAGCTTGCATaGACACACTATTTTTCATTT +
Preference number: 2 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKTHKLA*THYFSF
Trigger: AAATGAAAAATAGTGTGTCCATGCAAGCTTGTGAGT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTCTTTAAATGTCCCTaGAGTGATGATCAACCGATA +
Preference number: 2 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLFKCP*SDDQPI
Trigger: TATCGGTTGATCATCACTCCAGGGACATTTAAAGAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR TCA 72 bp CCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGTGTCCCTGTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: PGESMEISGWRP*VWAPDCVPVEK
Trigger: CTTCTCCACAGGGACACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 72 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGAAGCCTTTTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: LGGEKAGVPHQN*RRRLWRSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 72 bp CCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAGGGGAGAAGGCAGGCG +
Preference number: 3 (lower is better)
Translates to: PCGEGPSIIRLS*KLIHLEGRRQA
Trigger: CGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR CCA 72 bp GCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTCGGTGAGTGTGTTACA +
Preference number: 3 (lower is better)
Translates to: AGVPHQNWRRRL*RSLFPLGECVT
Trigger: TGTAACACACTCACCGAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579221.5
3UTR CCA 72 bp CTTCCATCATCAGGCTTAGCTGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTG +
Preference number: 3 (lower is better)
Translates to: LPSSGLAGNSFT*RGEGRRASSEL
Trigger: CAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGATGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PTALGVKMPWFRLGCQICNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CCA 72 bp CGATTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTaGACAGTCAAACTCAGTCACGTAAGGCAGACAGAA +
Preference number: 3 (lower is better)
Translates to: RFTLLSSPSKAT*TVKLSHVRQTE
Trigger: TTCTGTCTGCCTTACGTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CCA 72 bp CCAGACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTaGTTTAGGTTAGGGTGCCAGATCTGTATAACCCAG +
Preference number: 3 (lower is better)
Translates to: PDSPTALGVKMP*FRLGCQICITQ
Trigger: CTGGGTTATACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTG +
Preference number: 3 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKKWLEA*SLGTRL
Trigger: CAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTT...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 3 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCACAGACTCACAAGCTaGCATGGACACACTATTTTT +
Preference number: 3 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQHRLTS*HGHTIF
Trigger: AAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGTG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CAA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: KYLARRSKESEIAGHGENNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 3 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CCA 72 bp CTGTCTTTAGCGCTCTCAATAACAGAGAAATTAGCTTaGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTA +
Preference number: 3 (lower is better)
Translates to: LSLALSITEKLA*SPGLSLPLMAL
Trigger: TAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTTATTGAGAGCGCTAAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR TCA 72 bp GCTGCAAATATTAATTTGCTCCTCTACCTACGCCTCTaGGAGTCACGAGACACCAAAGGCCAAATTTACTTA +
Preference number: 3 (lower is better)
Translates to: AANINLLLYLRL*ESRDTKGQIYL
Trigger: TAAGTAAATTTGGCCTTTGGTGTCTCGTGACTCTCAGAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR TCA 72 bp GCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATaGACAGTGAAACCTTTAGAAGCAAACAGATATCAG +
Preference number: 3 (lower is better)
Translates to: ASLFSPTQFTYS*TVKPLEANRYQ
Trigger: CTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR-3UTR CAA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGCTGCAAATATTAATTaGCTCCTCTACCTACGCCTC +
Preference number: 3 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKAANIN*LLYLRL
Trigger: GAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR TCA 72 bp CTTATCTACTATAATTGGAGTCTTCAGTTACAGAATTaGAGGACTGATGCCATCTATTCTCTCCCCCAAACG +
Preference number: 3 (lower is better)
Translates to: LIYYNWSLQLQN*RTDAIYSLPQT
Trigger: CGTTTGGGGGAGAGAATAGATGGCATCAGTCCTTCAATTCTGTAACTGAAGACTCCAATTATAGTAGATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 3 (lower is better)
Translates to: MNSETFRSKQISDTNDHTETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
3UTR GCA 72 bp TACACTGAAACAACAATATACACAGACTCACAAGCTTaGATGGACACACTATTTTTCATTTTAGCTTCTTAC +
Preference number: 3 (lower is better)
Translates to: YTETTIYTDSQA*MDTLFFILASY
Trigger: GTAAGAAGCTAAAATGAAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGTGTATATTGTTGTTTCAGTGTA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGGAGGGCTCACAATCGTaGCCGCCAGCGAGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWEGSQS*PPASGE
Trigger: CTCGCCGCTCGCTGGCGGTCACGATTGTGAGCCCTC...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCGCGACAGTGAGCACTaGGGGCCCCGTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWRDSEH*GPRGIL
Trigger: GAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGCTCCAGGGAGGGTaGCACCCCTCACCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWRLQGG*HPSPAG
Trigger: TCCTGCTGGTGAGGGGTGCCACCCTCCCTGGAGCCT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGCACTGCGGGCCCCGTaGCATACTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEALRAP*HTPPAA
Trigger: AGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGC...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCGATCAGCGCGACAGTaGGCACTGCGGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTRSARQ*ALRAPW
Trigger: CCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCCCCTTAGACCGGTaGATCTGCAGGACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWSPLDR*ICRTWR
Trigger: GCGCCACGTCCTGCAGATCCACCGGTCTAAGGGGCT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGGCACTGCGGGCCCCGTaGCATACTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRALRAP*HTPPAA
Trigger: AGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGC...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCATCCAGCACAGCCGTaGTCACCCCCTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRHPAQP*SPPPSL
Trigger: CAGGCTTGGAGGGGGTGATCACGGCTGTGCTGGATG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGAGGGCTCACAATCGTaGCCGCCAGCGAGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTREGSQS*PPASGE
Trigger: CTCGCCGCTCGCTGGCGGTCACGATTGTGAGCCCTC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGGAGGAGGCTGGGACCTaGGTCTTTGGCCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWEEAGT*VFGHLR
Trigger: TCTGAGGTGGCCAAAGACGCAGGTCCCAGCCTCCTC...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCGATCAGCGCGACAGTaGGCACTGCGGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQRSARQ*ALRAPW
Trigger: CCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTGCCTCCAGGAGACCTaGCAGGCTGCGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGCLQET*QAARGG
Trigger: GCCTCCCCGCGCAGCCTGGCAGGTCTCCTGGAGGCA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR GCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGGCCAGGGTAGACAATaGTGGGGAAAGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEGQGRQ*WGKEAK
Trigger: CTTGGCCTCCTTTCCCCAGCATTGTCTACCCTGGCC...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCGCGCTCCCGCTGGATaGGGTTGCGCTCGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQRAPAG*GCARQG
Trigger: TCCCTGGCGAGCGCAACCCCATCCAGCGGGAGCGCG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGCTCCGCGCTCCCGCTaGATGGGGTTGCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGAPRSR*MGLRSP
Trigger: TGGCGAGCGCAACCCCATCCAGCGGGAGCGCGGAGC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGCTCCGCGCTCCCGCTaGATGGGGTTGCGCTCGCCA +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIAPRSR*MGLRSP
Trigger: TGGCGAGCGCAACCCCATCCAGCGGGAGCGCGGAGC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAACCGCTCCCGGCGCTTaGCCCAGACGTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRTAPGA*PRRVGT
Trigger: AGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAACCAGAGGGCCAGGTaGACACTGAAGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRNQRAR*TLKGHV
Trigger: CACATGCCCCTTCAGTGTTCACCTGGCCCTCTGGTT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGAGGGCTCACAATCGTaGCCGCCAGCGAGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIEGSQS*PPASGE
Trigger: CTCGCCGCTCGCTGGCGGTCACGATTGTGAGCCCTC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGACTCCTGATGTCATGTaGTCCTCCCACTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVETPDVM*SSHCSL
Trigger: GAGGCTGCAGTGGGAGGATCACATGACATCAGGAGT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTGTTCCAGGAGTTCTTaGAGCTGGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWCSRSS*SWSRAA
Trigger: AGCTGCCCTGGACCAGCTGCAAGAACTCCTGGAACA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCAGGGTAGACAATGCTaGGGAAAGGAGGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEQGRQC*GKEAKG
Trigger: TCCCTTGGCCTCCTTTCCCCAGCATTGTCTACCCTG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGATAGCGCCCAGGCCATaGTGGTGTTGTAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEIAPRP*WCCSRK
Trigger: CTTCCTACTACAACACCATCATGGCCTGGGCGCTAT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCAAGCAAGGTCGCCTTaGCTCCAGGAGACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTQARSP*LQETCQ
Trigger: CTGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR GCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAAGGTGGCAATGAGGTaGAGCAAACGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRKVAMR*SKRQRL
Trigger: CAGCCTCTGGCGTTTGCTGCACCTCATTGCCACCTT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGGGGTGCTTGGATTTGTaGATCACCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWGCLDL*ITSELS
Trigger: AGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCC...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGGTGGTGGTGGTCGCTaGGATAGAGTGCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTGGGGR*DRVPCV
Trigger: GACACACGGCACTCTATCCCAGCGACCACCACCACC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTACCGCTCCCGGCGCTTaGCCCAGACGTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLITAPGA*PRRVGT
Trigger: AGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCAGGCTGGAATGCAGTaGAACGTTTGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWQAGMQ*NVWLTA
Trigger: TGCAGTGAGCCAAACGTTCCACTGCATTCCAGCCTG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAAGAACCACCCCGGGCTaGAGCCGAGCATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRRTTPG*SRAFPS
Trigger: TGAAGGAAATGCTCGGCTTCAGCCCGGGGTGGTTCT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAAACCAGAGGGCCAGGTaGACACTGAAGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRNQRAR*TLKGHV
Trigger: CACATGCCCCTTCAGTGTTCACCTGGCCCTCTGGTT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACCCGCTGGATGGGGTTaGGCTCGCCAGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEPAGWG*ARQGGA
Trigger: GGCCCCTCCCTGGCGAGCGCAACCCCATCCAGCGGG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCCCCTTGTTATTCTaGAAGAGAGGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWSPLLF*KRGQAR
Trigger: CCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGTCGCTGGGATAGAGTaGCGTGTGTCATCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTVAGIE*RVSSPA
Trigger: TGCGGGAGATGACACACGGCACTCTATCCCAGCGAC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTCATCCAGGCTGGAATaGAGTGGAACGTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWSSRLE*SGTFGS
Trigger: TGAGCCAAACGTTCCACTGCATTCCAGCCTGGATGA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTGCCAGCAACTCCTGTaGCTAAGCCCCTTGTTATTC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWCQQLL*LSPLLF
Trigger: GAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCCTCGGAGAAGTAATTaGTGCAGTTGCCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEPRRSN*CSCQCS
Trigger: GGAACACTGGCAACTGCACCAATTACTTCTCCGAGG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTAGGCTCCAGGGAGGGTaGCACCCCTCACCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICRLQGG*HPSPAG
Trigger: TCCTGCTGGTGAGGGGTGCCACCCTCCCTGGAGCCT...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTGGGACCTGCGTCTTTaGCCACCTCAGACACATCTT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRWDLRL*PPQTHL
Trigger: AAGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCA...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGACTTGGCCCAGACGTGTaGGAACTCATCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRLGPDV*ELIQHS
Trigger: GCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAG...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGCACTGCGGGCCCCGTaGCATACTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHALRAP*HTPPAA
Trigger: AGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRVPHQN*RRRLWR
Trigger: TCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCAC...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCCGAGCAAAGCAACCTaGACAGTCAAACTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEPSKAT*TVKLSH
Trigger: GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCATCCAGCACAGCCGTaGTCACCCCCTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICHPAQP*SPPPSL
Trigger: CAGGCTTGGAGGGGGTGATCACGGCTGTGCTGGATG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCCTTTTTCCTCTCGGTaGGTGTGTTACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWPFSSR*VCYTAF
Trigger: GAATGCTGTGTAACACACTCACCGAGAGGAAAAAGG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCCTTTTTCCTCTCGGTaGGTGTGTTACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEPFSSR*VCYTAF
Trigger: GAATGCTGTGTAACACACTCACCGAGAGGAAAAAGG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLISGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCACTCCTGATGTCATGTaGTCCTCCCACTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTTPDVM*SSHCSL
Trigger: GAGGCTGCAGTGGGAGGATCACATGACATCAGGAGT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGGAGACAGTTAAGCAATaGAGTGGGGAAGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWETVKQ*SGEGAI
Trigger: TATTGCCCCTTCCCCACTTCATTGCTTAACTGTCTC...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCAAGCAAGGTCGCCTTaGCTCCAGGAGACCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIQARSP*LQETCQ
Trigger: CTGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGGCGTCGTCTCCATCCTaGTGGTTAGTAAATGACACT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWASSPS*WLVNDT
Trigger: AGTGTCATTTACTAACCAGCAGGATGGAGACGACGC...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAAACGAAGCTCGTCATaGAGTTCACCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRKRSSS*SSPRWS
Trigger: TGACCAGCGTGGTGAACTGCATGACGAGCTTCGTTT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGGGGATTACAGGAGCATaGCACCATGGCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRGITGA*HHGWLI
Trigger: AATTAGCCAGCCATGGTGGCATGCTCCTGTAATCCC...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACGCGCTCCCGCTGGATaGGGTTGCGCTCGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSERAPAG*GCARQG
Trigger: TCCCTGGCGAGCGCAACCCCATCCAGCGGGAGCGCG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGTGGTGGTGGTCGCTaGGATAGAGTGCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGGGGR*DRVPCV
Trigger: GACACACGGCACTCTATCCCAGCGACCACCACCACC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAGGAGTTCTTGCAGCTaGTCCAGGGCAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIRSSCS*SRAAGP
Trigger: CGGACCAGCTGCCCTGGACCAGCTGCAAGAACTCCT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCAGGAGTTCTTGCAGCTaGTCCAGGGCAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGRSSCS*SRAAGP
Trigger: CGGACCAGCTGCCCTGGACCAGCTGCAAGAACTCCT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCCTCGGAGAAGTAATTaGTGCAGTTGCCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRPRRSN*CSCQCS
Trigger: GGAACACTGGCAACTGCACCAATTACTTCTCCGAGG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATGCAGTTCACCACGCTaGTCACCAGGGCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRCSSPR*SPGHLG
Trigger: ACCAAGATGCCCTGGTGACCAGCGTGGTGAACTGCA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGAAAGAAAGTGGACGCTaGCATGTTGGCTATCGCTTC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEKESGR*HVGYRF
Trigger: GAAGCGATAGCCAACATGCCAGCGTCCACTTTCTTT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGGGAGTGAAGATGCCTTaGTTTAGGTTAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRGVKMP*FRLGCQ
Trigger: CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCC...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCAGGGTAGACAATGCTaGGGAAAGGAGGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTQGRQC*GKEAKG
Trigger: TCCCTTGGCCTCCTTTCCCCAGCATTGTCTACCCTG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CAA 72 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTGTGTCCCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEA*SLGTRLCPCGE
Trigger: TTCTCCACAGGGACACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCCGCCAAAGAGCTCTTaGAGAATTTTTGCGTCACTT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWPPKSS*RIFASL
Trigger: AAGTGACGCAAAAATTCTTCAAGAGCTCTTTGGCGG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGGCCCTCACATGGTCTaGTCTCTAGATAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHGPHMV*SLDSRR
Trigger: GCGGCGGCTATCTAGAGATCAGACCATGTGAGGGCC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGACTTGGAACTGCTaGGTACCCATTGGATATTTG +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWRTWNC*VPIGYL
Trigger: CAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGAGGACTTGGAACTGCTaGGTACCCATTGGATATTTG +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVERTWNC*VPIGYL
Trigger: CAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCATAGCGCCCAGGCCATaGTGGTGTTGTAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTIAPRP*WCCSRK
Trigger: CTTCCTACTACAACACCATCATGGCCTGGGCGCTAT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGTGTCCAAGCCCAGCGTaGTTAACATCAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVECPSPA*LTSERR
Trigger: TCTTCTTTCTGATGTTAATCACGCTGGGCTTGGACA...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAGAACCACCCCGGGCTaGAGCCGAGCATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIRTTPG*SRAFPS
Trigger: TGAAGGAAATGCTCGGCTTCAGCCCGGGGTGGTTCT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGATGTGGGGATGCAAATaGAAGATGAGGTTCCTATGC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVEMWGCK*KMRFLC
Trigger: GCATAGGAACCTCATCTTTCATTTGCATCCCCACAT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGATGTGGGGATGCAAATaGAAGATGAGGTTCCTATGC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWMWGCK*KMRFLC
Trigger: GCATAGGAACCTCATCTTTCATTTGCATCCCCACAT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTGTGGAACACTGTCCTaGATGTTTAGCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWCGTLS*MFSTER
Trigger: TCTCTCTGTGCTAAACATTCAGGACAGTGTTCCACA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCCCGCTGGATGGGGTTaGGCTCGCCAGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKPAGWG*ARQGGA
Trigger: GGCCCCTCCCTGGCGAGCGCAACCCCATCCAGCGGG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR GCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCAATTGATCTCTGGGTaGTTGGATTTGTGGATCACC +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWQLISG*LDLWIT
Trigger: GGTGATCCACAAATCCAAGCACCCAGAGATCAATTG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGAAATCCACCTTCTTaGCCCAGGTCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGNPPS*PRSPVP
Trigger: GGGAACGGGAGACCTGGGGCAAGAAGGTGGATTTCC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGGCCAGGGTAGACAATaGTGGGGAAAGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQGQGRQ*WGKEAK
Trigger: CTTGGCCTCCTTTCCCCAGCATTGTCTACCCTGGCC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGCCAGGGTAGACAATaGTGGGGAAAGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGQGRQ*WGKEAK
Trigger: CTTGGCCTCCTTTCCCCAGCATTGTCTACCCTGGCC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGGGTGCTTGGATTTGTaGATCACCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRGCLDL*ITSELS
Trigger: AGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAATGCATCCATTTCGGTaGTACTGTCCCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRMHPFR*YCPSAS
Trigger: GCTCGCACTGGGACAGTACCACCGAAATGGATGCAT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCCTTGGCCCAGACGTGTaGGAACTCATCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGLGPDV*ELIQHS
Trigger: GCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAG...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCAGACTGTGTCCCTGTaGAGAAGGCCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTQTVSL*RRPFHH
Trigger: ATGATGGAAGGGCCTTCTCCACAGGGACACAGTCTG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGCAAACGCCAGAGGCTaGCCTGTAAAGGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRANARG*PVKESV
Trigger: CACACTTTCCTTTACAGGCCAGCCTCTGGCGTTTGC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCTATGTTGGCCAAGCTaGTCTCAAACTCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRLCWPS*SQTPDV
Trigger: GACATCAGGAGTTTGAGACCAGCTTGGCCAACATAG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAATGCAGTGGAACGTTTaGCTCACTGCAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRMQWNV*LTATSA
Trigger: GGCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCAT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGCCAAGGATCCCAATTaGTCTCTGGGTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTAKDPN*SLGAWI
Trigger: AATCCAAGCACCCAGAGATCAATTGGGATCCTTGGC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAGCATAGCCAATCACTaGGAGAAGGAAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRSIANH*EKEIHL
Trigger: AAGGTGGATTTCCTTCTCTCAGTGATTGGCTATGCT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGCAGGACAGAAAGGATaGTATAAGGGAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRAGQKG*YKGRWL
Trigger: CAGCCACCTTCCCTTATATCATCCTTTCTGTCCTGC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCCAAGACACAGCGACTaGTTCGATCAGCGCGACAGT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIPRHSD*FDQRDS
Trigger: ACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTGGTTTAGGTTAGGGTaGCAGATCTGTATAACCCAG +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRWFRLG*QICITQ
Trigger: CTGGGTTATACAGATCTGGCACCCTAACCTAAACCA...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGAACGTTTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGERLAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAAACGTTC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGAACGTTTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQERLAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAAACGTTC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGTCGTCTCCATCCTGCTaGTTAGTAAATGACACTGAT +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVESSPSC*LVNDTD
Trigger: ATCAGTGTCATTTACTAACCAGCAGGATGGAGACGA...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCTTTGTCCCCTGGGGTaGGAACAACCTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTLCPLG*EQPSVE
Trigger: TTCTACAGAAGGTTGTTCCCACCCCAGGGGACAAAG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCTGCTGAGTACCCATTaGATATTTGCCCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTLLSTH*IFARTP
Trigger: TGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGCAGGGGACGTGGAATaGAGGGTCCAGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHAGDVE*RVQVML
Trigger: CAACATCACCTGGACCCTCCATTCCACGTCCCCTGC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAAGGCTCCAGGGAGGGTaGCACCCCTCACCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSERLQGG*HPSPAG
Trigger: TCCTGCTGGTGAGGGGTGCCACCCTCCCTGGAGCCT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTGCAGTTCACCACGCTaGTCACCAGGGCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGCSSPR*SPGHLG
Trigger: ACCAAGATGCCCTGGTGACCAGCGTGGTGAACTGCA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCTTGGCCCAGACGTGTaGGAACTCATCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICLGPDV*ELIQHS
Trigger: GCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCACCGCTCCCGGCGCTTaGCCCAGACGTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIITAPGA*PRRVGT
Trigger: AGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGT...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGACCGAGCAAAGCAACCTaGACAGTCAAACTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRPSKAT*TVKLSH
Trigger: GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGG...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAAGTCTCCCAAGTAGCTaGGATTACAGGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRSLPSS*DYRSMP
Trigger: TGGCATGCTCCTGTAATCCCAGCTACTTGGGAGACT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGGTGGTAGAGCAGCTTaGCATAGATTCTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTGGRAA*HRFCEV
Trigger: CACCTCACAGAATCTATGCCAAGCTGCTCTACCACC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCTCTATCGTCGGGATTaGCACGTCGGGATTGACTCA +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQLYRRD*HVGIDS
Trigger: TGAGTCAATCCCGACGTGTCAATCCCGACGATAGAG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAGAACTCCGTTTTCCTaGCAATCTTCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRRTPFS*QSSPSS
Trigger: TGAAGATGGAGAAGATTGTCAGGAAAACGGAGTTCT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCAATGGAGGGTCCAGGTaGTGTTGTCCTCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGNGGSR*CCPRRS
Trigger: ACTTCTCCGAGGACAACATCACCTGGACCCTCCATT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGTGCAGTAACCCAAGATaGTACTCCAGTAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVECSNPR*YSSKDN
Trigger: ATTATCCTTACTGGAGTATCATCTTGGGTTACTGCA...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCCTCTACCTACGCCTCTaGGAGTCACGAGACACCAAA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGLYLRL*ESRDTK
Trigger: TTTGGTGTCTCGTGACTCTCAGAGGCGTAGGTAGAG...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGAGACAGTTAAGCAATaGAGTGGGGAAGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRETVKQ*SGEGAI
Trigger: TATTGCCCCTTCCCCACTTCATTGCTTAACTGTCTC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCTGGAATTACAGGTGTaGGCCATTGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQLELQV*AIVPGG
Trigger: TCCACCAGGCACAATGGCTCACACCTGTAATTCCAG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGCGTCGTCTCCATCCTaGTGGTTAGTAAATGACACT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRASSPS*WLVNDT
Trigger: AGTGTCATTTACTAACCAGCAGGATGGAGACGACGC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATACCCATTGGATATTTaGCCGGACTCCACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRYPLDI*PDSTLS
Trigger: GGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTGTTCCAGGAGTTCTTaGAGCTGGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICCSRSS*SWSRAA
Trigger: AGCTGCCCTGGACCAGCTGCAAGAACTCCTGGAACA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGAAGATCTGAGCGGCTaGATCTATCCACACCCCTGT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGEDLSG*IYPHPC
Trigger: ACAGGGGTGTGGATAGATGCAGCCGCTCAGATCTTC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCCAAGACACAGCGACTaGTTCGATCAGCGCGACAGT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHPRHSD*FDQRDS
Trigger: ACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGAACGTTTGGCTCACTaGAACCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHERLAH*NLCLLG
Trigger: ACCCAGGAGGCAGAGGTTGCAGTGAGCCAAACGTTC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTGCAGTTCACCACGCTaGTCACCAGGGCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICCSSPR*SPGHLG
Trigger: ACCAAGATGCCCTGGTGACCAGCGTGGTGAACTGCA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIVPHQN*RRRLWR
Trigger: TCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCAC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGTGCCTCATCAGAACTaGAGGAGGAGGTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGVPHQN*RRRLWR
Trigger: TCTCCACAACCTCCTCCTCCAGTTCTGATGAGGCAC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGCAAACGCCAGAGGCTaGCCTGTAAAGGAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQANARG*PVKESV
Trigger: CACACTTTCCTTTACAGGCCAGCCTCTGGCGTTTGC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGACTCTCCAACTGCTCTTaGAGTGAAGATGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRLSNCS*SEDALV
Trigger: AACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAG...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGACCTTAAAAATTATCTaGAGGGCTCACAATCGTGAC +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVETLKII*RAHNRD
Trigger: GTCACGATTGTGAGCCCTCCAGATAATTTTTAAGGT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGAGAATGCAGGAAGTaGGCCAGGGTAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGECRK*ARVDNA
Trigger: AGCATTGTCTACCCTGGCCCACTTCCTGCATTCTCC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGGCGTTTCACTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRGVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGCCAACATAGTGAAACGCC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCCGCCAAAGAGCTCTTaGAGAATTTTTGCGTCACTT +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTPPKSS*RIFASL
Trigger: AAGTGACGCAAAAATTCTTCAAGAGCTCTTTGGCGG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR TCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGGCCCTCACATGGTCTaGTCTCTAGATAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEGPHMV*SLDSRR
Trigger: GCGGCGGCTATCTAGAGATCAGACCATGTGAGGGCC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGCCAAGGATCCCAATTaGTCTCTGGGTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQAKDPN*SLGAWI
Trigger: AATCCAAGCACCCAGAGATCAATTGGGATCCTTGGC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGCATAGCCAATCACTaGGAGAAGGAAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTSIANH*EKEIHL
Trigger: AAGGTGGATTTCCTTCTCTCAGTGATTGGCTATGCT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGCAGGACAGAAAGGATaGTATAAGGGAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQAGQKG*YKGRWL
Trigger: CAGCCACCTTCCCTTATATCATCCTTTCTGTCCTGC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTAGAACCACCCCGGGCTaGAGCCGAGCATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVLHSIQADVPTRNFCWCRTTPG*SRAFPS
Trigger: TGAAGGAAATGCTCGGCTTCAGCCCGGGGTGGTTCT...ACACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAATGTGGGGATGCAAATaGAAGATGAGGTTCCTATGC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRMWGCK*KMRFLC
Trigger: GCATAGGAACCTCATCTTTCATTTGCATCCCCACAT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIISGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATGTGGAACACTGTCCTaGATGTTTAGCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRCGTLS*MFSTER
Trigger: TCTCTCTGTGCTAAACATTCAGGACAGTGTTCCACA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGACTAATATTTACCACTaGACACGCTGGCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: WRGEGRRASSELEEEVVETNIYH*TRWHLD
Trigger: ATCTAAATGCCAGCGTGTTCAGTGGTAAATATTAGT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCCTCCCAGGTTCAAGTaGTTATCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHPPRFK*LSHLSL
Trigger: GAGACTGAGGTGGGATAATCACTTGAACCTGGGAGG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCTTCTGTTGCAAAGGTaGCTGTTTTTGAAACACCTA +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRLLLQR*LFLKHL
Trigger: TAGGTGTTTCAAAAACAGTCACCTTTGCAACAGAAG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGAGGAGGCTGGGACCTaGGTCTTTGGCCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEEEAGT*VFGHLR
Trigger: TCTGAGGTGGCCAAAGACGCAGGTCCCAGCCTCCTC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGAGGAGGCTGGGACCTaGGTCTTTGGCCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIEEAGT*VFGHLR
Trigger: TCTGAGGTGGCCAAAGACGCAGGTCCCAGCCTCCTC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGAAATAGGCCAGATCTaGCTGTGGAACACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIEIGQI*LWNTVL
Trigger: CAGGACAGTGTTCCACAGGCAGATCTGGCCTATTTC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGGGGATTACAGGAGCATaGCACCATGGCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQGITGA*HHGWLI
Trigger: AATTAGCCAGCCATGGTGGCATGCTCCTGTAATCCC...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCCTTTGTCCCCTGGGGTaGGAACAACCTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGLCPLG*EQPSVE
Trigger: TTCTACAGAAGGTTGTTCCCACCCCAGGGGACAAAG...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATAGGAGTTCTTGCAGCTaGTCCAGGGCAGCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENRSSCS*SRAAGP
Trigger: CGGACCAGCTGCCCTGGACCAGCTGCAAGAACTCCT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCCTCGGAGAAGTAATTaGTGCAGTTGCCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQPRRSN*CSCQCS
Trigger: GGAACACTGGCAACTGCACCAATTACTTCTCCGAGG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTGGGACCTGCGTCTTTaGCCACCTCAGACACATCTT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHWDLRL*PPQTHL
Trigger: AAGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTGGGACCTGCGTCTTTaGCCACCTCAGACACATCTT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICWDLRL*PPQTHL
Trigger: AAGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTGGACGCTGGCATGTTaGCTATCGCTTCTGCATACG +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICWTLAC*LSLLHT
Trigger: CGTATGCAGAAGCGATAGCCAACATGCCAGCGTCCA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCTCTTTAAATGTCCCTaGAGTGATGATCAACCGATA +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRLFKCP*SDDQPI
Trigger: TATCGGTTGATCATCACTCCAGGGACATTTAAAGAG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGCCAGATCTGCCTGTaGAACACTGTCCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGQICL*NTVLNV
Trigger: AACATTCAGGACAGTGTTCCACAGGCAGATCTGGCC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGAGTCTCCCAAGTAGCTaGGATTACAGGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQSLPSS*DYRSMP
Trigger: TGGCATGCTCCTGTAATCCCAGCTACTTGGGAGACT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGACATAACCAATCCCTTTaGAAATCGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRHNQSL*KSGRFS
Trigger: GGAAAATCTGCCCGATTTTCAAAGGGATTGGTTATG...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCATCCAGCACAGCCGTaGTCACCCCCTCCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKHPAQP*SPPPSL
Trigger: CAGGCTTGGAGGGGGTGATCACGGCTGTGCTGGATG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRDANER*GSYAVT
Trigger: GGTTACTGCATAGGAACCTCATCTTTCATTTGCATC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCCTTTTTCCTCTCGGTaGGTGTGTTACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIPFSSR*VCYTAF
Trigger: GAATGCTGTGTAACACACTCACCGAGAGGAAAAAGG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGCAACTGCTCTTGGAGTaGAGATGCCTTGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQQLLLE*RCLGLG
Trigger: ACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTG...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGACTAATATTTACCACTaGACACGCTGGCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRTNIYH*TRWHLD
Trigger: ATCTAAATGCCAGCGTGTTCAGTGGTAAATATTAGT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCATTCAAACTTATTCTaGCGAGGTCCTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTHSNLF*RGPSPM
Trigger: CATTGGTGAAGGACCTCGTCAGAATAAGTTTGAATG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GGTGAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGACGTCCCTGCAGAACTaGGTGATGCAAAAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GECVTQHSSGCPHKEFLLTSLQN*VMQKSG
Trigger: CCCTGACTTTTGCATCACTCAGTTCTGCAGGGACGT...CAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATGTCGCTGGGATAGAGTaGCGTGTGTCATCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENVAGIE*RVSSPA
Trigger: TGCGGGAGATGACACACGGCACTCTATCCCAGCGAC...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGTCGCTGGGATAGAGTaGCGTGTGTCATCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIVAGIE*RVSSPA
Trigger: TGCGGGAGATGACACACGGCACTCTATCCCAGCGAC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGTTGGCTATCGCTTCTaGATACGTGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIVGYRF*IRDEEE
Trigger: CTCCTCTTCATCACGTATGCAGAAGCGATAGCCAAC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAACGCGACAGTGAGCACTaGGGGCCCCGTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKRDSEH*GPRGIL
Trigger: GAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCG...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACGCGACAGTGAGCACTaGGGGCCCCGTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKRDSEH*GPRGIL
Trigger: GAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR GCA 90 bp CAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTTTCTGGGGTAATACTTTTGGGAGAAGGCAGGCGTaGCTCATCAGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QADVPTRNFCWCFWGNTFGRRQA*LIRTGG
Trigger: TCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCC...AAAAGTATTACCCCAGAAACACCAACAGAAATTCCTTGTGGGGACATCCGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR GCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAACAGGATGTTTCCTCTaGTGTCTGGACCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRTGCFL*CLDLLF
Trigger: AAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGGGATTACAGGAGCATaGCACCATGGCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHGITGA*HHGWLI
Trigger: AATTAGCCAGCCATGGTGGCATGCTCCTGTAATCCC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGAAAGAAAGTGGACGCTaGCATGTTGGCTATCGCTTC +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQKESGR*HVGYRF
Trigger: GAAGCGATAGCCAACATGCCAGCGTCCACTTTCTTT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAACCGCTCCCGGCGCTTaGCCCAGACGTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKTAPGA*PRRVGT
Trigger: AGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GGTGAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: GECVTQHSSGCPHKEFLLGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...CAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR CCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTGGCCAGATCTGCCTGTaGAACACTGTCCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICGQICL*NTVLNV
Trigger: AACATTCAGGACAGTGTTCCACAGGCAGATCTGGCC...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCCGAGCAAAGCAACCTaGACAGTCAAACTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICPSKAT*TVKLSH
Trigger: GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGTCTTGTCATCCAGGCTaGAATGCAGTGGAACGTTTG +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQSCHPG*NAVERL
Trigger: CAAACGTTCCACTGCATTCCAGCCTGGATGACAAGA...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTCTTGTCATCCAGGCTaGAATGCAGTGGAACGTTTG +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGSCHPG*NAVERL
Trigger: CAAACGTTCCACTGCATTCCAGCCTGGATGACAAGA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACAGTCTCCCAAGTAGCTaGGATTACAGGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHSLPSS*DYRSMP
Trigger: TGGCATGCTCCTGTAATCCCAGCTACTTGGGAGACT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTGTGGAACACTGTCCTaGATGTTTAGCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGCGTLS*MFSTER
Trigger: TCTCTCTGTGCTAAACATTCAGGACAGTGTTCCACA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACACTGATGTCCATCTaGCAAGGATCCCAATTGATC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGTLMSI*QGSQLI
Trigger: GATCAATTGGGATCCTTGGCAGATGGACATCAGTGT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCTCCTCCATATTGAAATaGATCCATTTCGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTSSILK*IHFGGT
Trigger: AGTACCACCGAAATGGATGCATTTCAATATGGAGGA...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTTGGTTTAGGTTAGGGTaGCAGATCTGTATAACCCAG +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIWFRLG*QICITQ
Trigger: CTGGGTTATACAGATCTGGCACCCTAACCTAAACCA...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCTCCACTTTGTCCCCTaGGGTGGGAACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENLHFVP*GGNNLL
Trigger: CAGAAGGTTGTTCCCACCCCAGGGGACAAAGTGGAG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCTCTTTAAATGTCCCTaGAGTGATGATCAACCGATA +
Preference number: 4 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTLFKCP*SDDQPI
Trigger: TATCGGTTGATCATCACTCCAGGGACATTTAAAGAG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGACTCACAAGCTTGCATaGACACACTATTTTTCATTT +
Preference number: 4 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRTHKLA*THYFSF
Trigger: AAATGAAAAATAGTGTGTCCATGCAAGCTTGTGAGT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCCAGGGTAGACAATGCTaGGGAAAGGAGGCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIQGRQC*GKEAKG
Trigger: TCCCTTGGCCTCCTTTCCCCAGCATTGTCTACCCTG...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCTATGTTGGCCAAGCTaGTCTCAAACTCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHLCWPS*SQTPDV
Trigger: GACATCAGGAGTTTGAGACCAGCTTGGCCAACATAG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGGCGTTTCACTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHGVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGCCAACATAGTGAAACGCC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCAGCCATTGTGCCTGGTaGAGAGGGTATTATTTCACT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGSHCAW*RGYYFT
Trigger: AGTGAAATAATACCCTCTCCACCAGGCACAATGGCT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGTTGACACGTCGGGATTaGCTCATTTGTTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQLTRRD*LICSSF
Trigger: GAAAGAAGAACAAATGAGTCAATCCCGACGTGTCAA...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATGCTGATAGCTGCTTCTaGGAATTCAAGGGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENADSCF*EFKGVV
Trigger: GACGACGCCCTTGAATTCTCAGAAGCAGCTATCAGC...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCATAACCAATCCCTTTaGAAATCGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIHNQSL*KSGRFS
Trigger: GGAAAATCTGCCCGATTTTCAAAGGGATTGGTTATG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCATAGCGCCCAGGCCATaGTGGTGTTGTAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIIAPRP*WCCSRK
Trigger: CTTCCTACTACAACACCATCATGGCCTGGGCGCTAT...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTGTCCAAGCCCAGCGTaGTTAACATCAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHCPSPA*LTSERR
Trigger: TCTTCTTTCTGATGTTAATCACGCTGGGCTTGGACA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTCGGTGAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGATGTGGGGATGCAAATaGAAGATGAGGTTCCTATGC +
Preference number: 4 (lower is better)
Translates to: LGECVTQHSSGCPHKEFLMWGCK*KMRFLC
Trigger: GCATAGGAACCTCATCTTTCATTTGCATCCCCACAT...CAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTCACCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GGAGGAGGAGGTTGTGGAGAAGCCTTTTTCCTCTCGGTGAGTGTGTTACACAGCGATCATACCAAGAAATaGTACAGGAGACTTTCACAG +
Preference number: 4 (lower is better)
Translates to: GGGGCGEAFFLSVSVLHSDHTKK*YRRLSQ
Trigger: CTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATC...GCTGTGTAACACACTCACCGAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCTCTACCTACGCCTCTaGGAGTCACGAGACACCAAA +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENLYLRL*ESRDTK
Trigger: TTTGGTGTCTCGTGACTCTCAGAGGCGTAGGTAGAG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAACTAATATTTACCACTaGACACGCTGGCATTTAGAT +
Preference number: 4 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRTNIYH*TRWHLD
Trigger: ATCTAAATGCCAGCGTGTTCAGTGGTAAATATTAGT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCTGGAATTACAGGTGTaGGCCATTGTGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENLELQV*AIVPGG
Trigger: TCCACCAGGCACAATGGCTCACACCTGTAATTCCAG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATGAAGATCTGAGCGGCTaGATCTATCCACACCCCTGT +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENEDLSG*IYPHPC
Trigger: ACAGGGGTGTGGATAGATGCAGCCGCTCAGATCTTC...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAATGCATCCATTTCGGTaGTACTGTCCCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEMHPFR*YCPSAS
Trigger: GCTCGCACTGGGACAGTACCACCGAAATGGATGCAT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGGCAGGGGACGTGGAATaGAGGGTCCAGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKAGDVE*RVQVML
Trigger: CAACATCACCTGGACCCTCCATTCCACGTCCCCTGC...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTCTAAGTATGTGGGGTaGGGAGAATCCATATCCGAA +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHSKYVG*GESISE
Trigger: TTCGGATATGGATTCTCCCCACCCCACATACTTAGA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCCAGGCTGGAATGCAGTaGAACGTTTGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIQAGMQ*NVWLTA
Trigger: TGCAGTGAGCCAAACGTTCCACTGCATTCCAGCCTG...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTACAGAGAAATTAGCTTaGTCCCCAGGTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICTEKLA*SPGLSL
Trigger: CAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGT...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGCCAAGGATCCCAATTaGTCTCTGGGTGCTTGGATT +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEAKDPN*SLGAWI
Trigger: AATCCAAGCACCCAGAGATCAATTGGGATCCTTGGC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTGTCCAAGCCCAGCGTaGTTAACATCAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: ECVTQHSSGCPHKEFLLVCPSPA*LTSERR
Trigger: TCTTCTTTCTGATGTTAATCACGCTGGGCTTGGACA...CACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCTGCAGTAACCCAAGATaGTACTCCAGTAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGCSNPR*YSSKDN
Trigger: ATTATCCTTACTGGAGTATCATCTTGGGTTACTGCA...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGATCATACCAAGAAATaGTACAGGAGACTTTCACAG +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGDHTKK*YRRLSQ
Trigger: CTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGGGCCTTATGTGAAATaGAAGGTGATTTACTTAGCT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIGPYVK*KVIYLA
Trigger: AGCTAAGTAAATCACCTTTCATTTCACATAAGGCCC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTATTTATACAGAGAACTaGAGTGATAGGTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIIYTEN*SDRWPD
Trigger: ATCTGGCCACCTATCACTTCAGTTCTCTGTATAAAT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATGGAGTTAGGTCAGTaGGGGATATTTCCTAAATTC +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQMELGQ*GIFPKF
Trigger: GAATTTAGGAAATATCCCTCACTGACCTAACTCCAT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTTACAAGGGCACTGTATaGATTTTAGAAAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICYKGTV*ILERGL
Trigger: GAGTCCCCTTTCTAAAATTCATACAGTGCCCTTGTA...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGGAAATCCACCTTCTTaGCCCAGGTCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKGNPPS*PRSPVP
Trigger: GGGAACGGGAGACCTGGGGCAAGAAGGTGGATTTCC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCAAACGAAGCTCGTCATaGAGTTCACCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIKRSSS*SSPRWS
Trigger: TGACCAGCGTGGTGAACTGCATGACGAGCTTCGTTT...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCCAAGACACAGCGACTaGTTCGATCAGCGCGACAGT +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKPRHSD*FDQRDS
Trigger: ACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACAGACTCACAAGCTTaGATGGACACACTATTTTTC +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGTDSQA*MDTLFF
Trigger: GAAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTACAGACTCACAAGCTTaGATGGACACACTATTTTTC +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLITDSQA*MDTLFF
Trigger: GAAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATGAAATAGGCCAGATCTaGCTGTGGAACACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENEIGQI*LWNTVL
Trigger: CAGGACAGTGTTCCACAGGCAGATCTGGCCTATTTC...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCTGCAAATATTAATTTaGTCCTCTACCTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLILQILI*SSTYAS
Trigger: AGAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAAGGTGTGAGCCATTGTaGCTGGTGGAGAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSERCEPL*LVERVL
Trigger: TAATACCCTCTCCACCAGGCACAATGGCTCACACCT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCTTTGTCCCCTGGGGTaGGAACAACCTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENLCPLG*EQPSVE
Trigger: TTCTACAGAAGGTTGTTCCCACCCCAGGGGACAAAG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCTCCACTTTGTCCCCTaGGGTGGGAACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKLHFVP*GGNNLL
Trigger: CAGAAGGTTGTTCCCACCCCAGGGGACAAAGTGGAG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCCTGCTGAGTACCCATTaGATATTTGCCCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIILLSTH*IFARTP
Trigger: TGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAG...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGCAGGGGACGTGGAATaGAGGGTCCAGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKAGDVE*RVQVML
Trigger: CAACATCACCTGGACCCTCCATTCCACGTCCCCTGC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAAGCCCCTTAGACCGGTaGATCTGCAGGACGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKSPLDR*ICRTWR
Trigger: GCGCCACGTCCTGCAGATCCACCGGTCTAAGGGGCT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCCTCTTTAAATGTCCCTaGAGTGATGATCAACCGATA +
Preference number: 4 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGLFKCP*SDDQPI
Trigger: TATCGGTTGATCATCACTCCAGGGACATTTAAAGAG...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATGGAGTGAAGATGCCTTaGTTTAGGTTAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENGVKMP*FRLGCQ
Trigger: CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCC...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCAATGTCTAAGTATGTaGGGTGGGGAGAATCCATAT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHQCLSM*GGENPY
Trigger: ATATGGATTCTCCCCACCCCACATACTTAGACATTG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGGTGGTAGAGCAGCTTaGCATAGATTCTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEGGRAA*HRFCEV
Trigger: CACCTCACAGAATCTATGCCAAGCTGCTCTACCACC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTGCAGTAACCCAAGATaGTACTCCAGTAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHCSNPR*YSSKDN
Trigger: ATTATCCTTACTGGAGTATCATCTTGGGTTACTGCA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCAGTGGCTGGAGGCCTTaGGTCTGGGCACCAGACTGT +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTSGWRP*VWAPDC
Trigger: ACAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTGATCATACCAAGAAATaGTACAGGAGACTTTCACAG +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICDHTKK*YRRLSQ
Trigger: CTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATC...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGGGCCTTATGTGAAATaGAAGGTGATTTACTTAGCT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHGPYVK*KVIYLA
Trigger: AGCTAAGTAAATCACCTTTCATTTCACATAAGGCCC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTATTTATACAGAGAACTaGAGTGATAGGTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICIYTEN*SDRWPD
Trigger: ATCTGGCCACCTATCACTTCAGTTCTCTGTATAAAT...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAACTCCTGATGTCATGTaGTCCTCCCACTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKTPDVM*SSHCSL
Trigger: GAGGCTGCAGTGGGAGGATCACATGACATCAGGAGT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCTTCTGTTGCAAAGGTaGCTGTTTTTGAAACACCTA +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHLLLQR*LFLKHL
Trigger: TAGGTGTTTCAAAAACAGTCACCTTTGCAACAGAAG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCTTCAGTTACAGAATTaGAGGACTGATGCCATCTAT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICLQLQN*RTDAIY
Trigger: ATAGATGGCATCAGTCCTTCAATTCTGTAACTGAAG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTACCCATTGGATATTTaGCCGGACTCCACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENYPLDI*PDSTLS
Trigger: GGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATGTTCCAGGAGTTCTTaGAGCTGGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKCSRSS*SWSRAA
Trigger: AGCTGCCCTGGACCAGCTGCAAGAACTCCTGGAACA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTCTGCAAATATTAATTTaGTCCTCTACCTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTALGVKMPWFRLGCQICLQILI*SSTYAS
Trigger: AGAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAG...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGGTGGTGGTGGTCGCTaGGATAGAGTGCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTGGGGR*DRVPCV
Trigger: GACACACGGCACTCTATCCCAGCGACCACCACCACC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTACAAGGAATTTCTGTTaGTGTTTCTGGGGTAATACT +
Preference number: 4 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLITRNFC*CFWGNT
Trigger: AGTATTACCCCAGAAACACCAACAGAAATTCCTTGT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGACAAGGAATTTCTGTTaGTGTTTCTGGGGTAATACT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQTRNFC*CFWGNT
Trigger: AGTATTACCCCAGAAACACCAACAGAAATTCCTTGT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAATCACTGGAAAAGGAGTaGGTGGCAGAGCATGTTGTA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSESLEKE*VAEHVV
Trigger: TACAACATGCTCTGCCACCCACTCCTTTTCCAGTGA...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACTCTCCAACTGCTCTTaGAGTGAAGATGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSELSNCS*SEDALV
Trigger: AACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACTATGTTGGCCAAGCTaGTCTCAAACTCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSELCWPS*SQTPDV
Trigger: GACATCAGGAGTTTGAGACCAGCTTGGCCAACATAG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGGCGTTTCACTATGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEGVSLC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGCCAACATAGTGAAACGCC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCAGGCTGGAATGCAGTaGAACGTTTGGCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKQAGMQ*NVWLTA
Trigger: TGCAGTGAGCCAAACGTTCCACTGCATTCCAGCCTG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTCTTGTCATCCAGGCTaGAATGCAGTGGAACGTTTG +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENSCHPG*NAVERL
Trigger: CAAACGTTCCACTGCATTCCAGCCTGGATGACAAGA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CAA 72 bp GGTGGTAGAGCAGCTTGGCATAGATTCTGTGAGGTGTaGGTAAGAGAAATACCACCTGACATTCCAACTGAA +
Preference number: 4 (lower is better)
Translates to: GGRAAWHRFCEV*VREIPPDIPTE
Trigger: TTCAGTTGGAATGTCAGGTGGTATTTCTCTTACCAACACCTCACAGAATCTATGCCAAGCTGCTCTACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGCTGATAGCTGCTTCTaGGAATTCAAGGGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKADSCF*EFKGVV
Trigger: GACGACGCCCTTGAATTCTCAGAAGCAGCTATCAGC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATAGCATAGCCAATCACTaGGAGAAGGAAATCCACCTT +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENSIANH*EKEIHL
Trigger: AAGGTGGATTTCCTTCTCTCAGTGATTGGCTATGCT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: SVLHSIQADVPTRNFCWCDANER*GSYAVT
Trigger: GGTTACTGCATAGGAACCTCATCTTTCATTTGCATC...ACACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCTGGTCTCAAACTCCTaGTGTCATGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKLVSNS*CHVILP
Trigger: TGGGAGGATCACATGACATCAGGAGTTTGAGACCAG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAACCTCCCAGGTTCAAGTaGTTATCCCACCTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKPPRFK*LSHLSL
Trigger: GAGACTGAGGTGGGATAATCACTTGAACCTGGGAGG...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACTCTATCGTCGGGATTaGCACGTCGGGATTGACTCT +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKLYRRD*HVGIDS
Trigger: AGAGTCAATCCCGACGTGTCAATCCCGACGATAGAG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401766.6
CDS-3UTR GCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCTCTTGAAGAATTTTTaGGTCACTTTGAGGCGAATA +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHLLKNF*VTLRRI
Trigger: TATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR GCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGGAAATCCACCTTCTTaGCCCAGGTCTCCCGTTCCC +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKGNPPS*PRSPVP
Trigger: GGGAACGGGAGACCTGGGGCAAGAAGGTGGATTTCC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGAAACGAAGCTCGTCATaGAGTTCACCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKKRSSS*SSPRWS
Trigger: TGACCAGCGTGGTGAACTGCATGACGAGCTTCGTTT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAATGGTTTAGGTTAGGGTaGCAGATCTGTATAACCCAG +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEWFRLG*QICITQ
Trigger: CTGGGTTATACAGATCTGGCACCCTAACCTAAACCA...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGGGTGCTTGGATTTGTaGATCACCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKGCLDL*ITSELS
Trigger: AGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAATGCATCCATTTCGGTaGTACTGTCCCAGTGCGAGC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKMHPFR*YCPSAS
Trigger: GCTCGCACTGGGACAGTACCACCGAAATGGATGCAT...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCCTTGGCCCAGACGTGTaGGAACTCATCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTLGPDV*ELIQHS
Trigger: GCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAG...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGGAAACTCATTCACTTaGAGGGGAGAAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKGNSFT*RGEGRR
Trigger: ACGCCTGCCTTCTCCCCTCCAAGTGAATGAGTTTCC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTTTCTGGGGTAATACTTTTTGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: QADVPTRNFCWCFWGNTFCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...AAAAGTATTACCCCAGAAACACCAACAGAAATTCCTTGTGGGGACATCCGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR CCA 90 bp GACTCTCCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGACTCACAAGCTTGCATaGACACACTATTTTTCATTT +
Preference number: 4 (lower is better)
Translates to: DSPTALGVKMPWFRLGCQTHKLA*THYFSF
Trigger: AAATGAAAAATAGTGTGTCCATGCAAGCTTGTGAGT...CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGGGAGTGAAGATGCCTTaGTTTAGGTTAGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKGVKMP*FRLGCQ
Trigger: CTGGCACCCTAACCTAAACCAAGGCATCTTCACTCC...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGGAGAATGCAGGAAGTaGGCCAGGGTAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKGECRK*ARVDNA
Trigger: AGCATTGTCTACCCTGGCCCACTTCCTGCATTCTCC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACTGCACCCAGCCTCTTaGGTATTTCTTACTGATACA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSELHPAS*VFLTDT
Trigger: TGTATCAGTAAGAAATACCCAAGAGGCTGGGTGCAG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAATGCAGTGGAACGTTTaGCTCACTGCAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKMQWNV*LTATSA
Trigger: GGCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCAT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAAGCCATTGTGCCTGGTaGAGAGGGTATTATTTCACT +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSESHCAW*RGYYFT
Trigger: AGTGAAATAATACCCTCTCCACCAGGCACAATGGCT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAAGAACTCCGTTTTCCTaGCAATCTTCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSERTPFS*QSSPSS
Trigger: TGAAGATGGAGAAGATTGTCAGGAAAACGGAGTTCT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGCAGGACAGAAAGGATaGTATAAGGGAAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKAGQKG*YKGRWL
Trigger: CAGCCACCTTCCCTTATATCATCCTTTCTGTCCTGC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGTTGGTGTTGCAGTAACCCAAGATaGTACTCCAGTAAGGATAAT +
Preference number: 4 (lower is better)
Translates to: SVLHSIQADVPTRNFCWCCSNPR*YSSKDN
Trigger: ATTATCCTTACTGGAGTATCATCTTGGGTTACTGCA...ACACCAACAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTACAAGGGCACTGTATaGATTTTAGAAAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENYKGTV*ILERGL
Trigger: GAGTCCCCTTTCTAAAATTCATACAGTGCCCTTGTA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAAGCCCCTTGTTATTCTaGAAGAGAGGGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKSPLLF*KRGQAR
Trigger: CCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCAAGGTGGCAATGAGGTaGAGCAAACGCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTKVAMR*SKRQRL
Trigger: CAGCCTCTGGCGTTTGCTGCACCTCATTGCCACCTT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGAAATAGGCCAGATCTaGCTGTGGAACACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKEIGQI*LWNTVL
Trigger: CAGGACAGTGTTCCACAGGCAGATCTGGCCTATTTC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATCATCCAGGCTGGAATaGAGTGGAACGTTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKSSRLE*SGTFGS
Trigger: TGAGCCAAACGTTCCACTGCATTCCAGCCTGGATGA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAAGGTGTGAGCCATTGTaGCTGGTGGAGAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKRCEPL*LVERVL
Trigger: TAATACCCTCTCCACCAGGCACAATGGCTCACACCT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCTCGTCTCCATCCTGCTaGTTAGTAAATGACACTGAT +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIISSPSC*LVNDTD
Trigger: ATCAGTGTCATTTACTAACCAGCAGGATGGAGACGA...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAATCGTCTCCATCCTGCTaGTTAGTAAATGACACTGAT +
Preference number: 4 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSESSPSC*LVNDTD
Trigger: ATCAGTGTCATTTACTAACCAGCAGGATGGAGACGA...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCCTCCACTTTGTCCCCTaGGGTGGGAACAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTLHFVP*GGNNLL
Trigger: CAGAAGGTTGTTCCCACCCCAGGGGACAAAGTGGAG...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACACTCACAAGCTTGCATaGACACACTATTTTTCATTT +
Preference number: 4 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHTHKLA*THYFSF
Trigger: AAATGAAAAATAGTGTGTCCATGCAAGCTTGTGAGT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGTCACTGGAAAAGGAGTaGGTGGCAGAGCATGTTGTA +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKSLEKE*VAEHVV
Trigger: TACAACATGCTCTGCCACCCACTCCTTTTCCAGTGA...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCTCTCCAACTGCTCTTaGAGTGAAGATGCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKLSNCS*SEDALV
Trigger: AACCAAGGCATCTTCACTCCAAGAGCAGTTGGAGAG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGCTGATAGCTGCTTCTaGGAATTCAAGGGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKADSCF*EFKGVV
Trigger: GACGACGCCCTTGAATTCTCAGAAGCAGCTATCAGC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCAATGTAAAAGGCAATaGTGCAGATGGCATAACCAA +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENQCKRQ*CRWHNQ
Trigger: TTGGTTATGCCATCTGCATCATTGCCTTTTACATTG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCAATGGAGGGTCCAGGTaGTGTTGTCCTCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTNGGSR*CCPRRS
Trigger: ACTTCTCCGAGGACAACATCACCTGGACCCTCCATT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAAATGGAGGGTCCAGGTaGTGTTGTCCTCGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKNGGSR*CCPRRS
Trigger: ACTTCTCCGAGGACAACATCACCTGGACCCTCCATT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGATCATACCAAGAAATaGTACAGGAGACTTTCACAG +
Preference number: 4 (lower is better)
Translates to: NREISLVPRFVSASNGIIDHTKK*YRRLSQ
Trigger: CTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACAACTGCTCTTGGAGTaGAGATGCCTTGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKQLLLE*RCLGLG
Trigger: ACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCCTCTACCTACGCCTCTaGGAGTCACGAGACACCAAA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTLYLRL*ESRDTK
Trigger: TTTGGTGTCTCGTGACTCTCAGAGGCGTAGGTAGAG...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGCAATTGATCTCTGGGTaGTTGGATTTGTGGATCACC +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKQLISG*LDLWIT
Trigger: GGTGATCCACAAATCCAAGCACCCAGAGATCAATTG...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATACCCATTGGATATTTaGCCGGACTCCACTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKYPLDI*PDSTLS
Trigger: GGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTCCTCCATATTGAAATaGATCCATTTCGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: KYLARRSKESEIAGHGENSSILK*IHFGGT
Trigger: AGTACCACCGAAATGGATGCATTTCAATATGGAGGA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGAAGATCTGAGCGGCTaGATCTATCCACACCCCTGT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKEDLSG*IYPHPC
Trigger: ACAGGGGTGTGGATAGATGCAGCCGCTCAGATCTTC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGTTGGCTATCGCTTCTaGATACGTGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKVGYRF*IRDEEE
Trigger: CTCCTCTTCATCACGTATGCAGAAGCGATAGCCAAC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCTGGACGCTGGCATGTTaGCTATCGCTTCTGCATACG +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTWTLAC*LSLLHT
Trigger: CGTATGCAGAAGCGATAGCCAACATGCCAGCGTCCA...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGGAGAATGCAGGAAGTaGGCCAGGGTAGACAATGCT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKGECRK*ARVDNA
Trigger: AGCATTGTCTACCCTGGCCCACTTCCTGCATTCTCC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCATGCAGTGGAACGTTTaGCTCACTGCAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTMQWNV*LTATSA
Trigger: GGCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCAT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGACAGAGAAATTAGCTTaGTCCCCAGGTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKTEKLA*SPGLSL
Trigger: CAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAAGGACTTGGAACTGCTaGGTACCCATTGGATATTTG +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKRTWNC*VPIGYL
Trigger: CAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAATGTCCAAGCCCAGCGTaGTTAACATCAGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKCPSPA*LTSERR
Trigger: TCTTCTTTCTGATGTTAATCACGCTGGGCTTGGACA...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKDANER*GSYAVT
Trigger: GGTTACTGCATAGGAACCTCATCTTTCATTTGCATC...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTGGTCTCAAACTCCTaGTGTCATGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLVSNS*CHVILP
Trigger: TGGGAGGATCACATGACATCAGGAGTTTGAGACCAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAACACTGATGTCCATCTaGCAAGGATCCCAATTGATC +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKTLMSI*QGSQLI
Trigger: GATCAATTGGGATCCTTGGCAGATGGACATCAGTGT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCAGGTGTGAGCCATTGTaGCTGGTGGAGAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTRCEPL*LVERVL
Trigger: TAATACCCTCTCCACCAGGCACAATGGCTCACACCT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTGCTGAGTACCCATTaGATATTTGCCCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLLSTH*IFARTP
Trigger: TGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCTGGAGGAGGAGGTTGTaGAGAAGCCTTTTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTWRRRL*RSLFPL
Trigger: GAGAGGAAAAAGGCTTCTCCACAACCTCCTCCTCCA...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAATGTCACAGTCTACCATaGGAATATGTCCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKCHSLP*EYVQGN
Trigger: ATTCCCCTGGACATATTCCCATGGTAGACTGTGACA...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGGCCAGATCTGCCTGTaGAACACTGTCCTGAATGTT +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTGQICL*NTVLNV
Trigger: AACATTCAGGACAGTGTTCCACAGGCAGATCTGGCC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAATCTAAGTATGTGGGGTaGGGAGAATCCATATCCGAA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKSKYVG*GESISE
Trigger: TTCGGATATGGATTCTCCCCACCCCACATACTTAGA...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACTGCACCCAGCCTCTTaGGTATTTCTTACTGATACA +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKLHPAS*VFLTDT
Trigger: TGTATCAGTAAGAAATACCCAAGAGGCTGGGTGCAG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAACAGAGAAATTAGCTTaGTCCCCAGGTTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKTEKLA*SPGLSL
Trigger: CAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGT...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGGTGGTAGAGCAGCTTaGCATAGATTCTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTGGRAA*HRFCEV
Trigger: CACCTCACAGAATCTATGCCAAGCTGCTCTACCACC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACATAACCAATCCCTTTaGAAATCGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKHNQSL*KSGRFS
Trigger: GGAAAATCTGCCCGATTTTCAAAGGGATTGGTTATG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGATGCAAATGAAAGATaGGGTTCCTATGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKDANER*GSYAVT
Trigger: GGTTACTGCATAGGAACCTCATCTTTCATTTGCATC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGAGACAGTTAAGCAATaGAGTGGGGAAGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTETVKQ*SGEGAI
Trigger: TATTGCCCCTTCCCCACTTCATTGCTTAACTGTCTC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAACATTCAAACTTATTCTaGCGAGGTCCTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKHSNLF*RGPSPM
Trigger: CATTGGTGAAGGACCTCGTCAGAATAAGTTTGAATG...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATACAAGGGCACTGTATaGATTTTAGAAAGGGGACTC +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKYKGTV*ILERGL
Trigger: GAGTCCCCTTTCTAAAATTCATACAGTGCCCTTGTA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGTTGGCTATCGCTTCTaGATACGTGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTVGYRF*IRDEEE
Trigger: CTCCTCTTCATCACGTATGCAGAAGCGATAGCCAAC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAAAAGAAAGTGGACGCTaGCATGTTGGCTATCGCTTC +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKKESGR*HVGYRF
Trigger: GAAGCGATAGCCAACATGCCAGCGTCCACTTTCTTT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ACGCTCTTTAAATGTCCCTGGAGTGATGATCAACCGATAAGCTATATATGTGGGACAAGGAATTTCTGTTaGTGTTTCTGGGGTAATACT +
Preference number: 4 (lower is better)
Translates to: TLFKCPWSDDQPISYICGTRNFC*CFWGNT
Trigger: AGTATTACCCCAGAAACACCAACAGAAATTCCTTGT...CCCACATATATAGCTTATCGGTTGATCATCACTCCAGGGACATTTAAAGAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR CCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAATCATCAGGCTTAGCTaGAAACTCATTCACTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKIIRLS*KLIHLE
Trigger: CTCCAAGTGAATGAGTTTCCAGCTAAGCCTGATGAT...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAACAATGTAAAAGGCAATaGTGCAGATGGCATAACCAA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKQCKRQ*CRWHNQ
Trigger: TTGGTTATGCCATCTGCATCATTGCCTTTTACATTG...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACAATGTAAAAGGCAATaGTGCAGATGGCATAACCAA +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKQCKRQ*CRWHNQ
Trigger: TTGGTTATGCCATCTGCATCATTGCCTTTTACATTG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAACTTCTGTTGCAAAGGTaGCTGTTTTTGAAACACCTA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKLLLQR*LFLKHL
Trigger: TAGGTGTTTCAAAAACAGTCACCTTTGCAACAGAAG...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACTTCAGTTACAGAATTaGAGGACTGATGCCATCTAT +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKLQLQN*RTDAIY
Trigger: ATAGATGGCATCAGTCCTTCAATTCTGTAACTGAAG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACAATTGATCTCTGGGTaGTTGGATTTGTGGATCACC +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKQLISG*LDLWIT
Trigger: GGTGATCCACAAATCCAAGCACCCAGAGATCAATTG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAATCCTCCATATTGAAATaGATCCATTTCGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKSSILK*IHFGGT
Trigger: AGTACCACCGAAATGGATGCATTTCAATATGGAGGA...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTGCACCCAGCCTCTTaGGTATTTCTTACTGATACA +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLHPAS*VFLTDT
Trigger: TGTATCAGTAAGAAATACCCAAGAGGCTGGGTGCAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCAGAACTCCGTTTTCCTaGCAATCTTCTCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTRTPFS*QSSPSS
Trigger: TGAAGATGGAGAAGATTGTCAGGAAAACGGAGTTCT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACTCTTGAAGAATTTTTaGGTCACTTTGAGGCGAATA +
Preference number: 4 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKLLKNF*VTLRRI
Trigger: TATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR GCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAACAGGATGTTTCCTCTaGTGTCTGGACCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKTGCFL*CLDLLF
Trigger: AAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACAATGTCTAAGTATGTaGGGTGGGGAGAATCCATAT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKQCLSM*GGENPY
Trigger: ATATGGATTCTCCCCACCCCACATACTTAGACATTG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
3UTR CAA 72 bp TCATACCAAGAAATGATACAGGAGACTTTCACAGACTaGATTCTAAACCTAATCCTAACTGATGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: SYQEMIQETFTD*ILNLILTDDRV
Trigger: CACCCTATCATCAGTTAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGGGCCTTATGTGAAATaGAAGGTGATTTACTTAGCT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKGPYVK*KVIYLA
Trigger: AGCTAAGTAAATCACCTTTCATTTCACATAAGGCCC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAATTTATACAGAGAACTaGAGTGATAGGTGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKIYTEN*SDRWPD
Trigger: ATCTGGCCACCTATCACTTCAGTTCTCTGTATAAAT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR TCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTTCAGTTACAGAATTaGAGGACTGATGCCATCTAT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLQLQN*RTDAIY
Trigger: ATAGATGGCATCAGTCCTTCAATTCTGTAACTGAAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR GCA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACTGCAAATATTAATTTaGTCCTCTACCTACGCCTCT +
Preference number: 4 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKLQILI*SSTYAS
Trigger: AGAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCCTCTTTAAATGTCCCTaGAGTGATGATCAACCGATA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTLFKCP*SDDQPI
Trigger: TATCGGTTGATCATCACTCCAGGGACATTTAAAGAG...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAATGGGCCCAAAATATTaGACTAGAGATAAGAATACA +
Preference number: 4 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKMGPKY*TRDKNT
Trigger: TGTATTCTTATCTCTAGTCCAATATTTTGGGCCCAT...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCACCTTAAAAATTATCTaGAGGGCTCACAATCGTGAC +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTTLKII*RAHNRD
Trigger: GTCACGATTGTGAGCCCTCCAGATAATTTTTAAGGT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CCA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCATGGGCCCAAAATATTaGACTAGAGATAAGAATACA +
Preference number: 4 (lower is better)
Translates to: MNSETFRSKQISDTNDHTMGPKY*TRDKNT
Trigger: TGTATTCTTATCTCTAGTCCAATATTTTGGGCCCAT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS TCA 90 bp CCCGGCGCTTGGCCCAGACGTGTGGGAACTCATCCAGCACAGCCGTaGTCACCCCCTCCAAGCCTGCAAACGTGCTGTCCAAGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: PGAWPRRVGTHPAQP*SPPPSLQTCCPSPA
Trigger: CGCTGGGCTTGGACAGCACGTTTGCAGGCTTGGAGGGGGTGATCACGGCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAGCGCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATCCCGCTGGATGGGGTaGCGCTCGCCAGGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRSRWMG*RSPGRG
Trigger: GCCCCTCCCTGGCGAGCGCAACCCCATCCAGCGGGA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS GCA 90 bp GAACCAAGACACAGCGACTGCTTCGATCAGCGCGACAGTGAGCACTaGGGGCCCCGTGGCATACTCCTCCAGCAGCTTCACCACGTAGGC +
Preference number: 5 (lower is better)
Translates to: EPRHSDCFDQRDSEH*GPRGILLQQLHHVG
Trigger: GCCTACGTGGTGAAGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 90 bp TGTTGCAGCAGCCCTACAGCTGCCCCTACAGTCGGGGCTGAAGCCTaGAGCTCCCACTTCAGCACAGGCCTCTGCCCAGGCAAAGAGACT +
Preference number: 5 (lower is better)
Translates to: CCSSPTAAPTVGAEA*SSHFSTGLCPGKET
Trigger: AGTCTCTTTGCCTGGGCAGAGGCCTGTGCTGAAGTGGGAGCTGCAGGCTTCAGCCCCGACTGTAGGGGCAGCTGTAGGGCTGCTGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578609.1
CDS-3UTR CAA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGTGCCCGGACTCCACTTaGTCCCCTGGGGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: WRGEGRRASSELEEEVVECPDST*SPGVGT
Trigger: TGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCA...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTGCCCGGACTCCACTTaGTCCCCTGGGGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWCPDST*SPGVGT
Trigger: TGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTNRSRR*AQTCGN
Trigger: GTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTG +
Preference number: 5 (lower is better)
Translates to: WRGEGRRASSELEEEVVEKWLEA*SLGTRL
Trigger: CAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTT...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS TCA 90 bp TGCCATAGAACCAAGACACAGCGACTGCTTCGATCAGCGCGACAGTaGGCACTGCGGGCCCCGTGGCATACTCCTCCAGCAGCTTCACCA +
Preference number: 5 (lower is better)
Translates to: CHRTKTQRLLRSARQ*ALRAPWHTPPAASP
Trigger: TGGTGAAGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGGTTCTATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTCCCGCTGGATGGGGTaGCGCTCGCCAGGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHSRWMG*RSPGRG
Trigger: GCCCCTCCCTGGCGAGCGCAACCCCATCCAGCGGGA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTCCGGCGCGGCCGTATTaGTACCCGCGGGCCCTCACA +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIPARPY*YPRALT
Trigger: TGTGAGGGCCCGCGGGTACAAATACGGCCGCGCCGG...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCTCCCGCACCAGGACTaGGAACTGCTGAGTACCCAT +
Preference number: 5 (lower is better)
Translates to: WRGEGRRASSELEEEVVELPHQD*ELLSTH
Trigger: ATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCTCCCGCACCAGGACTaGGAACTGCTGAGTACCCAT +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWLPHQD*ELLSTH
Trigger: ATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS TCA 90 bp GGCGCCGGCGCGGCCGTATTTGTACCCGCGGGCCCTCACATGGTCTaGTCTCTAGATAGCCGCCGCCAAAGAGCTCTTGAAGAATTTTTG +
Preference number: 5 (lower is better)
Translates to: GAGAAVFVPAGPHMV*SLDSRRQRALEEFL
Trigger: CAAAAATTCTTCAAGAGCTCTTTGGCGGCGGCTATCTAGAGATCAGACCATGTGAGGGCCCGCGGGTACAAATACGGCCGCGCCGGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGTCTGGGTGCTTGGATTaGTGGATCACCTCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWSGCLD*WITSEL
Trigger: GAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGA...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCTCCCGCACCAGGACTaGGAACTGCTGAGTACCCAT +
Preference number: 5 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRLPHQD*ELLSTH
Trigger: ATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLINRSRR*AQTCGN
Trigger: GTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTG +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTKWLEA*SLGTRL
Trigger: CAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCGGCGTTTCACTATGTaGGCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWRRFTM*AKLVSN
Trigger: GTTTGAGACCAGCTTGGCCAACATAGTGAAACGCCG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS GCA 90 bp CTTTCCACTTGCCAGCAACTCCTGTGGCTAAGCCCCTTGTTATTCTaGAAGAGAGGGCAAGCAAGGTCGCCTTGCCTCCAGGAGACCTGC +
Preference number: 5 (lower is better)
Translates to: LSTCQQLLWLSPLLF*KRGQARSPCLQETC
Trigger: GCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCAAGTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS-3UTR CAA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGGTACCCATTGGATATTaGCCCGGACTCCACTTTGTC +
Preference number: 5 (lower is better)
Translates to: WRGEGRRASSELEEEVVEVPIGY*PGLHFV
Trigger: GACAAAGTGGAGTCCGGGCAAATATCCAATGGGTAC...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCTGGGACCTGCGTCTTaGGCCACCTCAGACACATCT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTLGPAS*ATSDTS
Trigger: AGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCAG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGACTGGGACCTGCGTCTTaGGCCACCTCAGACACATCT +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRLGPAS*ATSDTS
Trigger: AGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCAG...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAATGCAGTGGAACGTTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRNAVER*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCATT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS TCA 90 bp GATAGAGTGCCGTGTGTCATCTCCCGCACCAGGACTTGGAACTGCTaGGTACCCATTGGATATTTGCCCGGACTCCACTTTGTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: DRVPCVISRTRTWNC*VPIGYLPGLHFVPW
Trigger: CCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGATGACACACGGCACTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 90 bp TCTCCCGCACCAGGACTTGGAACTGCTGAGTACCCATTGGATATTTaGCCGGACTCCACTTTGTCCCCTGGGGTGGGAACAACCTTCTGT +
Preference number: 5 (lower is better)
Translates to: SPAPGLGTAEYPLDI*PDSTLSPGVGTTFC
Trigger: ACAGAAGGTTGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 90 bp GTGTGTCATCTCCCGCACCAGGACTTGGAACTGCTGAGTACCCATTaGATATTTGCCCGGACTCCACTTTGTCCCCTGGGGTGGGAACAA +
Preference number: 5 (lower is better)
Translates to: VCHLPHQDLELLSTH*IFARTPLCPLGWEQ
Trigger: TTGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGATGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAACCGGCGCGGCCGTATTaGTACCCGCGGGCCCTCACA +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEPARPY*YPRALT
Trigger: TGTGAGGGCCCGCGGGTACAAATACGGCCGCGCCGG...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTGCAAGCAAGGTCGCCTaGCCTCCAGGAGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: PTALGVKMPWFRLGCQICASKVA*PPGDLP
Trigger: TGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTGC...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATCTGGGTGCTTGGATTaGTGGATCACCTCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRSGCLD*WITSEL
Trigger: GAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGA...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGCTTGGTCCCCAGGTTaGTCTCTGCCTCTAATGGCA +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRAWSPG*SLPLMA
Trigger: TGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCTGTGGCTAAGCCCCTaGTTATTCTGCAAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTLWLSP*LFCKRG
Trigger: CCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAACTGCTGAGTACCCATaGGATATTTGCCCGGACTCC +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRTAEYP*DICPDS
Trigger: GGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSENRSRR*AQTCGN
Trigger: GTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTG +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHKWLEA*SLGTRL
Trigger: CAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS CCA 90 bp TCCATCTGCCAAGGATCCCAATTGATCTCTGGGTGCTTGGATTTGTaGATCACCTCCGAGCTCTCTATCGTCGGGATTGACACGTCGGGA +
Preference number: 5 (lower is better)
Translates to: SICQGSQLISGCLDL*ITSELSIVGIDTSG
Trigger: TCCCGACGTGTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTCGGGATTGACTCATTaGTTCTTCTTTCCACTTGCC +
Preference number: 5 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRSGLTH*FFFPLA
Trigger: GGCAAGTGGAAAGAAGAACAAATGAGTCAATCCCGA...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCTGCCAAGGATCCCAATaGATCTCTGGGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTCQGSQ*ISGCLD
Trigger: ATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCA...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAGTACCCATTGGATATTaGCCCGGACTCCACTTTGTC +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRVPIGY*PGLHFV
Trigger: GACAAAGTGGAGTCCGGGCAAATATCCAATGGGTAC...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGTACCCATTGGATATTaGCCCGGACTCCACTTTGTC +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTVPIGY*PGLHFV
Trigger: GACAAAGTGGAGTCCGGGCAAATATCCAATGGGTAC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCTTGCCAGAGGTCTaGACGCCTTTCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGTLPEV*TPFQML
Trigger: CAGCATCTGGAAAGGCGTCAAGACCTCTGGCAAGGT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACCTGGGACCTGCGTCTTaGGCCACCTCAGACACATCT +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHLGPAS*ATSDTS
Trigger: AGATGTGTCTGAGGTGGCCAAAGACGCAGGTCCCAG...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGTGGACGCTGGCATGTaGGCTATCGCTTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGVDAGM*AIASAY
Trigger: GTATGCAGAAGCGATAGCCAACATGCCAGCGTCCAC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ACGCTCTTTAAATGTCCCTGGAGTGATGATCAACCGATAAGCTATATATGTGGGAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: TLFKCPWSDDQPISYICGNRSRR*AQTCGN
Trigger: GTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTT...CCCACATATATAGCTTATCGGTTGATCATCACTCCAGGGACATTTAAAGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR CAA 90 bp TCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGAAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: SRGIHGNKWLEALSLGTRNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...TCTGGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp TGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGCACAGACTCACAAGCTaGCATGGACACACTATTTTT +
Preference number: 5 (lower is better)
Translates to: WRGEGRRASSELEEEVVEHRLTS*HGHTIF
Trigger: AAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGTG...CTCCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGCACAGACTCACAAGCTaGCATGGACACACTATTTTT +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWHRLTS*HGHTIF
Trigger: AAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGTG...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGTTGTGGAGATTCTGTGAGGTGTaGGTAAGAGAAATACCACCT +
Preference number: 5 (lower is better)
Translates to: LGGEKAGVPHQNWRRRLWRFCEV*VREIPP
Trigger: AGGTGGTATTTCTCTTACCAACACCTCACAGAATCT...CCACAACCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS TCA 90 bp GCGTGTAAAATTCTTCAGCAGGGGACGTGGAATGGAGGGTCCAGGTaGTGTTGTCCTCGGAGAAGTAATTGGTGCAGTTGCCAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: ACKILQQGTWNGGSR*CCPRRSNWCSCQCS
Trigger: GGAACACTGGCAACTGCACCAATTACTTCTCCGAGGACAACATCACCTGGACCCTCCATTCCACGTCCCCTGCTGAAGAATTTTACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGCCGCCAAAGAGCTCTaGAAGAATTTTTGCGTCACT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTAAKEL*KNFCVT
Trigger: AGTGACGCAAAAATTCTTCAAGAGCTCTTTGGCGGC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGCACAGACTCACAAGCTaGCATGGACACACTATTTTT +
Preference number: 5 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRHRLTS*HGHTIF
Trigger: AAAAATAGTGTGTCCATGCAAGCTTGTGAGTCTGTG...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACTACAGGTGTGAGCCATaGTGCCTGGTGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHYRCEP*CLVERV
Trigger: TACCCTCTCCACCAGGCACAATGGCTCACACCTGTA...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGTCACCCACACCACCTaGCCAGAGGTCTTGACGCCT +
Preference number: 5 (lower is better)
Translates to: NREISLVPRFVSASNGIIVTHTT*PEVLTP
Trigger: AGGCGTCAAGACCTCTGGCAAGGTGGTGTGGGTGAC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGGTCACCAGGGCATCTaGGTAGCAGTTGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIGHQGI*VAVVVE
Trigger: TTCAACAACAACTGCTACCAAGATGCCCTGGTGACC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGGTCACCAGGGCATCTaGGTAGCAGTTGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGGHQGI*VAVVVE
Trigger: TTCAACAACAACTGCTACCAAGATGCCCTGGTGACC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLINWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCGCTGCAAATATTAATTaGCTCCTCTACCTACGCCTC +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTAANIN*LLYLRL
Trigger: GAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGC...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACAATGCAGTGGAACGTTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHNAVER*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCATT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS GCA 90 bp ATGACACTGATGTCCATCTGCCAAGGATCCCAATTGATCTCTGGGTaGTTGGATTTGTGGATCACCTCCGAGCTCTCTATCGTCGGGATT +
Preference number: 5 (lower is better)
Translates to: MTLMSICQGSQLISG*LDLWITSELSIVGI
Trigger: AATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACATCAGTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 90 bp ACGCTGATAGCTGCTTCTGAGAATTCAAGGGCGTCGTCTCCATCCTaGTGGTTAGTAAATGACACTGATGTCCATCTGCCAAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: TLIAASENSRASSPS*WLVNDTDVHLPRIP
Trigger: TGGGATCCTTGGCAGATGGACATCAGTGTCATTTACTAACCAGCAGGATGGAGACGACGCCCTTGAATTCTCAGAAGCAGCTATCAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 90 bp GGGATTGACTCATTTGTTCTTCTTTCCACTTGCCAGCAACTCCTGTaGCTAAGCCCCTTGTTATTCTGCAAGAGAGGGCAAGCAAGGTCG +
Preference number: 5 (lower is better)
Translates to: GIDSFVLLSTCQQLL*LSPLLFCKRGQARS
Trigger: CGACCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCAAGTGGAAAGAAGAACAAATGAGTCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS CCA 90 bp GTAAATGACACTGATGTCCATCTGCCAAGGATCCCAATTGATCTCTaGGTGCTTGGATTTGTGGATCACCTCCGAGCTCTCTATCGTCGG +
Preference number: 5 (lower is better)
Translates to: VNDTDVHLPRIPIDL*VLGFVDHLRALYRR
Trigger: CCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACATCAGTGTCATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CATTCACTTGGAGGGGAGAAGGCAGGCGTGCCTCATCAGAACTGGAGGAGGAGGAGATTTTCCTCCATATaGAAATGCATCCATTTCGGT +
Preference number: 5 (lower is better)
Translates to: HSLGGEKAGVPHQNWRRRRFSSI*KCIHFG
Trigger: ACCGAAATGGATGCATTTCAATATGGAGGAAAATCT...CCTCCTCCTCCAGTTCTGATGAGGCACGCCTGCCTTCTCCCCTCCAAGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTCGGTGAGTGTGTTACACAGCATTCAAGCGGATGTCCCCACAAGGAATTTCTGAACTGGAGGAGGAGGTaGTGGAGAAGCCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGECVTQHSSGCPHKEFLNWRRR*WRSLFP
Trigger: AGGAAAAAGGCTTCTCCACAACCTCCTCCTCCAGTT...CAGAAATTCCTTGTGGGGACATCCGCTTGAATGCTGTGTAACACACTCACCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579221.5
CDS-3UTR CAA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATACCTTGCCAGAGGTCTaGACGCCTTTCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KYLARRSKESEIAGHGENTLPEV*TPFQML
Trigger: CAGCATCTGGAAAGGCGTCAAGACCTCTGGCAAGGT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGCTGCAAATATTAATTaGCTCCTCTACCTACGCCTC +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIAANIN*LLYLRL
Trigger: GAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTGAGGAAAACCTAGAATaGGACAGGATGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIEENLE*DRMFPL
Trigger: CAGAGGAAACATCCTGTCCAATTCTAGGTTTTCCTC...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGCTTGGTCCCCAGGTTaGTCTCTGCCTCTAATGGCA +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEAWSPG*SLPLMA
Trigger: TGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAATACAGGTGTGAGCCATaGTGCCTGGTGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEYRCEP*CLVERV
Trigger: TACCCTCTCCACCAGGCACAATGGCTCACACCTGTA...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGATTGACACGTCGGGATaGACTCTGCCAGGCTGCGCG +
Preference number: 5 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKIDTSG*TLPGCA
Trigger: CGCGCAGCCTGGCAGAGTCAATCCCGACGTGTCAAT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401766.6
CDS CCA 90 bp CTGATAGCTGCTTCTGAGAATTCAAGGGCGTCGTCTCCATCCTGCTaGTTAGTAAATGACACTGATGTCCATCTGCCAAGGATCCCAATT +
Preference number: 5 (lower is better)
Translates to: LIAASENSRASSPSC*LVNDTDVHLPRIPI
Trigger: AATTGGGATCCTTGGCAGATGGACATCAGTGTCATTTACTAACCAGCAGGATGGAGACGACGCCCTTGAATTCTCAGAAGCAGCTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACTGCTGAGTACCCATaGGATATTTGCCCGGACTCC +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSETAEYP*DICPDS
Trigger: GGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGT...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCAGATTTTCCTCCATATaGAAATGCATCCATTTCGGT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTRFSSI*KCIHFG
Trigger: ACCGAAATGGATGCATTTCAATATGGAGGAAAATCT...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGTCACCCACACCACCTaGCCAGAGGTCTTGACGCCT +
Preference number: 5 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKVTHTT*PEVLTP
Trigger: AGGCGTCAAGACCTCTGGCAAGGTGGTGTGGGTGAC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATCGGCGTTTCACTATGTaGGCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KYLARRSKESEIAGHGENRRFTM*AKLVSN
Trigger: GTTTGAGACCAGCTTGGCCAACATAGTGAAACGCCG...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATAATGCAGTGGAACGTTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: KYLARRSKESEIAGHGENNAVER*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAACGTTCCACTGCATT...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCAGATTCTGTGAGGTGTaGGTAAGAGAAATACCACCT +
Preference number: 5 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGRFCEV*VREIPP
Trigger: AGGTGGTATTTCTCTTACCAACACCTCACAGAATCT...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCACCCCTCACCAAATATTTTaGTTTGGACTGTCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: MSRGIHGNKWLEALSLGTPHQIF*FGLSVF
Trigger: AAACACTGACAGTCCAAACAAAAATATTTGGTGAGG...GGTGCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACGCTCTTGAAGAATTTTaGCGTCACTTTGAGGCGAAT +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHALEEF*RHFEAN
Trigger: ATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAGC...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGCAAGCAAGGTCGCCTaGCCTCCAGGAGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: MNSETFRSKQISDTNDHTASKVA*PPGDLP
Trigger: TGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTGC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTATTGACACGTCGGGATaGACTCATTTGTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIIDTSG*THLFFF
Trigger: AAAGAAGAACAAATGAGTCAATCCCGACGTGTCAAT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp AAGTATCTCGCTAGGAGAAGCAAAGAATCAGAAATAGCAGGGCATGGGGAGAATTGCCAAGGATCCCAATaGATCTCTGGGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: KYLARRSKESEIAGHGENCQGSQ*ISGCLD
Trigger: ATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCA...ATTCTCCCCATGCCCTGCTATTTCTGATTCTTTGCTTCTCCTAGCGAGATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAATGCCCGGACTCCACTTaGTCCCCTGGGGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKCPDST*SPGVGT
Trigger: TGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCA...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp TTTACCCTCCTCTCTTCACCGAGCAAAGCAACCTGGACAGTCAAACTCAGTCACATTGACACGTCGGGATaGACTCATTTGTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: FTLLSSPSKATWTVKLSHIDTSG*THLFFF
Trigger: AAAGAAGAACAAATGAGTCAATCCCGACGTGTCAAT...GTGACTGAGTTTGACTGTCCAGGTTGCTTTGCTCGGTGAAGAGAGGAGGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAATCTGGGTGCTTGGATTaGTGGATCACCTCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKSGCLD*WITSEL
Trigger: GAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGA...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGACTGCTGAGTACCCATaGGATATTTGCCCGGACTCC +
Preference number: 5 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKTAEYP*DICPDS
Trigger: GGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGT...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CTGTGTCCCTGTGGAGAAGGCCCTTCCATCATCAGGCTTAGCTGGAAACTCATTAGATTTTCCTCCATATaGAAATGCATCCATTTCGGT +
Preference number: 5 (lower is better)
Translates to: LCPCGEGPSIIRLSWKLIRFSSI*KCIHFG
Trigger: ACCGAAATGGATGCATTTCAATATGGAGGAAAATCT...AATGAGTTTCCAGCTAAGCCTGATGATGGAAGGGCCTTCTCCACAGGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGTCACCCACACCACCTaGCCAGAGGTCTTGACGCCT +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKVTHTT*PEVLTP
Trigger: AGGCGTCAAGACCTCTGGCAAGGTGGTGTGGGTGAC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGTGGACGCTGGCATGTaGGCTATCGCTTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKVDAGM*AIASAY
Trigger: GTATGCAGAAGCGATAGCCAACATGCCAGCGTCCAC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAAAGTGGCTGGAGGCCTaGAGTCTGGGCACCAGACTG +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKKWLEA*SLGTRL
Trigger: CAGTCTGGTGCCCAGACTCAAGGCCTCCAGCCACTT...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp AATATGTCCAGGGGAATCCATGGAAATAAGTGGCTGGAGGCCTTGAGTCTGGGCGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 5 (lower is better)
Translates to: NMSRGIHGNKWLEALSLGETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...GCCCAGACTCAAGGCCTCCAGCCACTTATTTCCATGGATTCCCCTGGACATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAACTGTGGCTAAGCCCCTaGTTATTCTGCAAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKLWLSP*LFCKRG
Trigger: CCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAG...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAACTGCTCTTGGAGTGAAGATGCCTTGGTTTAGGTTAGGGTGCCAGATCTGTGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 5 (lower is better)
Translates to: PTALGVKMPWFRLGCQICETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...ACAGATCTGGCACCCTAACCTAAACCAAGGCATCTTCACTCCAAGAGCAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGCTGCAAATATTAATTaGCTCCTCTACCTACGCCTC +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEAANIN*LLYLRL
Trigger: GAGGCGTAGGTAGAGGAGCAAATTAATATTTGCAGC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGAGGAAAACCTAGAATaGGACAGGATGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: NREISLVPRFVSASNGIIEENLE*DRMFPL
Trigger: CAGAGGAAACATCCTGTCCAATTCTAGGTTTTCCTC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCACCTTGCCAGAGGTCTaGACGCCTTTCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: MNSETFRSKQISDTNDHTTLPEV*TPFQML
Trigger: CAGCATCTGGAAAGGCGTCAAGACCTCTGGCAAGGT...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp GTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAACCTTTAGAAGCAAAGGTCACCAGGGCATCTaGGTAGCAGTTGTTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VLSYAVYVFMNSETFRSKGHQGI*VAVVVE
Trigger: TTCAACAACAACTGCTACCAAGATGCCCTGGTGACC...TTTGCTTCTAAAGGTTTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCGTGGACGCTGGCATGTaGGCTATCGCTTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: MNSETFRSKQISDTNDHTVDAGM*AIASAY
Trigger: GTATGCAGAAGCGATAGCCAACATGCCAGCGTCCAC...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCTACAGGTGTGAGCCATaGTGCCTGGTGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: MNSETFRSKQISDTNDHTYRCEP*CLVERV
Trigger: TACCCTCTCCACCAGGCACAATGGCTCACACCTGTA...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACCTAGAATTGGACAGGATGTTTCCTCTGCTGTCTGGACCTTCTTTTTATAAGTCGGGATTGACTCATTaGTTCTTCTTTCCACTTGCC +
Preference number: 5 (lower is better)
Translates to: NLELDRMFPLLSGPSFYKSGLTH*FFFPLA
Trigger: GGCAAGTGGAAAGAAGAACAAATGAGTCAATCCCGA...CTTATAAAAAGAAGGTCCAGACAGCAGAGGAAACATCCTGTCCAATTCTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACGGCGTTTCACTATGTaGGCCAAGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKRRFTM*AKLVSN
Trigger: GTTTGAGACCAGCTTGGCCAACATAGTGAAACGCCG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGAACAGTGAAACCTTTAGAAGCAAACAGATATCAGATACCAATGATCATACCTGCCAAGGATCCCAATaGATCTCTGGGTGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: MNSETFRSKQISDTNDHTCQGSQ*ISGCLD
Trigger: ATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCA...GGTATGATCATTGGTATCTGATATCTGTTTGCTTCTAAAGGTTTCACTGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CGAGATAGCATCCCTGTTCTCTCCTACGCAGTTTACGTATTCATGAACAGTGAAGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 5 (lower is better)
Translates to: RDSIPVLSYAVYVFMNSEETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...TTCACTGTTCATGAATACGTAAACTGCGTAGGAGAGAACAGGGATGCTATCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS-3UTR CAA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCGAGACTTTCACAGACTaGATTCTAAACCTAATCCTA +
Preference number: 5 (lower is better)
Translates to: NREISLVPRFVSASNGIIETFTD*ILNLIL
Trigger: TAGGATTAGGTTTAGAATCAAGTCTGTGAAAGTCTC...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp ATGTGGGGTGGGGAGAATCCATATCCGAATATCTTCATAAAGCAAGTTCTTAAAGAGGAAAACCTAGAATaGGACAGGATGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: MWGGENPYPNIFIKQVLKEENLE*DRMFPL
Trigger: CAGAGGAAACATCCTGTCCAATTCTAGGTTTTCCTC...TTTAAGAACTTGCTTTATGAAGATATTCGGATATGGATTCTCCCCACCCCACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp AACAGAGAAATTAGCTTGGTCCCCAGGTTTGTCTCTGCCTCTAATGGCATTATCCCTCACCAAATATTTTaGTTTGGACTGTCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: NREISLVPRFVSASNGIIPHQIF*FGLSVF
Trigger: AAACACTGACAGTCCAAACAAAAATATTTGGTGAGG...GATAATGCCATTAGAGGCAGAGACAAACCTGGGGACCAAGCTAATTTCTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAAGCTCTTGAAGAATTTTaGCGTCACTTTGAGGCGAAT +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKALEEF*RHFEAN
Trigger: ATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAGC...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS-3UTR CAA 90 bp CCAATGATCATACCAAGAAATGATACAGGAGACTTTCACAGACTTGATTCTAAACCTCACCAAATATTTTaGTTTGGACTGTCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PMIIPRNDTGDFHRLDSKPHQIF*FGLSVF
Trigger: AAACACTGACAGTCCAAACAAAAATATTTGGTGAGG...TTTAGAATCAAGTCTGTGAAAGTCTCCTGTATCATTTCTTGGTATGATCATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp AGCCCTACAGCTGCCCCTACAGTCGGGGCTGAAGCCTaGAGCTCCCACTTCAGCACAGGCCTCTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SPTAAPTVGAEA*SSHFSTGLCPG
Trigger: GCCTGGGCAGAGGCCTGTGCTGAAGTGGGAGCTGCAGGCTTCAGCCCCGACTGTAGGGGCAGCTGTAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578609.1
CDS CAA 72 bp GTGATGACCACGGCGAGCACGAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAACTCATCCAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: VMTTASTNRSRR*AQTCGNSSSTA
Trigger: GGCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTTCGTGCTCGCCGTGGTCATCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS TCA 72 bp TTGCAGCAGCCCTACAGCTGCCCCTACAGTCGGGGCTaGAGCCTGCAGCTCCCACTTCAGCACAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LQQPYSCPYSRG*SLQLPLQHRPL
Trigger: CAGAGGCCTGTGCTGAAGTGGGAGCTGCAGGCTTCAGCCCCGACTGTAGGGGCAGCTGTAGGGCTGCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578609.1
CDS GCA 72 bp CACAGCGACTGCTTCGATCAGCGCGACAGTGAGCACTaGGGGCCCCGTGGCATACTCCTCCAGCAGCTTCAC +
Preference number: 6 (lower is better)
Translates to: HSDCFDQRDSEH*GPRGILLQQLH
Trigger: GTGAAGCTGCTGGAGGAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCGAAGCAGTCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 90 bp AAGAAGCAGGTGATGACCACGGCGAGCACGAACCGCTCCCGGCGCTaGGCCCAGACGTGTGGGAACTCATCCAGCACAGCCGTGATCACC +
Preference number: 6 (lower is better)
Translates to: KKQVMTTASTNRSRR*AQTCGNSSSTAVIT
Trigger: GGTGATCACGGCTGTGCTGGATGAGTTCCCACACGTCTGGGCCAAGCGCCGGGAGCGGTTCGTGCTCGCCGTGGTCATCACCTGCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS TCA 72 bp ACCAAGACACAGCGACTGCTTCGATCAGCGCGACAGTaGGCACTGCGGGCCCCGTGGCATACTCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: TKTQRLLRSARQ*ALRAPWHTPPA
Trigger: TGCTGGAGGAGTATGCCACGGGGCCCGCAGTGCTCACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp TTGTTATTCTGCAAGAGAGGGCAAGCAAGGTCGCCTTaGCTCCAGGAGACCTGCCAGGCTGCGCGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LLFCKRGQARSP*LQETCQAARGG
Trigger: GCCTCCCCGCGCAGCCTGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS CAA 72 bp CTTGTTATTCTGCAAGAGAGGGCAAGCAAGGTCGCCTaGCCTCCAGGAGACCTGCCAGGCTGCGCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LVILQERASKVA*PPGDLPGCAGR
Trigger: CCTCCCCGCGCAGCCTGGCAGGTCTCCTGGAGGCAAGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS TCA 72 bp TGGCCCAGACGTGTGGGAACTCATCCAGCACAGCCGTaGTCACCCCCTCCAAGCCTGCAAACGTGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: WPRRVGTHPAQP*SPPPSLQTCCP
Trigger: TGGACAGCACGTTTGCAGGCTTGGAGGGGGTGATCACGGCTGTGCTGGATGAGTTCCCACACGTCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000579221.5
ENST00000650711.1
CDS TCA 72 bp TTTGTGGATCACCTCCGAGCTCTCTATCGTCGGGATTaGCACGTCGGGATTGACTCTGCCAGGCTGCGCGGG +
Preference number: 6 (lower is better)
Translates to: FVDHLRALYRRD*HVGIDSARLRG
Trigger: CCCGCGCAGCCTGGCAGAGTCAATCCCGACGTGTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401766.6
CDS GCA 72 bp TCAGCCACTAGGGTGGTGGTGGTCGCTGGGATAGAGTaGCGTGTGTCATCTCCCGCACCAGGACTTGGAACT +
Preference number: 6 (lower is better)
Translates to: SATRVVVVAGIE*RVSSPAPGLGT
Trigger: AGTTCCAAGTCCTGGTGCGGGAGATGACACACGGCACTCTATCCCAGCGACCACCACCACCCTAGTGGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp GCGGCCGTATTTGTACCCGCGGGCCCTCACATGGTCTaGTCTCTAGATAGCCGCCGCCAAAGAGCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: AAVFVPAGPHMV*SLDSRRQRALE
Trigger: TTCAAGAGCTCTTTGGCGGCGGCTATCTAGAGATCAGACCATGTGAGGGCCCGCGGGTACAAATACGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS GCA 72 bp GAACTGAGTGATGCCATAGAACCAAGACACAGCGACTaGTTCGATCAGCGCGACAGTGAGCACTGCGGGCCC +
Preference number: 6 (lower is better)
Translates to: ELSDAIEPRHSD*FDQRDSEHCGP
Trigger: GGGCCCGCAGTGCTCACTGTCGCGCTGATCGAAGCAGTCGCTGTGTCTTGGTTCTATGGCATCACTCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 72 bp CTCCCGCACCAGGACTTGGAACTGCTGAGTACCCATTaGATATTTGCCCGGACTCCACTTTGTCCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: LPHQDLELLSTH*IFARTPLCPLG
Trigger: CCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 90 bp CGTGTGTCATCTCCCGCACCAGGACTTGGAACTGCTGAGTACCCATaGGATATTTGCCCGGACTCCACTTTGTCCCCTGGGGTGGGAACA +
Preference number: 6 (lower is better)
Translates to: RVSSPAPGLGTAEYP*DICPDSTLSPGVGT
Trigger: TGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGATGACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp TGCCAGCAACTCCTGTGGCTAAGCCCCTTGTTATTCTaGAAGAGAGGGCAAGCAAGGTCGCCTTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: CQQLLWLSPLLF*KRGQARSPCLQ
Trigger: CTGGAGGCAAGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS CAA 72 bp TCTCCCGCACCAGGACTTGGAACTGCTGAGTACCCATaGGATATTTGCCCGGACTCCACTTTGTCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: SPAPGLGTAEYP*DICPDSTLSPG
Trigger: CCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp CCAGGACTTGGAACTGCTGAGTACCCATTGGATATTTaGCCGGACTCCACTTTGTCCCCTGGGGTGGGAACA +
Preference number: 6 (lower is better)
Translates to: PGLGTAEYPLDI*PDSTLSPGVGT
Trigger: TGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp CCGTGTGTCATCTCCCGCACCAGGACTTGGAACTGCTaGGTACCCATTGGATATTTGCCCGGACTCCACTTT +
Preference number: 6 (lower is better)
Translates to: PCVISRTRTWNC*VPIGYLPGLHF
Trigger: AAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGCAGTTCCAAGTCCTGGTGCGGGAGATGACACACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 72 bp CTTTCCACTTGCCAGCAACTCCTGTGGCTAAGCCCCTaGTTATTCTGCAAGAGAGGGCAAGCAAGGTCGCCT +
Preference number: 6 (lower is better)
Translates to: LSTCQQLLWLSP*LFCKRGQARSP
Trigger: AGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCAAGTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS TCA 72 bp ATTCTTCAGCAGGGGACGTGGAATGGAGGGTCCAGGTaGTGTTGTCCTCGGAGAAGTAATTGGTGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: ILQQGTWNGGSR*CCPRRSNWCSC
Trigger: GCAACTGCACCAATTACTTCTCCGAGGACAACATCACCTGGACCCTCCATTCCACGTCCCCTGCTGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 72 bp GCTGAGTACCCATTGGATATTTGCCCGGACTCCACTTaGTCCCCTGGGGTGGGAACAACCTTCTGTAGAACT +
Preference number: 6 (lower is better)
Translates to: AEYPLDICPDST*SPGVGTTFCRT
Trigger: AGTTCTACAGAAGGTTGTTCCCACCCCAGGGGACAAAGTGGAGTCCGGGCAAATATCCAATGGGTACTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 90 bp TTTGTTCTTCTTTCCACTTGCCAGCAACTCCTGTGGCTAAGCCCCTaGTTATTCTGCAAGAGAGGGCAAGCAAGGTCGCCTTGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FVLLSTCQQLLWLSP*LFCKRGQARSPCLQ
Trigger: CTGGAGGCAAGGCGACCTTGCTTGCCCTCTCTTGCAGAATAACAAGGGGCTTAGCCACAGGAGTTGCTGGCAAGTGGAAAGAAGAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS CAA 90 bp ATGTCCATCTGCCAAGGATCCCAATTGATCTCTGGGTGCTTGGATTaGTGGATCACCTCCGAGCTCTCTATCGTCGGGATTGACACGTCG +
Preference number: 6 (lower is better)
Translates to: MSICQGSQLISGCLD*WITSELSIVGIDTS
Trigger: CGACGTGTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 90 bp ACACTGATGTCCATCTGCCAAGGATCCCAATTGATCTCTGGGTGCTaGGATTTGTGGATCACCTCCGAGCTCTCTATCGTCGGGATTGAC +
Preference number: 6 (lower is better)
Translates to: TLMSICQGSQLISGC*DLWITSELSIVGID
Trigger: GTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACATCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 72 bp CAAGGATCCCAATTGATCTCTGGGTGCTTGGATTTGTaGATCACCTCCGAGCTCTCTATCGTCGGGATTGAC +
Preference number: 6 (lower is better)
Translates to: QGSQLISGCLDL*ITSELSIVGID
Trigger: GTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 72 bp ACTGATGTCCATCTGCCAAGGATCCCAATTGATCTCTaGGTGCTTGGATTTGTGGATCACCTCCGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: TDVHLPRIPIDL*VLGFVDHLRAL
Trigger: GAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 72 bp GCCGCCAAAGAGCTCTTGAAGAATTTTTGCGTCACTTaGAGGCGAATAAACTTAATGCTTCCCCGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: AAKELLKNFCVT*RRINLMLPRGR
Trigger: GCGGCCGCGGGGAAGCATTAAGTTTATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAGCTCTTTGGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS CAA 72 bp TGCCAAGGATCCCAATTGATCTCTGGGTGCTTGGATTaGTGGATCACCTCCGAGCTCTCTATCGTCGGGATT +
Preference number: 6 (lower is better)
Translates to: CQGSQLISGCLD*WITSELSIVGI
Trigger: AATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 72 bp TCCATCTGCCAAGGATCCCAATTGATCTCTGGGTGCTaGGATTTGTGGATCACCTCCGAGCTCTCTATCGTC +
Preference number: 6 (lower is better)
Translates to: SICQGSQLISGC*DLWITSELSIV
Trigger: GACGATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp CAATCTTCTCCATCTTCACACGCTGATAGCTGCTTCTaGGAATTCAAGGGCGTCGTCTCCATCCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: QSSPSSHADSCF*EFKGVVSILLV
Trigger: AACCAGCAGGATGGAGACGACGCCCTTGAATTCTCAGAAGCAGCTATCAGCGTGTGAAGATGGAGAAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp GGGGTGGGAACAACCTTCTGTAGAACTCCGTTTTCCTaGCAATCTTCTCCATCTTCACACGCTGATAGCTGC +
Preference number: 6 (lower is better)
Translates to: GVGTTFCRTPFS*QSSPSSHADSC
Trigger: GCAGCTATCAGCGTGTGAAGATGGAGAAGATTGTCAGGAAAACGGAGTTCTACAGAAGGTTGTTCCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp ATGTCCATCTGCCAAGGATCCCAATTGATCTCTGGGTaGTTGGATTTGTGGATCACCTCCGAGCTCTCTATC +
Preference number: 6 (lower is better)
Translates to: MSICQGSQLISG*LDLWITSELSI
Trigger: GATAGAGAGCTCGGAGGTGATCCACAAATCCAAGCACCCAGAGATCAATTGGGATCCTTGGCAGATGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS GCA 72 bp GCTGCTTCTGAGAATTCAAGGGCGTCGTCTCCATCCTaGTGGTTAGTAAATGACACTGATGTCCATCTGCCA +
Preference number: 6 (lower is better)
Translates to: AASENSRASSPS*WLVNDTDVHLP
Trigger: TGGCAGATGGACATCAGTGTCATTTACTAACCAGCAGGATGGAGACGACGCCCTTGAATTCTCAGAAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CCA 72 bp GCTTCTGAGAATTCAAGGGCGTCGTCTCCATCCTGCTaGTTAGTAAATGACACTGATGTCCATCTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: ASENSRASSPSC*LVNDTDVHLPR
Trigger: CCTTGGCAGATGGACATCAGTGTCATTTACTAACCAGCAGGATGGAGACGACGCCCTTGAATTCTCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 90 bp AACATCAGAAAGAAGATGATGGCAAAGAAAGTGGACGCTGGCATGTaGGCTATCGCTTCTGCATACGTGATGAAGAGGAGGCTGGGACCT +
Preference number: 6 (lower is better)
Translates to: NIRKKMMAKKVDAGM*AIASAYVMKRRLGP
Trigger: AGGTCCCAGCCTCCTCTTCATCACGTATGCAGAAGCGATAGCCAACATGCCAGCGTCCACTTTCTTTGCCATCATCTTCTTTCTGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp TTTGTGGATCACCTCCGAGCTCTCTATCGTCGGGATTaGCACGTCGGGATTGACTCATTTGTTCTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: FVDHLRALYRRD*HVGIDSFVLLS
Trigger: GGAAAGAAGAACAAATGAGTCAATCCCGACGTGTCAATCCCGACGATAGAGAGCTCGGAGGTGATCCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000650711.1
CDS CCA 72 bp CATCAGAAAGAAGATGATGGCAAAGAAAGTGGACGCTaGCATGTTGGCTATCGCTTCTGCATACGTGATGAA +
Preference number: 6 (lower is better)
Translates to: HQKEDDGKESGR*HVGYRFCIRDE
Trigger: TTCATCACGTATGCAGAAGCGATAGCCAACATGCCAGCGTCCACTTTCTTTGCCATCATCTTCTTTCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS TCA 72 bp AATCCCTTTGAAAATCGGGCAGATTTTCCTCCATATTaGAATGCATCCATTTCGGTGGTACTGTCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: NPFENRADFPPY*NASISVVLSQC
Trigger: GCACTGGGACAGTACCACCGAAATGGATGCATTTCAATATGGAGGAAAATCTGCCCGATTTTCAAAGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261707.7
ENST00000394821.2
ENST00000401766.6
ENST00000650711.1
CDS CAA 72 bp CTAGATAGCCGCCGCCAAAGAGCTCTTGAAGAATTTTaGCGTCACTTTGAGGCGAATAAACTTAATGCTTCC +
Preference number: 6 (lower is better)
Translates to: LDSRRQRALEEF*RHFEANKLNAS
Trigger: GGAAGCATTAAGTTTATTCGCCTCAAAGTGACGCAAAAATTCTTCAAGAGCTCTTTGGCGGCGGCTATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261707.7
ENST00000401766.6
CDS TCA 72 bp AAATTCCCAAGATGTGATATATCCTGGATTGAACTCTaGCACACAGAATTACCAACTTCTGTACCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: KFPRCDISWIEL*HTELPTSVPKL
Trigger: CAGCTTGGGTACAGAAGTTGGTAATTCTGTGTGTCAGAGTTCAATCCAGGATATATCACATCTTGGGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578609.1