RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000142319

Ensembl transcript IDs: ENST00000270349.12, ENST00000511750.1, ENST00000512002.2, ENST00000621716.2, ENST00000626610.1, ENST00000630314.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTaGACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGAC +
Preference number: 1 (lower is better)
Translates to: PWSPRPLAGDSHDWP*TAPALGQHVGRPTD
Trigger: GTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 90 bp TCCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTaGCCCTGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCC +
Preference number: 1 (lower is better)
Translates to: SSPWSPRPLAGDSHD*PCTAPALGQHVGRP
Trigger: GGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 90 bp AGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGTCCCTaGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGC +
Preference number: 1 (lower is better)
Translates to: SSQADGSHRALHSSP*SPRPLAGDSHDWPC
Trigger: GCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 90 bp AAGCCATCCTCTGTGCTAACTGCAGCTGCCTGGCAGTTCACAGGCTaGCGGCTCCCACCGAGCATTACACTCCAGTCCCTGGAGCCCACG +
Preference number: 1 (lower is better)
Translates to: KPSSVLTAAAWQFTG*RLPPSITLQSLEPT
Trigger: CGTGGGCTCCAGGGACTGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGCACAGAGGATGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 90 bp CCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATaGATTCAAACTATGGCATCCACTTTCCTGTCAGTGGCAGAGGGC +
Preference number: 1 (lower is better)
Translates to: PCPRAARRQAHRLEA*IQTMASTFLSVAEG
Trigger: GCCCTCTGCCACTGACAGGAAAGTGGATGCCATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTaGAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTC +
Preference number: 1 (lower is better)
Translates to: REPHTDSMKLDVFLP*RDNNGVDLAAQIYV
Trigger: GACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 90 bp AGACGTTTTTCTGCCCTGCAGGGACAACAACGGGGTGGACCTCGCTaGACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGAG +
Preference number: 1 (lower is better)
Translates to: RRFSALQGQQRGGPR*TDLRRYYSNTRHGE
Trigger: CTCGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 90 bp CATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTaGACGCTCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAA +
Preference number: 1 (lower is better)
Translates to: HPPMPLNRLCVQCVN*TLNLRPLLGATHRE
Trigger: TTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 90 bp GCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGAGGTaGGCTCCCGGCACGGAAAGGTGTAAACAGTCAGAAGAGAGGAGT +
Preference number: 1 (lower is better)
Translates to: AQIYVVITATQDTAR*APGTERCKQSEERS
Trigger: ACTCCTCTCTTCTGACTGTTTACACCTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 90 bp GACTGTGTGTGCAATGTGTCAACTGAACGCTCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTTGTGG +
Preference number: 1 (lower is better)
Translates to: DCVCNVSTERSIYGL*WEPRIGKGLCMNLW
Trigger: CCACAAATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATTGCACACACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 90 bp TTCAAACTATGGCATCCACTTTCCTGTCAGTGGCAGAGGGCAGTGTaGCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTATTG +
Preference number: 1 (lower is better)
Translates to: FKLWHPLSCQWQRAV*HGKQLLANILHSVL
Trigger: CAATACTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGGATGCCATAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 90 bp TGTGTGTGCAATGTGTCAACTGAACGCTCAATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTTGTGGTTT +
Preference number: 1 (lower is better)
Translates to: CVCNVSTERSIYGLC*EPRIGKGLCMNLWF
Trigger: AAACCACAAATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATTGCACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 90 bp ACTATGGCATCCACTTTCCTGTCAGTGGCAGAGGGCAGTGTGCCATaGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTATTGCTAAT +
Preference number: 1 (lower is better)
Translates to: TMASTFLSVAEGSVP*KAAFGQHPSLSIAN
Trigger: ATTAGCAATACTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGGATGCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 90 bp AATTTCCTGGTGAGACATACCAGGACCCCCATCCTCCAATGCCTCTaGACAGACTGTGTGTGCAATGTGTCAACTGAACGCTCAATTTAC +
Preference number: 1 (lower is better)
Translates to: NFLVRHTRTPILQCL*TDCVCNVSTERSIY
Trigger: GTAAATTGAGCGTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGGTCCTGGTATGTCTCACCAGGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATAGGCAGAGTGTGGTCTaGAGGCTGCCTGCATGGGGG +
Preference number: 2 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHRQSVV*RLPAWG
Trigger: CCCCCATGCAGGCAGCCTGCAGACCACACTCTGCCT...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATGCAGGCTGCCTGCATaGGGGCCCTGCATGCGTCCT +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPACRLPA*GPCMRP
Trigger: AGGACGCATGCAGGGCCCCCATGCAGGCAGCCTGCA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATCCACTTTCCTGTCAGTaGCAGAGGGCAGTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHPLSCQ*QRAVCH
Trigger: ATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGG...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCACAAGACACGGCGAGGTaGGCTCCCGGCACGGAAAGG +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPQDTAR*APGTER
Trigger: CCTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTG...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGG +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPASIYGL*WEPRIG
Trigger: CCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACAGGCAGAGTGTGGTCTaGAGGCTGCCTGCATGGGGG +
Preference number: 2 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYRQSVV*RLPAWG
Trigger: CCCCCATGCAGGCAGCCTGCAGACCACACTCTGCCT...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTaGAGGCATGAATTCAAACTATGGCATCCACTTTCCTGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: CTAPALGQHVGRPTD*RHEFKLWHPLSCQW
Trigger: CCACTGACAGGAAAGTGGATGCCATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAAACAGAATTTCCTGGTaGGACATACCAGGACCCCCA +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPANRISW*DIPGPP
Trigger: TGGGGGTCCTGGTATGTCTCACCAGGAAATTCTGTT...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAGCAGGCCCACCGACTTaGGGCATGAATTCAAACTAT +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAAGPPT*GMNSNY
Trigger: ATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGC...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCGGTCTGCAGGCTGCCTaGATGGGGGCCCTGCATGCG +
Preference number: 2 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGGLQAA*MGALHA
Trigger: CGCATGCAGGGCCCCCATGCAGGCAGCCTGCAGACC...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGGGACAACAACGGGGTaGACCTCGCTGCACAGATCT +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPGTTTG*TSLHRS
Trigger: AGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCATCTCCCATTGCAGGATaGCTTCCTGGGGTCTTCGTC +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPSPIAG*LPGVFV
Trigger: GACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGA...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCACACCGACTTGAGGCATaGATTCAAACTATGGCATCC +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAHRLEA*IQTMAS
Trigger: GGATGCCATAGTTTGAATTCATGCCTCAAGTCGGTG...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGACGTTTTTCTGCCCTaGAGGGACAACAACGGGGTG +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPDVFLP*RDNNGV
Trigger: CACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCGCCTGAGAACACAGTaGCCCTGGGGCAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQRLRTQ*PWGSLR
Trigger: TCTGAGGCTGCCCCAGGGGCACTGTGTTCTCAGGCG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGCCCTGCACGGCCCCTaGCCTCGGGCAGCACGTAGG +
Preference number: 2 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATALHGP*PRAARR
Trigger: CCTACGTGCTGCCCGAGGGCAGGGGCCGTGCAGGGC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGAGCCATGACTGGCCCTaGACGGCCCCTGCCCTCGGG +
Preference number: 2 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRSHDWP*TAPALG
Trigger: CCCGAGGGCAGGGGCCGTGCAGGGCCAGTCATGGCT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCATGCAGGATGACTTCCTaGGGTCTTCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPCRMTS*GLRLCS
Trigger: GGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCA...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAA +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPIYGLC*EPRIGK
Trigger: TTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAAT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAGAAATAAAATTCCAGTaGGGTCCCTTCCTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAEIKFQ*GPFLEV
Trigger: GACCTCCAGGAAGGGACCCCACTGGAATTTTATTTC...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATATCGTGATCCCCGCCTaGGAACACAGTGCCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNIVIPA*EHSAPG
Trigger: CCCAGGGGCACTGTGTTCTCAGGCGGGGATCACGAT...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGGGATTCTCAGCAGGTaGGTCTACAAGGATCGTGAT +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPGILSR*VYKDRD
Trigger: ATCACGATCCTTGTAGACGCACCTGCTGAGAATCCC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGCTCCATTTCACCTTCTaGACAGCTAAACCAAGCAGG +
Preference number: 2 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWLHFTF*TAKPSR
Trigger: CCTGCTTGGTTTAGCTGTGCAGAAGGTGAAATGGAG...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAATCCTCCAATGCCTCTaGACAGACTGTGTGTGCAAT +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPILQCL*TDCVCN
Trigger: ATTGCACACACAGTCTGTTCAGAGGCATTGGAGGAT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCGGGGTGGACCTCGCTaGACAGATCTACGTCGTTAT +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQRGGPR*TDLRRY
Trigger: ATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGCGCCTGAGAACACAGTaGCCCTGGGGCAGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRRLRTQ*PWGSLR
Trigger: TCTGAGGCTGCCCCAGGGGCACTGTGTTCTCAGGCG...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTGCAGGATGACTTCCTaGGGTCTTCGTCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSCRMTS*GLRLCS
Trigger: GGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACGAAATAAAATTCCAGTaGGGTCCCTTCCTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYEIKFQ*GPFLEV
Trigger: GACCTCCAGGAAGGGACCCCACTGGAATTTTATTTC...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTCTAGGAAGCTACTGTaGGCACGGGGATTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQSRKLL*ARGFSA
Trigger: TGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGA...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCACGGATACTGCATTCTTaGATTTGTTTTGATTCACAG +
Preference number: 2 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPARILHS*ICFDSQ
Trigger: CTGTGAATCAAAACAAATTCAAGAATGCAGTATCCG...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGTTGAAGAGTAGAAGTTaGCCTCCTTTCTCTCGAAAC +
Preference number: 2 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWLKSRS*PPFSRN
Trigger: GTTTCGAGAGAAAGGAGGGCAACTTCTACTCTTCAA...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGTTTTCAGTAGAGGTTaGAGAGTAGAAGTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKVFSRG*RVEVAL
Trigger: GAGGGCAACTTCTACTCTTCAACCTCTACTGAAAAC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCGTCTACAAGGATCGTaGTCCCCGCCTGAGAACACA +
Preference number: 2 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNRLQGS*SPPENT
Trigger: TGTGTTCTCAGGCGGGGATCACGATCCTTGTAGACG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGAACAGAATTTCCTGGTaGGACATACCAGGACCCCCA +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQNRISW*DIPGPP
Trigger: TGGGGGTCCTGGTATGTCTCACCAGGAAATTCTGTT...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAAAAAACTGTTGTTATTaGTGTGGCACGCACCTGAGA +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPKNCCY*CGTHLR
Trigger: TCTCAGGTGCGTGCCACATCAATAACAACAGTTTTT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGG +
Preference number: 2 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRSIYGL*WEPRIG
Trigger: CCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCACAGGCTCGCGGATACTaGATTCTTGAATTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPQARGY*ILEFVL
Trigger: CAAAACAAATTCAAGAATGCAGTATCCGCGAGCCTG...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGAAACTTAGATTTCCTTaGTTTGTTCGTGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWKLRFP*FVRVSP
Trigger: GGGAGAGACACGAACAAACCAAGGAAATCTAAGTTT...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAA +
Preference number: 2 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNIYGLC*EPRIGK
Trigger: TTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAAT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTCTAGGAAGCTACTGTaGGCACGGGGATTCTCAGCA +
Preference number: 2 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNSRKLL*ARGFSA
Trigger: TGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTTACACTCCAGTCCCTaGAGCCCACGTCCACTTGCA +
Preference number: 2 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRLHSSP*SPRPLA
Trigger: TGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACATCTCCCATTGCAGGATaGCTTCCTGGGGTCTTCGTC +
Preference number: 2 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATSPIAG*LPGVFV
Trigger: GACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGA...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGTCTACAAGGATCGTaGTCCCCGCCTGAGAACACA +
Preference number: 2 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATRLQGS*SPPENT
Trigger: TGTGTTCTCAGGCGGGGATCACGATCCTTGTAGACG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGGTGCAATGTGTCAACTaGACGCTCAATTTACGGCCT +
Preference number: 2 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRVQCVN*TLNLRP
Trigger: AGGCCGTAAATTGAGCGTTCAGTTGACACATTGCAC...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTTGAAGAGTAGAAGTTaGCCTCCTTTCTCTCGAAAC +
Preference number: 2 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGLKSRS*PPFSRN
Trigger: GTTTCGAGAGAAAGGAGGGCAACTTCTACTCTTCAA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGACCAAGCAGGACACTTaGCTTTTTAATATGGGCAAA +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQTKQDT*LFNMGK
Trigger: TTTGCCCATATTAAAAAGCCAAGTGTCCTGCTTGGT...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 90 bp AGTAGAAGTTGCCCTCCTTTCTCTCGAAACTTAGATTTCCTTGGTTaGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGGGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: SRSCPPFSRNLDFLG*FVSLPLQDDFLGSS
Trigger: CGAAGACCCCAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTTTCGAGAGAAAGGAGGGCAACTTCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTGTTTTCAGTAGAGGTTaGAGAGTAGAAGTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRVFSRG*RVEVAL
Trigger: GAGGGCAACTTCTACTCTTCAACCTCTACTGAAAAC...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR TCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCGGATACTGCATTCTTaGATTTGTTTTGATTCACAG +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQRILHS*ICFDSQ
Trigger: CTGTGAATCAAAACAAATTCAAGAATGCAGTATCCG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCAAACTTAGATTTCCTTaGTTTGTTCGTGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGKLRFP*FVRVSP
Trigger: GGGAGAGACACGAACAAACCAAGGAAATCTAAGTTT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCTTTGCATGAATTTGTaGTTTCCTCCATTTCACCTT +
Preference number: 2 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQLCMNL*FPPFHL
Trigger: AAGGTGAAATGGAGGAAACCACAAATTCATGCAAAG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACTGTTGTTATTGATGTaGCACGCACCTGAGAGAAAT +
Preference number: 2 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATLLLLM*HAPERN
Trigger: ATTTCTCTCAGGTGCGTGCCACATCAATAACAACAG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 90 bp GTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTATaGCTAATTATTCTTGTAAACAAAAACTGCAATATCAGCAAGCAG +
Preference number: 2 (lower is better)
Translates to: VCHGKQLLANILHSV*LIILVNKNCNISKQ
Trigger: CTGCTTGCTGATATTGCAGTTTTTGTTTACAAGAATAATTAGCAATACTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 72 bp GCTGACGGCTCCCACCGAGCATTACACTCCAGTCCCTaGAGCCCACGTCCACTTGCAGGGGACAGCCATGAC +
Preference number: 3 (lower is better)
Translates to: ADGSHRALHSSP*SPRPLAGDSHD
Trigger: GTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAATGCTCGGTGGGAGCCGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 72 bp CTCAGGCCGTTCCCTACACCGCAAGGACCCACAGGCTaGCTGAGTGGCAGTAGCCTGAGCTGGTTTCAAGGA +
Preference number: 3 (lower is better)
Translates to: LRPFPTPQGPTG*LSGSSLSWFQG
Trigger: TCCTTGAAACCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAACGGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 72 bp TCTGTGCTAACTGCAGCTGCCTGGCAGTTCACAGGCTaGCGGCTCCCACCGAGCATTACACTCCAGTCCCTG +
Preference number: 3 (lower is better)
Translates to: SVLTAAAWQFTG*RLPPSITLQSL
Trigger: CAGGGACTGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CAA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGGCAGGCCCACCGACTaGAGGCATGAATTCAAACTA +
Preference number: 3 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPGRPTD*RHEFKL
Trigger: TAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 72 bp CGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATaGATTCAAACTATGGCATCCACTTTCCTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: RAARRQAHRLEA*IQTMASTFLSV
Trigger: CACTGACAGGAAAGTGGATGCCATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 72 bp CACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTaGAGGGACAACAACGGGGTGGACCTCGCTGCACAG +
Preference number: 3 (lower is better)
Translates to: HTDSMKLDVFLP*RDNNGVDLAAQ
Trigger: CTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 72 bp CTGAATAGAGATTGGTCAACAGACACGGACAACACCTaGGTTGCTACACGGAGCCCCTCCCCAGAAGGCGAT +
Preference number: 3 (lower is better)
Translates to: LNRDWSTDTDNT*VATRSPSPEGD
Trigger: ATCGCCTTCTGGGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 72 bp TCTGCCCTGCAGGGACAACAACGGGGTGGACCTCGCTaGACAGATCTACGTCGTTATTACAGCAACACAAGA +
Preference number: 3 (lower is better)
Translates to: SALQGQQRGGPR*TDLRRYYSNTR
Trigger: TCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTGCAGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 72 bp ATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTaGACGCTCAATTTACGGCCTCTGCTGGGAGCCACG +
Preference number: 3 (lower is better)
Translates to: MPLNRLCVQCVN*TLNLRPLLGAT
Trigger: CGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 72 bp GTGAGACATACCAGGACCCCCATCCTCCAATGCCTCTaGACAGACTGTGTGTGCAATGTGTCAACTGAACGC +
Preference number: 3 (lower is better)
Translates to: VRHTRTPILQCL*TDCVCNVSTER
Trigger: GCGTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGGTCCTGGTATGTCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 72 bp TACGTCGTTATTACAGCAACACAAGACACGGCGAGGTaGGCTCCCGGCACGGAAAGGTGTAAACAGTCAGAA +
Preference number: 3 (lower is better)
Translates to: YVVITATQDTAR*APGTERCKQSE
Trigger: TTCTGACTGTTTACACCTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR GCA 72 bp TGCAATGTGTCAACTGAACGCTCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGGAAAGGACTTTGCATG +
Preference number: 3 (lower is better)
Translates to: CNVSTERSIYGL*WEPRIGKGLCM
Trigger: CATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 72 bp TCCACTTTCCTGTCAGTGGCAGAGGGCAGTGTGCCATaGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGT +
Preference number: 3 (lower is better)
Translates to: STFLSVAEGSVP*KAAFGQHPSLS
Trigger: ACTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CAA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGGCAGGCCCACCGACTaGAGGCATGAATTCAAACTA +
Preference number: 3 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATGRPTD*RHEFKL
Trigger: TAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 72 bp AATGTGTCAACTGAACGCTCAATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAAGGACTTTGCATGAAT +
Preference number: 3 (lower is better)
Translates to: NVSTERSIYGLC*EPRIGKGLCMN
Trigger: ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGAGCGTTCAGTTGACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CCA 72 bp TTGTGCTTAGGGACCCACACGATGCTGAATAGAGATTaGTCAACAGACACGGACAACACCTGGGTTGCTACA +
Preference number: 3 (lower is better)
Translates to: LCLGTHTMLNRD*STDTDNTWVAT
Trigger: TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGTGTGGGTCCCTAAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CAA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACATGGAAAGCAGCTTTaGGCCAACATCCTTCACTCA +
Preference number: 3 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATHGKQL*ANILHS
Trigger: TGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CAA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTTAGATTTCCTTGGTTaGTTCGTGTCTCTCCCATTG +
Preference number: 3 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRLDFLG*FVSLPL
Trigger: CAATGGGAGAGACACGAACAAACCAAGGAAATCTAA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR-3UTR CAA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACATCGGGAAAGGACTTaGCATGAATTTGTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATHRERT*HEFVVS
Trigger: GGAAACCACAAATTCATGCAAAGTCCTTTCCCGATG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR TCA 72 bp CAATATCAGCAAGCAGGCTCGCGGATACTGCATTCTTaGATTTGTTTTGATTCACAGGTAAATATGATTTTA +
Preference number: 3 (lower is better)
Translates to: QYQQAGSRILHS*ICFDSQVNMIL
Trigger: TAAAATCATATTTACCTGTGAATCAAAACAAATTCAAGAATGCAGTATCCGCGAGCCTGCTTGCTGATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATGCCCTGGCCCGTCCTTaGCCACGTCCCCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHALARP*PRPRWA
Trigger: TGCCCATCGGGGACGTGGCCAAGGACGGGCCAGGGC...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCACCCGGGCCTGGGCTTTaGACGCGAGTCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAPGPGL*TRVLAP
Trigger: CGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGG...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATAGGTCGTCGATGCCATaGCTCTGGTGGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHRSSMP*LWWRCS
Trigger: GCTGCACCTCCACCAGAGCCATGGCATCGACGACCT...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGGGGGACAGCCATGACTaGCCCTGCACGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWGDSHD*PCTAPA
Trigger: GGCAGGGGCCGTGCAGGGCCAGTCATGGCTGTCCCC...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATCCACCACGGAAGACATaGGTCCCACGGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHPPRKT*VPRSIC
Trigger: GCAAATGCTCCGTGGGACTCATGTCTTCCGTGGTGG...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGCACCAGGCAGGCTGTaGGCTGCCACCGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKAPGRL*AATAEA
Trigger: GGCCTCCGCGGTGGCAGCTCACAGCCTGCCTGGTGC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTGCAGGGGACAGCCATaGCTGGCCCTGCACGGCCCC +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYCRGQP*LALHGP
Trigger: GGGGCCGTGCAGGGCCAGTCATGGCTGTCCCCTGCA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAGCCCCAGGTCGTCGATaGCATGGCTCTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAAPGRR*HGSGGG
Trigger: ACCTCCACCAGAGCCATGGCATCGACGACCTGGGGC...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGCCCTGCACGGCCCCTaGCCTCGGGCAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKALHGP*PRAARR
Trigger: CCTACGTGCTGCCCGAGGGCAGGGGCCGTGCAGGGC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 72 bp GAGCATTACACTCCAGTCCCTGGAGCCCACGTCCACTaGCAGGGGACAGCCATGACTGGCCCTGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: EHYTPVPGAHVH*QGTAMTGPARP
Trigger: GGGCCGTGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAATGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGACCACGGCCCAGGCTaGGGACAGAGGGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKDHGPG*GQRERG
Trigger: GCCACGCTCCCTCTGTCCTCAGCCTGGGCCGTGGTC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGTGCAGGGGACAGCCATaGCTGGCCCTGCACGGCCCC +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKCRGQP*LALHGP
Trigger: GGGGCCGTGCAGGGCCAGTCATGGCTGTCCCCTGCA...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGAGGCAGGCTGTGAGCTaGCACCGCGGAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKRQAVS*HRGGPR
Trigger: CCTGGGGCCTCCGCGGTGGCAGCTCACAGCCTGCCT...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCACTGGAGTCACCAGGATaGGCATCCGAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPALESPG*ASEQLG
Trigger: CCCCAACTGCTCGGATGCCCATCCTGGTGACTCCAG...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATGGCCACGTCCCCGATaGGCACACTGTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAWPRPR*AHCASV
Trigger: CACAGAAGCACAGTGTGCCCATCGGGGACGTGGCCA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGCCGCCAGTACAGGCTaGGCCGCTGCCCGGTCATCT +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPAASTG*AAARSS
Trigger: AGATGACCGGGCAGCGGCCCAGCCTGTACTGGCGGC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATACACCTTGAGCCAGTaGCGGAGCGTGAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAYTLSQ*RSVNWR
Trigger: GCGCCAGTTCACGCTCCGCCACTGGCTCAAGGTGTA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCCCCGGGCCTGGGCTTTaGACGCGAGTCCTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSPGPGL*TRVLAP
Trigger: CGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGG...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATGGCTCTGGTGGAGGTaGAGCACGCCACGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAWLWWR*STPRSK
Trigger: CTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTTTGCACGCGAGTCCTaGCGCCGAGAGCGTTCCGCG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYFARES*RRERSA
Trigger: CGCGGAACGCTCTCGGCGCCAGGACTCGCGTGCAAA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTGGCGGAGCGTGAACTaGCGCACCTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYWRSVN*RTSPLS
Trigger: GGACAGAGGGGAGGTGCGCCAGTTCACGCTCCGCCA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACAGAACACAGTGCCCCTaGGGCAGCCTCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYRTQCP*GSLRAG
Trigger: CCCGGCTCTGAGGCTGCCCCAGGGGCACTGTGTTCT...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATGAGGGCAGTGTGCCATaGAAAGCAGCTTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHEGSVP*KAAFGQ
Trigger: TTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTC...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGCACCAGGCAGGCTGTaGGCTGCCACCGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDAPGRL*AATAEA
Trigger: GGCCTCCGCGGTGGCAGCTCACAGCCTGCCTGGTGC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGCAGGAGCAGGGCAGTaGGGACCACGTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPAGAGQ*GPRMAW
Trigger: CCATGCCATACGTGGTCCTCACTGCCCTGCTCCTGC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACGCCCCAGGTCGTCGATaGCATGGCTCTGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYAPGRR*HGSGGG
Trigger: ACCTCCACCAGAGCCATGGCATCGACGACCTGGGGC...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPATVLLG*NGVGQF
Trigger: AAACTGGCCTACGCCATTGCACCCGAGAAGGACCGT...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGCAAGACACGGCGAGGTaGGCTCCCGGCACGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKQDTAR*APGTER
Trigger: CCTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTG...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGCAAGGACCCACAGGCTaGCTGAGTGGCAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWQGPTG*LSGSSL
Trigger: CAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTG...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCATGTGCTAACTGCAGCTaGCTGGCAGTTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPACANCS*LAVHRL
Trigger: CAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGCACA...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCTGGCCGCCCGGGCCTaGGCTTTGCACGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQLAARA*ALHASP
Trigger: AGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCCTGGCCGCCCGGGCCTaGGCTTTGCACGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSLAARA*ALHASP
Trigger: AGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAG...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGCCCTGGCCCGTCCTTaGCCACGTCCCCGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQALARP*PRPRWA
Trigger: TGCCCATCGGGGACGTGGCCAAGGACGGGCCAGGGC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGGACACGGACAACACCTaGGTTGCTACACGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWDTDNT*VATRSP
Trigger: GGGGCTCCGTGTAGCAACCCAGGTGTTGTCCGTGTC...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCGGCCCCTTCCCTGTTaGACTGGCCGAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQRPLPC*TGRGPA
Trigger: AGCTGGCCCTCGGCCAGTTCAACAGGGAAGGGGCCG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGCAGGAGCAGGGCAGTaGGGACCACGTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKAGAGQ*GPRMAW
Trigger: CCATGCCATACGTGGTCCTCACTGCCCTGCTCCTGC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGACCACGGCCCAGGCTaGGGACAGAGGGAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDDHGPG*GQRERG
Trigger: GCCACGCTCCCTCTGTCCTCAGCCTGGGCCGTGGTC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAAGCTGCACTCCGTTCTaGTCCTTGACAAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPASCTPF*SLTRMS
Trigger: GCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCT...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACCAAGGACCCACAGGCTaGCTGAGTGGCAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYQGPTG*LSGSSL
Trigger: CAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTG...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGGTCTGCAGGCTGCCTaGATGGGGGCCCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQGLQAA*MGALHA
Trigger: CGCATGCAGGGCCCCCATGCAGGCAGCCTGCAGACC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACGCCCTGCACGGCCCCTaGCCTCGGGCAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNALHGP*PRAARR
Trigger: CCTACGTGCTGCCCGAGGGCAGGGGCCGTGCAGGGC...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCAGCCATGACTGGCCCTaGACGGCCCCTGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGSHDWP*TAPALG
Trigger: CCCGAGGGCAGGGGCCGTGCAGGGCCAGTCATGGCT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACCTGGAGTCACCAGGATaGGCATCCGAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYLESPG*ASEQLG
Trigger: CCCCAACTGCTCGGATGCCCATCCTGGTGACTCCAG...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGAATGGTCCAGGAGCGTaGAGACGTAGATGCCACCGT +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWNGPGA*RRRCHR
Trigger: ACGGTGGCATCTACGTCTTCACGCTCCTGGACCATT...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTGGAGGATGTGGCGATaGCCCAGCCCAGCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSWRMWR*PSPARW
Trigger: CCAACGCGCTGGGCTGGGTCATCGCCACATCCTCCA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATGTTTTCAGTAGAGGTTaGAGAGTAGAAGTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHVFSRG*RVEVAL
Trigger: GAGGGCAACTTCTACTCTTCAACCTCTACTGAAAAC...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGTGGCAGTTCACAGGCTaGCGGCTCCCACCGAGCATT +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKWQFTG*RLPPSI
Trigger: AATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCA...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACAGGCAGGCTGTGAGCTaGCACCGCGGAGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNRQAVS*HRGGPR
Trigger: CCTGGGGCCTCCGCGGTGGCAGCTCACAGCCTGCCT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCAAGACACGGCGAGGTaGGCTCCCGGCACGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQQDTAR*APGTER
Trigger: CCTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGGACGTTTTTCTGCCCTaGAGGGACAACAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWDVFLP*RDNNGV
Trigger: CACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTC...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGTGTGGGGGCCCTGCATaGGTCCGGTCCGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTACGGPA*VRSGDR
Trigger: CCTATCCCCGGACCGGACGCATGCAGGGCCCCCACA...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACCAGGAGTTGTTGCAGTaGATCCAGGGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYQELLQ*IQGSSV
Trigger: CACGGAGCTCCCCTGGATCCACTGCAACAACTCCTG...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAACTCCATACCACCCATaGCGCTGTCGATACCCAGGG +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPTPYHP*RCRYPG
Trigger: CCCTGGGTATCGACAGCGCCATGGGTGGTATGGAGT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACGGGACAACAACGGGGTaGACCTCGCTGCACAGATCT +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYGTTTG*TSLHRS
Trigger: AGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCC...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTGCAGGCTGCCTGCATaGGGGCCCTGCATGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQCRLPA*GPCMRP
Trigger: AGGACGCATGCAGGGCCCCCATGCAGGCAGCCTGCA...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCGGCCCCTTCCCTGTTaGACTGGCCGAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNRPLPC*TGRGPA
Trigger: AGCTGGCCCTCGGCCAGTTCAACAGGGAAGGGGCCG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGCTGGATGTCGTCGCTaGACTGCCCAACACCATAGA +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPAGCRR*TAQHHR
Trigger: TCTATGGTGTTGGGCAGTTCAGCGACGACATCCAGC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGTCTAGGAAGCTACTGTaGGCACGGGGATTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWSRKLL*ARGFSA
Trigger: TGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGA...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAAGCTCACGGTGTCTGTaGAGCAGCTGGAACTCATCG +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPSSRCL*SSWNSS
Trigger: CGATGAGTTCCAGCTGCTGCACAGACACCGTGAGCT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGCAAAGAGGATGGACGTaGCGGCTGCAAAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWQRGWT*RLQNGP
Trigger: TGGACCATTTTGCAGCCGGCACGTCCATCCTCTTTG...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGAGTGAGGACCACGTATaGCATGGTGGCTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWSEDHV*HGGCDP
Trigger: TGGATCACAGCCACCATGCCATACGTGGTCCTCACT...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCATGTCTGTGCAGCAGCTaGAACTCATCGATGAGCCCG +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPCLCSS*NSSMSP
Trigger: CGGGCTCATCGATGAGTTCCAGCTGCTGCACAGACA...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACGCCGCCAGTACAGGCTaGGCCGCTGCCCGGTCATCT +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNAASTG*AAARSS
Trigger: AGATGACCGGGCAGCGGCCCAGCCTGTACTGGCGGC...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACTGGCGGAGCGTGAACTaGCGCACCTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDWRSVN*RTSPLS
Trigger: GGACAGAGGGGAGGTGCGCCAGTTCACGCTCCGCCA...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTGCAGGATGACTTCCTaGGGTCTTCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYCRMTS*GLRLCS
Trigger: GGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGTCAACGCTCAGGTATaGTCTGATGCCGTCTATGGC +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPVNAQV*SDAVYG
Trigger: GCCATAGACGGCATCAGAGCATACCTGAGCGTTGAC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCACACACTGTGCTTCTGTaGCATGTACCCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPHTVLL*HVPQEG
Trigger: TCCTTCCTGGGGTACATGGCACAGAAGCACAGTGTG...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGGGGATTCTCAGCAGGTaGGTCTACAAGGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWGILSR*VYKDRD
Trigger: ATCACGATCCTTGTAGACGCACCTGCTGAGAATCCC...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTTGTGGGGGCCCTGCATaGGTCCGGTCCGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRCGGPA*VRSGDR
Trigger: CCTATCCCCGGACCGGACGCATGCAGGGCCCCCACA...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGGGTCTGCAGGCTGCCTaGATGGGGGCCCTGCATGCG +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRGLQAA*MGALHA
Trigger: CGCATGCAGGGCCCCCATGCAGGCAGCCTGCAGACC...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAAGCCATGACTGGCCCTaGACGGCCCCTGCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATSHDWP*TAPALG
Trigger: CCCGAGGGCAGGGGCCGTGCAGGGCCAGTCATGGCT...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACATCCTCTGTGCTAACTaGAGCTGCCTGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYILCAN*SCLAVH
Trigger: GTGAACTGCCAGGCAGCTGCAGTTAGCACAGAGGAT...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTTTGCACGCGAGTCCTaGCGCCGAGAGCGTTCCGCG +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNFARES*RRERSA
Trigger: CGCGGAACGCTCTCGGCGCCAGGACTCGCGTGCAAA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTCTTCCCTCTTGGTCTaGCCGCCCGGGCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNSSLLV*PPGPGL
Trigger: AAGCCCAGGCCCGGGCGGCCAGACCAAGAGGGAAGA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCCTTCCCTGTTGAACTaGCCGAGGGCCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQPSLLN*PRASSM
Trigger: CATGGAGCTGGCCCTCGGCCAGTTCAACAGGGAAGG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGCCACACCTTTCAGTATaGGGCAGATCTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWPHLSV*GRSSRH
Trigger: GTGTCTGGAAGATCTGCCCCATACTGAAAGGTGTGG...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGAGGTCGTCGATGCCATaGCTCTGGTGGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQRSSMP*LWWRCS
Trigger: GCTGCACCTCCACCAGAGCCATGGCATCGACGACCT...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGAGAAGCACACCTGGGTaGCCGCGTCAATCCAAACAG +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKRSTPG*PRQSKQ
Trigger: CTGTTTGGATTGACGCGGCCACCCAGGTGTGCTTCT...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGATGAAGATCAGCCCTaGCCCGTCCTTGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQDEDQP*PVLGHV
Trigger: GACGTGGCCAAGGACGGGCCAGGGCTGATCTTCATC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAGGACAGAGGGAGCGTaGCGATGGCTTCCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSRTEGA*RWLPGR
Trigger: TCTACCCGGAAGCCATCGCCACGCTCCCTCTGTCCT...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCCCAGCCCAGCGCGTTaGCCCAGTCGGGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNPSPAR*PSRGRC
Trigger: ACATCTTCCCCGACTGGGCCAACGCGCTGGGCTGGG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGTGCAGGATGACTTCCTaGGGTCTTCGTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKCRMTS*GLRLCS
Trigger: GGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCA...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACAGAACACAGTGCCCCTaGGGCAGCCTCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNRTQCP*GSLRAG
Trigger: CCCGGCTCTGAGGCTGCCCCAGGGGCACTGTGTTCT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAA +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKIYGLC*EPRIGK
Trigger: TTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAAT...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGGGGACAGCCATGACTaGCCCTGCACGGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATGDSHD*PCTAPA
Trigger: GGCAGGGGCCGTGCAGGGCCAGTCATGGCTGTCCCC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 72 bp ATAGAGATTGGTCAACAGACACGGACAACACCTGGGTaGCTACACGGAGCCCCTCCCCAGAAGGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: IEIGQQTRTTPG*LHGAPPQKAMG
Trigger: CCCCATCGCCTTCTGGGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGAGCCCGGTGATCACTaGCTCCATACCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDEPGDH*LHTTHG
Trigger: GCCATGGGTGGTATGGAGTCAGTGATCACCGGGCTC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAGATGCCACCGTTGGTaGCGCAGAACAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSRCHRW*RRTGTG
Trigger: TCCTGTCCCTGTTCTGCGTCACCAACGGTGGCATCT...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACATCGTGATCCCCGCCTaGGAACACAGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNIVIPA*EHSAPG
Trigger: CCCAGGGGCACTGTGTTCTCAGGCGGGGATCACGAT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGTCTAGGAAGCTACTGTaGGCACGGGGATTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKSRKLL*ARGFSA
Trigger: TGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGA...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGATCCTCCAATGCCTCTaGACAGACTGTGTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWILQCL*TDCVCN
Trigger: ATTGCACACACAGTCTGTTCAGAGGCATTGGAGGAT...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGCAGGCCCACCGACTTaGGGCATGAATTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPAGPPT*GMNSNY
Trigger: ATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGTGGAGCTGGTGAGCTaGACTCCGTTCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQVELVS*TPFCSL
Trigger: CAAGGAGCAGAACGGAGTGCAGCTCACCAGCTCCAC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCCCGATGGGCACACTGTaGTTCTGTGCCATGTACCCC +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSPMGTL*FCAMYP
Trigger: GGGGTACATGGCACAGAAGCACAGTGTGCCCATCGG...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACCGCTGCCCGGTCATCTaGTGGATGTCGTCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDRCPVI*WMSSLN
Trigger: GTTCAGCGACGACATCCAGCAGATGACCGGGCAGCG...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACTACAGGCTGGGCCGCTaGCCGGTCATCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNYRLGR*PVICWM
Trigger: CATCCAGCAGATGACCGGGCAGCGGCCCAGCCTGTA...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCGCCTGAGAACACAGTaGCCCTGGGGCAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNRLRTQ*PWGSLR
Trigger: TCTGAGGCTGCCCCAGGGGCACTGTGTTCTCAGGCG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATCTTGTAAACAAAAACTaGAATATCAGCAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHLVNKN*NISKQA
Trigger: AGCCTGCTTGCTGATATTGCAGTTTTTGTTTACAAG...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACGGACAACACCTGGGTTaGTACACGGAGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNGQHLG*YTEPLP
Trigger: GGGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCC...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGGTGCTTCTTCCCTCTTaGTCTGGCCGCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRVLLPS*SGRPGL
Trigger: CAGGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCAC...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGCCTTCCCTGTTGAACTaGCCGAGGGCCAGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTAPSLLN*PRASSM
Trigger: CATGGAGCTGGCCCTCGGCCAGTTCAACAGGGAAGG...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACATGCCATGGCTCTGGTaGAGGTGCAGCACGCCACGT +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDMPWLW*RCSTPR
Trigger: ACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCAT...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACTCGATGCCATGGCTCTaGTGGAGGTGCAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDSMPWL*WRCSTP
Trigger: TGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGA...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCGTGCCGGCTGCAAAATaGTCCAGGAGCGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSVPAAK*SRSVKT
Trigger: CGTCTTCACGCTCCTGGACCATTTTGCAGCCGGCAC...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTCCCAGCCCAGCGCGTTaGCCCAGTCGGGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRPSPAR*PSRGRC
Trigger: ACATCTTCCCCGACTGGGCCAACGCGCTGGGCTGGG...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTGTAGGCCGCATAGATaGGCACCATGGCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSCRPHR*APWPWR
Trigger: CCTCCATGGCCATGGTGCCCATCTATGCGGCCTACA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTACACCTTGAGCCAGTaGCGGAGCGTGAACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGYTLSQ*RSVNWR
Trigger: GCGCCAGTTCACGCTCCGCCACTGGCTCAAGGTGTA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTGCAGGCTGCCTGCATaGGGGCCCTGCATGCGTCCT +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRCRLPA*GPCMRP
Trigger: AGGACGCATGCAGGGCCCCCATGCAGGCAGCCTGCA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGACACGGACAACACCTaGGTTGCTACACGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDDTDNT*VATRSP
Trigger: GGGGCTCCGTGTAGCAACCCAGGTGTTGTCCGTGTC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGCCACCACGGAAGACATaGGTCCCACGGAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTAPPRKT*VPRSIC
Trigger: GCAAATGCTCCGTGGGACTCATGTCTTCCGTGGTGG...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGCGCTCAGGTATGCTCTaGTGCCGTCTATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTARSGML*CRLWLQ
Trigger: CTGGAGCCATAGACGGCATCAGAGCATACCTGAGCG...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACCACCGACTTGAGGCATaGATTCAAACTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYHRLEA*IQTMAS
Trigger: GGATGCCATAGTTTGAATTCATGCCTCAAGTCGGTG...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTGGCTCTGGTGGAGGTaGAGCACGCCACGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGWLWWR*STPRSK
Trigger: CTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCGATGGACGTGCCGGCTaGAAAATGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGDGRAG*KMVQER
Trigger: ACGCTCCTGGACCATTTTGCAGCCGGCACGTCCATC...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTACAGGCTGGGCCGCTaGCCGGTCATCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRYRLGR*PVICWM
Trigger: CATCCAGCAGATGACCGGGCAGCGGCCCAGCCTGTA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGACGTTTTTCTGCCCTaGAGGGACAACAACGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQDVFLP*RDNNGV
Trigger: CACCCCGTTGTTGTCCCTGCAGGGCAGAAAAACGTC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGG +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGSIYGL*WEPRIG
Trigger: CCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTAGGCAGAGTGTGGTCTaGAGGCTGCCTGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRRQSVV*RLPAWG
Trigger: CCCCCATGCAGGCAGCCTGCAGACCACACTCTGCCT...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGTGCTTCTTCCCTCTTaGTCTGGCCGCCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATVLLPS*SGRPGL
Trigger: CAGGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCAC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTACTCATGGGCACACTaGGAGTTGAGGAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYYSWAH*ELRNSV
Trigger: CACAGAATTCCTCAACTCCCAGTGTGCCCATGAGTA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCGGGCATCCGAGCAGTTaGGGCTGTTCCAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGGHPSS*GCSRSC
Trigger: ACAACTCCTGGAACAGCCCCAACTGCTCGGATGCCC...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACAGGGAGAAGCACACCTaGGTGGCCGCGTCAATCCAA +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDREKHT*VAASIQ
Trigger: TTGGATTGACGCGGCCACCCAGGTGTGCTTCTCCCT...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTGTCTGTGCAGCAGCTaGAACTCATCGATGAGCCCG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSCLCSS*NSSMSP
Trigger: CGGGCTCATCGATGAGTTCCAGCTGCTGCACAGACA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCGTGCCGGCTGCAAAATaGTCCAGGAGCGTGAAGACG +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGVPAAK*SRSVKT
Trigger: CGTCTTCACGCTCCTGGACCATTTTGCAGCCGGCAC...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTGCCCGGTCATCTGCTaGATGTCGTCGCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGCPVIC*MSSLNC
Trigger: GCAGTTCAGCGACGACATCCAGCAGATGACCGGGCA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCCTTCTCGGGTGCAATaGCGTAGGCCAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQPSRVQ*RRPVSL
Trigger: GAGAGAAACTGGCCTACGCCATTGCACCCGAGAAGG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCCCACTTTCCTGTCAGTaGCAGAGGGCAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSPLSCQ*QRAVCH
Trigger: ATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGG...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTTACACTCCAGTCCCTaGAGCCCACGTCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSLHSSP*SPRPLA
Trigger: TGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGCCACAGCAAAGCCAATaGCGGACAGGAGAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQPQQSQ*RTGESR
Trigger: TCGACTTTCTCCTGTCCGTCATTGGCTTTGCTGTGG...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGAGGGGAGCTCCGTGGTaGAGGAGGAGAAGAGATAGT +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTARGAPW*RRRRDS
Trigger: ACTATCTCTTCTCCTCCTTCACCACGGAGCTCCCCT...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACAGGGGAGCTCCGTGGTaGAGGAGGAGAAGAGATAGT +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDRGAPW*RRRRDS
Trigger: ACTATCTCTTCTCCTCCTTCACCACGGAGCTCCCCT...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACCCATACCACCTTCCCTaGGGTCTTCACGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNPYHLP*GLHALP
Trigger: TGGAAGGGCGTGAAGACCTCAGGGAAGGTGGTATGG...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACCTCCGATGGCTTCGATaGGCACTCCAAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDLRWLR*ALQRGW
Trigger: CCATCCTCTTTGGAGTGCTCATCGAAGCCATCGGAG...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGCTGGATGTCGTCGCTaGACTGCCCAACACCATAGA +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDAGCRR*TAQHHR
Trigger: TCTATGGTGTTGGGCAGTTCAGCGACGACATCCAGC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGTCTCCCATTGCAGGATaGCTTCCTGGGGTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTASPIAG*LPGVFV
Trigger: GACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGA...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAATCGTGATCCCCGCCTaGGAACACAGTGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATIVIPA*EHSAPG
Trigger: CCCAGGGGCACTGTGTTCTCAGGCGGGGATCACGAT...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGTGCAATGTGTCAACTaGACGCTCAATTTACGGCCT +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKVQCVN*TLNLRP
Trigger: AGGCCGTAAATTGAGCGTTCAGTTGACACATTGCAC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTTGGCAGTTCACAGGCTaGCGGCTCCCACCGAGCATT +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRWQFTG*RLPPSI
Trigger: AATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCA...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCTGTTCCAGGAGTTGTTaGAGTGGATCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSCSRSC*SGSRGA
Trigger: AGCTCCCCTGGATCCACTGCAACAACTCCTGGAACA...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCAGCTCACGGTGTCTGTaGAGCAGCTGGAACTCATCG +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGSSRCL*SSWNSS
Trigger: CGATGAGTTCCAGCTGCTGCACAGACACCGTGAGCT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTATVLLG*NGVGQF
Trigger: AAACTGGCCTACGCCATTGCACCCGAGAAGGACCGT...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCCGGGGTGGACCTCGCTaGACAGATCTACGTCGTTAT +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGRGGPR*TDLRRY
Trigger: ATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCG...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACTCAATTTACGGCCTCTaGTGGGAGCCACGCATCGGG +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNSIYGL*WEPRIG
Trigger: CCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAAGGCAGAGTGTGGTCTaGAGGCTGCCTGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATRQSVV*RLPAWG
Trigger: CCCCCATGCAGGCAGCCTGCAGACCACACTCTGCCT...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGTGTGCTAACTGCAGCTaGCTGGCAGTTCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTACANCS*LAVHRL
Trigger: CAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGCACA...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGATGCCATGGCTCTGGTaGAGGTGCAGCACGCCACGT +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRMPWLW*RCSTPR
Trigger: ACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCAT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTCGATGCCATGGCTCTaGTGGAGGTGCAGCACGCCA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRSMPWL*WRCSTP
Trigger: TGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGAGGACAGAGGGAGCGTaGCGATGGCTTCCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRRTEGA*RWLPGR
Trigger: TCTACCCGGAAGCCATCGCCACGCTCCCTCTGTCCT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCGCACTCCAAAGAGGATaGACGTGCCGGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSALQRG*TCRLQN
Trigger: ATTTTGCAGCCGGCACGTCCATCCTCTTTGGAGTGC...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGCCTTCTCGGGTGCAATaGCGTAGGCCAGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTAPSRVQ*RRPVSL
Trigger: GAGAGAAACTGGCCTACGCCATTGCACCCGAGAAGG...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCGGGCACACTGGGAGTTaGGGAATTCTGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGGHTGS*GILCFF
Trigger: GAAGAAGCACAGAATTCCTCAACTCCCAGTGTGCCC...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGCCATACCACCTTCCCTaGGGTCTTCACGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRPYHLP*GLHALP
Trigger: TGGAAGGGCGTGAAGACCTCAGGGAAGGTGGTATGG...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATATGGCATGGTGGCTGTaGTCCATACCACCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNMAWWL*SIPPSL
Trigger: CAGGGAAGGTGGTATGGATCACAGCCACCATGCCAT...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGAGATGCCACCGTTGGTaGCGCAGAACAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRRCHRW*RRTGTG
Trigger: TCCTGTCCCTGTTCTGCGTCACCAACGGTGGCATCT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGTGGAGGATGTGGCGATaGCCCAGCCCAGCGCGTTGG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLWRMWR*PSPARW
Trigger: CCAACGCGCTGGGCTGGGTCATCGCCACATCCTCCA...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACAAAAACTGTTGTTATTaGTGTGGCACGCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYKNCCY*CGTHLR
Trigger: TCTCAGGTGCGTGCCACATCAATAACAACAGTTTTT...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGTGTTCCAGGAGTTGTTaGAGTGGATCCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTACSRSC*SGSRGA
Trigger: AGCTCCCCTGGATCCACTGCAACAACTCCTGGAACA...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCCACACTGTGCTTCTGTaGCATGTACCCCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGHTVLL*HVPQEG
Trigger: TCCTTCCTGGGGTACATGGCACAGAAGCACAGTGTG...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCCAAAGAGGATGGACGTaGCGGCTGCAAAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGQRGWT*RLQNGP
Trigger: TGGACCATTTTGCAGCCGGCACGTCCATCCTCTTTG...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTGGGGTCTTCGTCTCTaGTCCCTCTACACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNWGLRL*SLYTLS
Trigger: GCTCAAGGTGTAGAGGGAGCAGAGACGAAGACCCCA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGGGGCATCCGAGCAGTTaGGGCTGTTCCAGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRGHPSS*GCSRSC
Trigger: ACAACTCCTGGAACAGCCCCAACTGCTCGGATGCCC...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTAGGGAGAAGCACACCTaGGTGGCCGCGTCAATCCAA +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRREKHT*VAASIQ
Trigger: TTGGATTGACGCGGCCACCCAGGTGTGCTTCTCCCT...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACATGGCCACGTCCCCGATaGGCACACTGTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATWPRPR*AHCASV
Trigger: CACAGAAGCACAGTGTGCCCATCGGGGACGTGGCCA...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTACTCCATACCACCCATaGCGCTGTCGATACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRTPYHP*RCRYPG
Trigger: CCCTGGGTATCGACAGCGCCATGGGTGGTATGGAGT...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGGCACTCCAAAGAGGATaGACGTGCCGGCTGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTAALQRG*TCRLQN
Trigger: ATTTTGCAGCCGGCACGTCCATCCTCTTTGGAGTGC...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTGCCCGGTCATCTGCTaGATGTCGTCGCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRCPVIC*MSSLNC
Trigger: GCAGTTCAGCGACGACATCCAGCAGATGACCGGGCA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTGTAGGCCGCATAGATaGGCACCATGGCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRCRPHR*APWPWR
Trigger: CCTCCATGGCCATGGTGCCCATCTATGCGGCCTACA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTGGGACAACAACGGGGTaGACCTCGCTGCACAGATCT +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRGTTTG*TSLHRS
Trigger: AGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCC...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTTACACTCCAGTCCCTaGAGCCCACGTCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNLHSSP*SPRPLA
Trigger: TGCAAGTGGACGTGGGCTCCAGGGACTGGAGTGTAA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAATGCTGAATAGAGATTaGTCAACAGACACGGACAAC +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPMLNRD*STDTDN
Trigger: GTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACGGGCACACTGGGAGTTaGGGAATTCTGTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNGHTGS*GILCFF
Trigger: GAAGAAGCACAGAATTCCTCAACTCCCAGTGTGCCC...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACATCCCAAAAGTGTCGTTaGGGCCCGAGCTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATSQKCR*GPSCLH
Trigger: GTGGAGACAGCTCGGGCCTCAACGACACTTTTGGGA...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGCGTCTACAAGGATCGTaGTCCCCGCCTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRRLQGS*SPPENT
Trigger: TGTGTTCTCAGGCGGGGATCACGATCCTTGTAGACG...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTCGTCTACAAGGATCGTaGTCCCCGCCTGAGAACACA +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRRLQGS*SPPENT
Trigger: TGTGTTCTCAGGCGGGGATCACGATCCTTGTAGACG...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGGGACCCACACGATGCTaGATAGAGATTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: VDLAAQIYVVITATQDTAGPTRC*IEIGQQ
Trigger: CTGTTGACCAATCTCTATTCAGCATCGTGTGGGTCC...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGGACCCACACGATGCTaGATAGAGATTGGTCAACAG +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDGPTRC*IEIGQQ
Trigger: CTGTTGACCAATCTCTATTCAGCATCGTGTGGGTCC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACCGATGGGCACACTGTaGTTCTGTGCCATGTACCCC +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATPMGTL*FCAMYP
Trigger: GGGGTACATGGCACAGAAGCACAGTGTGCCCATCGG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGATGGACGTGCCGGCTaGAAAATGGTCCAGGAGCGT +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATDGRAG*KMVQER
Trigger: ACGCTCCTGGACCATTTTGCAGCCGGCACGTCCATC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGGGATTCTCAGCAGGTaGGTCTACAAGGATCGTGAT +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDGILSR*VYKDRD
Trigger: ATCACGATCCTTGTAGACGCACCTGCTGAGAATCCC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGGGACAACACCTGGGTTaGTACACGGAGCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLGQHLG*YTEPLP
Trigger: GGGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCC...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCATTTGCTCTTACTCATaGGCACACTGGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSICSYS*AHWELR
Trigger: CCTCAACTCCCAGTGTGCCCATGAGTAAGAGCAAAT...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACAGTGAGGACCACGTATaGCATGGTGGCTGTGATCCA +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNSEDHV*HGGCDP
Trigger: TGGATCACAGCCACCATGCCATACGTGGTCCTCACT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAAAACTTAGATTTCCTTaGTTTGTTCGTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPKLRFP*FVRVSP
Trigger: GGGAGAGACACGAACAAACCAAGGAAATCTAAGTTT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGATTTACGGCCTCTGCTaGGAGCCACGCATCGGGAAA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRIYGLC*EPRIGK
Trigger: TTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAAT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGAAATAAAATTCCAGTaGGGTCCCTTCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQEIKFQ*GPFLEV
Trigger: GACCTCCAGGAAGGGACCCCACTGGAATTTTATTTC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTCCACTTTCCTGTCAGTaGCAGAGGGCAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRPLSCQ*QRAVCH
Trigger: ATGGCACACTGCCCTCTGCCACTGACAGGAAAGTGG...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATGAAGCCGACATACAGTaGGATGAGGATGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNEADIQ*DEDDRE
Trigger: TTCACGGTCATCCTCATCTCACTGTATGTCGGCTTC...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAAATGGTCCAGGAGCGTaGAGACGTAGATGCCACCGT +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATNGPGA*RRRCHR
Trigger: ACGGTGGCATCTACGTCTTCACGCTCCTGGACCATT...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACTCCGATGGCTTCGATaGGCACTCCAAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATLRWLR*ALQRGW
Trigger: CCATCCTCTTTGGAGTGCTCATCGAAGCCATCGGAG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACGTGCAATGTGTCAACTaGACGCTCAATTTACGGCCT +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDVQCVN*TLNLRP
Trigger: AGGCCGTAAATTGAGCGTTCAGTTGACACATTGCAC...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCATCCTCCAATGCCTCTaGACAGACTGTGTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGILQCL*TDCVCN
Trigger: ATTGCACACACAGTCTGTTCAGAGGCATTGGAGGAT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATGCAGGCCCACCGACTTaGGGCATGAATTCAAACTAT +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNAGPPT*GMNSNY
Trigger: ATAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGC...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGAGCTGCACTCCGTTCTaGTCCTTGACAAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRSCTPF*SLTRMS
Trigger: GCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCT...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTGTCAACGCTCAGGTATaGTCTGATGCCGTCTATGGC +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRVNAQV*SDAVYG
Trigger: GCCATAGACGGCATCAGAGCATACCTGAGCGTTGAC...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGCGCTGCCCGGTCATCTaGTGGATGTCGTCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLRCPVI*WMSSLN
Trigger: GTTCAGCGACGACATCCAGCAGATGACCGGGCAGCG...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACCTCCATTTCACCTTCTaGACAGCTAAACCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDLHFTF*TAKPSR
Trigger: CCTGCTTGGTTTAGCTGTGCAGAAGGTGAAATGGAG...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGGATGAAGATCAGCCCTaGCCCGTCCTTGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLDEDQP*PVLGHV
Trigger: GACGTGGCCAAGGACGGGCCAGGGCTGATCTTCATC...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGGAAGCCGACATACAGTaGGATGAGGATGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: MLNRDWSTDTDNTWVATREADIQ*DEDDRE
Trigger: TTCACGGTCATCCTCATCTCACTGTATGTCGGCTTC...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGCGCTCAGGTATGCTCTaGTGCCGTCTATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLRSGML*CRLWLQ
Trigger: CTGGAGCCATAGACGGCATCAGAGCATACCTGAGCG...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGAGGACCCAGGCAGGCTaGAGAACTTGTAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLRTQAG*RTCRPH
Trigger: ATGCGGCCTACAAGTTCTGCAGCCTGCCTGGGTCCT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCTCCATTTCACCTTCTaGACAGCTAAACCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNLHFTF*TAKPSR
Trigger: CCTGCTTGGTTTAGCTGTGCAGAAGGTGAAATGGAG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGCTTGTAAACAAAAACTaGAATATCAGCAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKLVNKN*NISKQA
Trigger: AGCCTGCTTGCTGATATTGCAGTTTTTGTTTACAAG...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGCAGGAGTTGTTGCAGTaGATCCAGGGGAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLQELLQ*IQGSSV
Trigger: CACGGAGCTCCCCTGGATCCACTGCAACAACTCCTG...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGCTTTGCATGAATTTGTaGTTTCCTCCATTTCACCTT +
Preference number: 4 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKLCMNL*FPPFHL
Trigger: AAGGTGAAATGGAGGAAACCACAAATTCATGCAAAG...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACGAAATAAAATTCCAGTaGGGTCCCTTCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNEIKFQ*GPFLEV
Trigger: GACCTCCAGGAAGGGACCCCACTGGAATTTTATTTC...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGATGGCATGGTGGCTGTaGTCCATACCACCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLMAWWL*SIPPSL
Trigger: CAGGGAAGGTGGTATGGATCACAGCCACCATGCCAT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACTTGAAGAGTAGAAGTTaGCCTCCTTTCTCTCGAAAC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDLKSRS*PPFSRN
Trigger: GTTTCGAGAGAAAGGAGGGCAACTTCTACTCTTCAA...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTTACTCATGGGCACACTaGGAGTTGAGGAATTCTGTG +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRYSWAH*ELRNSV
Trigger: CACAGAATTCCTCAACTCCCAGTGTGCCCATGAGTA...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACCACACCTTTCAGTATaGGGCAGATCTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATPHLSV*GRSSRH
Trigger: GTGTCTGGAAGATCTGCCCCATACTGAAAGGTGTGG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGAGAAGCACACCTGGGTaGCCGCGTCAATCCAAACAG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLRSTPG*PRQSKQ
Trigger: CTGTTTGGATTGACGCGGCCACCCAGGTGTGCTTCT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACATGCTGAATAGAGATTaGTCAACAGACACGGACAAC +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDMLNRD*STDTDN
Trigger: GTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 72 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATaGCAGGATGACTTCCTGGGGTCTTCGTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLP*QDDFLGSSSLL
Trigger: GAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGATCCTCTGTGCTAACTaGAGCTGCCTGGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLILCAN*SCLAVH
Trigger: GTGAACTGCCAGGCAGCTGCAGTTAGCACAGAGGAT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCACCAAGCAGGACACTTaGCTTTTTAATATGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGTKQDT*LFNMGK
Trigger: TTTGCCCATATTAAAAAGCCAAGTGTCCTGCTTGGT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGGAGGGCAGTGTGCCATaGAAAGCAGCTTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLEGSVP*KAAFGQ
Trigger: TTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTC...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGAACAGAATTTCCTGGTaGGACATACCAGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLNRISW*DIPGPP
Trigger: TGGGGGTCCTGGTATGTCTCACCAGGAAATTCTGTT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTAAAAACTGTTGTTATTaGTGTGGCACGCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRKNCCY*CGTHLR
Trigger: TCTCAGGTGCGTGCCACATCAATAACAACAGTTTTT...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp CCCCCATCCTCCAATGCCTCTGAACAGACTGTGTGTGCAATGTGTCAACTGAACAAACTTAGATTTCCTTaGTTTGTTCGTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PPSSNASEQTVCAMCQLNKLRFP*FVRVSP
Trigger: GGGAGAGACACGAACAAACCAAGGAAATCTAAGTTT...GTTCAGTTGACACATTGCACACACAGTCTGTTCAGAGGCATTGGAGGATGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AGGGAGCCTCACACAGACAGCATGAAGTTAGACGTTTTTCTGCCCTGCAGGGACCTTTGCATGAATTTGTaGTTTCCTCCATTTCACCTT +
Preference number: 4 (lower is better)
Translates to: REPHTDSMKLDVFLPCRDLCMNL*FPPFHL
Trigger: AAGGTGAAATGGAGGAAACCACAAATTCATGCAAAG...GTCCCTGCAGGGCAGAAAAACGTCTAACTTCATGCTGTCTGTGTGAGGCTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
3UTR CAA 72 bp CAGTGGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTaGGCCAACATCCTTCACTCAGTATTGCTAATTATT +
Preference number: 4 (lower is better)
Translates to: QWQRAVCHGKQL*ANILHSVLLII
Trigger: AATAATTAGCAATACTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR TCA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCGGATACTGCATTCTTaGATTTGTTTTGATTCACAG +
Preference number: 4 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNRILHS*ICFDSQ
Trigger: CTGTGAATCAAAACAAATTCAAGAATGCAGTATCCG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR GCA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACAGGCTCGCGGATACTaGATTCTTGAATTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATQARGY*ILEFVL
Trigger: CAAAACAAATTCAAGAATGCAGTATCCGCGAGCCTG...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGATTTGCTCTTACTCATaGGCACACTGGGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLICSYS*AHWELR
Trigger: CCTCAACTCCCAGTGTGCCCATGAGTAAGAGCAAAT...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CCA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGCTGTTGTTATTGATGTaGCACGCACCTGAGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLLLLLM*HAPERN
Trigger: ATTTCTCTCAGGTGCGTGCCACATCAATAACAACAG...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 90 bp CCCTCTTGGTCTGGCCGCCCGGGCCTGGGCTTTGCACGCGAGTCCTaGCGCCGAGAGCGTTCCGCGAAGCCTCCCCTCCCGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: PSWSGRPGLGFARES*RRERSAKPPLPLRS
Trigger: GCTGCGGAGCGGGAGGGGAGGCTTCGCGGAACGCTCTCGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAGACCAAGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAGCCCGGGCCTGGGCTTaGCACGCGAGTCCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPARAWA*HASPGA
Trigger: GGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGC...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATTGCTCCCTCTACACCTaGAGCCAGTGGCGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHCSLYT*SQWRSV
Trigger: CACGCTCCGCCACTGGCTCAAGGTGTAGAGGGAGCA...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp ATCTTCTTGCCCCAGGTCTCCCGATCCTGGGCCTCCACGGGGCTCTaGCGCGGGTTGGTGAGGGTGGAGCTGGTGAGCTGCACTCCGTTC +
Preference number: 5 (lower is better)
Translates to: IFLPQVSRSWASTGL*RGLVRVELVSCTPF
Trigger: GAACGGAGTGCAGCTCACCAGCTCCACCCTCACCAACCCGCGGCAGAGCCCCGTGGAGGCCCAGGATCGGGAGACCTGGGGCAAGAAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 90 bp AGCTGCCACCGCGGAGGCCCCAGGTCGTCGATGCCATGGCTCTGGTaGAGGTGCAGCACGCCACGTTCAAAGTACTCGGCAGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: SCHRGGPRSSMPWLW*RCSTPRSKYSAAGV
Trigger: CACACCTGCTGCCGAGTACTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGACGACCTGGGGCCTCCGCGGTGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 90 bp GTGAGCTGCCACCGCGGAGGCCCCAGGTCGTCGATGCCATGGCTCTaGTGGAGGTGCAGCACGCCACGTTCAAAGTACTCGGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VSCHRGGPRSSMPWL*WRCSTPRSKYSAAG
Trigger: ACCTGCTGCCGAGTACTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGACGACCTGGGGCCTCCGCGGTGGCAGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TGCACGGCCCCTGCCCTCGGGCAGCACGTAGGCAGGCCCACCGACTTGAGGCATGTCCCAAAAGTGTCGTaGAGGCCCGAGCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CTAPALGQHVGRPTDLRHVPKVS*RPELSP
Trigger: TGGAGACAGCTCGGGCCTCAACGACACTTTTGGGAC...ATGCCTCAAGTCGGTGGGCCTGCCTACGTGCTGCCCGAGGGCAGGGGCCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CCAGTCCCTGGAGCCCACGTCCACTTGCAGGGGACAGCCATGACTGGCCCTGCAGGAGCCCACGTCCACTaGCAGGGGACAGCCATGACT +
Preference number: 5 (lower is better)
Translates to: PVPGAHVHLQGTAMTGPAGAHVH*QGTAMT
Trigger: AGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCC...TGCAGGGCCAGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCCAGGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp TGCCGCGGGTTGGTGAGGGTGGAGCTGGTGAGCTGCACTCCGTTCTaGTCCTTGACAAGGATGAGCTCCACCTCCTTCGGGCCCACGGCA +
Preference number: 5 (lower is better)
Translates to: CRGLVRVELVSCTPF*SLTRMSSTSFGPTA
Trigger: TGCCGTGGGCCCGAAGGAGGTGGAGCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCTCACCAGCTCCACCCTCACCAACCCGCGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp CTGGCGCACCTCCCCTCTGTCCACCAGCTCACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTTACTGCCAGTGCCCATGCCGACCAG +
Preference number: 5 (lower is better)
Translates to: LAHLPSVHQLTVLLG*NGVGQFTASAHADQ
Trigger: CTGGTCGGCATGGGCACTGGCAGTAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAGGGGAGGTGCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512002.2
ENST00000630314.1
CDS-3UTR CAA 90 bp TTCCCTACACCGCAAGGACCCACAGGCTGCCTGAGTGGCAGTAGCCTGAGCTGGCGGACAACACCTGGGTaGCTACACGGAGCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: FPTPQGPTGCLSGSSLSWRTTPG*LHGAPP
Trigger: GGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCCG...CCAGCTCAGGCTACTGCCACTCAGGCAGCCTGTGGGTCCTTGCGGTGTAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp TCCACGGGGCTCTGCCGCGGGTTGGTGAGGGTGGAGCTGGTGAGCTaGACTCCGTTCTGCTCCTTGACAAGGATGAGCTCCACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: STGLCRGLVRVELVS*TPFCSLTRMSSTSF
Trigger: GAAGGAGGTGGAGCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCTCACCAGCTCCACCCTCACCAACCCGCGGCAGAGCCCCGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp CTGGCGCACCTCCCCTCTGTCCACCAGCTCACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTTCTCTCGAAAGGACCCAGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LAHLPSVHQLTVLLG*NGVGQFLSKGPRQA
Trigger: AGCCTGCCTGGGTCCTTTCGAGAGAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAGGGGAGGTGCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTTCGGGCCCACGGCATaGGGCTCCTTAGCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQFGPTA*GSLAGA
Trigger: GGCCCCGGCTAAGGAGCCCAATGCCGTGGGCCCGAA...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGGCGGCCCCTTCCCTGTaGAACTGGCCGAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQAAPSL*NWPRAS
Trigger: GCTGGCCCTCGGCCAGTTCAACAGGGAAGGGGCCGC...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp CCAAACAGACGCCTCGCAGAGCCGGTAGAAGTCAACGCTCAGGTATaGTCTGATGCCGTCTATGGCTCCAGGGAGGGTGACCCCACGCAG +
Preference number: 5 (lower is better)
Translates to: PNRRLAEPVEVNAQV*SDAVYGSREGDPTQ
Trigger: CTGCGTGGGGTCACCCTCCCTGGAGCCATAGACGGCATCAGAGCATACCTGAGCGTTGACTTCTACCGGCTCTGCGAGGCGTCTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTGGGCATCCGAGCAGTaGGGGCTGTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYWASEQ*GLFQEL
Trigger: CAACTCCTGGAACAGCCCCAACTGCTCGGATGCCCA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 90 bp TCGTGTCTCTCCCATTGCAGGATGACTTCCTGGGGTCTTCGTCTCTaGTCCCTCTACACCTTGAGCCAGTGGCGGAGCGTGAACTGGCGC +
Preference number: 5 (lower is better)
Translates to: SCLSHCRMTSWGLRL*SLYTLSQWRSVNWR
Trigger: GCGCCAGTTCACGCTCCGCCACTGGCTCAAGGTGTAGAGGGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGAGACACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270349.12
ENST00000512002.2
ENST00000621716.2
ENST00000630314.1
CDS CCA 90 bp TGGAAGATGCAGCCTCAGGAAGTGAACCCTCCCGGGCCAGCGGCCTaGAAGAGCCTGAGAAGCAGGGGGCTGTCTGTGTTCATTGATCTG +
Preference number: 5 (lower is better)
Translates to: WKMQPQEVNPPGPAA*KSLRSRGLSVFIDL
Trigger: CAGATCAATGAACACAGACAGCCCCCTGCTTCTCAGGCTCTTCCAGGCCGCTGGCCCGGGAGGGTTCACTTCCTGAGGCTGCATCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511750.1
ENST00000626610.1
CDS-3UTR CAA 90 bp ACGATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACAGCCCGGGCCTGGGCTTaGCACGCGAGTCCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: TMLNRDWSTDTDNTWVATARAWA*HASPGA
Trigger: GGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGC...TGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCATCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATGCGGCCCCTTCCCTGTaGAACTGGCCGAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNAAPSL*NWPRAS
Trigger: GCTGGCCCTCGGCCAGTTCAACAGGGAAGGGGCCGC...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACGTCCCAAAAGTGTCGTaGAGGCCCGAGCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYVPKVS*RPELSP
Trigger: TGGAGACAGCTCGGGCCTCAACGACACTTTTGGGAC...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCACCCAGCCCAGCGCGTaGGCCCAGTCGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGTQPSA*AQSGKM
Trigger: CATCTTCCCCGACTGGGCCAACGCGCTGGGCTGGGT...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS TCA 90 bp GAGTCCCACGGAGCATTTGCTCTTACTCATGGGCACACTGGGAGTTaGGGAATTCTGTGCTTCTTCCCTCTTGGTCTGGCCGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ESHGAFALTHGHTGS*GILCFFPLGLAARA
Trigger: GGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCACAGAATTCCTCAACTCCCAGTGTGCCCATGAGTAAGAGCAAATGCTCCGTGGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS TCA 90 bp CACGTTCAAAGTACTCGGCAGCAGGTGTGGTCCCAAAAGTGTCGTTaGGGCCCGAGCTGTCTCCACTGGAGTCACCAGGATGGGCATCCG +
Preference number: 5 (lower is better)
Translates to: HVQSTRQQVWSQKCR*GPSCLHWSHQDGHP
Trigger: CGGATGCCCATCCTGGTGACTCCAGTGGAGACAGCTCGGGCCTCAACGACACTTTTGGGACCACACCTGCTGCCGAGTACTTTGAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 90 bp AAAGTGTCGTTGAGGCCCGAGCTGTCTCCACTGGAGTCACCAGGATaGGCATCCGAGCAGTTGGGGCTGTTCCAGGAGTTGTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: KVSLRPELSPLESPG*ASEQLGLFQELLQW
Trigger: CCACTGCAACAACTCCTGGAACAGCCCCAACTGCTCGGATGCCCATCCTGGTGACTCCAGTGGAGACAGCTCGGGCCTCAACGACACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTGTGCTTCTTCCCTCTaGGTCTGGCCGCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGCASSL*VWPPGP
Trigger: AGGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCACA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GGCAGAGGGCAGTGTGCCATGGAAAGCAGCTTTTGGCCAACATCCTTCACTCAGTGCTCCCTCTACACCTaGAGCCAGTGGCGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: GRGQCAMESSFWPTSFTQCSLYT*SQWRSV
Trigger: CACGCTCCGCCACTGGCTCAAGGTGTAGAGGGAGCA...CTGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATGGCACACTGCCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCGGAGCCCACGTCCACTaGCAGGGGACAGCCATGACT +
Preference number: 5 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSGAHVH*QGTAMT
Trigger: AGTCATGGCTGTCCCCTGCAAGTGGACGTGGGCTCC...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACACTCCAAAGCTCGTCAGGGAGTaGATGGAGGTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: CSCLAVHRLTAPTEHYTPKLVRE*MEVVTI
Trigger: GATTGTCACCACCTCCATCAACTCCCTGACGAGCTT...TGGAGTGTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp AAAGTAAATGGTCTAGGAAGCTACTGTGAGCACGGGGATTCTCAGCAGGTGCGTACCCAGCCCAGCGCGTaGGCCCAGTCGGGGAAGATG +
Preference number: 5 (lower is better)
Translates to: KVNGLGSYCEHGDSQQVRTQPSA*AQSGKM
Trigger: CATCTTCCCCGACTGGGCCAACGCGCTGGGCTGGGT...ACGCACCTGCTGAGAATCCCCGTGCTCACAGTAGCTTCCTAGACCATTTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 90 bp AGGACGATGAAGAGCGTGAAGAGCTCACGGTGTCTGTGCAGCAGCTaGAACTCATCGATGAGCCCGGTGATCACTGACTCCATACCACCC +
Preference number: 5 (lower is better)
Translates to: RTMKSVKSSRCLCSS*NSSMSPVITDSIPP
Trigger: GGGTGGTATGGAGTCAGTGATCACCGGGCTCATCGATGAGTTCCAGCTGCTGCACAGACACCGTGAGCTCTTCACGCTCTTCATCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGTGTGCTTCTTCCCTCTaGGTCTGGCCGCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRCASSL*VWPPGP
Trigger: AGGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCACA...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGAGTCCCACGGAGCATTaGCTCTTACTCATGGGCACA +
Preference number: 5 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKSPTEH*LLLMGT
Trigger: TGTGCCCATGAGTAAGAGCAAATGCTCCGTGGGACT...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGGGCAGGCCCACCGACTaGAGGCATGAATTCAAACTA +
Preference number: 5 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKGRPTD*RHEFKL
Trigger: TAGTTTGAATTCATGCCTCAAGTCGGTGGGCCTGCC...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp ATGCTGAATAGAGATTGGTCAACAGACACGGACAACACCTGGGTTGCTACACGGCGGACAACACCTGGGTaGCTACACGGAGCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: MLNRDWSTDTDNTWVATRRTTPG*LHGAPP
Trigger: GGGAGGGGCTCCGTGTAGCAACCCAGGTGTTGTCCG...CCGTGTAGCAACCCAGGTGTTGTCCGTGTCTGTTGACCAATCTCTATTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATTGGGCATCCGAGCAGTaGGGGCTGTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNWASEQ*GLFQEL
Trigger: CAACTCCTGGAACAGCCCCAACTGCTCGGATGCCCA...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GCTAACTGCAGCTGCCTGGCAGTTCACAGGCTGACGGCTCCCACCGAGCATTACTGTGGATGTCTTTTATaGTGCTTAGGGACCCACACG +
Preference number: 5 (lower is better)
Translates to: ANCSCLAVHRLTAPTEHYCGCLL*CLGTHT
Trigger: CGTGTGGGTCCCTAAGCACAATAAAAGACATCCACA...GTAATGCTCGGTGGGAGCCGTCAGCCTGTGAACTGCCAGGCAGCTGCAGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CGTCGTTATTACAGCAACACAAGACACGGCGAGGTGCGCTCCCGGCACGGAAAGCATGGAAAGCAGCTTTaGGCCAACATCCTTCACTCA +
Preference number: 5 (lower is better)
Translates to: RRYYSNTRHGEVRSRHGKHGKQL*ANILHS
Trigger: TGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATG...CTTTCCGTGCCGGGAGCGCACCTCGCCGTGTCTTGTGTTGCTGTAATAACGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATAAGCTCGTCAGGGAGTaGATGGAGGTGGTGACAATC +
Preference number: 5 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNKLVRE*MEVVTI
Trigger: GATTGTCACCACCTCCATCAACTCCCTGACGAGCTT...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CAGGGACAACAACGGGGTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCCATGGAAAGCAGCTTTaGGCCAACATCCTTCACTCA +
Preference number: 5 (lower is better)
Translates to: QGQQRGGPRCTDLRRYYSHGKQL*ANILHS
Trigger: TGAGTGAAGGATGTTGGCCAAAAGCTGCTTTCCATG...GCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCACCCCGTTGTTGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp CTGAGAGAAATAAAATTCCAGTGGGGTCCCTTCCTGGAGGTCACGGCTCAAGGCTGTGGATGTCTTTTATaGTGCTTAGGGACCCACACG +
Preference number: 5 (lower is better)
Translates to: LREIKFQWGPFLEVTAQGCGCLL*CLGTHT
Trigger: CGTGTGGGTCCCTAAGCACAATAAAAGACATCCACA...GCCTTGAGCCGTGACCTCCAGGAAGGGACCCCACTGGAATTTTATTTCTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp GTGGACCTCGCTGCACAGATCTACGTCGTTATTACAGCAACACAAGACACGGCGTTAGATTTCCTTGGTTaGTTCGTGTCTCTCCCATTG +
Preference number: 5 (lower is better)
Translates to: VDLAAQIYVVITATQDTALDFLG*FVSLPL
Trigger: CAATGGGAGAGACACGAACAAACCAAGGAAATCTAA...CGCCGTGTCTTGTGTTGCTGTAATAACGACGTAGATCTGTGCAGCGAGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp TCAATTTACGGCCTCTGCTGGGAGCCACGCATCGGGAAAGGACTTTGCATGAATCATCGGGAAAGGACTTaGCATGAATTTGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SIYGLCWEPRIGKGLCMNHRERT*HEFVVS
Trigger: GGAAACCACAAATTCATGCAAAGTCCTTTCCCGATG...ATTCATGCAAAGTCCTTTCCCGATGCGTGGCTCCCAGCAGAGGCCGTAAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS-3UTR CAA 90 bp AACTTAGATTTCCTTGGTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTGTTAGATTTCCTTGGTTaGTTCGTGTCTCTCCCATTG +
Preference number: 5 (lower is better)
Translates to: NLDFLGLFVSLPLQDDFLLDFLG*FVSLPL
Trigger: CAATGGGAGAGACACGAACAAACCAAGGAAATCTAA...CAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAACCAAGGAAATCTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp TCTGGCCGCCCGGGCCTGGGCTTTGCACGCGAGTCCTaGCGCCGAGAGCGTTCCGCGAAGCCTCCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: SGRPGLGFARES*RRERSAKPPLP
Trigger: CGGGAGGGGAGGCTTCGCGGAACGCTCTCGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp CCCCAGGTCTCCCGATCCTGGGCCTCCACGGGGCTCTaGCGCGGGTTGGTGAGGGTGGAGCTGGTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PQVSRSWASTGL*RGLVRVELVSC
Trigger: GCAGCTCACCAGCTCCACCCTCACCAACCCGCGGCAGAGCCCCGTGGAGGCCCAGGATCGGGAGACCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CAA 72 bp TTCTTCCCTCTTGGTCTGGCCGCCCGGGCCTGGGCTTaGCACGCGAGTCCTGGCGCCGAGAGCGTTCCGCGA +
Preference number: 6 (lower is better)
Translates to: FFPLGLAARAWA*HASPGAESVPR
Trigger: TCGCGGAACGCTCTCGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAGACCAAGAGGGAAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp CTGTGCTTCTTCCCTCTTGGTCTGGCCGCCCGGGCCTaGGCTTTGCACGCGAGTCCTGGCGCCGAGAGCGTT +
Preference number: 6 (lower is better)
Translates to: LCFFPLGLAARA*ALHASPGAESV
Trigger: AACGCTCTCGGCGCCAGGACTCGCGTGCAAAGCCCAGGCCCGGGCGGCCAGACCAAGAGGGAAGAAGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp CCCCGAACCCCACGCCCAGGGAGAAGCACACCTGGGTaGCCGCGTCAATCCAAACAGACGCCTCGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: PRTPRPGRSTPG*PRQSKQTPRRA
Trigger: GGCTCTGCGAGGCGTCTGTTTGGATTGACGCGGCCACCCAGGTGTGCTTCTCCCTGGGCGTGGGGTTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp AGCTGCCACCGCGGAGGCCCCAGGTCGTCGATGCCATaGCTCTGGTGGAGGTGCAGCACGCCACGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: SCHRGGPRSSMP*LWWRCSTPRSK
Trigger: CTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGACGACCTGGGGCCTCCGCGGTGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp AGCACCCCGAACCCCACGCCCAGGGAGAAGCACACCTaGGTGGCCGCGTCAATCCAAACAGACGCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: STPNPTPREKHT*VAASIQTDASQ
Trigger: CTGCGAGGCGTCTGTTTGGATTGACGCGGCCACCCAGGTGTGCTTCTCCCTGGGCGTGGGGTTCGGGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp CGCGGAGGCCCCAGGTCGTCGATGCCATGGCTCTGGTaGAGGTGCAGCACGCCACGTTCAAAGTACTCGGCA +
Preference number: 6 (lower is better)
Translates to: RGGPRSSMPWLW*RCSTPRSKYSA
Trigger: TGCCGAGTACTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGACGACCTGGGGCCTCCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp CAGCCTCAGGAAGTGAACCCTCCCGGGCCAGCGGCCTaGAAGAGCCTGAGAAGCAGGGGGCTGTCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: QPQEVNPPGPAA*KSLRSRGLSVF
Trigger: GAACACAGACAGCCCCCTGCTTCTCAGGCTCTTCCAGGCCGCTGGCCCGGGAGGGTTCACTTCCTGAGGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511750.1
ENST00000626610.1
CDS CCA 72 bp AGCACCCCGAACCCCACGCCCAGGGAGAAGCACACCTaGGTGGCCGCGTCAATCCAAACCTGCAGAGCCAGA +
Preference number: 6 (lower is better)
Translates to: STPNPTPREKHT*VAASIQTCRAR
Trigger: TCTGGCTCTGCAGGTTTGGATTGACGCGGCCACCCAGGTGTGCTTCTCCCTGGGCGTGGGGTTCGGGGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511750.1
ENST00000626610.1
CDS GCA 72 bp GGCCCCAGGTCGTCGATGCCATGGCTCTGGTGGAGGTaGAGCACGCCACGTTCAAAGTACTCGGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: GPRSSMPWLWWR*STPRSKYSAAG
Trigger: ACCTGCTGCCGAGTACTTTGAACGTGGCGTGCTGCACCTCCACCAGAGCCATGGCATCGACGACCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp AGATCAGCCCTGGCCCGTCCTTGGCCACGTCCCCGATaGGCACACTGTGCTTCTGTGCCATGTACCCCAGGA +
Preference number: 6 (lower is better)
Translates to: RSALARPWPRPR*AHCASVPCTPG
Trigger: TCCTGGGGTACATGGCACAGAAGCACAGTGTGCCCATCGGGGACGTGGCCAAGGACGGGCCAGGGCTGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CAA 72 bp ACAAGGATGAGCTCCACCTCCTTCGGGCCCACGGCATaGGGCTCCTTAGCCGGGGCCACCACGGAAGACATG +
Preference number: 6 (lower is better)
Translates to: TRMSSTSFGPTA*GSLAGATTEDM
Trigger: CATGTCTTCCGTGGTGGCCCCGGCTAAGGAGCCCAATGCCGTGGGCCCGAAGGAGGTGGAGCTCATCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CAA 90 bp TGCTCCTTGACAAGGATGAGCTCCACCTCCTTCGGGCCCACGGCATaGGGCTCCTTAGCCGGGGCCACCACGGAAGACATGAGTCCCACG +
Preference number: 6 (lower is better)
Translates to: CSLTRMSSTSFGPTA*GSLAGATTEDMSPT
Trigger: CGTGGGACTCATGTCTTCCGTGGTGGCCCCGGCTAAGGAGCCCAATGCCGTGGGCCCGAAGGAGGTGGAGCTCATCCTTGTCAAGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CAA 90 bp GGGTTGGTGAGGGTGGAGCTGGTGAGCTGCACTCCGTTCTGCTCCTaGACAAGGATGAGCTCCACCTCCTTCGGGCCCACGGCATTGGGC +
Preference number: 6 (lower is better)
Translates to: GLVRVELVSCTPFCS*TRMSSTSFGPTALG
Trigger: GCCCAATGCCGTGGGCCCGAAGGAGGTGGAGCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCTCACCAGCTCCACCCTCACCAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS TCA 72 bp TGGGCCGCTGCCCGGTCATCTGCTGGATGTCGTCGCTaGACTGCCCAACACCATAGAACCAGGCCACTCCGA +
Preference number: 6 (lower is better)
Translates to: WAAARSSAGCRR*TAQHHRTRPLR
Trigger: TCGGAGTGGCCTGGTTCTATGGTGTTGGGCAGTTCAGCGACGACATCCAGCAGATGACCGGGCAGCGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp CGCCTCGCAGAGCCGGTAGAAGTCAACGCTCAGGTATaGTCTGATGCCGTCTATGGCTCCAGGGAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: RLAEPVEVNAQV*SDAVYGSREGD
Trigger: GTCACCCTCCCTGGAGCCATAGACGGCATCAGAGCATACCTGAGCGTTGACTTCTACCGGCTCTGCGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp CTTGGCCACGTCCCCGATGGGCACACTGTGCTTCTGTaGCATGTACCCCAGGAAGGAGAAGACGACGAAGCC +
Preference number: 6 (lower is better)
Translates to: LGHVPDGHTVLL*HVPQEGEDDEA
Trigger: GGCTTCGTCGTCTTCTCCTTCCTGGGGTACATGGCACAGAAGCACAGTGTGCCCATCGGGGACGTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp CTCCCCTCTGTCCACCAGCTCACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTTCTCTCGAAAGGACCC +
Preference number: 6 (lower is better)
Translates to: LPSVHQLTVLLG*NGVGQFLSKGP
Trigger: GGGTCCTTTCGAGAGAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp CTCCCCTCTGTCCACCAGCTCACGGTCCTTCTCGGGTaGAATGGCGTAGGCCAGTTTACTGCCAGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: LPSVHQLTVLLG*NGVGQFTASAH
Trigger: ATGGGCACTGGCAGTAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512002.2
ENST00000630314.1
CDS CCA 72 bp TTGAGGCCCGAGCTGTCTCCACTGGAGTCACCAGGATaGGCATCCGAGCAGTTGGGGCTGTTCCAGGAGTTG +
Preference number: 6 (lower is better)
Translates to: LRPELSPLESPG*ASEQLGLFQEL
Trigger: CAACTCCTGGAACAGCCCCAACTGCTCGGATGCCCATCCTGGTGACTCCAGTGGAGACAGCTCGGGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp CTCTGTCCACCAGCTCACGGTCCTTCTCGGGTGCAATaGCGTAGGCCAGTTTACTGCCAGTGCCCATGCCGA +
Preference number: 6 (lower is better)
Translates to: LCPPAHGPSRVQ*RRPVYCQCPCR
Trigger: TCGGCATGGGCACTGGCAGTAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512002.2
ENST00000630314.1
CDS GCA 72 bp TTGGTGAGGGTGGAGCTGGTGAGCTGCACTCCGTTCTaGTCCTTGACAAGGATGAGCTCCACCTCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: LVRVELVSCTPF*SLTRMSSTSFG
Trigger: CCCGAAGGAGGTGGAGCTCATCCTTGTCAAGGAGCAGAACGGAGTGCAGCTCACCAGCTCCACCCTCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp TCCCATTGCAGGATGACTTCCTGGGGTCTTCGTCTCTaGTCCCTCTACACCTTGAGCCAGTGGCGGAGCGTG +
Preference number: 6 (lower is better)
Translates to: SHCRMTSWGLRL*SLYTLSQWRSV
Trigger: CACGCTCCGCCACTGGCTCAAGGTGTAGAGGGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCAATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270349.12
ENST00000512002.2
ENST00000621716.2
ENST00000630314.1
CDS CCA 72 bp CTCTGTCCACCAGCTCACGGTCCTTCTCGGGTGCAATaGCGTAGGCCAGTTTCTCTCGAAAGGACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: LCPPAHGPSRVQ*RRPVSLERTQA
Trigger: TGCCTGGGTCCTTTCGAGAGAAACTGGCCTACGCCATTGCACCCGAGAAGGACCGTGAGCTGGTGGACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CAA 90 bp CCACGTTCAAAGTACTCGGCAGCAGGTGTGGTCCCAAAAGTGTCGTaGAGGCCCGAGCTGTCTCCACTGGAGTCACCAGGATGGGCATCC +
Preference number: 6 (lower is better)
Translates to: PRSKYSAAGVVPKVS*RPELSPLESPGWAS
Trigger: GGATGCCCATCCTGGTGACTCCAGTGGAGACAGCTCGGGCCTCAACGACACTTTTGGGACCACACCTGCTGCCGAGTACTTTGAACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS TCA 72 bp AGTACTCGGCAGCAGGTGTGGTCCCAAAAGTGTCGTTaGGGCCCGAGCTGTCTCCACTGGAGTCACCAGGAT +
Preference number: 6 (lower is better)
Translates to: STRQQVWSQKCR*GPSCLHWSHQD
Trigger: ATCCTGGTGACTCCAGTGGAGACAGCTCGGGCCTCAACGACACTTTTGGGACCACACCTGCTGCCGAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS TCA 72 bp CAGCAGCTGGAACTCATCGATGAGCCCGGTGATCACTaGCTCCATACCACCCATGGCGCTGTCGATACCCAG +
Preference number: 6 (lower is better)
Translates to: QQLELIDEPGDH*LHTTHGAVDTQ
Trigger: CTGGGTATCGACAGCGCCATGGGTGGTATGGAGTCAGTGATCACCGGGCTCATCGATGAGTTCCAGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp AAGAGCGTGAAGAGCTCACGGTGTCTGTGCAGCAGCTaGAACTCATCGATGAGCCCGGTGATCACTGACTCC +
Preference number: 6 (lower is better)
Translates to: KSVKSSRCLCSS*NSSMSPVITDS
Trigger: GGAGTCAGTGATCACCGGGCTCATCGATGAGTTCCAGCTGCTGCACAGACACCGTGAGCTCTTCACGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS GCA 72 bp TTCGATGAGCACTCCAAAGAGGATGGACGTGCCGGCTaGAAAATGGTCCAGGAGCGTGAAGACGTAGATGCC +
Preference number: 6 (lower is better)
Translates to: FDEHSKEDGRAG*KMVQEREDVDA
Trigger: GGCATCTACGTCTTCACGCTCCTGGACCATTTTGCAGCCGGCACGTCCATCCTCTTTGGAGTGCTCATCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp GTTTGTTCGTGTCTCTCCCATTGCAGGATGACTTCCTaGGGTCTTCGTCTCTGCTCCCTCTACACCTTGAGC +
Preference number: 6 (lower is better)
Translates to: VCSCLSHCRMTS*GLRLCSLYTLS
Trigger: GCTCAAGGTGTAGAGGGAGCAGAGACGAAGACCCCAGGAAGTCATCCTGCAATGGGAGAGACACGAACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270349.12
ENST00000512002.2
ENST00000621716.2
ENST00000630314.1
CDS CCA 72 bp GGGGGCTGTCTGTGTTCATTGATCTGGGATTCCCCATaGAGTATCAAGGCAGCGATTCCACAGAACCAGAGG +
Preference number: 6 (lower is better)
Translates to: GGCLCSLIWDSP*SIKAAIPQNQR
Trigger: CCTCTGGTTCTGTGGAATCGCTGCCTTGATACTCCATGGGGAATCCCAGATCAATGAACACAGACAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511750.1
ENST00000626610.1
CDS TCA 72 bp GGAGCATTTGCTCTTACTCATGGGCACACTGGGAGTTaGGGAATTCTGTGCTTCTTCCCTCTTGGTCTGGCC +
Preference number: 6 (lower is better)
Translates to: GAFALTHGHTGS*GILCFFPLGLA
Trigger: GGCCAGACCAAGAGGGAAGAAGCACAGAATTCCTCAACTCCCAGTGTGCCCATGAGTAAGAGCAAATGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2
CDS CCA 72 bp GTCCCACGGAGCATTTGCTCTTACTCATGGGCACACTaGGAGTTGAGGAATTCTGTGCTTCTTCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: VPRSICSYSWAH*ELRNSVLLPSW
Trigger: CCAAGAGGGAAGAAGCACAGAATTCCTCAACTCCCAGTGTGCCCATGAGTAAGAGCAAATGCTCCGTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270349.12
ENST00000621716.2