RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103546

Ensembl transcript IDs: ENST00000219833.12, ENST00000219833.13, ENST00000379906.6, ENST00000414754.7, ENST00000561820.5, ENST00000566163.5, ENST00000567238.1, ENST00000568529.6, ENST00000568943.6, ENST00000574918.1, ENST00000574918.2, ENST00000682050.1

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAATCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGGGGTTCCTCCTTCTCCTCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: GIPRWCPRWERSGCL*PGHWHGGSSFSSRQ
Trigger: CTGCCTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp ACACAACAGCCTGTCAGGCTCCCTTTGGGCACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCC +
Preference number: 1 (lower is better)
Translates to: TQQPVRLPLGTHLAL*GQHGEDTHEASLGP
Trigger: GGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGGCTGTTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 90 bp CTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGC +
Preference number: 1 (lower is better)
Translates to: LTWSLPPFPQAGLRK*RWVSGLRVLQSKSS
Trigger: GCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp TGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGG +
Preference number: 1 (lower is better)
Translates to: WSLPPFPQAGLRKCR*VSGLRVLQSKSSMR
Trigger: CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp GCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTA +
Preference number: 1 (lower is better)
Translates to: APVSPGRSQEVQMGF*APCLTEQEQHEASV
Trigger: TACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp GCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGCTTGCCACGTGGCCTCCACCAGCTT +
Preference number: 1 (lower is better)
Translates to: ADGFLGSVSYRARAA*GLSRCGLPRGLHQL
Trigger: AAGCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp GGCCTCAGTAGATGTGGCTTGCCACGTGGCCTCCACCAGCTTGTCTaGTGCAGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACC +
Preference number: 1 (lower is better)
Translates to: GLSRCGLPRGLHQLV*CRYLLEPAHCGSFT
Trigger: GGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp GGCTGCTTGTCTCACCCTGCCCTCCAAGGTGCCACATCTAGTGCATaGGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTC +
Preference number: 1 (lower is better)
Translates to: GCLSHPALQGATSSA*EFLQPTLHFSRPLV
Trigger: GACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCACTAGATGTGGCACCTTGGAGGGCAGGGTGAGACAAGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 90 bp ACGTGGCCTCCACCAGCTTGTCTGATGCAGGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCCCCATATC +
Preference number: 1 (lower is better)
Translates to: TWPPPACLMQVPPRT*SLWFIYPLPPVPHI
Trigger: GATATGGGGGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp CCACCAGCTTGTCTGATGCAGGTACCTCCTAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCTCCTGTCCCCCATATCTCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: PPACLMQVPPRTCSL*FIYPLPPVPHISGP
Trigger: TGGCCCAGAGATATGGGGGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCTGCATCAGACAAGCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp AGGGCAGGCACCCCAAAAGTGACTTCACATTCACCAATGTTTCAGTaGCTTCTAAGACCACAGCAGAGCTGTGGATCCTGGGACTCACAG +
Preference number: 1 (lower is better)
Translates to: RAGTPKVTSHSPMFQ*LLRPQQSCGSWDSQ
Trigger: CTGTGAGTCCCAGGATCCACAGCTCTGCTGTGGTCTTAGAAGCCACTGAAACATTGGTGAATGTGAAGTCACTTTTGGGGTGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR CCA 90 bp TCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATTTCTaGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGCCACATCTAGTG +
Preference number: 1 (lower is better)
Translates to: SIHSQNSPLHLREYF*AACLTLPSKVPHLV
Trigger: CACTAGATGTGGCACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp AACCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTaGGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGG +
Preference number: 1 (lower is better)
Translates to: NHQTVPSTLKILPST*ESISGLLVSPCPPR
Trigger: CCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp TTGGGAGGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: LGGVSDQKPILSLIW*TKNSCAQSLGKCGG
Trigger: CCCACCACATTTGCCTAGACTTTGGGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 90 bp CCAATGTTTCAGTGGCTTCTAAGACCACAGCAGAGCTGTGGATCCTaGGACTCACAGGGTATGAAAATGTGTTACCCTCCAAAGCCTCAA +
Preference number: 1 (lower is better)
Translates to: PMFQWLLRPQQSCGS*DSQGMKMCYPPKPQ
Trigger: TTGAGGCTTTGGAGGGTAACACATTTTCATACCCTGTGAGTCCCAGGATCCACAGCTCTGCTGTGGTCTTAGAAGCCACTGAAACATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR TCA 90 bp AAGTTTGTATCAGAAGTAGATCCAAGTAGAAACCTAGAAATTCTCTaGAACCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCC +
Preference number: 1 (lower is better)
Translates to: KFVSEVDPSRNLEIL*NHQTVPSTLKILPS
Trigger: GGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGGTTTCAGAGAATTTCTAGGTTTCTACTTGGATCTACTTCTGATACAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 90 bp ACTATTGAATGTCCAGAAAAATCAAAGTTCTGGAGGCTAGAAATCTaGCATTTCTCTGATAGAGAGATCACTGGTCATCAGTTCATTTTG +
Preference number: 1 (lower is better)
Translates to: TIECPEKSKFWRLEI*HFSDREITGHQFIL
Trigger: CAAAATGAACTGATGACCAGTGATCTCTCTATCAGAGAAATGTCAGATTTCTAGCCTCCAGAACTTTGATTTTTCTGGACATTCAATAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.12
ENST00000574918.1
3UTR-3UTR TCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVRSGCL*PGHWHG
Trigger: CCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCG...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCGCCTCACTTGGTCCCTaGCCCCGTTTCCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPASLGP*PRFPRQ
Trigger: CTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGC...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTAGATGGTGTCCGAGGTaGGAGCGCAGCGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVRWCPR*ERSGCL
Trigger: CAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CAA 90 bp TGGCCTTGTGAGGACAGCACGGTGAAGACACACATGAGGCCTCACTaGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAG +
Preference number: 2 (lower is better)
Translates to: WPCEDSTVKTHMRPH*VPAPVSPGRSQEVQ
Trigger: CTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTCACAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGGCTGAGGTTCAGACATaGGAGGGCTGTCTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVAEVQT*EGCLGW
Trigger: CCACCCTAGACAGCCCTCTCATGTCTGAACCTCAGC...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGC +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLSVDVA*HVASTS
Trigger: GCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGA...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGAGGGCTGTCTAGGGTaGGCAAGAGGAGGGTCTATG +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLEGCLG*ARGGSM
Trigger: CATAGACCCTCCTCTTGCCCACCCTAGACAGCCCTC...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGAC +
Preference number: 2 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPTHLAL*GQHGED
Trigger: GTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGT...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTC +
Preference number: 2 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVRMPVT*TLAWGF
Trigger: GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCGGAGGAATCCCAAGATaGTGTCCGAGGTGGGAGCGC +
Preference number: 2 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPGGIPR*CPRWER
Trigger: GCGCTCCCACCTCGGACACCATCTTGGGATTCCTCC...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAG +
Preference number: 2 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQVQMGF*APCLTE
Trigger: CTCTGTAAGACACGGAGCCCAGAAACCCATCTGCAC...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVRSGCL*PGHWHG
Trigger: CCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 2 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVSPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGAGATGGTGTCCGAGGTaGGAGCGCAGCGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVRWCPR*ERSGCL
Trigger: CAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGG +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGRSGCL*PGHWHG
Trigger: CCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCAGATGGTGTCCGAGGTaGGAGCGCAGCGGATGCCTG +
Preference number: 2 (lower is better)
Translates to: KFSPPLERVFLGCLSHPARWCPR*ERSGCL
Trigger: CAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLLSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTATGTGGCTTGCCACGTaGCCTCCACCAGCTTGTCTG +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGMWLAT*PPPACL
Trigger: CAGACAAGCTGGTGGAGGCCACGTGGCAAGCCACAT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGACTGTCAGGCTCCCTTTaGGCACCCACCTGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGLSGSL*APTWPC
Trigger: ACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAG...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGC +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGRARAA*GLSRCG
Trigger: GCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTAC +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLVPPRT*SLWFIY
Trigger: GTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTAC...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTCTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTC +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGLRKCR*VSGLRV
Trigger: GACACGGAGCCCAGAAACCCATCTGCACTTCCTGAG...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCAGATGCACAGAAGGTaGACAAAAACTACAGTCACG +
Preference number: 2 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVQMHRR*TKTTVT
Trigger: CGTGACTGTAGTTTTTGTTCACCTTCTGTGCATCTG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGCTGAGGTTCAGACATaGGAGGGCTGTCTAGGGTGG +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGAEVQT*EGCLGW
Trigger: CCACCCTAGACAGCCCTCTCATGTCTGAACCTCAGC...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGC +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGSVDVA*HVASTS
Trigger: GCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGA...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQETWTLA*GFLLLL
Trigger: GAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGT...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRTWTLA*GFLLLL
Trigger: GAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTC +
Preference number: 2 (lower is better)
Translates to: KFSPPLERVFLGCLSHPARMPVT*TLAWGF
Trigger: GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCG...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAAGCAGGATCCCAAAGTaGGAGAGACTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLSRIPK*ERLPPK
Trigger: TTTTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCGGAGGAATCCCAAGATaGTGTCCGAGGTGGGAGCGC +
Preference number: 2 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLGGIPR*CPRWER
Trigger: GCGCTCCCACCTCGGACACCATCTTGGGATTCCTCC...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAGCAGGATCCCAAAGTaGGAGAGACTTCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGSRIPK*ERLPPK
Trigger: TTTTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTATCCTCTCTCTGATTTaGTGGACTAAGAACTCCTGT +
Preference number: 2 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVILSLI*WTKNSC
Trigger: ACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGAT...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTC +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLRKCR*VSGLRV
Trigger: GACACGGAGCCCAGAAACCCATCTGCACTTCCTGAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 2 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQESPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGLSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCGAGGGCTGTCTAGGGTaGGCAAGAGGAGGGTCTATG +
Preference number: 2 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLEGCLG*ARGGSM
Trigger: CATAGACCCTCCTCTTGCCCACCCTAGACAGCCCTC...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCTGTCAGGCTCCCTTTaGGCACCCACCTGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYLSGSL*APTWPC
Trigger: ACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTGAACTGGCTCCCAGCTaGGCGGTAACTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLELAPS*AVTPFE
Trigger: CTCAAAAGGAGTTACCGCTCAGCTGGGAGCCAGTTC...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000219833.12
ENST00000561820.5
ENST00000574918.1
3UTR-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 2 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAATCCTCTCTCTGATTTaGTGGACTAAGAACTCCTGT +
Preference number: 2 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLILSLI*WTKNSC
Trigger: ACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGAT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CAA 90 bp AAACCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTaGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: KPPNCSIHSQNSPLH*REYFWAACLTLPSK
Trigger: CTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCAGATGCACAGAAGGTaGACAAAAACTACAGTCACG +
Preference number: 2 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAQMHRR*TKTTVT
Trigger: CGTGACTGTAGTTTTTGTTCACCTTCTGTGCATCTG...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGC +
Preference number: 2 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHRARAA*GLSRCG
Trigger: GCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCT...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHAGLRK*RWVSGL
Trigger: GAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGC...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGAGGCTGTGCAGGTGTaGAAGAACAATAAATTAACA +
Preference number: 2 (lower is better)
Translates to: PPLERVFLGCLSHPALQGEAVQV*KNNKLT
Trigger: TGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHTWTLA*GFLLLL
Trigger: GAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGT...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp CTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTGAACTGGCTCCCAGCTaGGCGGTAACTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: LYAVLFPPHYTPSLFFSLELAPS*AVTPFE
Trigger: CTCAAAAGGAGTTACCGCTCAGCTGGGAGCCAGTTC...AAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000219833.12
ENST00000561820.5
ENST00000574918.1
3UTR-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCAGCCCATCCTCTCTCTaGTTTGGTGGACTAAGAACT +
Preference number: 2 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLSPSSL*FGGLRT
Trigger: AGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCGTGCATGAGAGTTTTTaGAGCCAACTCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAVHESF*SQLSIS
Trigger: AGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCAC...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 2 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp GACAGAGGGATGAGGGCAGGCACCCCAAAAGTGACTTCACATTCACCAATGTTTTGGAGGCTAGAAATCTaGCATTTCTCTGATAGAGAG +
Preference number: 2 (lower is better)
Translates to: DRGMRAGTPKVTSHSPMFWRLEI*HFSDRE
Trigger: CTCTCTATCAGAGAAATGTCAGATTTCTAGCCTCCA...AAACATTGGTGAATGTGAAGTCACTTTTGGGGTGCCTGCCCTCATCCCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR-3UTR TCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCCAGATGCACAGAAGGTaGACAAAAACTACAGTCACG +
Preference number: 2 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAQMHRR*TKTTVT
Trigger: CGTGACTGTAGTTTTTGTTCACCTTCTGTGCATCTG...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR TCA 90 bp AGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCAAGCGGTAACTCCTTTTaGGAATTAAGGCAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: SLTLARLENRSYSRNWLPSGNSF*ELRQLQ
Trigger: CTGAAGCTGCCTTAATTCTCAAAAGGAGTTACCGCT...TGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219833.12
ENST00000561820.5
3UTR-3UTR TCA 90 bp TTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAAGCGGTAACTCCTTTTaGGAATTAAGGCAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: FSATLHTFSVFLSSVAFESGNSF*ELRQLQ
Trigger: CTGAAGCTGCCTTAATTCTCAAAAGGAGTTACCGCT...TTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219833.12
ENST00000561820.5
3UTR-3UTR TCA 90 bp TGGGCTTCTTTACTAGGAAATGATTTCTTTGGTAAGAATGCTTCAGTCTCACATGAACTGGCTCCCAGCTaGGCGGTAACTCCTTTTGAG +
Preference number: 2 (lower is better)
Translates to: WASLLGNDFFGKNASVSHELAPS*AVTPFE
Trigger: CTCAAAAGGAGTTACCGCTCAGCTGGGAGCCAGTTC...ATGTGAGACTGAAGCATTCTTACCAAAGAAATCATTTCCTAGTAAAGAAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219833.12
ENST00000561820.5
ENST00000574918.1
3UTR-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATCCAGAGGGCACCAAGTaGAAGTTTGTATCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHPEGTK*KFVSEV
Trigger: TACTTCTGATACAAACTTGCACTTGGTGCCCTCTGG...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATGTGCATGAGAGTTTTTaGAGCCAACTCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHVHESF*SQLSIS
Trigger: AGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCAC...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 2 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFSPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR GCA 90 bp GACATTGGAACAGTCCATGACACAGAGAGGACACAATTGAAACAGTCTTTATTTGTCTGTAAAACTATATaGTGTGCTTTTTCCGCCACA +
Preference number: 2 (lower is better)
Translates to: DIGTVHDTERTQLKQSLFVCKTI*CAFSAT
Trigger: TGTGGCGGAAAAAGCACAGCATATAGTTTTACAGAC...AAATAAAGACTGTTTCAATTGTGTCCTCTCTGTGTCATGGACTGTTCCAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR CCA 72 bp GTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTCCTCCTTCTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VSEVGAQRMPVT*TLAWGFLLLLQ
Trigger: CTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGGTGGCCTCCACCAGCTaGTCTGATGCAGGTACCTCC +
Preference number: 3 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVVASTS*SDAGTS
Trigger: GGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCAC...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGTGGCCTCCACCAGCTaGTCTGATGCAGGTACCTCC +
Preference number: 3 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLVASTS*SDAGTS
Trigger: GGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCAC...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 72 bp AGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGGGGTTCCTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: RWCPRWERSGCL*PGHWHGGSSFS
Trigger: GGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 72 bp CCTGTCAGGCTCCCTTTGGGCACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGACACACATGAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: PVRLPLGTHLAL*GQHGEDTHEAS
Trigger: TGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 72 bp TCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGC +
Preference number: 3 (lower is better)
Translates to: SLPPFPQAGLRK*RWVSGLRVLQS
Trigger: GCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 72 bp CACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTaGCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCA +
Preference number: 3 (lower is better)
Translates to: HGEDTHEASLGP*PRFPRQVSGSA
Trigger: TGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp CCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: PPFPQAGLRKCR*VSGLRVLQSKS
Trigger: GCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp CACAACAGCCTGTCAGGCTCCCTTTGGGCACCCACCTaGCCTTGTGAGGACAGCACGGTGAAGACACACATG +
Preference number: 3 (lower is better)
Translates to: HNSLSGSLWAPT*PCEDSTVKTHM
Trigger: CATGTGTGTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGGCTGTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTCACATGAGGCCTCACTaGGTCCCTGCCCCCGTTTCC +
Preference number: 3 (lower is better)
Translates to: PPLERVFLGCLSHPALQGHMRPH*VPAPVS
Trigger: GGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTG...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 72 bp GAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGCTTGTCTGATGCAGGT +
Preference number: 3 (lower is better)
Translates to: EQEQHEASVDVA*HVASTSLSDAG
Trigger: ACCTGCATCAGACAAGCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGPVTWT*AWGFLL
Trigger: AAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGG...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: PPLERVFLGCLSHPALQGPVTWT*AWGFLL
Trigger: AAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGG...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 72 bp TTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGCTTGCCACGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: FLGSVSYRARAA*GLSRCGLPRGL
Trigger: GAGGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp TCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAG +
Preference number: 3 (lower is better)
Translates to: SPGRSQEVQMGF*APCLTEQEQHE
Trigger: CTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 72 bp CCACCAGCTTGTCTGATGCAGGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTACCCTCTTCCTCCTGTC +
Preference number: 3 (lower is better)
Translates to: PPACLMQVPPRT*SLWFIYPLPPV
Trigger: GACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCTGCATCAGACAAGCTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR GCA 72 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTaGTTGTCTCACCCTGCCCTCCAAGGTGCCACATCT +
Preference number: 3 (lower is better)
Translates to: KFSPPLERVFLG*LSHPALQGATS
Trigger: AGATGTGGCACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp TCTCAAAATTCTCCCCTCCACTTGAGAGAGTATTTCTaGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: SQNSPLHLREYF*AACLTLPSKVP
Trigger: TGGCACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp TGTCTGATGCAGGTACCTCCTAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCTCCTGTCCCCCATATC +
Preference number: 3 (lower is better)
Translates to: CLMQVPPRTCSL*FIYPLPPVPHI
Trigger: GATATGGGGGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCTGCATCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR-3UTR CAA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHPVTWT*AWGFLL
Trigger: AAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGG...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 72 bp TGGGAGGGGTATCTGATCAAAAGCCCATCCTCTCTCTaGTTTGGTGGACTAAGAACTCCTGTGCCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: WEGYLIKSPSSL*FGGLRTPVPKV
Trigger: GACTTTGGGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTaGTGGACTAAGAACTCCTGTGCCCAAAGTCTAGGC +
Preference number: 3 (lower is better)
Translates to: GVSDQKPILSLI*WTKNSCAQSLG
Trigger: GCCTAGACTTTGGGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CCA 72 bp ACCCCAAAAGTGACTTCACATTCACCAATGTTTCAGTaGCTTCTAAGACCACAGCAGAGCTGTGGATCCTGG +
Preference number: 3 (lower is better)
Translates to: TPKVTSHSPMFQ*LLRPQQSCGSW
Trigger: CCAGGATCCACAGCTCTGCTGTGGTCTTAGAAGCCACTGAAACATTGGTGAATGTGAAGTCACTTTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR GCA 72 bp GCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATaGTGTGCTTTTTCCGCCACACTACACACCTTCTCT +
Preference number: 3 (lower is better)
Translates to: ASQLQTQVCKTI*CAFSATLHTFS
Trigger: AGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219833.12
ENST00000561820.5
ENST00000574918.1
3UTR CCA 72 bp GTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCCCAAAGTCTAGGCAAA +
Preference number: 3 (lower is better)
Translates to: VSDQKPILSLIW*TKNSCAQSLGK
Trigger: TTTGCCTAGACTTTGGGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR TCA 72 bp ACATTGGAACAGTCCATGACACAGAGAGGACACAATTaGAACAGTCTTTATTTACACGGAAGCAGAGAGACA +
Preference number: 3 (lower is better)
Translates to: TLEQSMTQRGHN*NSLYLHGSRET
Trigger: TGTCTCTCTGCTTCCGTGTAAATAAAGACTGTTTCAATTGTGTCCTCTCTGTGTCATGGACTGTTCCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219833.12
3UTR GCA 72 bp GAACAACTTTTAAAATCCATATCAGACACAGAAATCTaGATGACATTGGAACAGTCCATGACACAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: EQLLKSISDTEI*MTLEQSMTQRG
Trigger: TCCTCTCTGTGTCATGGACTGTTCCAATGTCATGCAGATTTCTGTGTCTGATATGGATTTTAAAAGTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219833.12
CDS-3UTR GCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGCGAGGGGATCCCTGGTaGCTTGCGCCCTGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVRGDPW*LAPCRP
Trigger: GGGCCGGCAGGGCGCAAGGCACCAGGGATCCCCTCG...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS-3UTR CCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCGGCGCCAGCAGGCACTaGACGCCGTTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFGASRH*TPLRSF
Trigger: GAAGGAGCGCAACGGCGTCCAGTGCCTGCTGGCGCC...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCGGCGAGGGGATCCCTaGTGCCTTGCGCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVRRGDP*CLAPCR
Trigger: CCGGCAGGGCGCAAGGCACCAGGGATCCCCTCGCCG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS-3UTR GCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCCGCGCCCGAAGGGGCTaGTCTGGACCCGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPRARRG*SGPVSA
Trigger: GGCGGACACGGGTCCAGAGCAGCCCCTTCGGGCGCG...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTGCAGCTCCGCAGTTTTaGGCGCCCGAAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSAAPQF*APEGAA
Trigger: AGCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGC...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCCGAAGGGGCTGCTCTaGACCCGTGTCCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVPKGLL*TRVRPV
Trigger: AACGGGGCGGACACGGGTCCAGAGCAGCCCCTTCGG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTGGGCACCAGGACCATaGAGGACAGGGCGATGCCCC +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVWAPGP*RTGRCP
Trigger: GGGGCATCGCCCTGTCCTCCATGGTCCTGGTGCCCA...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR TCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGATCCCGCTGCTCTCGTaGAGGTGCAGGACACCACGC +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVIPLLS*RCRTPR
Trigger: GCGTGGTGTCCTGCACCTTCACGAGAGCAGCGGGAT...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGCTCCATGCCTCCCATTaGGCTGTCAAGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVLHASH*AVKAQR
Trigger: GCGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAG...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGCGCAGCGGATGCCTGTaGCCTGGACATTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQRSGCL*PGHWHG
Trigger: CCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCG...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTATCCCGCTGCTCTCGTaGAGGTGCAGGACACCACGC +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIIPLLS*RCRTPR
Trigger: GCGTGGTGTCCTGCACCTTCACGAGAGCAGCGGGAT...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTTGTCTGATGTCCCTCTaGGCCACCAGGTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSCLMSL*ATRWCS
Trigger: CGAGCACCACCTGGTGGCTCAGAGGGACATCAGACA...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSTHLAL*GQHGED
Trigger: GTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGT...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCCGCGCCCGAAGGGGCTaGTCTGGACCCGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICRARRG*SGPVSA
Trigger: GGCGGACACGGGTCCAGAGCAGCCCCTTCGGGCGCG...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGGTTGGCCAGGTCCACTaGGAAGCCGACTACGGACAG +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVVGQVH*EADYGQ
Trigger: CTGTCCGTAGTCGGCTTCGCAGTGGACCTGGCCAAC...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTTCCGCGCCAGAAGCATaGATGCGGCTGGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDISAPEA*MRLARG
Trigger: TCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGA...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTTGGGGTCGGTACAGTTaGGGCTGTTCCAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSWGRYS*GCSRCG
Trigger: GCCACACCTGGAACAGCCCCAACTGTACCGACCCCA...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCGTGGTGCTCGTTCTCTaGCGTGATGCCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFVVLVL*RDAIGQ
Trigger: CTGGCCTATGGCATCACGCCAGAGAACGAGCACCAC...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGGAGGAATCCCAAGATaGTGTCCGAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQGGIPR*CPRWER
Trigger: GCGCTCCCACCTCGGACACCATCTTGGGATTCCTCC...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGAACTTTACCGGTCCTaGGGGCACGCCGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIELYRS*GHAEAV
Trigger: CACAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTC...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS-3UTR TCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGGGGATGAGCGCGCGCTaGGCGGACGCAGGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEGMSAR*ADAGFP
Trigger: TGGGAACCCTGCGTCCGCTCAGCGCGCGCTCATCCC...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR TCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGAAGGCAGCGTGGCTGTaGTCCACACCACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLKAAWL*STPPFL
Trigger: CAGGAAAGGTGGTGTGGATCACAGCCACGCTGCCTT...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGCCAGCGCCAGGAGCATaGCGAAAAACACAACAGCCC +
Preference number: 4 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLPAPGA*RKTQQP
Trigger: GGGCTGTTGTGTTTTTCGTCATGCTCCTGGCGCTGG...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGGAGGAAGGCAGGACTaGCGAACTTCCAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQGGRQD*RTSSTV
Trigger: GACTGTGCTGGAAGTTCGTCAGTCCTGCCTTCCTCC...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTGCTCGTTCTCTGGCGTaGTGCCATAGGCCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSARSLA*CHRPVS
Trigger: TGAGACTGGCCTATGGCATCACGCCAGAGAACGAGC...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS-3UTR GCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGACCTGGAAGTCATCTaGCAGGCCCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQDLEVI*QARDDS
Trigger: GCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTC...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTATGGAGGACAGGGCGATaGCCCACCCCACCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLWRTGR*PTPPSW
Trigger: CCAACTGGGTGGGGTGGGGCATCGCCCTGTCCTCCA...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR GCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSSVDVA*HVASTS
Trigger: GCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGA...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCGAACTTTACCGGTCCTaGGGGCACGCCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPELYRS*GHAEAL
Trigger: CAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTC...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLRMPVT*TLAWGF
Trigger: GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCG...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTGAGGGCTGTCTAGGGTaGGCAAGAGGAGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSEGCLG*ARGGSM
Trigger: CATAGACCCTCCTCTTGCCCACCCTAGACAGCCCTC...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGACTCGGCTGCCGGCGTaGACTTGTACTTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQTRLPA*TCTWST
Trigger: AGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGT...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAAGGCTCCGGGCAGCGTaGCGCCATGGACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQRLRAA*RHGPGA
Trigger: TGCTCCTGGTCCATGGCGTCACGCTGCCCGGAGCCT...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCCAGCGCCAGGAGCATaGCGAAAAACACAACAGCCC +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVPAPGA*RKTQQP
Trigger: GGGCTGTTGTGTTTTTCGTCATGCTCCTGGCGCTGG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCCTCCATGCCTCCCATTaGGCTGTCAAGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVALHASH*AVKAQR
Trigger: GCGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAG...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGCTCGTTCTCTGGCGTaGTGCCATAGGCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIARSLA*CHRPVS
Trigger: AGAGACTGGCCTATGGCATCACGCCAGAGAACGAGC...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCCGAAGGGGCTGCTCTaGACCCGTGTCCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVPKGLL*TRVRPV
Trigger: AACGGGGCGGACACGGGTCCAGAGCAGCCCCTTCGG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCCCGAAGGGGCTGCTCTaGACCCGTGTCCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICPKGLL*TRVRPV
Trigger: AACGGGGCGGACACGGGTCCAGAGCAGCCCCTTCGG...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDICRFRT*KSSARP
Trigger: GGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACA...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGTGGTGCTCGTTCTCTaGCGTGATGCCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIVVLVL*RDAIGQ
Trigger: CTGGCCTATGGCATCACGCCAGAGAACGAGCACCAC...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCCTTTGGGCACCCACCTaGCCTTGTGAGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPLWAPT*PCEDST
Trigger: CGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAG...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCCTGTCAGGCTCCCTTTaGGCACCCACCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPLSGSL*APTWPC
Trigger: ACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAG...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTACTGGTCCACTCCAGGTaGGATCCCCAGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLLVHSR*DPQREA
Trigger: AGCCTCCCTCTGGGGATCCCACCTGGAGTGGACCAG...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTACAGGGCGATCAGGATaGCAGCATAGCCAACGCCTT +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDITGRSG*QHSQRL
Trigger: AAGGCGTTGGCTATGCTGTCATCCTGATCGCCCTGT...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTCCACACCACCTTTCCTaGTGTCTTCACCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSPHHLS*CLHPFP
Trigger: TGGAAAGGGGTGAAGACATCAGGAAAGGTGGTGTGG...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCAAGGCAGCGTGGCTGTaGTCCACACCACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPKAAWL*STPPFL
Trigger: CAGGAAAGGTGGTGTGGATCACAGCCACGCTGCCTT...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTAGGCTCCGGGCAGCGTaGCGCCATGGACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGRLRAA*RHGPGA
Trigger: TGCTCCTGGTCCATGGCGTCACGCTGCCCGGAGCCT...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCATTCTCCCCTCCACTTaGGAGAGTATTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFILPST*ESISGL
Trigger: CAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAAT...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCACAGGGCGATCAGGATaGCAGCATAGCCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPTGRSG*QHSQRL
Trigger: CAGGCGTTGGCTATGCTGTCATCCTGATCGCCCTGT...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS-3UTR GCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGAGCAGCTCCGCAGTTTTaGGCGCCCGAAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGAAPQF*APEGAA
Trigger: AGCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGC...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTGTCATGAATCCCGCTaGTCTCGTGAAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVCHESR*SREGAG
Trigger: TCCTGCACCTTCACGAGAGCAGCGGGATTCATGACA...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCAGACAGAGCAAGAGCTaGCACTGGGGCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVARQSKS*HWGRPM
Trigger: CATCGGCCTGCCCCAGTGGCAGCTCTTGCTCTGTCT...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGTGGAGGACAGGGCGATaGCCCACCCCACCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRWRTGR*PTPPSW
Trigger: CCAACTGGGTGGGGTGGGGCATCGCCCTGTCCTCCA...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR GCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPSVDVA*HVASTS
Trigger: GCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGA...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGAGCCTCACTTGGTCCCTaGCCCCGTTTCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGASLGP*PRFPRQ
Trigger: CTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGC...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGAGAGTATTTCTGGGCTaGTTGTCTCACCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQRVFLG*LSHPAL
Trigger: GAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCT...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGTTGGAGTACTTGGTGTaGTTGCCAAGCACGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLLEYLV*LPSTEP
Trigger: TGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAA...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPCRFRT*KSSARP
Trigger: GGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACA...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTGGACAGCAAAAAGGATaGAGGTGCCCGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVGQQKG*RCPQQR
Trigger: CCTTTGCTGCGGGCACCTCCATCCTTTTTGCTGTCC...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGATCCCGCTGCTCTCGTaGAGGTGCAGGACACCACGC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRIPLLS*RCRTPR
Trigger: GCGTGGTGTCCTGCACCTTCACGAGAGCAGCGGGAT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAAGGCTCCGGGCAGCGTaGCGCCATGGACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHERLRAA*RHGPGA
Trigger: TGCTCCTGGTCCATGGCGTCACGCTGCCCGGAGCCT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCTGTGCTTAGGCTCCGGGCAGCGTaGCGCCATGGACCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ATQLVSCRPKSVKLYAVLRLRAA*RHGPGA
Trigger: TGCTCCTGGTCCATGGCGTCACGCTGCCCGGAGCCT...AAGCACAGCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCCTCCATGCCTCCCATTaGGCTGTCAAGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICLHASH*AVKAQR
Trigger: GCGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAG...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTGCTGGATGTCGTTGCTaGACCTGTCCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSAGCRC*TCPLHK
Trigger: TTTATGGAGTGGACAGGTTCAGCAACGACATCCAGC...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCAGCCCATCCTCTCTCTaGTTTGGTGGACTAAGAACT +
Preference number: 4 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFSPSSL*FGGLRT
Trigger: AGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCT...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCCGTTGTTCTCGGGCTaGACCTGCGGGTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVPLFSG*TCGFIR
Trigger: GCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCCGTTGTTCTCGGGCTaGACCTGCGGGTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEPLFSG*TCGFIR
Trigger: GCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGG...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCCCGTTGTTCTCGGGCTaGACCTGCGGGTTCATCCGC +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICPLFSG*TCGFIR
Trigger: GCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGG...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCGACCTGGAAGTCATCTaGCAGGCCCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVADLEVI*QARDDS
Trigger: GCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTC...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGGGCAGCGTGACGCCATaGACCAGGAGCACGAACAGC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRGSVTP*TRSTNS
Trigger: GCTGTTCGTGCTCCTGGTCCATGGCGTCACGCTGCC...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGGCAGCGTGACGCCATaGACCAGGAGCACGAACAGC +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQGSVTP*TRSTNS
Trigger: GCTGTTCGTGCTCCTGGTCCATGGCGTCACGCTGCC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAGTGGTGCTCGTTCTCTaGCGTGATGCCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLVVLVL*RDAIGQ
Trigger: CTGGCCTATGGCATCACGCCAGAGAACGAGCACCAC...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGAGCCAGTGTTGCAACTaGAACTGTCTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLSQCCN*NCLMSL
Trigger: GAGGGACATCAGACAGTTCCAGTTGCAACACTGGCT...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAAGATGGTGTCCGAGGTaGGAGCGCAGCGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQRWCPR*ERSGCL
Trigger: CAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTAGCAGGATCCCAAAGTaGGAGAGACTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSSRIPK*ERLPPK
Trigger: TTTTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCT...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGAGCAGGATCCCAAAGTaGGAGAGACTTCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVSRIPK*ERLPPK
Trigger: TTTTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCT...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVVQMGF*APCLTE
Trigger: CTCTGTAAGACACGGAGCCCAGAAACCCATCTGCAC...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCTGGTCCACTCCAGGTaGGATCCCCAGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQELVHSR*DPQREA
Trigger: AGCCTCCCTCTGGGGATCCCACCTGGAGTGGACCAG...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGACAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGQARSH*GAWGRY
Trigger: GTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTG...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCACTCGGCTGCCGGCGTaGACTTGTACTTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVATRLPA*TCTWST
Trigger: AGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGT...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTCCATGCCTCCCATTaGGCTGTCAAGGCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLHASH*AVKAQR
Trigger: GCGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGCTGGATGTCGTTGCTaGACCTGTCCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIAGCRC*TCPLHK
Trigger: TTTATGGAGTGGACAGGTTCAGCAACGACATCCAGC...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGTGTCTGATGTCCCTCTaGGCCACCAGGTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRCLMSL*ATRWCS
Trigger: CGAGCACCACCTGGTGGCTCAGAGGGACATCAGACA...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGGCTGAGGTTCAGACATaGGAGGGCTGTCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGAEVQT*EGCLGW
Trigger: CCACCCTAGACAGCCCTCTCATGTCTGAACCTCAGC...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVTHLAL*GQHGED
Trigger: GTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCTTCTCGGGCTGCACCTaGGGGTTCATCCGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAFSGCT*GFIRAR
Trigger: TCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAA...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATCGCGCCCGAAGGGGCTaGTCTGGACCCGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHRARRG*SGPVSA
Trigger: GGCGGACACGGGTCCAGAGCAGCCCCTTCGGGCGCG...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGCTCATAAAACTCGGCTaGCGGCGTGAACTTGTACTT +
Preference number: 4 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVLIKLG*RRELVL
Trigger: AAGTACAAGTTCACGCCGGCAGCCGAGTTTTATGAG...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCTGTCATGAATCCCGCTaGTCTCGTGAAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPCHESR*SREGAG
Trigger: TCCTGCACCTTCACGAGAGCAGCGGGATTCATGACA...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAAGACAGAGCAAGAGCTaGCACTGGGGCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQRQSKS*HWGRPM
Trigger: CATCGGCCTGCCCCAGTGGCAGCTCTTGCTCTGTCT...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCAGCTGAGCGGGAACTTTACCGGTCCTaGGGGCACGCCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LARLENRSYSRNWLPAERELYRS*GHAEAL
Trigger: CAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTC...CCGCTCAGCTGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTGGCGCCAGCAGGCACTaGACGCCGTTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLGASRH*TPLRSF
Trigger: GAAGGAGCGCAACGGCGTCCAGTGCCTGCTGGCGCC...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGTGGGGTCGGTACAGTTaGGGCTGTTCCAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVWGRYS*GCSRCG
Trigger: GCCACACCTGGAACAGCCCCAACTGTACCGACCCCA...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTCATCAATCCATACCGTaGCCTCTTTCAAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSHQSIP*PLSSGR
Trigger: TCTACCGCTTGAAAGAGGCCACGGTATGGATTGATG...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTCGTAAATTCCACCCTTaGTTATGCAGAACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSAADACDLDIGMGVPPSRKFHP*LCRTGR
Trigger: TCGCCCTGTTCTGCATAACCAAGGGTGGAATTTACG...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAGGACAGCAAAAAGGATaGAGGTGCCCGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLGQQKG*RCPQQR
Trigger: CCTTTGCTGCGGGCACCTCCATCCTTTTTGCTGTCC...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCAGATGGTGTCCGAGGTaGGAGCGCAGCGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSRWCPR*ERSGCL
Trigger: CAGGCATCCGCTGCGCTCCCACCTCGGACACCATCT...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGGGAGGAATCCCAAGATaGTGTCCGAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRGGIPR*CPRWER
Trigger: GCGCTCCCACCTCGGACACCATCTTGGGATTCCTCC...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGGAGGAATCCCAAGATaGTGTCCGAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVGGIPR*CPRWER
Trigger: GCGCTCCCACCTCGGACACCATCTTGGGATTCCTCC...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp ACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 4 (lower is better)
Translates to: THMRPHLVPAPVSPGRSQKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...CTGAGACCTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGAGGGCTGTCTAGGGTaGGCAAGAGGAGGGTCTATG +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGEGCLG*ARGGSM
Trigger: CATAGACCCTCCTCTTGCCCACCCTAGACAGCCCTC...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAACTGTCAGGCTCCCTTTaGGCACCCACCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQLSGSL*APTWPC
Trigger: ACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAG...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGACCTCTCCTTGGGTGTaGCTCCACCACTGCACTCCC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRTSPWV*LHHCTP
Trigger: GGGAGTGCAGTGGTGGAGCCACACCCAAGGAGAGGT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS-3UTR TCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCCAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSQARSH*GAWGRY
Trigger: GTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTG...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGACTCGGCTGCCGGCGTaGACTTGTACTTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGTRLPA*TCTWST
Trigger: AGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGT...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTACCACACCACCTTTCCTaGTGTCTTCACCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLPHHLS*CLHPFP
Trigger: TGGAAAGGGGTGAAGACATCAGGAAAGGTGGTGTGG...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGTGTGCAGGTAGGCATTaGTGCCATTGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRCAGRH*CHWRLR
Trigger: CCGGAGCCTCCAATGGCATCAATGCCTACCTGCACA...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCAGCGCCAGGAGCATaGCGAAAAACACAACAGCCC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRPAPGA*RKTQQP
Trigger: GGGCTGTTGTGTTTTTCGTCATGCTCCTGGCGCTGG...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGGGAGGAAGGCAGGACTaGCGAACTTCCAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEGGRQD*RTSSTV
Trigger: GACTGTGCTGGAAGTTCGTCAGTCCTGCCTTCCTCC...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTGAGGTTCAGACATaGGAGGGCTGTCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVAEVQT*EGCLGW
Trigger: CCACCCTAGACAGCCCTCTCATGTCTGAACCTCAGC...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGGCAGCTCCGCAGTTTTaGGCGCCCGAAGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKAAPQF*APEGAA
Trigger: AGCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGC...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCTCATAAAACTCGGCTaGCGGCGTGAACTTGTACTT +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVLIKLG*RRELVL
Trigger: AAGTACAAGTTCACGCCGGCAGCCGAGTTTTATGAG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGGACCTGGAAGTCATCTaGCAGGCCCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEDLEVI*QARDDS
Trigger: GCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTC...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGG +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGKHGCG*REELYR
Trigger: CCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCTGTACTTGGAGTACTTaGTGTGGTTGCCAAGCACGG +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPCTWST*CGCQAR
Trigger: CCGTGCTTGGCAACCACACCAAGTACTCCAAGTACA...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTGGGCACCAGGACCATaGAGGACAGGGCGATGCCCC +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLWAPGP*RTGRCP
Trigger: GGGGCATCGCCCTGTCCTCCATGGTCCTGGTGCCCA...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGACGGATGCCTGTGACCTaGACATTGGCATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGRMPVT*TLAWGF
Trigger: GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCG...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 4 (lower is better)
Translates to: SQDGVRGGSAADACDLDIKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTTTGGGCACCCACCTaGCCTTGTGAGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLWAPT*PCEDST
Trigger: CGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTGTCAGGCTCCCTTTaGGCACCCACCTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLSGSL*APTWPC
Trigger: ACAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCATTTCTCAAGACCCCTaGTCCACTCCAGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVAISQDP*STPGGI
Trigger: GATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAAT...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCAGCATAGCCAACGCCTaGGCAGGGACAGGGGGTAAG +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPASIANA*AGTGGK
Trigger: CTTACCCCCTGTCCCTGCCCAGGCGTTGGCTATGCT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS-3UTR TCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAAGTATAGACCCGGCCTaGACCCCATCATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQSIDPA*TPSSAG
Trigger: TCCAGCAGATGATGGGGTTCAGGCCGGGTCTATACT...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGCTCGTTCTCTGGCGTaGTGCCATAGGCCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGARSLA*CHRPVS
Trigger: AGAGACTGGCCTATGGCATCACGCCAGAGAACGAGC...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR TCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGCAACTGGAACTGTCTaGTGTCCCTCTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQATGTV*CPSEPP
Trigger: TGGTGGCTCAGAGGGACATCAGACAGTTCCAGTTGC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVRARAA*GLSRCG
Trigger: GCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCAACCTAGAAATTCTCTaGAACCACCAAACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFNLEIL*NHQTVP
Trigger: TGGAACAGTTTGGTGGTTTCAGAGAATTTCTAGGTT...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCCCGTTCCTCCCTACTTaGAACTCCCAAGACCACCCG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSPFLPT*NSQDHP
Trigger: CGGGTGGTCTTGGGAGTTGCAAGTAGGGAGGAACGG...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR GCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGTGTCATGAATCCCGCTaGTCTCGTGAAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGCHESR*SREGAG
Trigger: TCCTGCACCTTCACGAGAGCAGCGGGATTCATGACA...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVASPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLSPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTAC +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVVPPRT*SLWFIY
Trigger: GTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTAC...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCGAGCGCCTTAGACACTaGGATGAGCGCGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAERLRH*DERALS
Trigger: GCTCAGCGCGCGCTCATCCCAGTGTCTAAGGCGCTC...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGAGATTTTCCAAACGGTaGCAGCCCCCTCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRRFSKR*QPPPGC
Trigger: ACAACCGGGAGGGGGCTGCCACCGTTTGGAAAATCT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGTTGGAGTACTTGGTGTaGTTGCCAAGCACGGAGCCA +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGLEYLV*LPSTEP
Trigger: TGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAA...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCGGCAGCGTGACGCCATaGACCAGGAGCACGAACAGC +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSGSVTP*TRSTNS
Trigger: GCTGTTCGTGCTCCTGGTCCATGGCGTCACGCTGCC...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAAGCCAGTGTTGCAACTaGAACTGTCTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLSQCCN*NCLMSL
Trigger: GAGGGACATCAGACAGTTCCAGTTGCAACACTGGCT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCATGTGGCTTGCCACGTaGCCTCCACCAGCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSMWLAT*PPPACL
Trigger: CAGACAAGCTGGTGGAGGCCACGTGGCAAGCCACAT...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCATGTGGCTTGCCACGTaGCCTCCACCAGCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAMWLAT*PPPACL
Trigger: CAGACAAGCTGGTGGAGGCCACGTGGCAAGCCACAT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGACTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGLRKCR*VSGLRV
Trigger: GACACGGAGCCCAGAAACCCATCTGCACTTCCTGAG...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCCAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAQARSH*GAWGRY
Trigger: GTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTG...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTCAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLQARSH*GAWGRY
Trigger: GTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTG...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTAGTATAGACCCGGCCTaGACCCCATCATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGSIDPA*TPSSAG
Trigger: TCCAGCAGATGATGGGGTTCAGGCCGGGTCTATACT...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTCTGATGTCCCTCTaGGCCACCAGGTGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSCLMSL*ATRWCS
Trigger: CGAGCACCACCTGGTGGCTCAGAGGGACATCAGACA...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCGCAACTGGAACTGTCTaGTGTCCCTCTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAATGTV*CPSEPP
Trigger: TGGTGGCTCAGAGGGACATCAGACAGTTCCAGTTGC...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCTTTGCTCCTCTCCTCTaGGCTAACAGCCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLFAPLL*ANSPQA
Trigger: GGCCTGGGGGCTGTTAGCTCAGAGGAGAGGAGCAAA...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAGCTGAGGTTCAGACATaGGAGGGCTGTCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEAEVQT*EGCLGW
Trigger: CCACCCTAGACAGCCCTCTCATGTCTGAACCTCAGC...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCACCCACCTGGCCTTGTaGGGACAGCACGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLTHLAL*GQHGED
Trigger: GTCTTCACCGTGCTGTCCTCACAAGGCCAGGTGGGT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGTTCCACCCTTGGTTATaGAGAACAGGGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGFHPWL*RTGREG
Trigger: TCCTTCTCGCCCTGTTCTGCATAACCAAGGGTGGAA...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCAAAAAGGATGGAGGTaGCCGCAGCAAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRQKGWR*PQQRCP
Trigger: TGGACACCTTTGCTGCGGGCACCTCCATCCTTTTTG...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAAAAAGGATGGAGGTaGCCGCAGCAAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEQKGWR*PQQRCP
Trigger: TGGACACCTTTGCTGCGGGCACCTCCATCCTTTTTG...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp ATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGTGGAGGACAGGGCGATaGCCCACCCCACCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: ICCAFSATLHTFSVFLSSWRTGR*PTPPSW
Trigger: CCAACTGGGTGGGGTGGGGCATCGCCCTGTCCTCCA...CGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGAGLRK*RWVSGL
Trigger: GAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGC...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGTTTGGAAACAGAGGTTaGGGCACGCCGGAACTCAAG +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEFGNRG*GTPELK
Trigger: CTTGAGTTCCGGCGTGCCCCAACCTCTGTTTCCAAA...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCTGGGGTCGGTACAGTTaGGGCTGTTCCAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAWGRYS*GCSRCG
Trigger: GCCACACCTGGAACAGCCCCAACTGTACCGACCCCA...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGTGTACTTGGAGTACTTaGTGTGGTTGCCAAGCACGG +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGCTWST*CGCQAR
Trigger: CCGTGCTTGGCAACCACACCAAGTACTCCAAGTACA...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTACATCAATCCATACCGTaGCCTCTTTCAAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLHQSIP*PLSSGR
Trigger: TCTACCGCTTGAAAGAGGCCACGGTATGGATTGATG...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAACCCCATCATCTGCTaGATGTCGTTGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGNPIIC*MSLLNL
Trigger: CAGGTTCAGCAACGACATCCAGCAGATGATGGGGTT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCGTCGTCGTAGGTGAGTaGCTTGAAGTTGATGATGCT +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVAVVVGE*LEVDDA
Trigger: AGCATCATCAACTTCAAGCCACTCACCTACGACGAC...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAAAGTCTAGGCAAATGTaGTGGGGATTTCCGACCTCA +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLKSRQM*WGFPTS
Trigger: TGAGGTCGGAAATCCCCACCACATTTGCCTAGACTT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEVQMGF*APCLTE
Trigger: CTCTGTAAGACACGGAGCCCAGAAACCCATCTGCAC...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCCTCAGGAAGTGCAGATaGGTTTCTGGGCTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSLRKCR*VSGLRV
Trigger: GACACGGAGCCCAGAAACCCATCTGCACTTCCTGAG...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCTGGTCCACTCCAGGTaGGATCCCCAGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYLVHSR*DPQREA
Trigger: AGCCTCCCTCTGGGGATCCCACCTGGAGTGGACCAG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTATTGAGAGAGTATTTCTaGGCTGCTTGTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLLREYF*AACLTL
Trigger: CAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAA...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCTTGAGAGAGTATTTCTaGGCTGCTTGTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVALREYF*AACLTL
Trigger: CAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAA...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCCCACACCACCTTTCCTaGTGTCTTCACCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSPHHLS*CLHPFP
Trigger: TGGAAAGGGGTGAAGACATCAGGAAAGGTGGTGTGG...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCAAGGCAGCGTGGCTGTaGTCCACACCACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSKAAWL*STPPFL
Trigger: CAGGAAAGGTGGTGTGGATCACAGCCACGCTGCCTT...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCTGTGCAGGTAGGCATTaGTGCCATTGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLCAGRH*CHWRLR
Trigger: CCGGAGCCTCCAATGGCATCAATGCCTACCTGCACA...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTGTGCAGGTAGGCATTaGTGCCATTGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLCAGRH*CHWRLR
Trigger: CCGGAGCCTCCAATGGCATCAATGCCTACCTGCACA...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCTGTGCAGGTAGGCATTaGTGCCATTGGAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCACAGRH*CHWRLR
Trigger: CCGGAGCCTCCAATGGCATCAATGCCTACCTGCACA...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCACATCCTCAATGTTaGCCTTGTGTTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRPHPQC*PCVHGP
Trigger: TGGCCCATGAACACAAGGTCAACATTGAGGATGTGG...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCCCACATCCTCAATGTTaGCCTTGTGTTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICPHPQC*PCVHGP
Trigger: TGGCCCATGAACACAAGGTCAACATTGAGGATGTGG...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAAGTATAGACCCGGCCTaGACCCCATCATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHESIDPA*TPSSAG
Trigger: TCCAGCAGATGATGGGGTTCAGGCCGGGTCTATACT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCGGAGGAAGGCAGGACTaGCGAACTTCCAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLGGRQD*RTSSTV
Trigger: GACTGTGCTGGAAGTTCGTCAGTCCTGCCTTCCTCC...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAGCCCATCCTCTCTCTaGTTTGGTGGACTAAGAACT +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGSPSSL*FGGLRT
Trigger: AGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHERARAA*GLSRCG
Trigger: GCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTAACCTAGAAATTCTCTaGAACCACCAAACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVNLEIL*NHQTVP
Trigger: TGGAACAGTTTGGTGGTTTCAGAGAATTTCTAGGTT...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGGGGTAGTTTCAAGATaGAACCGTTCCACCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQGVVSR*NRSTSG
Trigger: ACCTGAGGTGGAACGGTTTCATCTTGAAACTACCCC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS-3UTR GCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCCGCCAGAAGCATGGATaGGGCTGGCGAGAGGAACTT +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCARQKHG*GWREEL
Trigger: AAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCG...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATGTTGGCCAGGTCCACTaGGAAGCCGACTACGGACAG +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYVGQVH*EADYGQ
Trigger: CTGTCCGTAGTCGGCTTCGCAGTGGACCTGGCCAAC...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATAGACAGAGCAAGAGCTaGCACTGGGGCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYRQSKS*HWGRPM
Trigger: CATCGGCCTGCCCCAGTGGCAGCTCTTGCTCTGTCT...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCAAGACAGAGCAAGAGCTaGCACTGGGGCAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: SLTLARLENRSYSRNWLPRQSKS*HWGRPM
Trigger: CATCGGCCTGCCCCAGTGGCAGCTCTTGCTCTGTCT...TGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGGACCTGGAAGTCATCTaGCAGGCCCGTGATGACAGC +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKDLEVI*QARDDS
Trigger: GCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTC...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGAGCCCCCAGGCCAGATaGACAGAAGGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVSPQAR*TEGEQK
Trigger: TTTTTGTTCACCTTCTGTGCATCTGGCCTGGGGGCT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEAGLRK*RWVSGL
Trigger: GAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGC...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCGTGCATGAGAGTTTTTaGAGCCAACTCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPVHESF*SQLSIS
Trigger: AGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCAC...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCAGGGCGCGCGTCCGCTaGAAAAATTTGGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSRARVR*KNLETE
Trigger: CTCTGTTTCCAAATTTTTCCAGCGGACGCGCGCCCT...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp TTCAGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCTCCGCGCCAGAAGCATaGATGCGGCTGGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSLTLARLENRSYSRNWLSAPEA*MRLARG
Trigger: TCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGA...GAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAAGATTTTCCAAACGGTaGCAGCCCCCTCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHERFSKR*QPPPGC
Trigger: ACAACCGGGAGGGGGCTGCCACCGTTTGGAAAATCT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp TTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAATGGGGTCGGTACAGTTaGGGCTGTTCCAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FSATLHTFSVFLSSVAFEWGRYS*GCSRCG
Trigger: GCCACACCTGGAACAGCCCCAACTGTACCGACCCCA...TTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCTGTACTTGGAGTACTTaGTGTGGTTGCCAAGCACGG +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICCTWST*CGCQAR
Trigger: CCGTGCTTGGCAACCACACCAAGTACTCCAAGTACA...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCACRFRT*KSSARP
Trigger: GGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACA...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCGTGCAGATGGGTTTCTaGGCTCCGTGTCTTACAGAG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSVQMGF*APCLTE
Trigger: CTCTGTAAGACACGGAGCCCAGAAACCCATCTGCAC...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCTTTGGGCACCCACCTaGCCTTGTGAGGACAGCACG +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYLWAPT*PCEDST
Trigger: CGTGCTGTCCTCACAAGGCCAGGTGGGTGCCCAAAG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCATTTCTCAAGACCCCTaGTCCACTCCAGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAISQDP*STPGGI
Trigger: GATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAAT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCATAGCCAACGCCTTTaGAGAATGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVHSQRL*RMGRFS
Trigger: GGAAAATCTGCCCATTCTTCAAAGGCGTTGGCTATG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR TCA 90 bp ACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTATCCCGCTGCTCTCGTaGAGGTGCAGGACACCACGC +
Preference number: 4 (lower is better)
Translates to: TICCAFSATLHTFSVFLSIPLLS*RCRTPR
Trigger: GCGTGGTGTCCTGCACCTTCACGAGAGCAGCGGGAT...AGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCGCTGGATGTCGTTGCTaGACCTGTCCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAAGCRC*TCPLHK
Trigger: TTTATGGAGTGGACAGGTTCAGCAACGACATCCAGC...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGGAACTGGCTCCCAGCTaGGCGGTAACTCCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKELAPS*AVTPFE
Trigger: CTCAAAAGGAGTTACCGCTCAGCTGGGAGCCAGTTC...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGCAGATGCACAGAAGGTaGACAAAAACTACAGTCACG +
Preference number: 4 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGQMHRR*TKTTVT
Trigger: CGTGACTGTAGTTTTTGTTCACCTTCTGTGCATCTG...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGAAGCCCATCCTCTCTCTaGTTTGGTGGACTAAGAACT +
Preference number: 4 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGSPSSL*FGGLRT
Trigger: AGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCT...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCTCATAAAACTCGGCTaGCGGCGTGAACTTGTACTT +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVLIKLG*RRELVL
Trigger: AAGTACAAGTTCACGCCGGCAGCCGAGTTTTATGAG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTTTCCACCCTTGGTTATaGAGAACAGGGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGFHPWL*RTGREG
Trigger: TCCTTCTCGCCCTGTTCTGCATAACCAAGGGTGGAA...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTCCAGAGGGCACCAAGTaGAAGTTTGTATCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGPEGTK*KFVSEV
Trigger: TACTTCTGATACAAACTTGCACTTGGTGCCCTCTGG...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGG +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAKHGCG*REELYR
Trigger: CCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTT...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGAGATTTTCCAAACGGTaGCAGCCCCCTCCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKRFSKR*QPPPGC
Trigger: ACAACCGGGAGGGGGCTGCCACCGTTTGGAAAATCT...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAATTGGAGTACTTGGTGTaGTTGCCAAGCACGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHELEYLV*LPSTEP
Trigger: TGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAA...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp ACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTGGCAGCGTGACGCCATaGACCAGGAGCACGAACAGC +
Preference number: 4 (lower is better)
Translates to: TICCAFSATLHTFSVFLSGSVTP*TRSTNS
Trigger: GCTGTTCGTGCTCCTGGTCCATGGCGTCACGCTGCC...AGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAACATCAATCCATACCGTaGCCTCTTTCAAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQHQSIP*PLSSGR
Trigger: TCTACCGCTTGAAAGAGGCCACGGTATGGATTGATG...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCGTAAATTCCACCCTTaGTTATGCAGAACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQERKFHP*LCRTGR
Trigger: TCGCCCTGTTCTGCATAACCAAGGGTGGAATTTACG...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCGGACAGCAAAAAGGATaGAGGTGCCCGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLGQQKG*RCPQQR
Trigger: CCTTTGCTGCGGGCACCTCCATCCTTTTTGCTGTCC...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCAACCCCATCATCTGCTaGATGTCGTTGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSNPIIC*MSLLNL
Trigger: CAGGTTCAGCAACGACATCCAGCAGATGATGGGGTT...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCAGCCAGTGTTGCAACTaGAACTGTCTGATGTCCCTC +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPASQCCN*NCLMSL
Trigger: GAGGGACATCAGACAGTTCCAGTTGCAACACTGGCT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSTWTLA*GFLLLL
Trigger: GAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGT...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYRMPVT*TLAWGF
Trigger: GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRLSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAACTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQLSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCTGACCACCAAAAGCTaGAGGAATGTTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQELTTKS*RNVPEH
Trigger: GTGTTCTGGAACATTCCTCCAGCTTTTGGTGGTCAG...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PPLERVFLGCLSHPALQGRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAATTTCTCAAGACCCCTaGTCCACTCCAGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEISQDP*STPGGI
Trigger: GATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAAT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGCCACACCACCTTTCCTaGTGTCTTCACCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKPHHLS*CLHPFP
Trigger: TGGAAAGGGGTGAAGACATCAGGAAAGGTGGTGTGG...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAACCACATCCTCAATGTTaGCCTTGTGTTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEPHPQC*PCVHGP
Trigger: TGGCCCATGAACACAAGGTCAACATTGAGGATGTGG...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCAAGTATAGACCCGGCCTaGACCCCATCATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTLARLENRSYSRNWLPSIDPA*TPSSAG
Trigger: TCCAGCAGATGATGGGGTTCAGGCCGGGTCTATACT...TGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATGCAACTGGAACTGTCTaGTGTCCCTCTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYATGTV*CPSEPP
Trigger: TGGTGGCTCAGAGGGACATCAGACAGTTCCAGTTGC...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCCTCCACCAGCTTGTCTaGTGCAGGTACCTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLLHQLV*CRYLLE
Trigger: TTCTAGGAGGTACCTGCATCAGACAAGCTGGTGGAG...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCCTCCACCAGCTTGTCTaGTGCAGGTACCTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCALHQLV*CRYLLE
Trigger: TTCTAGGAGGTACCTGCATCAGACAAGCTGGTGGAG...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATCGCCAGAAGCATGGATaGGGCTGGCGAGAGGAACTT +
Preference number: 4 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHRQKHG*GWREEL
Trigger: AAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCG...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR GCA 90 bp ATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGCGCCAGAAGCATGGATaGGGCTGGCGAGAGGAACTT +
Preference number: 4 (lower is better)
Translates to: ICCAFSATLHTFSVFLSSRQKHG*GWREEL
Trigger: AAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCG...CGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGTTGGCCAGGTCCACTaGGAAGCCGACTACGGACAG +
Preference number: 4 (lower is better)
Translates to: YMLCFFRHTTHLLCFSLFVGQVH*EADYGQ
Trigger: CTGTCCGTAGTCGGCTTCGCAGTGGACCTGGCCAAC...GAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTCAAAAAGGATGGAGGTaGCCGCAGCAAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLQKGWR*PQQRCP
Trigger: TGGACACCTTTGCTGCGGGCACCTCCATCCTTTTTG...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCCAAAAAGGATGGAGGTaGCCGCAGCAAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SDQKPILSLIWWTKNSCAQKGWR*PQQRCP
Trigger: TGGACACCTTTGCTGCGGGCACCTCCATCCTTTTTG...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTAC +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQVPPRT*SLWFIY
Trigger: GTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTAC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAGAGGCTGTGCAGGTGTaGAAGAACAATAAATTAACA +
Preference number: 4 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLEAVQV*KNNKLT
Trigger: TGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCAGAGTATTTCTGGGCTaGTTGTCTCACCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLRVFLG*LSHPAL
Trigger: GAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCCGCCGAGGCTCTGCTTaGATAAAGGGAAAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSRRGSA*IKGKEV
Trigger: CACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCG...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCGTAAATTCCACCCTTaGTTATGCAGAACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGRKFHP*LCRTGR
Trigger: TCGCCCTGTTCTGCATAACCAAGGGTGGAATTTACG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCTCTCTGATTTGGTaGACTAAGAACTCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPALSLIW*TKNSCA
Trigger: GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAG...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTCTGACCACCAAAAGCTaGAGGAATGTTCCAGAACAC +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGLTTKS*RNVPEH
Trigger: GTGTTCTGGAACATTCCTCCAGCTTTTGGTGGTCAG...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGAGAACCTGCTCACTGTaGTTCATTTACCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRRTCSL*FIYPLP
Trigger: AGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCT...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAACATAGCCAACGCCTTTaGAGAATGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEHSQRL*RMGRFS
Trigger: GGAAAATCTGCCCATTCTTCAAAGGCGTTGGCTATG...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR TCA 90 bp TATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCCCAGCGCCAGGAGCATaGCGAAAAACACAACAGCCC +
Preference number: 4 (lower is better)
Translates to: YMLCFFRHTTHLLCFSLFPAPGA*RKTQQP
Trigger: GGGCTGTTGTGTTTTTCGTCATGCTCCTGGCGCTGG...GAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp CTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTGGAGGAAGGCAGGACTaGCGAACTTCCAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LYAVLFPPHYTPSLFFSLGGRQD*RTSSTV
Trigger: GACTGTGCTGGAAGTTCGTCAGTCCTGCCTTCCTCC...AAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCGTTGTAACTGGCAAATaGAATCAATACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LTEQEQHEASVDVACHVAVVTGK*NQYSKS
Trigger: GGATTTGGAGTATTGATTGCATTTGCCAGTTACAAC...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGTTCCACCCTTGGTTATaGAGAACAGGGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKFHPWL*RTGREG
Trigger: TCCTTCTCGCCCTGTTCTGCATAACCAAGGGTGGAA...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAATCCGCTGGAAAAATTTaGAAACAGAGGTTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHESAGKI*KQRLGH
Trigger: GTGCCCCAACCTCTGTTTCCAAATTTTTCCAGCGGA...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCGGCGCCAGCAGGCACTaGACGCCGTTGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFGASRH*TPLRSF
Trigger: GAAGGAGCGCAACGGCGTCCAGTGCCTGCTGGCGCC...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CCA 90 bp AGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCATTGGAGTACTTGGTGTaGTTGCCAAGCACGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLTLARLENRSYSRNWLPLEYLV*LPSTEP
Trigger: TGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAA...TGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp ACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TICCAFSATLHTFSVFLSCRFRT*KSSARP
Trigger: GGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACA...AGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTAACCCCATCATCTGCTaGATGTCGTTGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLNPIIC*MSLLNL
Trigger: CAGGTTCAGCAACGACATCCAGCAGATGATGGGGTT...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGATCCTCTCTCTGATTTaGTGGACTAAGAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVILSLI*WTKNSC
Trigger: ACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGAT...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAATTGAGAGAGTATTTCTaGGCTGCTTGTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHELREYF*AACLTL
Trigger: CAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAA...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
3UTR CAA 72 bp AACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTaGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: NCSIHSQNSPLH*REYFWAACLTL
Trigger: CAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTCATAGCCAACGCCTTTaGAGAATGGGCAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLHSQRL*RMGRFS
Trigger: GGAAAATCTGCCCATTCTTCAAAGGCGTTGGCTATG...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATATTCTCCCCTCCACTTaGGAGAGTATTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYILPST*ESISGL
Trigger: CAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAAT...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCGCCTCACTTGGTCCCTaGCCCCGTTTCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFASLGP*PRFPRQ
Trigger: CTGCCTGGGGAAACGGGGGCAGGGACCAAGTGAGGC...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGGAGGCTGTGCAGGTGTaGAAGAACAATAAATTAACA +
Preference number: 4 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMREAVQV*KNNKLT
Trigger: TGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATAGAGTATTTCTGGGCTaGTTGTCTCACCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHRVFLG*LSHPAL
Trigger: GAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCT...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGTTCTTGACGTGCGAATaGAGCGGCTTCTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVFLTCE*SGFFIF
Trigger: AAAAATAAAGAAGCCGCTGCATTCGCACGTCAAGAA...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS-3UTR CCA 90 bp CTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGG +
Preference number: 4 (lower is better)
Translates to: LYAVLFPPHYTPSLFFSLKHGCG*REELYR
Trigger: CCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTT...AAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp CTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTGGACAGCAAAAAGGATaGAGGTGCCCGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LYAVLFPPHYTPSLFFSLGQQKG*RCPQQR
Trigger: CCTTTGCTGCGGGCACCTCCATCCTTTTTGCTGTCC...AAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTGGGCACCAGGACCATaGAGGACAGGGCGATGCCCC +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFWAPGP*RTGRCP
Trigger: GGGGCATCGCCCTGTCCTCCATGGTCCTGGTGCCCA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS-3UTR CCA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCATCCTCTCTCTGATTTaGTGGACTAAGAACTCCTGT +
Preference number: 4 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAILSLI*WTKNSC
Trigger: ACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGAT...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGTTGTAACTGGCAAATaGAATCAATACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQVVTGK*NQYSKS
Trigger: GGATTTGGAGTATTGATTGCATTTGCCAGTTACAAC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCGTTGTAACTGGCAAATaGAATCAATACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: SPGHPASQLQTQVCKTICVVTGK*NQYSKS
Trigger: GGATTTGGAGTATTGATTGCATTTGCCAGTTACAAC...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAGTGCATGAGAGTTTTTaGAGCCAACTCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEVHESF*SQLSIS
Trigger: AGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCAC...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCCCAGAGGGCACCAAGTaGAAGTTTGTATCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSPEGTK*KFVSEV
Trigger: TACTTCTGATACAAACTTGCACTTGGTGCCCTCTGG...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTCCGCGCCAGAAGCATaGATGCGGCTGGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFSAPEA*MRLARG
Trigger: TCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR TCA 90 bp TGGGCTTCTTTACTAGGAAATGATTTCTTTGGTAAGAATGCTTCAGTCTCACATAAGGCAGCGTGGCTGTaGTCCACACCACCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: WASLLGNDFFGKNASVSHKAAWL*STPPFL
Trigger: CAGGAAAGGTGGTGTGGATCACAGCCACGCTGCCTT...ATGTGAGACTGAAGCATTCTTACCAAAGAAATCATTTCCTAGTAAAGAAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp ACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTGCTGGATGTCGTTGCTaGACCTGTCCACTCCATAAA +
Preference number: 4 (lower is better)
Translates to: TICCAFSATLHTFSVFLSAGCRC*TCPLHK
Trigger: TTTATGGAGTGGACAGGTTCAGCAACGACATCCAGC...AGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGTTGTAACTGGCAAATaGAATCAATACTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGVVTGK*NQYSKS
Trigger: GGATTTGGAGTATTGATTGCATTTGCCAGTTACAAC...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TTCAGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCGTAAATTCCACCCTTaGTTATGCAGAACAGGGCGA +
Preference number: 4 (lower is better)
Translates to: FSLTLARLENRSYSRNWLRKFHP*LCRTGR
Trigger: TCGCCCTGTTCTGCATAACCAAGGGTGGAATTTACG...GAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TTCAGTCTCACATTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCGTCGTCGTAGGTGAGTaGCTTGAAGTTGATGATGCT +
Preference number: 4 (lower is better)
Translates to: FSLTLARLENRSYSRNWLVVVGE*LEVDDA
Trigger: AGCATCATCAACTTCAAGCCACTCACCTACGACGAC...GAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAATGTGAGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp TGGGCTTCTTTACTAGGAAATGATTTCTTTGGTAAGAATGCTTCAGTCTCACATACTCGGCTGCCGGCGTaGACTTGTACTTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: WASLLGNDFFGKNASVSHTRLPA*TCTWST
Trigger: AGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGT...ATGTGAGACTGAAGCATTCTTACCAAAGAAATCATTTCCTAGTAAAGAAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCAACCTAGAAATTCTCTaGAACCACCAAACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLNLEIL*NHQTVP
Trigger: TGGAACAGTTTGGTGGTTTCAGAGAATTTCTAGGTT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp AACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCCTCATAAAACTCGGCTaGCGGCGTGAACTTGTACTT +
Preference number: 4 (lower is better)
Translates to: NYMLCFFRHTTHLLCFSLLIKLG*RRELVL
Trigger: AAGTACAAGTTCACGCCGGCAGCCGAGTTTTATGAG...GAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATGTACCTCCTAGAACCTaGTCACTGTGGTTCATTTAC +
Preference number: 4 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHVPPRT*SLWFIY
Trigger: GTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTAC...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTCAGTAGATGTGGCTTaGCACGTGGCCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFSVDVA*HVASTS
Trigger: GCTGGTGGAGGCCACGTGGCAAGCCACATCTACTGA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp CTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCATCAATCCATACCGTaGCCTCTTTCAAGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: LYAVLFPPHYTPSLFFSLHQSIP*PLSSGR
Trigger: TCTACCGCTTGAAAGAGGCCACGGTATGGATTGATG...AAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp AACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCGTTCAGCAGGATATCTaGCAAGAGTTGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: NYMLCFFRHTTHLLCFSLVQQDI*QELVAL
Trigger: GAGAGCTACCAACTCTTGCCAGATATCCTGCTGAAC...GAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR TCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCAGAGCAAGAGCAGCATaGGGCCTCAGTAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFRARAA*GLSRCG
Trigger: GCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCT...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TGGGCTTCTTTACTAGGAAATGATTTCTTTGGTAAGAATGCTTCAGTCTCACATTGTCATGAATCCCGCTaGTCTCGTGAAGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WASLLGNDFFGKNASVSHCHESR*SREGAG
Trigger: TCCTGCACCTTCACGAGAGCAGCGGGATTCATGACA...ATGTGAGACTGAAGCATTCTTACCAAAGAAATCATTTCCTAGTAAAGAAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCGCAGGTCTCAGGAAGTaGAGATGGGTTTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFAGLRK*RWVSGL
Trigger: GAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGC...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATGAGGCTGTGCAGGTGTaGAAGAACAATAAATTAACA +
Preference number: 4 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYEAVQV*KNNKLT
Trigger: TGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCCCACATCCTCAATGTTaGCCTTGTGTTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFPHPQC*PCVHGP
Trigger: TGGCCCATGAACACAAGGTCAACATTGAGGATGTGG...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCATTCTCCCCTCCACTTaGGAGAGTATTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFILPST*ESISGL
Trigger: CAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAAT...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTTCCACCCTTGGTTATaGAGAACAGGGCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFFHPWL*RTGREG
Trigger: TCCTTCTCGCCCTGTTCTGCATAACCAAGGGTGGAA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR GCA 90 bp TATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGTCTGTAAAACTATATaGTGTGCTTTTTCCGCCACA +
Preference number: 4 (lower is better)
Translates to: YMLCFFRHTTHLLCFSLFVCKTI*CAFSAT
Trigger: TGTGGCGGAAAAAGCACAGCATATAGTTTTACAGAC...GAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTGTACTTGGAGTACTTaGTGTGGTTGCCAAGCACGG +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFCTWST*CGCQAR
Trigger: CCGTGCTTGGCAACCACACCAAGTACTCCAAGTACA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCAACCCCATCATCTGCTaGATGTCGTTGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFNPIIC*MSLLNL
Trigger: CAGGTTCAGCAACGACATCCAGCAGATGATGGGGTT...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR TCA 90 bp TGGGCTTCTTTACTAGGAAATGATTTCTTTGGTAAGAATGCTTCAGTCTCACATAGCGGTAACTCCTTTTaGGAATTAAGGCAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WASLLGNDFFGKNASVSHSGNSF*ELRQLQ
Trigger: CTGAAGCTGCCTTAATTCTCAAAAGGAGTTACCGCT...ATGTGAGACTGAAGCATTCTTACCAAAGAAATCATTTCCTAGTAAAGAAGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR GCA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCGTGCATGAGAGTTTTTaGAGCCAACTCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFVHESF*SQLSIS
Trigger: AGAAATGGAGAGTTGGCTGCAAAAACTCTCATGCAC...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS GCA 90 bp CGAGGCTGTGTCCGGCGGCGAGGGGATCCCTGGTGCCTTGCGCCCTaGCGGCCCCCGACCGGCGGCGCCTTGGCAGGCTCTAGGGCGCGG +
Preference number: 5 (lower is better)
Translates to: RGCVRRRGDPWCLAP*RPPTGGALAGSRAR
Trigger: CCGCGCCCTAGAGCCTGCCAAGGCGCCGCCGGTCGGGGGCCGGCAGGGCGCAAGGCACCAGGGATCCCCTCGCCGCCGGACACAGCCTCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568529.6
ENST00000568943.6
CDS GCA 90 bp GCTGCGCGTCGCCGTCGCGGGGCGCCAGCAGGCACTGGACGCCGTTaGGCTCCTTCACCACCAGCAGCTCCGCAGTTTTGCGCGCCCGAA +
Preference number: 5 (lower is better)
Translates to: AARRRRGAPAGTGRR*APSPPAAPQFCAPE
Trigger: TTCGGGCGCGCAAAACTGCGGAGCTGCTGGTGGTGAAGGAGCGCAACGGCGTCCAGTGCCTGCTGGCGCCCCGCGACGGCGACGCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp GGCTGCTCTGGACCCGTGTCCGCCCCGTTGTTCTCGGGCTGCACCTaGGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTGGCGAGAGG +
Preference number: 5 (lower is better)
Translates to: GCSGPVSAPLFSGCT*GFIRARSMDAAGER
Trigger: CCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGGTCCAGAGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp CGAAGGGGCTGCTCTGGACCCGTGTCCGCCCCGTTGTTCTCGGGCTaGACCTGCGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RRGCSGPVSAPLFSG*TCGFIRARSMDAAG
Trigger: GCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGGTCCAGAGCAGCCCCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 90 bp CCAAGACCACCCGGGAGCGCCTTAGACACTGGGATGAGCGCGCGCTaGGCGGACGCAGGGTTCCCAGAAAAGGGCGCGCGTCCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PRPPGSALDTGMSAR*ADAGFPEKGARPLE
Trigger: TTCCAGCGGACGCGCGCCCTTTTCTGGGAACCCTGCGTCCGCTCAGCGCGCGCTCATCCCAGTGTCTAAGGCGCTCCCGGGTGGTCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CCA 90 bp GGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: GLHLRVHPRQKHGCG*REELYRSWGHAEAL
Trigger: CAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000561820.5
CDS CCA 90 bp GGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLHLRVHPRQKHGCG*REELYRSWGHAEAV
Trigger: CACAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414754.7
ENST00000568529.6
ENST00000568943.6
CDS CCA 90 bp GGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: GLHLRVHPRQKHGCG*REELYRSWGHAEAR
Trigger: TCGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp GTTCTCGGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATGGATaGGGCTGGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAG +
Preference number: 5 (lower is better)
Translates to: VLGLHLRVHPRQKHG*GWREELYRSWGHAE
Trigger: CTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp CGTTGTTCTCGGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATaGATGCGGCTGGCGAGAGGAACTTTACCGGTCCTGGGGGCACGC +
Preference number: 5 (lower is better)
Translates to: RCSRAAPAGSSAPEA*MRLARGTLPVLGAR
Trigger: GCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAGGGATCCCTGGTGCCTaGCGCCCTGCCGGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLGIPGA*RPAGPR
Trigger: TCGGGGGCCGGCAGGGCGCAAGGCACCAGGGATCCC...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS CCA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTCCAGGCAGGCTCAGATGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SEVGAQRMPVTWTLA*GFLLLLQAGSDGQP
Trigger: TGGCTGGCCATCTGAGCCTGCCTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTGCAGCCCCCTCCCGGTaGTACTGTCCCAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVAAPSR*YCPRAS
Trigger: GCTGGCTCTGGGACAGTACAACCGGGAGGGGGCTGC...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CAA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCCTCCATGCCTCCCATaGAGCTGTCAAGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFPPCLP*SCQGPA
Trigger: CGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAGG...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTCCTGTCAGGCTCCCTTaGGGCACCCACCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: GSAADACDLDIGMGVPPSPVRLP*GTHLAL
Trigger: CAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGG...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS CCA 90 bp CCCTGCAGCACTTTTCCTCGTTCACCCACTCTCGCCTGCCCCAAATaGCTGGGATTGAACTCACCGAGGCTGAGGGCAGCGTGCCGACCC +
Preference number: 5 (lower is better)
Translates to: PCSTFPRSPTLACPK*LGLNSPRLRAACRP
Trigger: GGGTCGGCACGCTGCCCTCAGCCTCGGTGAGTTCAATCCCAGCCATTTGGGGCAGGCGAGAGTGGGTGAACGAGGAAAAGTGCTGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CCA 90 bp TCCCTACTTGCAACTCCCAAGACCACCCGGGAGCGCCTTAGACACTaGGATGAGCGCGCGCTGAGCGGACGCAGGGTTCCCAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SLLATPKTTRERLRH*DERALSGRRVPRKG
Trigger: CCCTTTTCTGGGAACCCTGCGTCCGCTCAGCGCGCGCTCATCCCAGTGTCTAAGGCGCTCCCGGGTGGTCTTGGGAGTTGCAAGTAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CCA 90 bp CCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTaGACATTGGCATGGGGGTTCCTCCTTCTCCTCCAGGCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: PKMVSEVGAQRMPVT*TLAWGFLLLLQAGS
Trigger: TGAGCCTGCCTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp GCTGGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTaGTTGGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: AGERNFTGPGGTPRL*LDKGKRGGYPAVPP
Trigger: GGGAGGAACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS-3UTR CAA 90 bp GGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCCTCCTTCTTTGGGGTCGGTACAGTaGGGGCTGTTCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GSAADACDLDIGMGVPPSLGSVQ*GLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAA...AGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGAGCCATTGAGGAGCTaGGGGTCGGTACAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLEPLRS*GSVQLG
Trigger: CCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTC...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGCTCAGTAGATGTGGCTaGCCACGTGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLLSRCG*PRGLHQ
Trigger: CTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAG...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TCCCAAGATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTCCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTA +
Preference number: 5 (lower is better)
Translates to: SQDGVRGGSAADACDLDIPSTEP*RSLGSV
Trigger: TACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGG...AATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCATCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTGTGGCCTCCACCAGCTaGTCTGATGCAGGTACCTCC +
Preference number: 5 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVVASTS*SDAGTS
Trigger: GGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCAC...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCCACATGAGGCCTCACTaGGTCCCTGCCCCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPHMRPH*VPAPVS
Trigger: GGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTG...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTACCTGTCAGGCTCCCTTaGGGCACCCACCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLPVRLP*GTHLAL
Trigger: CAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGG...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS CCA 90 bp GCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTGCTTaGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTTCCTCCCTACT +
Preference number: 5 (lower is better)
Translates to: ARGTLPVLGARRGSA*IKGKEVVTRPFLPT
Trigger: AGTAGGGAGGAACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS-3UTR CAA 90 bp TCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATGGGGGTTCATTTGGAAACAGAGGTaGGGGCACGCCGGAACTCAA +
Preference number: 5 (lower is better)
Translates to: SEVGAQRMPVTWTLAWGFIWKQR*GHAGTQ
Trigger: TTGAGTTCCGGCGTGCCCCAACCTCTGTTTCCAAAT...GAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CAA 90 bp TGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGATCCCCGCCGTTCCTCCCTACTaGCAACTCCCAAGACCACCC +
Preference number: 5 (lower is better)
Translates to: CSQLSISQDPWSTPGGIPAVPPY*QLPRPP
Trigger: GGGTGGTCTTGGGAGTTGCAAGTAGGGAGGAACGGC...GGGGATCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CAA 90 bp GAGGACAGCACGGTGAAGACACACATGAGGCCTCACTTGGTCCCTGCCCCCGTTCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: EDSTVKTHMRPHLVPAPVPVTWT*AWGFLL
Trigger: AAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGG...AACGGGGGCAGGGACCAAGTGAGGCCTCATGTGTGTCTTCACCGTGCTGTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS GCA 90 bp AGAGCAAGAGCTGCCACTGGGGCAGGCCGATGTCATGAATCCCGCTaGTCTCGTGAAGGTGCAGGACACCACGCTCATAAAACTCGGCTG +
Preference number: 5 (lower is better)
Translates to: RARAATGAGRCHESR*SREGAGHHAHKTRL
Trigger: CAGCCGAGTTTTATGAGCGTGGTGTCCTGCACCTTCACGAGAGCAGCGGGATTCATGACATCGGCCTGCCCCAGTGGCAGCTCTTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp GAACTGTCTGATGTCCCTCTGAGCCACCAGGTGGTGCTCGTTCTCTaGCGTGATGCCATAGGCCAGTCTCTCCCAAAGAGAGCCCTGCGT +
Preference number: 5 (lower is better)
Translates to: ELSDVPLSHQVVLVL*RDAIGQSLPKRALR
Trigger: ACGCAGGGCTCTCTTTGGGAGAGACTGGCCTATGGCATCACGCCAGAGAACGAGCACCACCTGGTGGCTCAGAGGGACATCAGACAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000566163.5
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp GAACTGTCTGATGTCCCTCTGAGCCACCAGGTGGTGCTCGTTCTCTaGCGTGATGCCATAGGCCAGTCTCAGGAGGAAGGCAGGACTGAC +
Preference number: 5 (lower is better)
Translates to: ELSDVPLSHQVVLVL*RDAIGQSQEEGRTD
Trigger: GTCAGTCCTGCCTTCCTCCTGAGACTGGCCTATGGCATCACGCCAGAGAACGAGCACCACCTGGTGGCTCAGAGGGACATCAGACAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS-3UTR CAA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTAGCAGCTCCGCAGTTTaGCGCGCCCGAAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGSSSAV*RARRGC
Trigger: GCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGCT...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CAA 90 bp AGGTACCTCCTAGAACCTGCTCACTGTGGTTCATTTACCCTCTTCCTCCTGTCCGCAGCCCCCTCCCGGTaGTACTGTCCCAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RYLLEPAHCGSFTLFLLSAAPSR*YCPRAS
Trigger: GCTGGCTCTGGGACAGTACAACCGGGAGGGGGCTGC...GGACAGGAGGAAGAGGGTAAATGAACCACAGTGAGCAGGTTCTAGGAGGTACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CAA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGGCCACATCCTCAATGTaGACCTTGTGTTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVATSSM*TLCSWA
Trigger: GGCCCATGAACACAAGGTCAACATTGAGGATGTGGC...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGATCTGCTGGATGTCGTaGCTGAACCTGTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: PRFPRQVSGSADGFLGSVICWMS*LNLSTP
Trigger: TGGAGTGGACAGGTTCAGCAACGACATCCAGCAGAT...CACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS CCA 90 bp AAGGTGACGCCAAATGTGAAGAGTTTCCGGTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCCGTGATGACAGCCTCCATGCCTCCC +
Preference number: 5 (lower is better)
Translates to: KVTPNVKSFRCRFRT*KSSARPVMTASMPP
Trigger: GGGAGGCATGGAGGCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACACCGGAAACTCTTCACATTTGGCGTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp CCAGATTCAGGAGCCAACTTCCGCCGCAAGGCAGCACCACTGCGTTaGTTTGGTGTTGGTTCAGCTAGCACCACATCTCCGATTCACCCC +
Preference number: 5 (lower is better)
Translates to: PDSGANFRRKAAPLR*FGVGSASTTSPIHP
Trigger: GGGGTGAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTCCTGAATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp GCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCTGTGCTTAGCAGCTCCGCAGTTTaGCGCGCCCGAAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: ATQLVSCRPKSVKLYAVLSSSAV*RARRGC
Trigger: GCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGCT...AAGCACAGCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GGTCCCTGCCCCCGTTTCCCCAGGCAGGTCTCAGGAAGTGCAGATGGGTTTCTGTTGTACTTGGAGTACTaGGTGTGGTTGCCAAGCACG +
Preference number: 5 (lower is better)
Translates to: GPCPRFPRQVSGSADGFLLYLEY*VWLPST
Trigger: CGTGCTTGGCAACCACACCAAGTACTCCAAGTACAA...CAGAAACCCATCTGCACTTCCTGAGACCTGCCTGGGGAAACGGGGGCAGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGCACATGAGGCCTCACTaGGTCCCTGCCCCCGTTTCC +
Preference number: 5 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVHMRPH*VPAPVS
Trigger: GGAAACGGGGGCAGGGACCAAGTGAGGCCTCATGTG...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS TCA 90 bp ACTTGTACTTGGAGTACTTGGTGTGGTTGCCAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTACAGTTGGGGCTGTTCCAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: TCTWSTWCGCQARSH*GAWGRYSWGCSRCG
Trigger: GCCACACCTGGAACAGCCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAAGTACAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 90 bp CGTGAAGGTGCAGGACACCACGCTCATAAAACTCGGCTGCCGGCGTaGACTTGTACTTGGAGTACTTGGTGTGGTTGCCAAGCACGGAGC +
Preference number: 5 (lower is better)
Translates to: REGAGHHAHKTRLPA*TCTWSTWCGCQARS
Trigger: GCTCCGTGCTTGGCAACCACACCAAGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGTTTTATGAGCGTGGTGTCCTGCACCTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp CCATCCCAGATTCAGGAGCCAACTTCCGCCGCAAGGCAGCACCACTaGGTTGGTTTGGTGTTGGTTCAGCTAGCACCACATCTCCGATTC +
Preference number: 5 (lower is better)
Translates to: PSQIQEPTSAARQHH*VGLVLVQLAPHLRF
Trigger: GAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTCCTGAATCTGGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp CCAGAAAAGGGCGCGCGTCCGCTGGAAAAATTTGGAAACAGAGGTTaGGGCACGCCGGAACTCAAGAGTTGGAGACTTCTGACAGCCCTC +
Preference number: 5 (lower is better)
Translates to: PEKGARPLEKFGNRG*GTPELKSWRLLTAL
Trigger: GAGGGCTGTCAGAAGTCTCCAACTCTTGAGTTCCGGCGTGCCCCAACCTCTGTTTCCAAATTTTTCCAGCGGACGCGCGCCCTTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS-3UTR CAA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCCCGTGTCCGCCCCGTaGTTCTCGGGCTGCACCTGC +
Preference number: 5 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYPVSAP*FSGCTC
Trigger: GCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CAA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCAGCAGCTCCGCAGTTTaGCGCGCCCGAAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: SDQKPILSLIWWTKNSCASSSAV*RARRGC
Trigger: GCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGCT...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000414754.7
CDS-3UTR CAA 90 bp TTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGTTGGGGTCGGTACAGTaGGGGCTGTTCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: FWAPCLTEQEQHEASVDVLGSVQ*GLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAA...CACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGAGCCATTGAGGAGCTaGGGGTCGGTACAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQEPLRS*GSVQLG
Trigger: CCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp AGGTCTCAGGAAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGGAGCCATTGAGGAGCTaGGGGTCGGTACAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: RSQEVQMGFWAPCLTEQEEPLRS*GSVQLG
Trigger: CCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTC...CTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTTCCTGAGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAACCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTA +
Preference number: 5 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQPSTEP*RSLGSV
Trigger: TACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGG...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp AAATTCTCCCCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCCTCCATGCCTCCCATaGAGCTGTCAAGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: KFSPPLERVFLGCLSHPAPPCLP*SCQGPA
Trigger: CGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAGG...GGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS CCA 90 bp GGTTCAGCTAGCACCACATCTCCGATTCACCCCGGGACAAATGTCTaGAGGCAGAAGGGGCCACATGCAGATGGCAAAGAGGAAATGGCA +
Preference number: 5 (lower is better)
Translates to: GSASTTSPIHPGTNV*RQKGPHADGKEEMA
Trigger: TGCCATTTCCTCTTTGCCATCTGCATGTGGCCCCTTCTGCCTCCAGACATTTGTCCCGGGGTGAATCGGAGATGTGGTGCTAGCTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp TTAGCGAGGCTAGAAAACAGATCATATAGCAGGAACTGGCTCCCAGCTGAGCGGCCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTA +
Preference number: 5 (lower is better)
Translates to: LARLENRSYSRNWLPAERPSTEP*RSLGSV
Trigger: TACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGG...CCGCTCAGCTGGGAGCCAGTTCCTGCTATATGATCTGTTTTCTAGCCTCGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GATCAGAAAGGACAACTTCCAGGGGAGGAATCCCAAGATGGTGTCCGAGGTGGGGAGTACTTGGTGTGGTaGCCAAGCACGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: DQKGQLPGEESQDGVRGGEYLVW*PSTEPL
Trigger: CAATGGCTCCGTGCTTGGCAACCACACCAAGTACTC...CCCACCTCGGACACCATCTTGGGATTCCTCCCCTGGAAGTTGTCCTTTCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGAGTACTTGGTGTGGTaGCCAAGCACGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: PPLERVFLGCLSHPALQGEYLVW*PSTEPL
Trigger: CAATGGCTCCGTGCTTGGCAACCACACCAAGTACTC...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCGCCACATCCTCAATGTaGACCTTGTGTTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: LTEQEQHEASVDVACHVAATSSM*TLCSWA
Trigger: GGCCCATGAACACAAGGTCAACATTGAGGATGTGGC...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CTGTCTAGGGTGGGCAAGAGGAGGGTCTATGTACCTTCCCCAACCACCCCACTAATCTGCTGGATGTCGTaGCTGAACCTGTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: LSRVGKRRVYVPSPTTPLICWMS*LNLSTP
Trigger: TGGAGTGGACAGGTTCAGCAACGACATCCAGCAGAT...TAGTGGGGTGGTTGGGGAAGGTACATAGACCCTCCTCTTGCCCACCCTAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CTTACAGAGCAAGAGCAGCATGAGGCCTCAGTAGATGTGGCTTGCCACGTGGCCGATGGCCAGCCAGTGTaGCAACTGGAACTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: LTEQEQHEASVDVACHVADGQPV*QLELSD
Trigger: ATCAGACAGTTCCAGTTGCAACACTGGCTGGCCATC...GGCCACGTGGCAAGCCACATCTACTGAGGCCTCATGCTGCTCTTGCTCTGTAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCCCTGTCAGGCTCCCTTaGGGCACCCACCTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLPVRLP*GTHLAL
Trigger: CAAGGCCAGGTGGGTGCCCAAAGGGAGCCTGACAGG...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTACGCCGAGGCTCTGCTaGGATAAAGGGAAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: PPLERVFLGCLSHPALQGTPRLC*DKGKRG
Trigger: ACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGT...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379906.6
CDS-3UTR CAA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAACCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTA +
Preference number: 5 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEPSTEP*RSLGSV
Trigger: TACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGG...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGGAGTACTTGGTGTGGTaGCCAAGCACGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMREYLVW*PSTEPL
Trigger: CAATGGCTCCGTGCTTGGCAACCACACCAAGTACTC...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CCTCCACTTGAGAGAGTATTTCTGGGCTGCTTGTCTCACCCTGCCCTCCAAGGTGCCACATCCTCAATGTaGACCTTGTGTTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: PPLERVFLGCLSHPALQGATSSM*TLCSWA
Trigger: GGCCCATGAACACAAGGTCAACATTGAGGATGTGGC...ACCTTGGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTCCTCCATGCCTCCCATaGAGCTGTCAAGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLPPCLP*SCQGPA
Trigger: CGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAGG...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp AACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCGCAGCCCCCTCCCGGTaGTACTGTCCCAGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NYMLCFFRHTTHLLCFSLAAPSR*YCPRAS
Trigger: GCTGGCTCTGGGACAGTACAACCGGGAGGGGGCTGC...GAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp TCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCTGTGCCTTGGGGTCGGTACAGTaGGGGCTGTTCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: SDQKPILSLIWWTKNSCALGSVQ*GLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAA...GGCACAGGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGGAGCCATTGAGGAGCTaGGGGTCGGTACAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: FPPHYTPSLFFSLRWLSKEPLRS*GSVQLG
Trigger: CCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTC...CTTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGGGAAAGCTGGTGATACAGTaGATGCTGCTGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VFAANSPFLKTPGPLQVGKLVIQ*MLLVSR
Trigger: CCTGCTGACCAGCAGCATCAACTGTATCACCAGCTT...TCCCACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp AAGTGCAGATGGGTTTCTGGGCTCCGTGTCTTACAGAGCAAGAGCAGCATGAGGGATGGCCAGCCAGTGTaGCAACTGGAACTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: KCRWVSGLRVLQSKSSMRDGQPV*QLELSD
Trigger: ATCAGACAGTTCCAGTTGCAACACTGGCTGGCCATC...CCTCATGCTGCTCTTGCTCTGTAAGACACGGAGCCCAGAAACCCATCTGCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAAGATGGCCAGCCAGTGTaGCAACTGGAACTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQDGQPV*QLELSD
Trigger: ATCAGACAGTTCCAGTTGCAACACTGGCTGGCCATC...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCGTGGCCTCCACCAGCTaGTCTGATGCAGGTACCTCC +
Preference number: 5 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLVASTS*SDAGTS
Trigger: GGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCAC...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCCTCAGTAGATGTGGCTaGCCACGTGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLLSRCG*PRGLHQ
Trigger: CTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAG...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS GCA 90 bp GAGGCCAAACCACTCCTACCCCAGGGTCCTTGGCATGAATGTATTTaGATCTCCCAGTGCTGCTGTACAAGGCAGGCTTATGACTGTCAA +
Preference number: 5 (lower is better)
Translates to: EAKPLLPQGPWHECI*ISQCCCTRQAYDCQ
Trigger: TTGACAGTCATAAGCCTGCCTTGTACAGCAGCACTGGGAGATGCAAATACATTCATGCCAAGGACCCTGGGGTAGGAGTGGTTTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS-3UTR CAA 90 bp GACCTCATGAACCTAGCTTCAGCAGGATCCCAAAGTGGGAGAGACTTCCCCCAATTGTACTTGGAGTACTaGGTGTGGTTGCCAAGCACG +
Preference number: 5 (lower is better)
Translates to: DLMNLASAGSQSGRDFPQLYLEY*VWLPST
Trigger: CGTGCTTGGCAACCACACCAAGTACTCCAAGTACAA...TTGGGGGAAGTCTCTCCCACTTTGGGATCCTGCTGAAGCTAGGTTCATGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTAAGCTGGTGATACAGTaGATGCTGCTGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGKLVIQ*MLLVSR
Trigger: CCTGCTGACCAGCAGCATCAACTGTATCACCAGCTT...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATCCTCCATGCCTCCCATaGAGCTGTCAAGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHPPCLP*SCQGPA
Trigger: CGCTGGGCCTTGACAGCTCAATGGGAGGCATGGAGG...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSPVTWT*AWGFLL
Trigger: AAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGG...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp CCACCAAACTGTTCCATCCACTCTCAAAATTCTCCCCTCCACTTGAGAGAGTATCTCAGTAGATGTGGCTaGCCACGTGGCCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: PPNCSIHSQNSPLHLREYLSRCG*PRGLHQ
Trigger: CTGGTGGAGGCCACGTGGCAAGCCACATCTACTGAG...ATACTCTCTCAAGTGGAGGGGAGAATTTTGAGAGTGGATGGAACAGTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TCCCCAGGCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCAGCTCTCCTTCTCCCTaGTCTCGTTTTCATCTCCCA +
Preference number: 5 (lower is better)
Translates to: SPGHPASQLQTQVCKTICSSPSP*SRFHLP
Trigger: TGGGAGATGAAAACGAGACAAGGGAGAAGGAGAGCT...GCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GCCACCCAGCTAGTCAGCTGCAGACCCAAGTCTGTAAAACTATATGCTGTGCTTACGCCGAGGCTCTGCTaGGATAAAGGGAAAAGAGGT +
Preference number: 5 (lower is better)
Translates to: ATQLVSCRPKSVKLYAVLTPRLC*DKGKRG
Trigger: ACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGT...AAGCACAGCATATAGTTTTACAGACTTGGGTCTGCAGCTGACTAGCTGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp AACTCCTGTGCCCAAAGTCTAGGCAAATGTGGTGGGGATTTCCGACCTCATGAAATCTGCTGGATGTCGTaGCTGAACCTGTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: NSCAQSLGKCGGDFRPHEICWMS*LNLSTP
Trigger: TGGAGTGGACAGGTTCAGCAACGACATCCAGCAGAT...TTCATGAGGTCGGAAATCCCCACCACATTTGCCTAGACTTTGGGCACAGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp GAGAGTTTTTGCAGCCAACTCTCCATTTCTCAAGACCCCTGGTCCACTCCAGGTGTGAGTGGCTTGAAGTaGATGATGCTGACCACAACC +
Preference number: 5 (lower is better)
Translates to: ESFCSQLSISQDPWSTPGVSGLK*MMLTTT
Trigger: GGTTGTGGTCAGCATCATCAACTTCAAGCCACTCAC...ACCTGGAGTGGACCAGGGGTCTTGAGAAATGGAGAGTTGGCTGCAAAAACTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS CCA 90 bp AACAGCCCATTCTCTATTCTGGTAGAATCTTGCAAGCTGTCTTCCTaGACTTCCTACCATTGGCACCATTTCAGCACTTGGGCCCACCAC +
Preference number: 5 (lower is better)
Translates to: NSPFSILVESCKLSS*TSYHWHHFSTWAHH
Trigger: GTGGTGGGCCCAAGTGCTGAAATGGTGCCAATGGTAGGAAGTCCAGGAAGACAGCTTGCAAGATTCTACCAGAATAGAGAATGGGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS-3UTR CAA 90 bp AACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTGGGGTCGGTACAGTaGGGGCTGTTCCAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: NYMLCFFRHTTHLLCFSLLGSVQ*GLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAA...GAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GGGGTATCTGATCAAAAGCCCATCCTCTCTCTGATTTGGTGGACTAAGAACTCCAAGCTGGTGATACAGTaGATGCTGCTGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GVSDQKPILSLIWWTKNSKLVIQ*MLLVSR
Trigger: CCTGCTGACCAGCAGCATCAACTGTATCACCAGCTT...GGAGTTCTTAGTCCACCAAATCAGAGAGAGGATGGGCTTTTGATCAGATACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS TCA 90 bp TTTATGGGAGGATATAAAGTCACTAATGGGGCCCAGACCCCGACCTaGTTGTTCTCCATTCTTAAGCCTCACTGTTCACAGGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: FMGGYKVTNGAQTPT*LFSILKPHCSQGSK
Trigger: CTTGGAGCCCTGTGAACAGTGAGGCTTAAGAATGGAGAACAATCAGGTCGGGGTCTGGGCCCCATTAGTGACTTTATATCCTCCCATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 90 bp CAGATGGCAAAGAGGAAATGGCAGGCTCTCTCGGAAGCACGACCCTaGTCTAATGCAAAAGGCTTTGCTGACTGTTTGCTCTCATTTCAA +
Preference number: 5 (lower is better)
Translates to: QMAKRKWQALSEARP*SNAKGFADCLLSFQ
Trigger: TTGAAATGAGAGCAAACAGTCAGCAAAGCCTTTTGCATTAGAGCAGGGTCGTGCTTCCGAGAGAGCCTGCCATTTCCTCTTTGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp GTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTTGTACTTGGAGTACTaGGTGTGGTTGCCAAGCACG +
Preference number: 5 (lower is better)
Translates to: VLFPPHYTPSLFFSLRWLLYLEY*VWLPST
Trigger: CGTGCTTGGCAACCACACCAAGTACTCCAAGTACAA...AAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp TTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAATCTGCTGGATGTCGTaGCTGAACCTGTCCACTCCA +
Preference number: 5 (lower is better)
Translates to: FSATLHTFSVFLSSVAFEICWMS*LNLSTP
Trigger: TGGAGTGGACAGGTTCAGCAACGACATCCAGCAGAT...TTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp ACTATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTGAGTACTTGGTGTGGTaGCCAAGCACGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: TICCAFSATLHTFSVFLSEYLVW*PSTEPL
Trigger: CAATGGCTCCGTGCTTGGCAACCACACCAAGTACTC...AGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp ATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGCCACATCCTCAATGTaGACCTTGTGTTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: ICCAFSATLHTFSVFLSSATSSM*TLCSWA
Trigger: GGCCCATGAACACAAGGTCAACATTGAGGATGTGGC...CGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp TTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGGTGGCTTTCGAAGTGAGTGGCTTGAAGTaGATGATGCTGACCACAACC +
Preference number: 5 (lower is better)
Translates to: FSATLHTFSVFLSSVAFEVSGLK*MMLTTT
Trigger: GGTTGTGGTCAGCATCATCAACTTCAAGCCACTCAC...TTCGAAAGCCACCGAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp GAGGCTGTGCAGGTGTGCAAGAACAATAAATTAACACAACAGCCTGTCAGGCTCAATTCTCCCCTCCACTaGAGAGAGTATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EAVQVCKNNKLTQQPVRLNSPLH*REYFWA
Trigger: AGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATT...GAGCCTGACAGGCTGTTGTGTTAATTTATTGTTCTTGCACACCTGCACAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS TCA 90 bp GATCATATAGCAGGAACTGGCTCCCAGCTGAGCGGTAACTCCTTTTaGGAATTAAGGCAGCTTCAGGGATTTCTGTTCAGCAGGATATCT +
Preference number: 5 (lower is better)
Translates to: DHIAGTGSQLSGNSF*ELRQLQGFLFSRIS
Trigger: AGATATCCTGCTGAACAGAAATCCCTGAAGCTGCCTTAATTCTCAAAAGGAGTTACCGCTCAGCTGGGAGCCAGTTCCTGCTATATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219833.13
ENST00000561820.5
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp TATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCAAGCTGGTGATACAGTaGATGCTGCTGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: YMLCFFRHTTHLLCFSLFKLVIQ*MLLVSR
Trigger: CCTGCTGACCAGCAGCATCAACTGTATCACCAGCTT...GAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp TCCCACAGTCAGAATAAGAATCCCTCCAACAAGGGTGTAAGAGACTCTAACCATGTGAGTGGCTTGAAGTaGATGATGCTGACCACAACC +
Preference number: 5 (lower is better)
Translates to: SHSQNKNPSNKGVRDSNHVSGLK*MMLTTT
Trigger: GGTTGTGGTCAGCATCATCAACTTCAAGCCACTCAC...ATGGTTAGAGTCTCTTACACCCTTGTTGGAGGGATTCTTATTCTGACTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379906.6
ENST00000567238.1
CDS TCA 90 bp CTCGTCAGGCACAAGGGAATGCCAGAAGTGCAGCTGCCTTCTGTTTaGTTCACTATAATAAAGCCCAACTCCAATTCTGGGTTGAAACAA +
Preference number: 5 (lower is better)
Translates to: LVRHKGMPEVQLPSV*FTIIKPNSNSGLKQ
Trigger: TTGTTTCAACCCAGAATTGGAGTTGGGCTTTATTATAGTGAATCAAACAGAAGGCAGCTGCACTTCTGGCATTCCCTTGTGCCTGACGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS GCA 90 bp CGGAAGCACGACCCTGCTCTAATGCAAAAGGCTTTGCTGACTGTTTaGTCTCATTTCAACCAAGTAGACTCAGCTTTTCACATCCAACTA +
Preference number: 5 (lower is better)
Translates to: RKHDPALMQKALLTV*SHFNQVDSAFHIQL
Trigger: TAGTTGGATGTGAAAAGCTGAGTCTACTTGGTTGAAATGAGAGCAAACAGTCAGCAAAGCCTTTTGCATTAGAGCAGGGTCGTGCTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 90 bp TTGAGAATTAAGGCAGCTTCAGGGATTTCTGTTCAGCAGGATATCTaGCAAGAGTTGGTAGCTCTCCTTCTCCCTTGTCTCGTTTTCATC +
Preference number: 5 (lower is better)
Translates to: LRIKAASGISVQQDI*QELVALLLPCLVFI
Trigger: GATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCCTGCTGAACAGAAATCCCTGAAGCTGCCTTAATTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219833.13
ENST00000561820.5
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp TATATGCTGTGCTTTTTCCGCCACACTACACACCTTCTCTGTTTTTCTCTCTTCGATATCTGGCAAGAGTaGGTAGCTCTCCTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: YMLCFFRHTTHLLCFSLFDIWQE*VALLLP
Trigger: AGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATC...GAAGAGAGAAAAACAGAGAAGGTGTGTAGTGTGGCGGAAAAAGCACAGCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS-3UTR CAA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCGTGGCCTCCACCAGCTaGTCTGATGCAGGTACCTCC +
Preference number: 5 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFVASTS*SDAGTS
Trigger: GGAGGTACCTGCATCAGACAAGCTGGTGGAGGCCAC...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS CCA 90 bp CAGCTAAATAATTTCCTCTCTGGAAACCAGCTAGAGGAAAATAAATaGCATTCTCTCGCCCCTTCCCATCCTCCAACACATTGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: QLNNFLSGNQLEENK*HSLAPSHPPTHCSF
Trigger: AAAAGAACAATGTGTTGGAGGATGGGAAGGGGCGAGAGAATGCCATTTATTTTCCTCTAGCTGGTTTCCAGAGAGGAAATTATTTAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS-3UTR CAA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCTTGTACTTGGAGTACTaGGTGTGGTTGCCAAGCACG +
Preference number: 5 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFLYLEY*VWLPST
Trigger: CGTGCTTGGCAACCACACCAAGTACTCCAAGTACAA...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS-3UTR CAA 90 bp TTAACTATGAATGTTTCTACTCAAAATCCCTCAAAGCATCTATCCACTGACTTCAATTCTCCCCTCCACTaGAGAGAGTATTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LTMNVSTQNPSKHLSTDFNSPLH*REYFWA
Trigger: AGCCCAGAAATACTCTCTCAAGTGGAGGGGAGAATT...GAAGTCAGTGGATAGATGCTTTGAGGGATTTTGAGTAGAAACATTCATAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
CDS GCA 72 bp GTCCGGCGGCGAGGGGATCCCTGGTGCCTTGCGCCCTaGCGGCCCCCGACCGGCGGCGCCTTGGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: VRRRGDPWCLAP*RPPTGGALAGS
Trigger: AGAGCCTGCCAAGGCGCCGCCGGTCGGGGGCCGGCAGGGCGCAAGGCACCAGGGATCCCCTCGCCGCCGGAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568529.6
ENST00000568943.6
CDS CAA 90 bp GGGCACGCCGAGGCTGTGTCCGGCGGCGAGGGGATCCCTGGTGCCTaGCGCCCTGCCGGCCCCCGACCGGCGGCGCCTTGGCAGGCTCTA +
Preference number: 6 (lower is better)
Translates to: GHAEAVSGGEGIPGA*RPAGPRPAAPWQAL
Trigger: TAGAGCCTGCCAAGGCGCCGCCGGTCGGGGGCCGGCAGGGCGCAAGGCACCAGGGATCCCCTCGCCGCCGGACACAGCCTCGGCGTGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000568529.6
ENST00000568943.6
CDS CAA 72 bp GCCCGAAGGGGCTGCTCTGGACCCGTGTCCGCCCCGTaGTTCTCGGGCTGCACCTGCGGGTTCATCCGCGCC +
Preference number: 6 (lower is better)
Translates to: ARRGCSGPVSAP*FSGCTCGFIRA
Trigger: GGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGGTCCAGAGCAGCCCCTTCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp CGCCGTCGCGGGGCGCCAGCAGGCACTGGACGCCGTTaGGCTCCTTCACCACCAGCAGCTCCGCAGTTTTGC +
Preference number: 6 (lower is better)
Translates to: RRRGAPAGTGRR*APSPPAAPQFC
Trigger: GCAAAACTGCGGAGCTGCTGGTGGTGAAGGAGCGCAACGGCGTCCAGTGCCTGCTGGCGCCCCGCGACGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp CATGGATGCGGCTGGCGAGAGGAACTTTACCGGTCCTaGGGGCACGCCGAGGCTGTGTCCGGCGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: HGCGWREELYRS*GHAEAVSGGEG
Trigger: CCCCTCGCCGCCGGACACAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414754.7
ENST00000568529.6
ENST00000568943.6
CDS TCA 72 bp CCCGGGAGCGCCTTAGACACTGGGATGAGCGCGCGCTaGGCGGACGCAGGGTTCCCAGAAAAGGGCGCGCGT +
Preference number: 6 (lower is better)
Translates to: PGSALDTGMSAR*ADAGFPEKGAR
Trigger: ACGCGCGCCCTTTTCTGGGAACCCTGCGTCCGCTCAGCGCGCGCTCATCCCAGTGTCTAAGGCGCTCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS GCA 72 bp GGACCCGTGTCCGCCCCGTTGTTCTCGGGCTGCACCTaGGGGTTCATCCGCGCCAGAAGCATGGATGCGGCT +
Preference number: 6 (lower is better)
Translates to: GPVSAPLFSGCT*GFIRARSMDAA
Trigger: AGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp CGTTGCGCTCCTTCACCACCAGCAGCTCCGCAGTTTTaGGCGCCCGAAGGGGCTGCTCTGGACCCGTGTCCG +
Preference number: 6 (lower is better)
Translates to: RCAPSPPAAPQF*APEGAALDPCP
Trigger: CGGACACGGGTCCAGAGCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGCTGGTGGTGAAGGAGCGCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp GCAACTCCCAAGACCACCCGGGAGCGCCTTAGACACTaGGATGAGCGCGCGCTGAGCGGACGCAGGGTTCCC +
Preference number: 6 (lower is better)
Translates to: ATPKTTRERLRH*DERALSGRRVP
Trigger: GGGAACCCTGCGTCCGCTCAGCGCGCGCTCATCCCAGTGTCTAAGGCGCTCCCGGGTGGTCTTGGGAGTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CAA 72 bp CCGTTGCGCTCCTTCACCACCAGCAGCTCCGCAGTTTaGCGCGCCCGAAGGGGCTGCTCTGGACCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: PLRSFTTSSSAV*RARRGCSGPVS
Trigger: GGACACGGGTCCAGAGCAGCCCCTTCGGGCGCGCAAAACTGCGGAGCTGCTGGTGGTGAAGGAGCGCAACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp CTGCGGGTTCATCCGCGCCAGAAGCATGGATGCGGCTaGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCC +
Preference number: 6 (lower is better)
Translates to: LRVHPRQKHGCG*REELYRSWGHA
Trigger: GGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp CTGCACCTGCGGGTTCATCCGCGCCAGAAGCATGGATaGGGCTGGCGAGAGGAACTTTACCGGTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: LHLRVHPRQKHG*GWREELYRSWG
Trigger: CCCCCAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp TGCTCTGGACCCGTGTCCGCCCCGTTGTTCTCGGGCTaGACCTGCGGGTTCATCCGCGCCAGAAGCATGGAT +
Preference number: 6 (lower is better)
Translates to: CSGPVSAPLFSG*TCGFIRARSMD
Trigger: ATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCGAGAACAACGGGGCGGACACGGGTCCAGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp CGGGCTGCACCTGCGGGTTCATCCGCGCCAGAAGCATaGATGCGGCTGGCGAGAGGAACTTTACCGGTCCTG +
Preference number: 6 (lower is better)
Translates to: RAAPAGSSAPEA*MRLARGTLPVL
Trigger: CAGGACCGGTAAAGTTCCTCTCGCCAGCCGCATCCATGCTTCTGGCGCGGATGAACCCGCAGGTGCAGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp CGTTCACCCACTCTCGCCTGCCCCAAATGGCTGGGATaGAACTCACCGAGGCTGAGGGCAGCGTGCCGACCC +
Preference number: 6 (lower is better)
Translates to: RSPTLACPKWLG*NSPRLRAACRP
Trigger: GGGTCGGCACGCTGCCCTCAGCCTCGGTGAGTTCAATCCCAGCCATTTGGGGCAGGCGAGAGTGGGTGAACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CAA 90 bp ATGGTGTCCGAGGTGGGAGCGCAGCGGATGCCTGTGACCTGGACATaGGCATGGGGGTTCCTCCTTCTCCTCCAGGCAGGCTCAGATGGC +
Preference number: 6 (lower is better)
Translates to: MVSEVGAQRMPVTWT*AWGFLLLLQAGSDG
Trigger: GCCATCTGAGCCTGCCTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCCCACCTCGGACACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 72 bp CCCTCTGAGCCACCAGGTGGTGCTCGTTCTCTGGCGTaGTGCCATAGGCCAGTCTCAGGAGGAAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: PSEPPGGARSLA*CHRPVSGGRQD
Trigger: GTCCTGCCTTCCTCCTGAGACTGGCCTATGGCATCACGCCAGAGAACGAGCACCACCTGGTGGCTCAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414754.7
CDS CCA 72 bp GGAGCGCAGCGGATGCCTGTGACCTGGACATTGGCATaGGGGTTCCTCCTTCTCCTCCAGGCAGGCTCAGAT +
Preference number: 6 (lower is better)
Translates to: GAQRMPVTWTLA*GFLLLLQAGSD
Trigger: ATCTGAGCCTGCCTGGAGGAGAAGGAGGAACCCCCATGCCAATGTCCAGGTCACAGGCATCCGCTGCGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000379906.6
ENST00000414754.7
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp GGCGAGAGGAACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTGCTaGGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTTCCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: GERNFTGPGGTPRLC*DKGKRGGYPAVPPY
Trigger: GTAGGGAGGAACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTTCCTCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS TCA 72 bp CCCTCTGAGCCACCAGGTGGTGCTCGTTCTCTGGCGTaGTGCCATAGGCCAGTCTCTCCCAAAGAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: PSEPPGGARSLA*CHRPVSPKESP
Trigger: AGGGCTCTCTTTGGGAGAGACTGGCCTATGGCATCACGCCAGAGAACGAGCACCACCTGGTGGCTCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000566163.5
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp GGAAACAGAGGTTGGGGCACGCCGGAACTCAAGAGTTaGAGACTTCTGACAGCCCTCTGGGGGCGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: GNRGWGTPELKS*RLLTALWGRLK
Trigger: CTTCAGCCGCCCCCAGAGGGCTGTCAGAAGTCTCCAACTCTTGAGTTCCGGCGTGCCCCAACCTCTGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CAA 72 bp GGGAAAAGAGGTGGTTACCCGGCCGTTCCTCCCTACTaGCAACTCCCAAGACCACCCGGGAGCGCCTTAGAC +
Preference number: 6 (lower is better)
Translates to: GKRGGYPAVPPY*QLPRPPGSALD
Trigger: GTCTAAGGCGCTCCCGGGTGGTCTTGGGAGTTGCAAGTAGGGAGGAACGGCCGGGTAACCACCTCTTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS TCA 72 bp CGTTGTAGTAGAAGCCAACGTACAGGGCGATCAGGATaGCAGCATAGCCAACGCCTGGGCAGGGACAGGGGG +
Preference number: 6 (lower is better)
Translates to: RCSRSQRTGRSG*QHSQRLGRDRG
Trigger: CCCCCTGTCCCTGCCCAGGCGTTGGCTATGCTGTCATCCTGATCGCCCTGTACGTTGGCTTCTACTACAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567238.1
CDS GCA 72 bp CCCTGCAGCACTTTTCCTCGTTCACCCACTCTCGCCTaGCCCAAATGGCTGGGATTGAACTCACCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PCSTFPRSPTLA*PKWLGLNSPRL
Trigger: CAGCCTCGGTGAGTTCAATCCCAGCCATTTGGGGCAGGCGAGAGTGGGTGAACGAGGAAAAGTGCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CCA 72 bp ACTTTTCCTCGTTCACCCACTCTCGCCTGCCCCAAATaGCTGGGATTGAACTCACCGAGGCTGAGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: TFPRSPTLACPK*LGLNSPRLRAA
Trigger: CGCTGCCCTCAGCCTCGGTGAGTTCAATCCCAGCCATTTGGGGCAGGCGAGAGTGGGTGAACGAGGAAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CCA 72 bp ACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTGCTTaGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTTC +
Preference number: 6 (lower is better)
Translates to: TLPVLGARRGSA*IKGKEVVTRPF
Trigger: GAACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CCA 72 bp GGAGCCAACTTCCGCCGCAAGGCAGCACCACTGCGTTaGTTTGGTGTTGGTTCAGCTAGCACCACATCTCCG +
Preference number: 6 (lower is better)
Translates to: GANFRRKAAPLR*FGVGSASTTSP
Trigger: CGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp TTGGTGTGGTTGCCAAGCACGGAGCCATTGAGGAGCTaGGGGTCGGTACAGTTGGGGCTGTTCCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: LVWLPSTEPLRS*GSVQLGLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp TCCGCCGCAAGGCAGCACCACTGCGTTGGTTTGGTGTaGGTTCAGCTAGCACCACATCTCCGATTCACCCCG +
Preference number: 6 (lower is better)
Translates to: SAARQHHCVGLV*VQLAPHLRFTP
Trigger: CGGGGTGAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp GAGCCAACTTCCGCCGCAAGGCAGCACCACTGCGTTGGTTTGGTGTaGGTTCAGCTAGCACCACATCTCCGATTCACCCCGGGACAAATG +
Preference number: 6 (lower is better)
Translates to: EPTSAARQHHCVGLV*VQLAPHLRFTPGQM
Trigger: CATTTGTCCCGGGGTGAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp ATTCAGGAGCCAACTTCCGCCGCAAGGCAGCACCACTGCGTTGGTTaGGTGTTGGTTCAGCTAGCACCACATCTCCGATTCACCCCGGGA +
Preference number: 6 (lower is better)
Translates to: IQEPTSAARQHHCVG*VLVQLAPHLRFTPG
Trigger: TCCCGGGGTGAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTCCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 72 bp TGGAGTACTTGGTGTGGTTGCCAAGCACGGAGCCATTaGGGAGCTTGGGGTCGGTACAGTTGGGGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: WSTWCGCQARSH*GAWGRYSWGCS
Trigger: GGAACAGCCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp AACTTTACCGGTCCTGGGGGCACGCCGAGGCTCTGCTaGGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTT +
Preference number: 6 (lower is better)
Translates to: NFTGPGGTPRLC*DKGKRGGYPAV
Trigger: AACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAAGCAGAGCCTCGGCGTGCCCCCAGGACCGGTAAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CAA 90 bp TTGGATAAAGGGAAAAGAGGTGGTTACCCGGCCGTTCCTCCCTACTaGCAACTCCCAAGACCACCCGGGAGCGCCTTAGACACTGGGATG +
Preference number: 6 (lower is better)
Translates to: LDKGKRGGYPAVPPY*QLPRPPGSALDTGM
Trigger: CATCCCAGTGTCTAAGGCGCTCCCGGGTGGTCTTGGGAGTTGCAAGTAGGGAGGAACGGCCGGGTAACCACCTCTTTTCCCTTTATCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CAA 90 bp AACTCGGCTGCCGGCGTGAACTTGTACTTGGAGTACTTGGTGTGGTaGCCAAGCACGGAGCCATTGAGGAGCTTGGGGTCGGTACAGTTG +
Preference number: 6 (lower is better)
Translates to: NSAAGVNLYLEYLVW*PSTEPLRSLGSVQL
Trigger: CAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp GGCGCGCGTCCGCTGGAAAAATTTGGAAACAGAGGTTaGGGCACGCCGGAACTCAAGAGTTGGAGACTTCTG +
Preference number: 6 (lower is better)
Translates to: GARPLEKFGNRG*GTPELKSWRLL
Trigger: CAGAAGTCTCCAACTCTTGAGTTCCGGCGTGCCCCAACCTCTGTTTCCAAATTTTTCCAGCGGACGCGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CCA 72 bp CCAAATGTGAAGAGTTTCCGGTGTCGCTTCAGGACCTaGAAGTCATCTGCCAGGCCCGTGATGACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: PNVKSFRCRFRT*KSSARPVMTAS
Trigger: GGAGGCTGTCATCACGGGCCTGGCAGATGACTTCCAGGTCCTGAAGCGACACCGGAAACTCTTCACATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CCA 72 bp AGCACCACATCTCCGATTCACCCCGGGACAAATGTCTaGAGGCAGAAGGGGCCACATGCAGATGGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: STTSPIHPGTNV*RQKGPHADGKE
Trigger: CTCTTTGCCATCTGCATGTGGCCCCTTCTGCCTCCAGACATTTGTCCCGGGGTGAATCGGAGATGTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp GGGCGCGCGTCCGCTGGAAAAATTTGGAAACAGAGGTaGGGGCACGCCGGAACTCAAGAGTTGGAGACTTCT +
Preference number: 6 (lower is better)
Translates to: GRASAGKIWKQR*GHAGTQELETS
Trigger: AGAAGTCTCCAACTCTTGAGTTCCGGCGTGCCCCAACCTCTGTTTCCAAATTTTTCCAGCGGACGCGCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219833.13
ENST00000379906.6
CDS CAA 72 bp TTGGAGTACTTGGTGTGGTTGCCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTACAGTTGGGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: LEYLVWLPSTEP*RSLGSVQLGLF
Trigger: GAACAGCCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp AACTCGGCTGCCGGCGTGAACTTGTACTTGGAGTACTaGGTGTGGTTGCCAAGCACGGAGCCATTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: NSAAGVNLYLEY*VWLPSTEPLRS
Trigger: GCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAAGTACAAGTTCACGCCGGCAGCCGAGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp CCAACTTCCGCCGCAAGGCAGCACCACTGCGTTGGTTaGGTGTTGGTTCAGCTAGCACCACATCTCCGATTC +
Preference number: 6 (lower is better)
Translates to: PTSAARQHHCVG*VLVQLAPHLRF
Trigger: GAATCGGAGATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp AACTTGTACTTGGAGTACTTGGTGTGGTTGCCAAGCACGGAGCCATaGAGGAGCTTGGGGTCGGTACAGTTGGGGCTGTTCCAGGTGTGG +
Preference number: 6 (lower is better)
Translates to: NLYLEYLVWLPSTEP*RSLGSVQLGLFQVW
Trigger: CCACACCTGGAACAGCCCCAACTGTACCGACCCCAAGCTCCTCAATGGCTCCGTGCTTGGCAACCACACCAAGTACTCCAAGTACAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000219833.13
ENST00000379906.6
ENST00000414754.7
ENST00000561820.5
ENST00000566163.5
ENST00000567238.1
ENST00000568529.6
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp ATTCAGGAGCCAACTTCCGCCGCAAGGCAGCACCACTaGGTTGGTTTGGTGTTGGTTCAGCTAGCACCACAT +
Preference number: 6 (lower is better)
Translates to: IQEPTSAARQHH*VGLVLVQLAPH
Trigger: ATGTGGTGCTAGCTGAACCAACACCAAACCAACGCAGTGGTGCTGCCTTGCGGCGGAAGTTGGCTCCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp CCACTCCTACCCCAGGGTCCTTGGCATGAATGTATTTaGATCTCCCAGTGCTGCTGTACAAGGCAGGCTTAT +
Preference number: 6 (lower is better)
Translates to: PLLPQGPWHECI*ISQCCCTRQAY
Trigger: ATAAGCCTGCCTTGTACAGCAGCACTGGGAGATGCAAATACATTCATGCCAAGGACCCTGGGGTAGGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS TCA 72 bp ATAGCCTCTCTGGGATATCTTCCCAACTCTAATTTGTaGGGCCAAACCACTCCTACCCCAGGGTCCTTGGCA +
Preference number: 6 (lower is better)
Translates to: IASLGYLPNSNL*GQTTPTPGSLA
Trigger: TGCCAAGGACCCTGGGGTAGGAGTGGTTTGGCCTCACAAATTAGAGTTGGGAAGATATCCCAGAGAGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS GCA 72 bp AAGAGGAAATGGCAGGCTCTCTCGGAAGCACGACCCTaGTCTAATGCAAAAGGCTTTGCTGACTGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: KRKWQALSEARP*SNAKGFADCLL
Trigger: GAGCAAACAGTCAGCAAAGCCTTTTGCATTAGAGCAGGGTCGTGCTTCCGAGAGAGCCTGCCATTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp CTGACATTGCATCCCCAGGAGACACTGCCTGCTATCTaGTTGCATATCTCTAGAGCTGGAGTTACCACTTCC +
Preference number: 6 (lower is better)
Translates to: LTLHPQETLPAI*LHISRAGVTTS
Trigger: GGAAGTGGTAACTCCAGCTCTAGAGATATGCAAGCAGATAGCAGGCAGTGTCTCCTGGGGATGCAATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CAA 72 bp GGATATCTGGCAAGAGTTGGTAGCTCTCCTTCTCCCTaGTCTCGTTTTCATCTCCCAAAGAGAGCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: GYLARVGSSPSP*SRFHLPKRALR
Trigger: ACGCAGGGCTCTCTTTGGGAGATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS CAA 72 bp ACATTGCATCCCCAGGAGACACTGCCTGCTATCTGCTaGCATATCTCTAGAGCTGGAGTTACCACTTCCAGC +
Preference number: 6 (lower is better)
Translates to: TLHPQETLPAIC*HISRAGVTTSS
Trigger: GCTGGAAGTGGTAACTCCAGCTCTAGAGATATGCAAGCAGATAGCAGGCAGTGTCTCCTGGGGATGCAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS TCA 72 bp TTGGGGAAAATTCAGAAGCCCACTAAGTGCCTAAGGTaGGGCTTATCTGTGCTGCTCCGACTTCTCCTACTG +
Preference number: 6 (lower is better)
Translates to: LGKIQKPTKCLR*GLSVLLRLLLL
Trigger: CAGTAGGAGAAGTCGGAGCAGCACAGATAAGCCTCACCTTAGGCACTTAGTGGGCTTCTGAATTTTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CCA 72 bp AAGGCAGCTTCAGGGATTTCTGTTCAGCAGGATATCTaGCAAGAGTTGGTAGCTCTCCTTCTCCCTTGTCTC +
Preference number: 6 (lower is better)
Translates to: KAASGISVQQDI*QELVALLLPCL
Trigger: GAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCCTGCTGAACAGAAATCCCTGAAGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219833.13
ENST00000561820.5
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp GGCAGGCTCTCTCGGAAGCACGACCCTGCTCTAATGCAAAAGGCTTaGCTGACTGTTTGCTCTCATTTCAACCAAGTAGACTCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: GRLSRKHDPALMQKA*LTVCSHFNQVDSAF
Trigger: AAAAGCTGAGTCTACTTGGTTGAAATGAGAGCAAACAGTCAGCAAAGCCTTTTGCATTAGAGCAGGGTCGTGCTTCCGAGAGAGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 72 bp GGATATAAAGTCACTAATGGGGCCCAGACCCCGACCTaGTTGTTCTCCATTCTTAAGCCTCACTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: GYKVTNGAQTPT*LFSILKPHCSQ
Trigger: CTGTGAACAGTGAGGCTTAAGAATGGAGAACAATCAGGTCGGGGTCTGGGCCCCATTAGTGACTTTATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp TCCAGCAACAGCCCATTCTCTATTCTGGTAGAATCTTaGAAGCTGTCTTCCTGGACTTCCTACCATTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSNSPFSILVES*KLSSWTSYHWH
Trigger: GTGCCAATGGTAGGAAGTCCAGGAAGACAGCTTGCAAGATTCTACCAGAATAGAGAATGGGCTGTTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CAA 72 bp GGATATCTGGCAAGAGTTGGTAGCTCTCCTTCTCCCTaGTCTCGTTTTCATCTGGAACTGTCTGATGTCCCT +
Preference number: 6 (lower is better)
Translates to: GYLARVGSSPSP*SRFHLELSDVP
Trigger: AGGGACATCAGACAGTTCCAGATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CAA 90 bp AAGGCAGCTTCAGGGATTTCTGTTCAGCAGGATATCTGGCAAGAGTaGGTAGCTCTCCTTCTCCCTTGTCTCGTTTTCATCTGGAACTGT +
Preference number: 6 (lower is better)
Translates to: KAASGISVQQDIWQE*VALLLPCLVFIWNC
Trigger: ACAGTTCCAGATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCCTGCTGAACAGAAATCCCTGAAGCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219833.13
CDS CAA 90 bp AAGGCAGCTTCAGGGATTTCTGTTCAGCAGGATATCTGGCAAGAGTaGGTAGCTCTCCTTCTCCCTTGTCTCGTTTTCATCTCCCAAAGA +
Preference number: 6 (lower is better)
Translates to: KAASGISVQQDIWQE*VALLLPCLVFISQR
Trigger: TCTTTGGGAGATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCCTGCTGAACAGAAATCCCTGAAGCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561820.5
CDS GCA 72 bp CAGGGTCCTTGGCATGAATGTATTTGCATCTCCCAGTaGTGCTGTACAAGGCAGGCTTATGACTGTCAAAAA +
Preference number: 6 (lower is better)
Translates to: QGPWHECICISQ*CCTRQAYDCQK
Trigger: TTTTTGACAGTCATAAGCCTGCCTTGTACAGCAGCACTGGGAGATGCAAATACATTCATGCCAAGGACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CCA 72 bp GTGGGTCACTATGACCAGACGCTCTTCTTTACTAGTTaGAAGCTGATCATAGATACACCCACCTCCCTTACA +
Preference number: 6 (lower is better)
Translates to: VGHYDQTLFFTS*KLIIDTPTSLT
Trigger: TGTAAGGGAGGTGGGTGTATCTATGATCAGCTTCCAACTAGTAAAGAAGAGCGTCTGGTCATAGTGACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CAA 72 bp TCAGGGATTTCTGTTCAGCAGGATATCTGGCAAGAGTaGGTAGCTCTCCTTCTCCCTTGTCTCGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: SGISVQQDIWQE*VALLLPCLVFI
Trigger: GATGAAAACGAGACAAGGGAGAAGGAGAGCTACCAACTCTTGCCAGATATCCTGCTGAACAGAAATCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219833.13
ENST00000561820.5
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS TCA 72 bp CACAAGGGAATGCCAGAAGTGCAGCTGCCTTCTGTTTaGTTCACTATAATAAAGCCCAACTCCAATTCTGGG +
Preference number: 6 (lower is better)
Translates to: HKGMPEVQLPSV*FTIIKPNSNSG
Trigger: CCCAGAATTGGAGTTGGGCTTTATTATAGTGAATCAAACAGAAGGCAGCTGCACTTCTGGCATTCCCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CCA 72 bp AATTTCCTCTCTGGAAACCAGCTAGAGGAAAATAAATaGCATTCTCTCGCCCCTTCCCATCCTCCAACACAT +
Preference number: 6 (lower is better)
Translates to: NFLSGNQLEENK*HSLAPSHPPTH
Trigger: ATGTGTTGGAGGATGGGAAGGGGCGAGAGAATGCCATTTATTTTCCTCTAGCTGGTTTCCAGAGAGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS GCA 72 bp GACCCTGCTCTAATGCAAAAGGCTTTGCTGACTGTTTaGTCTCATTTCAACCAAGTAGACTCAGCTTTTCAC +
Preference number: 6 (lower is better)
Translates to: DPALMQKALLTV*SHFNQVDSAFH
Trigger: GTGAAAAGCTGAGTCTACTTGGTTGAAATGAGAGCAAACAGTCAGCAAAGCCTTTTGCATTAGAGCAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 72 bp AAAAGCGTCAAGTGTCATATACAGTACACAGCACCCTaGTCCCGGGTGACCTCTGCTATTAAAAACAAGCTA +
Preference number: 6 (lower is better)
Translates to: KSVKCHIQYTAP*SRVTSAIKNKL
Trigger: TAGCTTGTTTTTAATAGCAGAGGTCACCCGGGACAAGGGTGCTGTGTACTGTATATGACACTTGACGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1
CDS CAA 90 bp TCAGCACTTGGGCCCACCACACACTCTCTGACAGCCTTTAGATATTaGAAGACATTGACTGAACAGTTATTTGACAACACCCCTTTTACA +
Preference number: 6 (lower is better)
Translates to: SALGPTTHSLTAFRY*KTLTEQLFDNTPFT
Trigger: TGTAAAAGGGGTGTTGTCAAATAACTGTTCAGTCAATGTCTTCAAATATCTAAAGGCTGTCAGAGAGTGTGTGGTGGGCCCAAGTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682050.1
CDS CCA 72 bp ATAGAAGCTATAGCCCTGCAGTCCTCACTGGGCAGATaGCAGGTAATGTGCATTAAAGTGCTTTATTACAAA +
Preference number: 6 (lower is better)
Translates to: IEAIALQSSLGR*QVMCIKVLYYK
Trigger: TTTGTAATAAAGCACTTTAATGCACATTACCTGCCATCTGCCCAGTGAGGACTGCAGGGCTATAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568943.6
ENST00000574918.2
ENST00000682050.1