Pregenerated sensors for SLC6A18 (Homo sapiens)

Ensembl gene IDs: ENSG00000164363

Ensembl transcript IDs: ENST00000324642.4, ENST00000513607.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGTCTGGGCGCGCGTCCCTGTCCCTCCACGTCCGCCTCCGCCGGGTaGGCAGCTGAGCAAGCGCGGCCACCGGGACCCACAGCACGGGCA	+
Preference number: 5 (lower is better) Translates to: CLGARPCPSTSASAG*AAEQARPPGPTARA Trigger: TGCCCGTGCTGTGGGTCCCGGTGGCCGCGCTTGCTCAGCTGCTCACCCGGCGGAGGCGGACGTGGAGGGACAGGGACGCGCGCCCAGACA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 90 bp	CGGCCGGCTTCAGCGCATGTCCGTGTCCGGGCGCATGTCCGTGTCTaGGCGCGTGTCCGTGTCCGGGCGCATGTCCGTGTCTGGGCGCGC	+
Preference number: 5 (lower is better) Translates to: RPASAHVRVRAHVRV*ARVRVRAHVRVWAR Trigger: GCGCGCCCAGACACGGACATGCGCCCGGACACGGACACGCGCCCAGACACGGACATGCGCCCGGACACGGACATGCGCTGAAGCCGGCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS TCA 90 bp	CGAGGTCGCAGGCGGCCGGGTCCGGTTCTGGGGCATGAGCCATGGTaGCTGAGTGCCCCAGGCTTCAGGGCAAGGGTGGTGCCTCACTCC	+
Preference number: 5 (lower is better) Translates to: RGRRRPGPVLGHEPW*LSAPGFRARVVPHS Trigger: GGAGTGAGGCACCACCCTTGCCCTGAAGCCTGGGGCACTCAGTCACCATGGCTCATGCCCCAGAACCGGACCCGGCCGCCTGCGACCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324642.4 ENST00000513607.2
CDS TCA 90 bp	GTCGCAGGCGGCCGGGTCCGGTTCTGGGGCATGAGCCATGGTGACTaGGTGCCCCAGGCTTCAGGGCAAGGGTGGTGCCTCACTCCACAC	+
Preference number: 5 (lower is better) Translates to: VAGGRVRFWGMSHGD*VPQASGQGWCLTPH Trigger: GTGTGGAGTGAGGCACCACCCTTGCCCTGAAGCCTGGGGCACTCAGTCACCATGGCTCATGCCCCAGAACCGGACCCGGCCGCCTGCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324642.4 ENST00000513607.2
CDS TCA 90 bp	GCATGGCCCACACAGGAGCCCCCGGCATGTGGAGGTCGGTCTCCGTaGAGACGACGAAGGCCAGGCCCGGGCCCGAGGCACTCTTATCCA	+
Preference number: 5 (lower is better) Translates to: AWPTQEPPACGGRSP*RRRRPGPGPRHSYP Trigger: TGGATAAGAGTGCCTCGGGCCCGGGCCTGGCCTTCGTCGTCTTCACGGAGACCGACCTCCACATGCCGGGGGCTCCTGTGTGGGCCATGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS TCA 90 bp	GGGGGAGCTGGGCCACCCTCTTGGGCCAGGTGGCGTTCAGGTGCATaGGGACGGCTGGGTAGTCGTCCCTGGAGATGCTCTGCTCTGGGA	+
Preference number: 5 (lower is better) Translates to: GGAGPPSWARWRSGA*GRLGSRPWRCSALG Trigger: TCCCAGAGCAGAGCATCTCCAGGGACGACTACCCAGCCGTCCTCATGCACCTGAACGCCACCTGGCCCAAGAGGGTGGCCCAGCTCCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 90 bp	GGCCACCCTCTTGGGCCAGGTGGCGTTCAGGTGCATGAGGACGGCTaGGTAGTCGTCCCTGGAGATGCTCTGCTCTGGGAAGTCAAAGTC	+
Preference number: 5 (lower is better) Translates to: GHPLGPGGVQVHEDG*VVVPGDALLWEVKV Trigger: GACTTTGACTTCCCAGAGCAGAGCATCTCCAGGGACGACTACCCAGCCGTCCTCATGCACCTGAACGCCACCTGGCCCAAGAGGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS TCA 90 bp	CAAAATTGTCGAAAATCTCCAGCCAGTAGTTCCCAGACTGCAGCGTaGAGCAGGTGGCGGAGAGGAAGCAGACCAGGCAGACCAGCCCAG	+
Preference number: 5 (lower is better) Translates to: QNCRKSPASSSQTAA*SRWRRGSRPGRPAQ Trigger: CTGGGCTGGTCTGCCTGGTCTGCTTCCTCTCCGCCACCTGCTTCACGCTGCAGTCTGGGAACTACTGGCTGGAGATTTTCGACAATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 90 bp	TACACGACTGCCCAGGAGGCTGCCAAGCAGATGAGCAGCCACCACTaGATGGAGCCACTGTCATTGATGTCGGCTGTGATGTTCAGTGTC	+
Preference number: 5 (lower is better) Translates to: YTTAQEAAKQMSSHH*MEPLSLMSAVMFSV Trigger: GACACTGAACATCACAGCCGACATCAATGACAGTGGCTCCATCCAGTGGTGGCTGCTCATCTGCTTGGCAGCCTCCTGGGCAGTCGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 90 bp	GTGCATGAGGACGGCTGGGTAGTCGTCCCTGGAGATGCTCTGCTCTaGGAAGTCAAAGTCGTTGATGAGGCTGAGGATGTTTCTGTCCAG	+
Preference number: 5 (lower is better) Translates to: VHEDGWVVVPGDALL*EVKVVDEAEDVSVQ Trigger: CTGGACAGAAACATCCTCAGCCTCATCAACGACTTTGACTTCCCAGAGCAGAGCATCTCCAGGGACGACTACCCAGCCGTCCTCATGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS GCA 90 bp	GAGGCTGAGGATGTTTCTGTCCAGGCAGTGCTCGTAGTCATTAGTTaGTTTGAACCCCAGGACAGAGAAGACAGCGATGGACGCGTACAG	+
Preference number: 5 (lower is better) Translates to: EAEDVSVQAVLVVIS*FEPQDREDSDGRVQ Trigger: CTGTACGCGTCCATCGCTGTCTTCTCTGTCCTGGGGTTCAAAGCAACTAATGACTACGAGCACTGCCTGGACAGAAACATCCTCAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 90 bp	CGAGGGGAACAGCTCGTATTTGGGGTTCCAGGCCTTGTATCTCAGTaGCTTCCAGAACAGGAGGATGATGTAAGCCACAAAGATGGTCAG	+
Preference number: 5 (lower is better) Translates to: RGEQLVFGVPGLVSQ*LPEQEDDVSHKDGQ Trigger: CTGACCATCTTTGTGGCTTACATCATCCTCCTGTTCTGGAAGCCACTGAGATACAAGGCCTGGAACCCCAAATACGAGCTGTTCCCCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS TCA 72 bp	ACACAGGAGCCCCCGGCATGTGGAGGTCGGTCTCCGTaGAGACGACGAAGGCCAGGCCCGGGCCCGAGGCAC	+
Preference number: 6 (lower is better) Translates to: TQEPPACGGRSP*RRRRPGPGPRH Trigger: GTGCCTCGGGCCCGGGCCTGGCCTTCGTCGTCTTCACGGAGACCGACCTCCACATGCCGGGGGCTCCTGTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 72 bp	GCCGTCCACACGCCGACGCTGCCCTTCCGCAGCCGCTaGCCGATGGCGAGCTCGACGTGGAAAATGGGGATC	+
Preference number: 6 (lower is better) Translates to: AVHTPTLPFRSR*PMASSTWKMGI Trigger: GATCCCCATTTTCCACGTCGAGCTCGCCATCGGCCAGCGGCTGCGGAAGGGCAGCGTCGGCGTGTGGACGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324642.4 ENST00000513607.2
CDS TCA 72 bp	AGGCGGCCGGGTCCGGTTCTGGGGCATGAGCCATGGTaGCTGAGTGCCCCAGGCTTCAGGGCAAGGGTGGTG	+
Preference number: 6 (lower is better) Translates to: RRPGPVLGHEPW*LSAPGFRARVV Trigger: CACCACCCTTGCCCTGAAGCCTGGGGCACTCAGTCACCATGGCTCATGCCCCAGAACCGGACCCGGCCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000324642.4 ENST00000513607.2
CDS TCA 72 bp	GGGCCACCCTCTTGGGCCAGGTGGCGTTCAGGTGCATaGGGACGGCTGGGTAGTCGTCCCTGGAGATGCTCT	+
Preference number: 6 (lower is better) Translates to: GPPSWARWRSGA*GRLGSRPWRCS Trigger: AGAGCATCTCCAGGGACGACTACCCAGCCGTCCTCATGCACCTGAACGCCACCTGGCCCAAGAGGGTGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CAA 72 bp	AAGACAGCGATGGACGCGTACAGGGAGGTCATCCTGTaGACCAGGGCGATGACCACCGCATCCTTCTGGCAG	+
Preference number: 6 (lower is better) Translates to: KTAMDAYREVIL*TRAMTTASFWQ Trigger: CTGCCAGAAGGATGCGGTGGTCATCGCCCTGGTCAACAGGATGACCTCCCTGTACGCGTCCATCGCTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CAA 90 bp	AGGACAGAGAAGACAGCGATGGACGCGTACAGGGAGGTCATCCTGTaGACCAGGGCGATGACCACCGCATCCTTCTGGCAGTCATTCCTG	+
Preference number: 6 (lower is better) Translates to: RTEKTAMDAYREVIL*TRAMTTASFWQSFL Trigger: CAGGAATGACTGCCAGAAGGATGCGGTGGTCATCGCCCTGGTCAACAGGATGACCTCCCTGTACGCGTCCATCGCTGTCTTCTCTGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 72 bp	GACGGCTGGGTAGTCGTCCCTGGAGATGCTCTGCTCTaGGAAGTCAAAGTCGTTGATGAGGCTGAGGATGTT	+
Preference number: 6 (lower is better) Translates to: DGWVVVPGDALL*EVKVVDEAEDV Trigger: AACATCCTCAGCCTCATCAACGACTTTGACTTCCCAGAGCAGAGCATCTCCAGGGACGACTACCCAGCCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS TCA 72 bp	AGGCCTTGTATCTCAGTGGCTTCCAGAACAGGAGGATaGTGTAAGCCACAAAGATGGTCAGCAGCAGGGGAC	+
Preference number: 6 (lower is better) Translates to: RPCISVASRTGG*CKPQRWSAAGD Trigger: GTCCCCTGCTGCTGACCATCTTTGTGGCTTACATCATCCTCCTGTTCTGGAAGCCACTGAGATACAAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS GCA 72 bp	GATGTTTCTGTCCAGGCAGTGCTCGTAGTCATTAGTTaGTTTGAACCCCAGGACAGAGAAGACAGCGATGGA	+
Preference number: 6 (lower is better) Translates to: DVSVQAVLVVIS*FEPQDREDSDG Trigger: TCCATCGCTGTCTTCTCTGTCCTGGGGTTCAAAGCAACTAATGACTACGAGCACTGCCTGGACAGAAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324642.4
CDS CCA 72 bp	CAGCTCGTATTTGGGGTTCCAGGCCTTGTATCTCAGTaGCTTCCAGAACAGGAGGATGATGTAAGCCACAAA	+
Preference number: 6 (lower is better) Translates to: QLVFGVPGLVSQ*LPEQEDDVSHK Trigger: TTTGTGGCTTACATCATCCTCCTGTTCTGGAAGCCACTGAGATACAAGGCCTGGAACCCCAAATACGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000324642.4

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