RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A17 (Homo sapiens)

Ensembl gene IDs: ENSG00000197106

Ensembl transcript IDs: ENST00000331565.5, ENST00000465159.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCACACCTGCTCCCACCCTCCGCCTTGGAGCAGGTAGCCTCTTaGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCCTG +
Preference number: 1 (lower is better)
Translates to: LAHLLPPSALEQVAS*TRSNPVWAGQDGVL
Trigger: CAGGACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGGTGGGAGCAGGTGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GCAGGGCAGACCCTCTCTTCTTGGGCAAAGGGCCTGGCCTGGGCCTaGTGGCCACCTCAAGAAAGAGGCCAGGCCTGGACAAGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: AGQTLSSWAKGLAWA*WPPQERGQAWTSGQ
Trigger: CTGCCCACTTGTCCAGGCCTGGCCTCTTTCTTGAGGTGGCCACCAGGCCCAGGCCAGGCCCTTTGCCCAAGAAGAGAGGGTCTGCCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CTCTTTCAGGCACATCCCTGCCCTGGAGTTCCCTCTGCCTTCTGGTaGGCACTGTGTGGACAGCACCAAAGCCAGTGGGGGTGGGGACCC +
Preference number: 1 (lower is better)
Translates to: LFQAHPCPGVPSAFW*ALCGQHQSQWGWGP
Trigger: GGGTCCCCACCCCCACTGGCTTTGGTGCTGTCCACACAGTGCCCACCAGAAGGCAGAGGGAACTCCAGGGCAGGGATGTGCCTGAAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 90 bp CTCAGAAAACAGAACTTGGGGCTTCTGCCTAGGCCCTCCCAAGTCTaGGCCCTGAGCCCTGGCACACCTGCTCCCACCCTCCGCCTTGGA +
Preference number: 1 (lower is better)
Translates to: LRKQNLGLLPRPSQV*ALSPGTPAPTLRLG
Trigger: TCCAAGGCGGAGGGTGGGAGCAGGTGTGCCAGGGCTCAGGGCTCAGACTTGGGAGGGCCTAGGCAGAAGCCCCAAGTTCTGTTTTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp GAGGAGGCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTaGAGCCTTCTGCACAGGCTGGCCTCCATCCTGAAGACCAGCCCT +
Preference number: 1 (lower is better)
Translates to: EEALKVMAGGVAVVS*SLLHRLASILKTSP
Trigger: AGGGCTGGTCTTCAGGATGGAGGCCAGCCTGTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp TCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTaGGCTGGGCAGGATGGTGTCCTGTTCTCATGGCAGAGTGAGCCA +
Preference number: 1 (lower is better)
Translates to: SALEQVASWTRSNPV*AGQDGVLFSWQSEP
Trigger: TGGCTCACTCTGCCATGAGAACAGGACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp AGATGCAGGAGCACACACCACACACCCCAGGCAGGGCCAAGGACATaGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACC +
Preference number: 1 (lower is better)
Translates to: RCRSTHHTPQAGPRT*EDSTQGPGQRRFLT
Trigger: GGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTGGCCCTGCCTGGGGTGTGTGGTGTGTGCTCCTGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CTTCTGCACAGGCTGGCCTCCATCCTGAAGACCAGCCCTTGCCTTTaGCAGCCTCTACTGTCCACAGCACTGCCTATGGCACTGGCCACT +
Preference number: 1 (lower is better)
Translates to: LLHRLASILKTSPCL*QPLLSTALPMALAT
Trigger: AGTGGCCAGTGCCATAGGCAGTGCTGTGGACAGTAGAGGCTGCCAAAGGCAAGGGCTGGTCTTCAGGATGGAGGCCAGCCTGTGCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GAGAATGGGTTCTCTTCCAGAGGAGGCCCTGAAGGTAATGGCAGGTaGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACAGGCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: ENGFSSRGGPEGNGR*GRCCQLQPSAQAGL
Trigger: GAGGCCAGCCTGTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGCCTCCTCTGGAAGAGAACCCATTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp GACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACCCCTaGACATGTATTGCTGGAGGGCAGAAGCTGACCTCACTGGCATTA +
Preference number: 1 (lower is better)
Translates to: DSERGFSWHWESSNP*TCIAGGQKLTSLAL
Trigger: TAATGCCAGTGAGGTCAGCTTCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CCACAGCACTGCCTATGGCACTGGCCACTGTGGGCCAGGAAGGCTTaGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGGGC +
Preference number: 1 (lower is better)
Translates to: PQHCLWHWPLWARKA*ERFPRCLHMMCTLG
Trigger: GCCCAGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCACAGTGGCCAGTGCCATAGGCAGTGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GGAGGCAGGGGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTaGGAGTCACAGATCAGCACGCTACACACACCCACACTCACGTAT +
Preference number: 1 (lower is better)
Translates to: GGRGRERGLQEGGEH*ESQISTLHTPTLTY
Trigger: ATACGTGAGTGTGGGTGTGTGTAGCGTGCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCCCCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 90 bp CGGCCTGGTGTGTATGCTTGGGTCTGTATAAAGCAGAGCTTTCAATaGGAAGAGGCCCTAGGCCCCCTCCCCCAGCCAAAGTCATCGGGC +
Preference number: 1 (lower is better)
Translates to: RPGVYAWVCIKQSFQ*EEALGPLPQPKSSG
Trigger: GCCCGATGACTTTGGCTGGGGGAGGGGGCCTAGGGCCTCTTCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp ACTGCAGGTGGCAAGTTACAGGGAGAGAGGGAGGTGAGTGACTCCTaGAGTGGCCACTTGGAATCTCCCATGGACTGGGAAGCAGGCCTT +
Preference number: 1 (lower is better)
Translates to: TAGGKLQGEREVSDS*SGHLESPMDWEAGL
Trigger: AAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCTCCCTGTAACTTGCCACCTGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CTTGCCTTTGGCAGCCTCTACTGTCCACAGCACTGCCTATGGCACTaGCCACTGTGGGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGT +
Preference number: 1 (lower is better)
Translates to: LAFGSLYCPQHCLWH*PLWARKAWERFPRC
Trigger: ACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCACAGTGGCCAGTGCCATAGGCAGTGCTGTGGACAGTAGAGGCTGCCAAAGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 90 bp CCTAAGAACTGCAGGTGGCAAGTTACAGGGAGAGAGGGAGGTGAGTaGCTCCTGCAGTGGCCACTTGGAATCTCCCATGGACTGGGAAGC +
Preference number: 1 (lower is better)
Translates to: PKNCRWQVTGREGGE*LLQWPLGISHGLGS
Trigger: GCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCTCCCTGTAACTTGCCACCTGCAGTTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp CAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATaGAGCAGTGCTATGAGATCCCTCTTGGGGTCTCGCCATCTTAAG +
Preference number: 1 (lower is better)
Translates to: QAALFKHCQDCVNGK*SSAMRSLLGSRHLK
Trigger: CTTAAGATGGCGAGACCCCAAGAGGGATCTCATAGCACTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp TTACATGGCTACAATTTGGCGGAGGCTCTTGGAGGGCTAGATGAGTaGGGTCCTGAATTAGGAAACAGAGCTGCTCCCAGCCTCCTGCTC +
Preference number: 1 (lower is better)
Translates to: LHGYNLAEALGGLDE*GPELGNRAAPSLLL
Trigger: GAGCAGGAGGCTGGGAGCAGCTCTGTTTCCTAATTCAGGACCCCACTCATCTAGCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp AAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGGGCGGCTGTaGTTGTGTAATAAGGAGAGTGAGTGGTGGCTCAAAGGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: KVSKVSAHDVHTGRL*LCNKESEWWLKGAV
Trigger: CACTGCCCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACACCTTGGAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp GCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTaGACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGGT +
Preference number: 1 (lower is better)
Translates to: ARKAWERFPRCLHMM*TLGGCACVIRRVSG
Trigger: ACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GCAGTGGCCACTTGGAATCTCCCATGGACTGGGAAGCAGGCCTTATaGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGGCTCTTGG +
Preference number: 1 (lower is better)
Translates to: AVATWNLPWTGKQAL*VVPITWLQFGGGSW
Trigger: CCAAGAGCCTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CATCCATCTCTCTGCAGACATTTACTCTTGGGTCAGGTTCCTCCCTaGCTGCACTCTGAGAATGGGTTCTCTTCCAGAGGAGGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: HPSLCRHLLLGQVPP*LHSENGFSSRGGPE
Trigger: TTCAGGGCCTCCTCTGGAAGAGAACCCATTCTCAGAGTGCAGCCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGCAGAGAGATGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTaGTGGCTCAAAGGGGCAGTGAAATTATCTGTCTTTCCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: DVHTGRLCLCNKESE*WLKGAVKLSVFPQE
Trigger: CTCCTGGGGAAAGACAGATAATTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GAGGTGAGTGACTCCTGCAGTGGCCACTTGGAATCTCCCATGGACTaGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATT +
Preference number: 1 (lower is better)
Translates to: EVSDSCSGHLESPMD*EAGLMGCSNYMATI
Trigger: AATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 90 bp TCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGTGCTATaGGATCCCTCTTGGGGTCTCGCCATCTTAAGAATCCTAGTACTT +
Preference number: 1 (lower is better)
Translates to: SNTVRTASTANAAVL*DPSWGLAILRILVL
Trigger: AAGTACTAGGATTCTTAAGATGGCGAGACCCCAAGAGGGATCTCATAGCACTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GCTCCAAACCATCTAATTTGTGCTAGGAACCAACAATTTGTGCTCTaGAAACCTCTCCGTGCACTGTCCTTCTCTCTCCAGGAAAGAGGC +
Preference number: 1 (lower is better)
Translates to: APNHLICARNQQFVL*KPLRALSFSLQERG
Trigger: GCCTCTTTCCTGGAGAGAGAAGGACAGTGCACGGAGAGGTTTCCAGAGCACAAATTGTTGGTTCCTAGCACAAATTAGATGGTTTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp CCCTCTTGGGGTCTCGCCATCTTAAGAATCCTAGTACTTTTCCTCTaGAGAAGAGCTAGCGATTCTACTGGGAACAGCAAGAAGCTGACT +
Preference number: 1 (lower is better)
Translates to: PSWGLAILRILVLFL*RRASDSTGNSKKLT
Trigger: AGTCAGCTTCTTGCTGTTCCCAGTAGAATCGCTAGCTCTTCTCCAGAGGAAAAGTACTAGGATTCTTAAGATGGCGAGACCCCAAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 90 bp TGTTCTGAACTTATGCCAGAACCCAAAGTGACGGCCTGGTGTGTATaGTTGGGTCTGTATAAAGCAGAGCTTTCAATGAGAAGAGGCCCT +
Preference number: 1 (lower is better)
Translates to: CSELMPEPKVTAWCV*LGLYKAELSMRRGP
Trigger: AGGGCCTCTTCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCATAAGTTCAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 90 bp GACTTGAATTGTTCTGAACTTATGCCAGAACCCAAAGTGACGGCCTaGTGTGTATGCTTGGGTCTGTATAAAGCAGAGCTTTCAATGAGA +
Preference number: 1 (lower is better)
Translates to: DLNCSELMPEPKVTA*CVCLGLYKAELSMR
Trigger: TCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCATAAGTTCAGAACAATTCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp CCTGGCACACCTGCTCCCACCCTCCGCCTTGGAGCAGGTAGCCTCTaGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: PGTPAPTLRLGAGSL*DQEQPRLGWAGWCP
Trigger: AGGACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGGTGGGAGCAGGTGTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGAGCCCTGGCACACCTaGTCCCACCCTCCGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHEPWHT*SHPPPW
Trigger: CCAAGGCGGAGGGTGGGAGCAGGTGTGCCAGGGCTC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACCCCTGTGAAGGGACTTaGGGACCTGGTCCTCTCCTG +
Preference number: 2 (lower is better)
Translates to: PTQADSERGFSWHWESSNPCEGT*GPGPLL
Trigger: CAGGAGAGGACCAGGTCCCCAAGTCCCTTCACAGGG...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR TCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCCAAGGTGTCTGCACATaGTGTGCACACTGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAQGVCT*CAHWAA
Trigger: AGCCGCCCAGTGTGCACATCATGTGCAGACACCTTG...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR TCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGGCTGGCCTCCATCCTaGAGACCAGCCCTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKGWPPS*RPALAF
Trigger: AAAGGCAAGGGCTGGTCTTCAGGATGGAGGCCAGCC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTTCTGGTCCCGGTCACTaGACTCCCAGACAAGATGCA +
Preference number: 2 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERSGPGH*TPRQDA
Trigger: TGCATCTTGTCTGGGAGTGCAGTGACCGGGACCAGA...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCAATACTGCAGGCCTGTaGAGTGCCTGGGACCGTGTC +
Preference number: 2 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRANTAGL*SAWDRV
Trigger: GACACGGTCCCAGGCACTGCACAGGCCTGCAGTATT...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACCTTGGGCAAAGGGCCTaGCCTGGGCCTGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: NTQRRHSKRLQRALARPHLGQRA*PGPGGH
Trigger: GTGGCCACCAGGCCCAGGCCAGGCCCTTTGCCCAAG...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCAGACCCTCTCTTCTTaGGCAAAGGGCCTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHQTLSS*AKGLAW
Trigger: CCAGGCCAGGCCCTTTGCCCAAGAAGAGAGGGTCTG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGAATCTCCCATGGACTaGGAAGCAGGCCTTATGGGT +
Preference number: 2 (lower is better)
Translates to: PSALEQVASWTRSNPVWAESPMD*EAGLMG
Trigger: ACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTC...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCGGTCAGGTTCCTCCCTaGCTGCACTCTGAGAATGGG +
Preference number: 2 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAGQVPP*LHSENG
Trigger: CCCATTCTCAGAGTGCAGCCAGGGAGGAACCTGACC...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACTCGGGTGAGGGGGACTaGGGTGGGATGTTGTGCCCC +
Preference number: 2 (lower is better)
Translates to: NTQRRHSKRLQRALARPHSGEGD*GGMLCP
Trigger: GGGGCACAACATCCCACCGCAGTCCCCCTCACCCGA...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATACATGGCTACAATTTaGCGGAGGCTCTTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: LGAGSLLDQEQPRLGWAGYMATI*RRLLEG
Trigger: GCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTA...TCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCGAGCAGGTAGCCTCTTaGACCAGGAGCAACCCCGTC +
Preference number: 2 (lower is better)
Translates to: GRERGLQEGGEHWESQISEQVAS*TRSNPV
Trigger: GACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTC...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAGGTGGGGAAGGTTCTaGTCCCGGTCACTGCACTCC +
Preference number: 2 (lower is better)
Translates to: GRERGLQEGGEHWESQISRWGRF*SRSLHS
Trigger: GGAGTGCAGTGACCGGGACCAGAACCTTCCCCACCT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCACCCTGGAGTTCCCTCTaGCTTCTGGTGGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPPWSSL*LLVGTV
Trigger: CACAGTGCCCACCAGAAGGCAGAGGGAACTCCAGGG...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTGAAAGAGGCCAGGCCTaGACAAGTGGGCAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPERGQA*TSGQVE
Trigger: CTCAACCTGCCCACTTGTCCAGGCCTGGCCTCTTTC...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCCAACCCCGTCTGGGCTaGGCAGGATGGTGTCCTGTT +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVQPRLG*AGWCPV
Trigger: AACAGGACACCATCCTGCCCAGCCCAGACGGGGTTG...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp TCCACAGCACTGCCTATGGCACTGGCCACTGTGGGCCAGGAAGGCTaGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGGG +
Preference number: 2 (lower is better)
Translates to: STALPMALATVGQEG*GKVSKVSAHDVHTG
Trigger: CCCAGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCACAGTGGCCAGTGCCATAGGCAGTGCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp TCTGTCCCTCCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTaGCGACCCTTCGTGAGGGTGTCCGGGTTGAGCACTGTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SVPPGPKSNLSHKSD*RPFVRVSGLSTVAC
Trigger: ACAGGCCACAGTGCTCAACCCGGACACCCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGGAGGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR TCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCAGAGAGGGAGGTGAGTaGCTCCTGCAGTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVREGGE*LLQWPL
Trigger: AAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCT...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAGGCCTGTTTCTGCCCTaGCCACCAGAGCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPGLFLP*PPELSK
Trigger: CTTTGAGAGCTCTGGTGGGCAGGGCAGAAACAGGCC...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTAGGAGCAACCCCGTCTaGGCTGGGCAGGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTRSNPV*AGQDGV
Trigger: GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCT...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACTTCTGGCAAACCCAGTaGTGTGAAGGCAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: PTQADSERGFSWHWESSNFWQTQ*CEGNES
Trigger: TGACTCATTGCCTTCACACCACTGGGTTTGCCAGAA...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGAGAACTTGGGGCTTCTaGCTAGGCCCTCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQRTWGF*LGPPKS
Trigger: AGACTTGGGAGGGCCTAGGCAGAAGCCCCAAGTTCT...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAGGTTCCTCCCTGGCTaGACTCTGAGAATGGGTTCT +
Preference number: 2 (lower is better)
Translates to: GRERGLQEGGEHWESQISRFLPG*TLRMGS
Trigger: AGAACCCATTCTCAGAGTGCAGCCAGGGAGGAACCT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACCTGGGCTGGGCAGGATaGTGTCCTGTTCTCATGGCA +
Preference number: 2 (lower is better)
Translates to: NTQRRHSKRLQRALARPHLGWAG*CPVLMA
Trigger: TGCCATGAGAACAGGACACCATCCTGCCCAGCCCAG...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGAAGGTAATGGCAGGTaGGGTCGCTGTTGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVEGNGR*GRCCQL
Trigger: CAGCTGACAACAGCGACCCCACCTGCCATTACCTTC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp AAGTTACAGGGAGAGAGGGAGGTGAGTGACTCCTGCAGTGGCCACTaGGAATCTCCCATGGACTGGGAAGCAGGCCTTATGGGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: KLQGEREVSDSCSGH*ESPMDWEAGLMGCS
Trigger: GGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCTCCCTGTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR TCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCTACCAAGGCTCATGCTaGAGCCAAGGGCAGCACATA +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVYQGSC*SQGQHI
Trigger: TATGTGCTGCCCTTGGCTTCAGCATGAGCCTTGGTA...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGTGGCTAAGCCCTAATTaGGGTGGGGAAGGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQWLSPN*GGEGSG
Trigger: ACCAGAACCTTCCCCACCTCAATTAGGGCTTAGCCA...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGAGGTGAGTGACTCCTaGAGTGGCCACTTGGAATCT +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVEVSDS*SGHLES
Trigger: AGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCCACTCCCAGACAAGATaGAGGAGCACACACCACACA +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVHSQTR*RSTHHT
Trigger: TGTGTGGTGTGTGCTCCTGCATCTTGTCTGGGAGTG...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCCTGGAAACCTCTCCGTaGACTGTCCTTCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVLETSP*TVLLSP
Trigger: TGGAGAGAGAAGGACAGTGCACGGAGAGGTTTCCAG...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGGAGGGAGGGGAGTGTaGTTCACCATTGTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: NTQRRHSKRLQRALARPHGGRGV*FTIVLQ
Trigger: TTGGAGCACAATGGTGAAGCACACTCCCCTCCCTCC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCCTGCAGTGGCCACTTaGAATCTCCCATGGACTGGG +
Preference number: 2 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTPAVAT*NLPWTG
Trigger: CCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp TCTCCTGGCACTGGGAAAGCAGCAACCCCTGCACATGTATTGCTGGAGGGCAGAGCAGACATTTACTCTTaGGTCAGGTTCCTCCCTGGC +
Preference number: 2 (lower is better)
Translates to: SPGTGKAATPAHVLLEGRADIYS*VRFLPG
Trigger: GCCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGC...TCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGAAAAGCTCATCTCTTTaGGGAGATGTGGGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLKSSSL*GDVGLS
Trigger: AGAGAGACCCACATCTCCCCAAAGAGATGAGCTTTT...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACATTAGGAAACAGAGCTaGTCCCAGCCTCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: NTQRRHSKRLQRALARPHIRKQS*SQPPAQ
Trigger: CTGAGCAGGAGGCTGGGAGCAGCTCTGTTTCCTAAT...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAAAACACTGTCAGGACTaGGTCAACGGCAAATGCAGC +
Preference number: 2 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPKHCQD*VNGKCS
Trigger: GCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGTTGTTCCAATTACATaGCTACAATTTGGCGGAGGC +
Preference number: 2 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKVVPIT*LQFGGG
Trigger: GCCTCCGCCAAATTGTAGCCATGTAATTGGAACAAC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTGGGAAGCAGGCCTTATaGGTTGTTCCAATTACATGG +
Preference number: 2 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPGKQAL*VVPITW
Trigger: CCATGTAATTGGAACAACCCATAAGGCCTGCTTCCC...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAACTTGGAATCTCCCATaGACTGGGAAGCAGGCCTTA +
Preference number: 2 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPTWNLP*TGKQAL
Trigger: TAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp TGGCCACTTGGAATCTCCCATGGACTGGGAAGCAGGCCTTATGGGTaGTTCCAATTACATGGCTACAATTTGGCGGAGGCTCTTGGAGGG +
Preference number: 2 (lower is better)
Translates to: WPLGISHGLGSRPYG*FQLHGYNLAEALGG
Trigger: CCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGCCTAAGAACTGCAGGTaGCAAGTTACAGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRPKNCR*QVTGRE
Trigger: CTCTCTCCCTGTAACTTGCCACCTGCAGTTCTTAGG...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCACAGAGCTCTCAAAGATaGAGCCAGTATTCCCTCCTT +
Preference number: 2 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPQSSQR*SQYSLL
Trigger: AAGGAGGGAATACTGGCTCCATCTTTGAGAGCTCTG...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp GTTTCCAAGGTGTCTGCACATGATGTGCACACTGGGCGGCTGTGCTaGTGTAATAAGGAGAGTGAGTGGTGGCTCAAAGGGGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: VSKVSAHDVHTGRLC*CNKESEWWLKGAVK
Trigger: TTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACACCTTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCACAGCCCTAAGAACTaGAGGTGGCAAGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSHSPKN*RWQVTG
Trigger: CCCTGTAACTTGCCACCTGCAGTTCTTAGGGCTGTG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTaGGCGGAGGCTCTTGGAGGGCTAGATGAGTGGGGTCCTGAATTA +
Preference number: 2 (lower is better)
Translates to: LGSRPYGLFQLHGYN*AEALGGLDEWGPEL
Trigger: TAATTCAGGACCCCACTCATCTAGCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCAACAATTTGTGCTCTaGAAACCTCTCCGTGCACTG +
Preference number: 2 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSQQFVL*KPLRAL
Trigger: CAGTGCACGGAGAGGTTTCCAGAGCACAAATTGTTG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 90 bp TCTGAACTTATGCCAGAACCCAAAGTGACGGCCTGGTGTGTATGCTaGGGTCTGTATAAAGCAGAGCTTTCAATGAGAAGAGGCCCTAGG +
Preference number: 2 (lower is better)
Translates to: SELMPEPKVTAWCVC*GLYKAELSMRRGPR
Trigger: CCTAGGGCCTCTTCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCATAAGTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTTGTGCTTCACCATTGTaGTCCAAACCATCTAATTTG +
Preference number: 2 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSCASPL*SKPSNL
Trigger: CAAATTAGATGGTTTGGAGCACAATGGTGAAGCACA...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR GCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGGTTGGGGGATAGACTaGTCCCAGGCTTGGGGGAAC +
Preference number: 2 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVGWGID*SQAWGN
Trigger: GTTCCCCCAAGCCTGGGAGCAGTCTATCCCCCAACC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGCAGGGCCAAGGACATaGGAAGATTCCACCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVAGPRT*EDSTQG
Trigger: TCCCTGGGTGGAATCTTCCCATGTCCTTGGCCCTGC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGGTGTCCTGTTCTCATaGCAGAGTGAGCCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVGVLFS*QSEPKS
Trigger: GGACTTTGGCTCACTCTGCCATGAGAACAGGACACC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGGAGGGCTAGATGAGTaGGGTCCTGAATTAGGAAAC +
Preference number: 2 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVGGLDE*GPELGN
Trigger: GTTTCCTAATTCAGGACCCCACTCATCTAGCCCTCC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAAGGAGAGTGAGTGGTaGCTCAAAGGGGCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVKESEW*LKGAVK
Trigger: TTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp AAAGCAGCCCCTCCGCCTGGTAATACTGCAGGCCTGTaGAGTGCCTGGGACCGTGTCTCCTGGGCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: KAAPPPGNTAGL*SAWDRVSWAPA
Trigger: GGCTGGGGCCCAGGAGACACGGTCCCAGGCACTGCACAGGCCTGCAGTATTACCAGGCGGAGGGGCTGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp CTGCTCCCACCCTCCGCCTTGGAGCAGGTAGCCTCTTaGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LLPPSALEQVAS*TRSNPVWAGQD
Trigger: ATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGGTGGGAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 72 bp TGTCTCCTGGGCCCCAGCCTCATGACCCACACAGGCTaGCTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAG +
Preference number: 3 (lower is better)
Translates to: CLLGPSLMTHTG*LGAGVLLALGK
Trigger: CTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGGTCATGAGGCTGGGGCCCAGGAGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGGAGCAGGTAGCCTCTaGGACCAGGAGCAACCCCGT +
Preference number: 3 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERGAGSL*DQEQPR
Trigger: ACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTCAGGTGGGGTCGCTGTaGTCAGCTGCAGCCTTCTGC +
Preference number: 3 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERQVGSL*SAAAFC
Trigger: GCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTG...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTTCCTGCAGTGGCCACTaGGAATCTCCCATGGACTGG +
Preference number: 3 (lower is better)
Translates to: PSALEQVASWTRSNPVWASCSGH*ESPMDW
Trigger: CCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGA...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp GAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTaGGCTGGGCAGGATGGTGTCCTGTTCTCATGGCAG +
Preference number: 3 (lower is better)
Translates to: EQVASWTRSNPV*AGQDGVLFSWQ
Trigger: CTGCCATGAGAACAGGACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGACCAGCCCTTGCCTTaGGCAGCCTCTACTGTCCAC +
Preference number: 3 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKDQPLP*AASTVH
Trigger: GTGGACAGTAGAGGCTGCCAAAGGCAAGGGCTGGTC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCAGCCACAAGAGTGACTaGCGACCCTTCGTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRASHKSD*RPFVRV
Trigger: CACCCTCACGAAGGGTCGCAAGTCACTCTTGTGGCT...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 72 bp GGCTGGGCAGGATGGTGTCCTGTTCTCATGGCAGAGTaGGCCAAAGTCCACTCTCCTTCCCCAGCCCCAAGG +
Preference number: 3 (lower is better)
Translates to: GWAGWCPVLMAE*AKVHSPSPAPR
Trigger: CCTTGGGGCTGGGGAAGGAGAGTGGACTTTGGCTCACTCTGCCATGAGAACAGGACACCATCCTGCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp CTGCACAGGCTGGCCTCCATCCTGAAGACCAGCCCTTaGCTTTGGCAGCCTCTACTGTCCACAGCACTGCCT +
Preference number: 3 (lower is better)
Translates to: LHRLASILKTSP*LWQPLLSTALP
Trigger: AGGCAGTGCTGTGGACAGTAGAGGCTGCCAAAGGCAAGGGCTGGTCTTCAGGATGGAGGCCAGCCTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp CCCGTCTGGGCTGGGCAGGATGGTGTCCTGTTCTCATaGCAGAGTGAGCCAAAGTCCACTCTCCTTCCCCAG +
Preference number: 3 (lower is better)
Translates to: PVWAGQDGVLFS*QSEPKSTLLPQ
Trigger: CTGGGGAAGGAGAGTGGACTTTGGCTCACTCTGCCATGAGAACAGGACACCATCCTGCCCAGCCCAGACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTTTACATGGCTACAATTaGGCGGAGGCTCTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERLHGYN*AEALGG
Trigger: CCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAA...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGCTCAGAAAACAGAACTaGGGGCTTCTGCCTAGGCCC +
Preference number: 3 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLLRKQN*GLLPRP
Trigger: GGGCCTAGGCAGAAGCCCCAAGTTCTGTTTTCTGAG...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp CTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTaGAGCCTTCTGCACAGGCTGGCCTCCATCCTGAAG +
Preference number: 3 (lower is better)
Translates to: LKVMAGGVAVVS*SLLHRLASILK
Trigger: CTTCAGGATGGAGGCCAGCCTGTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGTGAGGGTGTCCGGGTaGAGCACTGTGGCCTGTTTC +
Preference number: 3 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVVRVSG*STVACF
Trigger: GAAACAGGCCACAGTGCTCAACCCGGACACCCTCAC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp TTCTCTTCCAGAGGAGGCCCTGAAGGTAATGGCAGGTaGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACAG +
Preference number: 3 (lower is better)
Translates to: FSSRGGPEGNGR*GRCCQLQPSAQ
Trigger: CTGTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGCCTCCTCTGGAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTaGGAGTCACAGATCAGCACGCTACACACACCCACA +
Preference number: 3 (lower is better)
Translates to: GRERGLQEGGEH*ESQISTLHTPT
Trigger: TGTGGGTGTGTGTAGCGTGCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGAGTGTGCTTCACCATaGTGCTCCAAACCATCTAAT +
Preference number: 3 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERECASP*CSKPSN
Trigger: ATTAGATGGTTTGGAGCACAATGGTGAAGCACACTC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp AGGGGGCAGGCGGCCCTTTTCAAACACTGTCAGGACTaGGTCAACGGCAAATGCAGCAGTGCTATGAGATCC +
Preference number: 3 (lower is better)
Translates to: RGQAALFKHCQD*VNGKCSSAMRS
Trigger: GGATCTCATAGCACTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp TACTGTCCACAGCACTGCCTATGGCACTGGCCACTGTaGGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGT +
Preference number: 3 (lower is better)
Translates to: YCPQHCLWHWPL*ARKAWERFPRC
Trigger: ACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCACAGTGGCCAGTGCCATAGGCAGTGCTGTGGACAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAAATTCTGCTTGGGATTaGGCAAGGGGCCAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPNSAWD*ARGQVG
Trigger: TCCTACCTGGCCCCTTGCCAAATCCCAAGCAGAATT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACTGCAGACATTTACTCTaGGGTCAGGTTCCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: NTQRRHSKRLQRALARPHCRHLL*GQVPPW
Trigger: CCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGCA...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 72 bp GTGTATGCTTGGGTCTGTATAAAGCAGAGCTTTCAATaGGAAGAGGCCCTAGGCCCCCTCCCCCAGCCAAAG +
Preference number: 3 (lower is better)
Translates to: VYAWVCIKQSFQ*EEALGPLPQPK
Trigger: CTTTGGCTGGGGGAGGGGGCCTAGGGCCTCTTCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp CTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATaGAGCAGTGCTATGAGATCCCTCTTGGGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: LFKHCQDCVNGK*SSAMRSLLGSR
Trigger: GCGAGACCCCAAGAGGGATCTCATAGCACTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp GACTCCTGCAGTGGCCACTTGGAATCTCCCATGGACTaGGAAGCAGGCCTTATGGGTTGTTCCAATTACATG +
Preference number: 3 (lower is better)
Translates to: DSCSGHLESPMD*EAGLMGCSNYM
Trigger: CATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp CTCTGCAGACATTTACTCTTGGGTCAGGTTCCTCCCTaGCTGCACTCTGAGAATGGGTTCTCTTCCAGAGGA +
Preference number: 3 (lower is better)
Translates to: LCRHLLLGQVPP*LHSENGFSSRG
Trigger: TCCTCTGGAAGAGAACCCATTCTCAGAGTGCAGCCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR TCA 72 bp AGGAGGTTCCTCACCTTCTGCTACCAAGGCTCATGCTaGAGCCAAGGGCAGCACATACCTCAGAAAACAGAA +
Preference number: 3 (lower is better)
Translates to: RRFLTFCYQGSC*SQGQHIPQKTE
Trigger: TTCTGTTTTCTGAGGTATGTGCTGCCCTTGGCTTCAGCATGAGCCTTGGTAGCAGAAGGTGAGGAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp AAGGTGTCTGCACATGATGTGCACACTGGGCGGCTGTaGTTGTGTAATAAGGAGAGTGAGTGGTGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: KVSAHDVHTGRL*LCNKESEWWLK
Trigger: TTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp GCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTaGACACTGGGCGGCTGTGCTTGTGTAATAAGGAGA +
Preference number: 3 (lower is better)
Translates to: AWERFPRCLHMM*TLGGCACVIRR
Trigger: TCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp ACTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATaGCTACAATTTGGCGGAGGCTCTTGGAGGGCTAGA +
Preference number: 3 (lower is better)
Translates to: TGKQALWVVPIT*LQFGGGSWRAR
Trigger: TCTAGCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp GGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGGTaGCTCAAAGGGGCAGTGAAATTATCTGTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: GRLCLCNKESEW*LKGAVKLSVFP
Trigger: GGGAAAGACAGATAATTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCTAGGAACCAACAATTaGTGCTCTGGAAACCTCTCC +
Preference number: 3 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSLGTNN*CSGNLS
Trigger: GGAGAGGTTTCCAGAGCACAAATTGTTGGTTCCTAG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp ACTTGGAATCTCCCATGGACTGGGAAGCAGGCCTTATaGGTTGTTCCAATTACATGGCTACAATTTGGCGGA +
Preference number: 3 (lower is better)
Translates to: TWNLPWTGKQAL*VVPITWLQFGG
Trigger: TCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp ACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTaGTGGCTCAAAGGGGCAGTGAAATTATCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: TGRLCLCNKESE*WLKGAVKLSVF
Trigger: AAAGACAGATAATTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR GCA 72 bp CTTATGCCAGAACCCAAAGTGACGGCCTGGTGTGTATaGTTGGGTCTGTATAAAGCAGAGCTTTCAATGAGA +
Preference number: 3 (lower is better)
Translates to: LMPEPKVTAWCV*LGLYKAELSMR
Trigger: TCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp GGTCTCGCCATCTTAAGAATCCTAGTACTTTTCCTCTaGAGAAGAGCTAGCGATTCTACTGGGAACAGCAAG +
Preference number: 3 (lower is better)
Translates to: GLAILRILVLFL*RRASDSTGNSK
Trigger: CTTGCTGTTCCCAGTAGAATCGCTAGCTCTTCTCCAGAGGAAAAGTACTAGGATTCTTAAGATGGCGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CCA 72 bp TGTTCTGAACTTATGCCAGAACCCAAAGTGACGGCCTaGTGTGTATGCTTGGGTCTGTATAAAGCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: CSELMPEPKVTA*CVCLGLYKAEL
Trigger: AAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCATAAGTTCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR-3UTR CAA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAGGGAGATGGCAGGGTaGGGGGATAGACTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVREMAG*GDRLLP
Trigger: TGGGAGCAGTCTATCCCCCAACCCTGCCATCTCCCT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGCCGGCCGGTCCTCTaGATCCAGCTCCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAGRPVL*IQLLLH
Trigger: GTGGAGGAGGAGCTGGATGCAGAGGACCGGCCGGCC...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp CCTGCTCCCACCCTCCGCCTTGGAGCAGGTAGCCTCTaGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPTLRLGAGSL*DQEQPRLGWAG
Trigger: TCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGGTGGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCCGCGGCGGATCCTCTaGCCCACAGCCAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHPRRIL*PTASSR
Trigger: CCTGGAGCTGGCTGTGGGTCAGAGGATCCGCCGCGG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTGGCAGCGCCGGCTCTaGGGAGCAGAACGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAWQRRL*GAERSW
Trigger: CCAGCTCCGTTCTGCTCCGCAGAGCCGGCGCTGCCA...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGAGAGCGCGCGGGATTaGGAAGACTGGGGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERESARD*EDWGRV
Trigger: CACTCGGCCCCAGTCTTCGCAATCCCGCGCGCTCTC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACGCCACACACCGATGCTaGCGCGGCGGATCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNATHRC*RGGSSD
Trigger: GTCAGAGGATCCGCCGCGGCAGCATCGGTGTGTGGC...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTAGTGCCACACACCGATaGTGCCGCGGCGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWASATHR*CRGGSS
Trigger: AGAGGATCCGCCGCGGCAGCATCGGTGTGTGGCACT...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCGAGGCGGGCAGGGCTTaGGCAGTGGTCACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAEAGRA*AVVTAP
Trigger: CGGAGCTGTGACCACTGCCCAAGCCCTGCCCGCCTC...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACGGGCATGGGGGAAGGTaGCTCACTGGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNGHGGR*LTGHLA
Trigger: AGCAAGGTGCCCAGTGAGGCACCTTCCCCCATGCCC...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCGGGATTGCGAAGACTaGGGCCGAGTGCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHRDCED*GRVPPS
Trigger: GGAGGGCGGCACTCGGCCCCAGTCTTCGCAATCCCG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGGGGACCTGTCACGCGTaGGTAGTCGCGCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLGTCHA*VVAQTR
Trigger: CCGAGTCTGCGCGACTACCCACGCGTGACAGGTCCC...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACCGAACACCACAGGGATaGGCAGCGTCGCCACGACGA +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNRTPQG*AASPRR
Trigger: TCGTCGTGGCGACGCTGCCCATCCCTGTGGTGTTCG...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTAGGAGCAACCCCGTCTaGGCTGGGCAGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERRSNPV*AGQDGV
Trigger: GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCT...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGAGCAGGTAGCCTCTTaGACCAGGAGCAACCCCGTC +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAEQVAS*TRSNPV
Trigger: GACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTC...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGGCCTGTGCAGTGCCTaGGACCGTGTCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHGLCSA*DRVSWA
Trigger: GGCCCAGGAGACACGGTCCCAGGCACTGCACAGGCC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGCTGTTCTTCGGCATTaGTGCCACCTGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAAVLRH*CHLGRV
Trigger: TACACGGCCCAGGTGGCATCAATGCCGAAGAACAGC...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGGCTGGCCTCCATCCTaGAGACCAGCCCTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERGWPPS*RPALAF
Trigger: AAAGGCAAGGGCTGGTCTTCAGGATGGAGGCCAGCC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTCCTCCACCGCCTTCTaGTTGCCGCCTGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRASSTAF*LPPASP
Trigger: TGGTGAGGCAGGCGGCAAGCAGAAGGCGGTGGAGGA...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCAGCCATCCCCACGATaGTCCAGGCCACGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHQPSPR*SRPRGG
Trigger: GCCTCCTCGTGGCCTGGAGCATCGTGGGGATGGCTG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTGCTCCGACTCAGGGGTaGTGGCCAGCAGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPAPTQG*WPAGSR
Trigger: GCGGCTACCTGCTGGCCAGCACCCCTGAGTCGGAGC...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTCGGGTGAGGGGGACTaGGGTGGGATGTTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHSGEGD*GGMLCP
Trigger: GGGGCACAACATCCCACCGCAGTCCCCCTCACCCGA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCCCCTCTGCCTTCTGGTaGGCACTGTGTGGACAGCAC +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVPSAFW*ALCGQH
Trigger: GTGCTGTCCACACAGTGCCCACCAGAAGGCAGAGGG...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGGTCAAGGCCCAGGGCTaGGAACTGGTCCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLVKAQG*ELVLLH
Trigger: GTGAAGGAGGACCAGTTCTCAGCCCTGGGCCTTGAC...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGCTGGTCTCCAGGGGTaGTGTGCTGCCGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRAGLQG*CAAGPQ
Trigger: CTGGGGCCCGGCAGCACATCACCCCTGGAGACCAGC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGACAAGGTGTCTGCACATaGTGTGCACACTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGAGSLLDQEQPRLGWAGQGVCT*CAHWAA
Trigger: AGCCGCCCAGTGTGCACATCATGTGCAGACACCTTG...TCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCTTCATGTTGCCTCAGTaGGGAGGGCGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVFMLPQ*GGRKSP
Trigger: GGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAA...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGCGCAGACTCGGCCCGTaGACTCCGGCCGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRRRLGP*TPAEQL
Trigger: CAGCTGCTCGGCCGGAGTGCACGGGCCGAGTCTGCG...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACGAGAGCAGGTGGAAGTaGCGCAGGACGAACACCACA +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNESRWK*RRTNTT
Trigger: TGTGGTGTTCGTCCTGCGGCACTTCCACCTGCTCTC...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCCAGGGGTGATGTGCTaGCGGGCCCCAGATAGGAAC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHPGVMC*RAPDRN
Trigger: GTTCCTATCTGGGGCCCGGCAGCACATCACCCCTGG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTCTCCAGGGGTGATGTaGTGCCGGGCCCCAGATAGG +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHSPGVM*CRAPDR
Trigger: CCTATCTGGGGCCCGGCAGCACATCACCCCTGGAGA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTCATTGGGGTTACCGCTaGTCTCCAGGGGTGATGTGC +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERHWGYR*SPGVMC
Trigger: GCACATCACCCCTGGAGACCAGCGGTAACCCCAATG...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACCCTGCAGTGGCCACTTaGAATCTCCCATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNPAVAT*NLPWTG
Trigger: CCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGG...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGCAGGGCCAAGGACATaGGAAGATTCCACCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERAGPRT*EDSTQG
Trigger: TCCCTGGGTGGAATCTTCCCATGTCCTTGGCCCTGC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCTGTTCAGCCCCCATCTaGGCCTCGGGCTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVCSAPI*ASGFML
Trigger: CAACATGAAGCCCGAGGCCCAGATGGGGGCTGAACA...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGTTCTCATGGCAGAGTaGGCCAAAGTCCACTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAVLMAE*AKVHSP
Trigger: AGGAGAGTGGACTTTGGCTCACTCTGCCATGAGAAC...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGAGGCCCTCCCAAGTCTaGGCCCTGAGCCCTGGCACA +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQRPSQV*ALSPGT
Trigger: TGTGCCAGGGCTCAGGGCTCAGACTTGGGAGGGCCT...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGAAGAGGGGTCTAGGGTaGCAATGCCTCATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLKRGLG*QCLIPS
Trigger: GGAGGGGATGAGGCATTGTCACCCTAGACCCCTCTT...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCTCCGGCCGAGCAGCTaGGATCCCCGACGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSLRPSS*DPRRVA
Trigger: CGCGACCCGTCGGGGATCGCAGCTGCTCGGCCGGAG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTACGGACTCAGTGACATaGTCACTGCTGTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERTDSVT*SLLCSR
Trigger: GCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGT...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACGCTCTTTTCACACTCTaGCTCCACCACTGCCACGCT +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNALFTL*LHHCHA
Trigger: AGCGTGGCAGTGGTGGAGGCAGAGTGTGAAAAGAGC...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGAGCCCTGGCACACCTaGTCCCACCCTCCGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHEPWHT*SHPPPW
Trigger: CCAAGGCGGAGGGTGGGAGCAGGTGTGCCAGGGCTC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTCACTCCCAGACAAGATaGAGGAGCACACACCACACA +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAHSQTR*RSTHHT
Trigger: TGTGTGGTGTGTGCTCCTGCATCTTGTCTGGGAGTG...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGGGCCTGTTTCTGCCCTaGCCACCAGAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLGLFLP*PPELSK
Trigger: CTTTGAGAGCTCTGGTGGGCAGGGCAGAAACAGGCC...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAAACGGTGAGTGGGCATaGGGGAAGGTGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKNGEWA*GKVPHW
Trigger: CCAGTGAGGCACCTTCCCCCATGCCCACTCACCGTT...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTTACATGGCTACAATTTaGCGGAGGCTCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWAYMATI*RRLLEG
Trigger: GCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTA...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGCTGGGCTGGGCAGGATaGTGTCCTGTTCTCATGGCA +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLLGWAG*CPVLMA
Trigger: TGCCATGAGAACAGGACACCATCCTGCCCAGCCCAG...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGGGAGATGGCAGGGTTaGGGGATAGACTGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKGRWQG*GIDCSQ
Trigger: CTGGGAGCAGTCTATCCCCCAACCCTGCCATCTCCC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGAGCGGGGGTTCTCCTaGCACTGGGAAAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHERGFS*HWESSN
Trigger: GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCGGCAGCCTCCTCCTTaGTCCAGGCGCTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTRQPPP*SRRCSP
Trigger: CGGGCTACAGCGCCTGGATCAAGGAGGAGGCTGCCG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACAATGCAGCAGTGCTATaGGATCCCTCTTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNNAAVL*DPSWGL
Trigger: GAGACCCCAAGAGGGATCTCATAGCACTGCTGCATT...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGGAACCTCCAGATGTTaGCGAGGCCCACAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHGTSRC*RGPQRS
Trigger: GCTTCTCTGTGGGCCTCGGCAACATCTGGAGGTTCC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGAAGACCTGGGTAGCTaGCTCCCGCCACACCTGGGG +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHEDLGS*LPPHLG
Trigger: CCCCAGGTGTGGCGGGAGGCAGCTACCCAGGTCTTC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGAGGGTGATCAGGAGTaGCATGGCCCAGTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKEGDQE*HGPVGE
Trigger: TTCCCCAACTGGGCCATGGCACTCCTGATCACCCTC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGCTGAAGACCAGCCCTTaGCTTTGGCAGCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLLKTSP*LWQPLL
Trigger: CAGTAGAGGCTGCCAAAGGCAAGGGCTGGTCTTCAG...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCTCAGCTGCAGCCTTCTaGACAGGCTGGCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISSAAAF*TGWPPS
Trigger: GGATGGAGGCCAGCCTGTGCAGAAGGCTGCAGCTGA...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCGGTTGGGGGATAGACTaGTCCCAGGCTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISGWGID*SQAWGN
Trigger: GTTCCCCCAAGCCTGGGAGCAGTCTATCCCCCAACC...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACCGGCAAATGCAGCAGTaGTATGAGATCCCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNRQMQQ*YEIPLG
Trigger: CCCAAGAGGGATCTCATAGCACTGCTGCATTTGCCG...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAACCATCAGAGAGCAGGTaGAAGTGCCGCAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKPSESR*KCRRTN
Trigger: GTTCGTCCTGCGGCACTTCCACCTGCTCTCTGATGG...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGATAGGAACGGTGAGTaGGCATGGGGGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKDRNGE*AWGKVP
Trigger: AGGCACCTTCCCCCATGCCCACTCACCGTTCCTATC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCTTGGGCAAAGGGCCTaGCCTGGGCCTGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTLGQRA*PGPGGH
Trigger: GTGGCCACCAGGCCCAGGCCAGGCCCTTTGCCCAAG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCGAATCTCCCATGGACTaGGAAGCAGGCCTTATGGGT +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVESPMD*EAGLMG
Trigger: ACCCATAAGGCCTGCTTCCCAGTCCATGGGAGATTC...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTACTTGGAATCTCCCATaGACTGGGAAGCAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PSALEQVASWTRSNPVWATWNLP*TGKQAL
Trigger: TAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGT...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCGGTGTCCTGTTCTCATaGCAGAGTGAGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVGVLFS*QSEPKS
Trigger: GGACTTTGGCTCACTCTGCCATGAGAACAGGACACC...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGAAGGTGGTGAACACTaGGAGTCACAGATCAGCACG +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGREREGGEH*ESQIST
Trigger: CGTGCTGATCTGTGACTCCCAGTGTTCACCACCTTC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAGGGACTTGGGGACCTaGTCCTCTCCTGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISRDLGT*SSPATS
Trigger: GGAGGTAGCAGGAGAGGACCAGGTCCCCAAGTCCCT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGTTCCCTCTGCCTTCTaGTGGGCACTGTGTGGACAG +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHVPSAF*WALCGQ
Trigger: CTGTCCACACAGTGCCCACCAGAAGGCAGAGGGAAC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACGAAGTAGGTAGTGGCTaGGCTCTTTTCACACTCTGC +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNEVGSG*ALFTLC
Trigger: GCAGAGTGTGAAAAGAGCTCAGCCACTACCTACTTC...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAAGGGGAAGAGGGAGCTaGAATACATCACCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKRGRGS*NTSPSP
Trigger: CGGGGAAGGTGATGTATTTCAGCTCCCTCTTCCCCT...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACTCTTCAGGAAGGTGGTaGACACTGGGAGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: PTQADSERGFSWHWESSNSSGRW*TLGVTD
Trigger: ATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGA...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCGACCCCACCTGCCTTTaGCTCCAAAGGCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRADPTCL*LQRHQK
Trigger: CTTTTGATGCCTTTGGAGTCAAAGGCAGGTGGGGTC...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCATCTCAGGGCCTATTTaGAGGATCCAGGGATGCTCA +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVISGPI*RIQGCS
Trigger: TGAGCATCCCTGGATCCTTCAAATAGGCCCTGAGAT...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp TCTCCTGGCACTGGGAAAGCAGCAACCCCTGCACATGTATTGCTGGAGGGCAGAGTCATCGGGCCCCAGTaGAGCAGCAGACCTCACATC +
Preference number: 4 (lower is better)
Translates to: SPGTGKAATPAHVLLEGRVIGPQ*SSRPHI
Trigger: GATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGAC...TCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCCAAAGAGACAGACTATaGAGCTGGAGAAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVQRDRL*SWRSRC
Trigger: GCATCGGCTTCTCCAGCTGCATAGTCTGTCTCTTTG...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGCCAGGCCTGTGCCCTaGACGGACTTGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTARPVP*TDLSSS
Trigger: CGAGCTGGACAAGTCCGTGCAGGGCACAGGCCTGGC...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGGGGAGGCGGGGAAGTaGGTCATGGCCTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRGEAGK*VMASVK
Trigger: CTTCACTGAGGCCATGACGCACTTCCCCGCCTCCCC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAACCCCTGCACATGTATTaGTGGAGGGCAGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKPLHMY*WRAEAD
Trigger: GTCAGCTTCTGCCCTCCAGCAATACATGTGCAGGGG...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAATACTGCAGGCCTGTaGAGTGCCTGGGACCGTGTC +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISNTAGL*SAWDRV
Trigger: GACACGGTCCCAGGCACTGCACAGGCCTGCAGTATT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGCCTCCCGCCACACCTaGGGGTCCAGCATCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTASRHT*GSSILS
Trigger: GGACAAGATGCTGGACCCCCAGGTGTGGCGGGAGGC...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCATGGCACTGGCCACTGTaGGCCAGGAAGGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPWHWPL*ARKAWE
Trigger: TTCCCAAGCCTTCCTGGCCCACAGTGGCCAGTGCCA...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCCCCTGTGAAGGGACTTaGGGACCTGGTCCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVPCEGT*GPGPLL
Trigger: CAGGAGAGGACCAGGTCCCCAAGTCCCTTCACAGGG...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGCCACGCTCCCATTCCTaGCGACAGGACATTCACTCC +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQPRSHS*RQDIHS
Trigger: GGAGTGAATGTCCTGTCGTCAGGAATGGGAGCGTGG...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGCACAGCAGCCCACTGTaGACATCTCCTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQHSSPL*TSPWAP
Trigger: AGGTGCCCAAGGAGATGTTCACAGTGGGCTGCTGTG...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAAGAGAGGGAGGTGAGTaGCTCCTGCAGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPREGGE*LLQWPL
Trigger: AAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGGGCGTGGTGATGCCTaGCATGGTCCCGATCATGCT +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHGRGDA*HGPDHA
Trigger: AGCATGATCGGGACCATGGCAGGCATCACCACGCCC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTTACTGTCCACAGCACTaGCTATGGCACTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPYCPQH*LWHWPL
Trigger: CAGTGGCCAGTGCCATAGGCAGTGCTGTGGACAGTA...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTGCGTCAACGGCAAATaGAGCAGTGCTATGAGATCC +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRACVNGK*SSAMRS
Trigger: GGATCTCATAGCACTGCTGCATTTGCCGTTGACGCA...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGACCTGGTCCTCTCCTaGTACCTCCTGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRDLVLS*YLLLLQ
Trigger: CTGGAGGAGCAGGAGGTAGCAGGAGAGGACCAGGTC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCATTTCAGGCACATCCCTaGCCTGGAGTTCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPFQAHP*PGVPSA
Trigger: GGCAGAGGGAACTCCAGGGCAGGGATGTGCCTGAAA...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGAGGTGGGGAAGGTTCTaGTCCCGGTCACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRRWGRF*SRSLHS
Trigger: GGAGTGCAGTGACCGGGACCAGAACCTTCCCCACCT...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCGTTGCTAATTCTGCTTaGGATTTGGCAAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAVANSA*DLARGQ
Trigger: CTGGCCCCTTGCCAAATCCCAAGCAGAATTAGCAAC...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAACCAGGATTCTGGGGCTaGATCTTAGCTCATCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKPGFWG*ILAHQV
Trigger: CACCTGATGAGCTAAGATCCAGCCCCAGAATCCTGG...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTATTGCACACTATGGTaGGGGAGAGAGGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHYCTLW*GREEEG
Trigger: CCCCTCTTCCTCTCTCCCCCACCATAGTGTGCAATA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp GGAGAGAGGGAGGTGAGTGACTCCTGCAGTGGCCACTaGGAATCTCCCATGGACTGGGAAGCAGGCCTTATG +
Preference number: 4 (lower is better)
Translates to: GEREVSDSCSGH*ESPMDWEAGLM
Trigger: CATAAGGCCTGCTTCCCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTCCCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCGGCCACGGACTCAGTaGCATGCTCACTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTRPRTQ*HAHCCA
Trigger: AGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACGAGGGTGGCCAACACTaGCGTGAAGAAGTTGATGAA +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHEGGQH*REEVDE
Trigger: TTCATCAACTTCTTCACGTCAGTGTTGGCCACCCTC...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGCATCAAGAAGAACATaGCGGACCAGAACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVASRRT*RTRTGR
Trigger: CCTCCCCGTTCTGGTCCGTCATGTTCTTCTTGATGC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGTCTGAGCCACAAGAGTaGCTTGCGACCCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQSEPQE*LATLRE
Trigger: CTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGA...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp TCTCCTGGCACTGGGAAAGCAGCAACCCCTGCACATGTATTGCTGGAGGGCAGATGCCAGAACCCAAAGTaGCGGCCTGGTGTGTATGCT +
Preference number: 4 (lower is better)
Translates to: SPGTGKAATPAHVLLEGRCQNPK*RPGVYA
Trigger: AGCATACACACCAGGCCGTCACTTTGGGTTCTGGCA...TCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACCTTCTGCTTGCCGCCTaGCTCACCAGCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHLLLAA*LTSHIQ
Trigger: CTGAATGTGGCTGGTGAGGCAGGCGGCAAGCAGAAG...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTGAGGTGAGTGACTCCTaGAGTGGCCACTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPEVSDS*SGHLES
Trigger: AGATTCCAAGTGGCCACTGCAGGAGTCACTCACCTC...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTCACAGCCCTAAGAACTaGAGGTGGCAAGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPHSPKN*RWQVTG
Trigger: CCCTGTAACTTGCCACCTGCAGTTCTTAGGGCTGTG...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGTGTCTGCACATGATGTaGACACTGGGCGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQCLHMM*TLGGCA
Trigger: AGCACAGCCGCCCAGTGTGCACATCATGTGCAGACA...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCCACACTCACGTATGTaGACACCATACACACAGCAC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHPHSRM*TPYTQH
Trigger: GTGCTGTGTGTATGGTGTGCACATACGTGAGTGTGG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACAAACACTGTCAGGACTaGGTCAACGGCAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHKHCQD*VNGKCS
Trigger: GCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTT...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTCTGCTGTGCTCACGCTaGGTCACTTTGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPLLCSR*VTLLFF
Trigger: GAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAG...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGACGATGAGAGTGAGTaGCAGGGTGGCCGAGTAGTC +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRDDESE*QGGRVV
Trigger: GACTACTCGGCCACCCTGCCACTCACTCTCATCGTC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAACACGGAGAGGGTGTTaGAGCCATCAGAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPTRRGC*SHQRAG
Trigger: ACCTGCTCTCTGATGGCTCCAACACCCTCTCCGTGT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAACGTTCTCCTCCAGGTTaGAGATGTCCTTCATCATGC +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKRSPPG*RCPSSC
Trigger: GCATGATGAAGGACATCTCCAACCTGGAGGAGAACG...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGCAGGGCTTGGGCAGTaGTCACAGCTCCGACTCAGG +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSAGLGQ*SQLRLR
Trigger: CCTGAGTCGGAGCTGTGACCACTGCCCAAGCCCTGC...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAAAGGAGAGTGAGTGGTaGCTCAAAGGGGCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKKESEW*LKGAVK
Trigger: TTTCACTGCCCCTTTGAGCCACCACTCACTCTCCTT...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGAAAAAGCTCATCTCTTTaGGGAGATGTGGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LGAGSLLDQEQPRLGWAGKSSSL*GDVGLS
Trigger: AGAGAGACCCACATCTCCCCAAAGAGATGAGCTTTT...TCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAAGTAGAGTGTCTCTCCTaGGGCTCTGCTTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKVECLS*GSAFPV
Trigger: AACAGGAAAAGCAGAGCCCCAGGAGAGACACTCTAC...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCCCTGGTGTGTATGCTTaGGTCTGTATAAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAPGVYA*VCIKQS
Trigger: GCTCTGCTTTATACAGACCCAAGCATACACACCAGG...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCCCCAAAGTGACGGCCTaGTGTGTATGCTTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVPKVTA*CVCLGL
Trigger: CAGACCCAAGCATACACACCAGGCCGTCACTTTGGG...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTaGCGACCCTTCGTGAGGGTGTCCGGGTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSD*RPFVRVSGLST
Trigger: AGTGCTCAACCCGGACACCCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCCGTCAGCTCCTGCATaGACTTCTTGGTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHPSAPA*TSWFHK
Trigger: TTTATGGAACCAAGAAGTTCATGCAGGAGCTGACGG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGGATCAGGGGACTGTTaGCTCTTTCAGGCACATCCC +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHGSGDC*LFQAHP
Trigger: GGGATGTGCCTGAAAGAGTCAACAGTCCCCTGATCC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTCTCACTGGCATTAACTaGTGTGCCCTACCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPLTGIN*CALPVQ
Trigger: CTGAACAGGTAGGGCACATCAGTTAATGCCAGTGAG...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTGGACTTGAATTGTTCTaGACTTATGCCAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERGLELF*TYARTQ
Trigger: TTGGGTTCTGGCATAAGTTCAGAACAATTCAAGTCC...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCAACATGCTCACTGCTGTaGTCACGCTGGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPTCSLL*SRWVTL
Trigger: CAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGT...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCTCTGCCTCCACCACTaGCACGCTCCCATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSLCLHH*HAPIPD
Trigger: GTCAGGAATGGGAGCGTGGCAGTGGTGGAGGCAGAG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACAGATGTCCTTCATCATaGGGCCCTTCTTGTAGGACA +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHRCPSS*GPSCRT
Trigger: TGTCCTACAAGAAGGGCCGCATGATGAAGGACATCT...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTTCTCCTGCTACCTCCTaGTCCTCCAGGATTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTSPATS*SSRILG
Trigger: CCCCAGAATCCTGGAGGAGCAGGAGGTAGCAGGAGA...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCACAGAGAAGCCAATCTaGGCCAGGATGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVTEKPI*ARMYCS
Trigger: GCTGCAGTACATCCTGGCCCAGATTGGCTTCTCTGT...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTAAGGCAAAGAAGACCTaGGTAGCTGCCTCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTKAKKT*VAASRH
Trigger: GTGGCGGGAGGCAGCTACCCAGGTCTTCTTTGCCTT...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCAGACCCTCTCTTCTTaGGCAAAGGGCCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSQTLSS*AKGLAW
Trigger: CCAGGCCAGGCCCTTTGCCCAAGAAGAGAGGGTCTG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGAAGGTAATGGCAGGTaGGGTCGCTGTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVREGNGR*GRCCQL
Trigger: CAGCTGACAACAGCGACCCCACCTGCCATTACCTTC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACCTTTATTGCACACTATaGTGGGGGAGAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHLYCTL*WGREEE
Trigger: CTCTTCCTCTCTCCCCCACCATAGTGTGCAATAAAG...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp CCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTaGAAGGATCCAGGGATGCTCAGGGAGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PVKQQTSHLRAY*KDPGMLREPGS
Trigger: TGAACCTGGCTCCCTGAGCATCCCTGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGTGTCCAGCTTGGGAGTaGACATGTGTAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQCPAWE*TCVGCH
Trigger: ATGGCATCCTACACATGTTCACTCCCAAGCTGGACA...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGTCCTAAGAGCAATCTaGGCCACAAGAGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVVLRAI*ATRVTC
Trigger: GCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGAC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCATCTCCGTCAGCTCCTaGATGAACTTCTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISISVSS*MNFLVP
Trigger: TGGAACCAAGAAGTTCATGCAGGAGCTGACGGAGAT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTACTGTGGCCTGTTTCTaGCCTGCCCACCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSTVACF*PAHQSS
Trigger: AGAGCTCTGGTGGGCAGGGCAGAAACAGGCCACAGT...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAGCACACAGAGAAGATaGAATTCAGCTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRERGLQEGGEHWESQISSTQRR*NSAAVS
Trigger: GCTGACAGCAGCTGAATTCCATCTTCTCTGTGTGCT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCCCCACTCTCCGAGATaGAGTCAGAGATGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTPHSPR*SQRCPR
Trigger: CCTTGGACATCTCTGACTCCATCTCGGAGAGTGGGG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTACCTTCCCCGAGGACTaGATGCCCTTAACGACAGCC +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSTFPED*MPLTTA
Trigger: GGCTGTCGTTAAGGGCATCCAGTCCTCGGGGAAGGT...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGTGCCATGGCCCAGTTaGGGAAATACAGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTVPWPS*GNTGSA
Trigger: AGCGCTACCTGTATTTCCCCAACTGGGCCATGGCAC...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGGGAGGGCTAGATGAGTaGGGTCCTGAATTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQGGLDE*GPELGN
Trigger: GTTTCCTAATTCAGGACCCCACTCATCTAGCCCTCC...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGGTCAGGTTCCTCCCTaGCTGCACTCTGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSGQVPP*LHSENG
Trigger: CCCATTCTCAGAGTGCAGCCAGGGAGGAACCTGACC...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGGCAGACATTTACTCTTaGGTCAGGTTCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRADIYS*VRFLPG
Trigger: GCCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGC...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp GTGTCTGCACATGATGTGCACACTGGGCGGCTGTGCTaGTGTAATAAGGAGAGTGAGTGGTGGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VSAHDVHTGRLC*CNKESEWWLKG
Trigger: CCCTTTGAGCCACCACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGAGCTGGAGAAGGCAATaGCACCACCAAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAESWRRQ*HHQSPG
Trigger: GCCTGGGCTTTGGTGGTGTCATTGCCTTCTCCAGCT...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGCACGCTGGGTCACTTTaGTGTTCTTCGGCATTGATG +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRHAGSL*CSSALM
Trigger: CATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTG...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTCTGGAAACCTCTCCGTaGACTGTCCTTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTLETSP*TVLLSP
Trigger: TGGAGAGAGAAGGACAGTGCACGGAGAGGTTTCCAG...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCACAACAATTTGTGCTCTaGAAACCTCTCCGTGCACTG +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPQQFVL*KPLRAL
Trigger: CAGTGCACGGAGAGGTTTCCAGAGCACAAATTGTTG...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCATTCTGGCAAACCCAGTaGTGTGAAGGCAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPFWQTQ*CEGNES
Trigger: TGACTCATTGCCTTCACACCACTGGGTTTGCCAGAA...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGAGAACTTGGGGCTTCTaGCTAGGCCCTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAERTWGF*LGPPKS
Trigger: AGACTTGGGAGGGCCTAGGCAGAAGCCCCAAGTTCT...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAATGTGCTTCACCATTGTaGTCCAAACCATCTAATTTG +
Preference number: 4 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKCASPL*SKPSNL
Trigger: CAAATTAGATGGTTTGGAGCACAATGGTGAAGCACA...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGGGAGGGAGGGGAGTGTaGTTCACCATTGTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAEGGRGV*FTIVLQ
Trigger: TTGGAGCACAATGGTGAAGCACACTCCCCTCCCTCC...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGACGGCCTGGTGTGTATaGTTGGGTCTGTATAAAGCA +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRTAWCV*LGLYKA
Trigger: TGCTTTATACAGACCCAAGCATACACACCAGGCCGT...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp TCTCCTGGCACTGGGAAAGCAGCAACCCCTGCACATGTATTGCTGGAGGGCAGAGTTGTTCCAATTACATaGCTACAATTTGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPGTGKAATPAHVLLEGRVVPIT*LQFGGG
Trigger: GCCTCCGCCAAATTGTAGCCATGTAATTGGAACAAC...TCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTTCAGAAAACAGAACTTaGGGCTTCTGCCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTSENRT*GFCLGP
Trigger: AGGGCCTAGGCAGAAGCCCCAAGTTCTGTTTTCTGA...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACCAGAGCTCTCAAAGATaGAGCCAGTATTCCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NTQRRHSKRLQRALARPHQSSQR*SQYSLL
Trigger: AAGGAGGGAATACTGGCTCCATCTTTGAGAGCTCTG...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTCAGCTCTTTTCACAGTaGGGAGTACTCTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSQLFSQ*GVLWGS
Trigger: ACTCCCCCAGAGTACTCCCCACTGTGAAAAGAGCTG...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGTACCAAGGCTCATGCTaGAGCCAAGGGCAGCACATA +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAEYQGSC*SQGQHI
Trigger: TATGTGCTGCCCTTGGCTTCAGCATGAGCCTTGGTA...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGAAGATGGAATTCAGCTaGTGTCAGCTCCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQKMEFS*CQLLLI
Trigger: AATGAGAAGGAGCTGACAGCAGCTGAATTCCATCTT...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCACTAGTACTTTTCCTCTaGAGAAGAGCTAGCGATTCT +
Preference number: 4 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPLVLFL*RRASDS
Trigger: AGAATCGCTAGCTCTTCTCCAGAGGAAAAGTACTAG...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp AGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTaGGCGGAGGCTCTTGGAGGGCTAGATGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RPYGLFQLHGYN*AEALGGLDEWG
Trigger: ACCCCACTCATCTAGCCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CCAGGTCCTAAGAGCAATCTGAGCCACAAGAGTGACTTGCGACCCTTCGTGAGGTGGGACACATGGACTTaGATTGTTCTGAACTTATGC +
Preference number: 4 (lower is better)
Translates to: PGPKSNLSHKSDLRPFVRWDTWT*IVLNLC
Trigger: GCATAAGTTCAGAACAATTCAAGTCCATGTGTCCCA...CCTCACGAAGGGTCGCAAGTCACTCTTGTGGCTCAGATTGCTCTTAGGACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGCACACTGGGCGGCTGTaGTTGTGTAATAAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAEHTGRL*LCNKES
Trigger: ACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTG...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGTGCGGTGGGATGTTGTaGCCCAAAAGCTCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAECGGML*PKSSSL
Trigger: AAGAGATGAGCTTTTGGGGCACAACATCCCACCGCA...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGAACAGACACTTTATTaGACACTATGGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTEQTLY*TLWWGR
Trigger: TCTCCCCCACCATAGTGTGCAATAAAGTGTCTGTTC...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGGGAAGCAGGCCTTATaGGTTGTTCCAATTACATGG +
Preference number: 4 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSGKQAL*VVPITW
Trigger: CCATGTAATTGGAACAACCCATAAGGCCTGCTTCCC...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGAATAAGGAGAGTGAGTaGTGGCTCAAAGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAENKESE*WLKGAV
Trigger: CACTGCCCCTTTGAGCCACCACTCACTCTCCTTATT...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGAGATGCTCCACCCGATaGTCACATTATAATACAGCC +
Preference number: 4 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAERCSTR*SHYNTA
Trigger: GGCTGTATTATAATGTGATCATCGGGTGGAGCATCT...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGATGACCCACACAGGCTaGCTCGGAGCGGGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVMTHTG*LGAGVL
Trigger: GAGAACCCCCGCTCCGAGTCAGCCTGTGTGGGTCAT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
3UTR CAA 72 bp ATGCCAGAACCCAAAGTGACGGCCTGGTGTGTATGCTaGGGTCTGTATAAAGCAGAGCTTTCAATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: MPEPKVTAWCVC*GLYKAELSMRR
Trigger: TCTTCTCATTGAAAGCTCTGCTTTATACAGACCCAAGCATACACACCAGGCCGTCACTTTGGGTTCTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGAAGTTGACGTGGGGTaGGATGAGGTCCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVEVDVG*DEVPAQ
Trigger: CTGAGCCGGGACCTCATCCCACCCCACGTCAACTTC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGCAACCCCGTCTGGGCTaGGCAGGATGGTGTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVQPRLG*AGWCPV
Trigger: AACAGGACACCATCCTGCCCAGCCCAGACGGGGTTG...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGTCGCTGTTGTCAGCTaGAGCCTTCTGCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVVAVVS*SLLHRL
Trigger: CAGCCTGTGCAGAAGGCTGCAGCTGACAACAGCGAC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGGAAAGAGGCCAGGCCTaGACAAGTGGGCAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVERGQA*TSGQVE
Trigger: CTCAACCTGCCCACTTGTCCAGGCCTGGCCTCTTTC...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAAGCAGAGCTTTCAATaGGAAGAGGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVKQSFQ*EEALGP
Trigger: GGGGCCTAGGGCCTCTTCTCATTGAAAGCTCTGCTT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGTCTGGTCCCGGTCACTaGACTCCCAGACAAGATGCA +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVSGPGH*TPRQDA
Trigger: TGCATCTTGTCTGGGAGTGCAGTGACCGGGACCAGA...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGTCCCATAGCGTCCATTaGGGTTACCGCTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVSHSVH*GYRWSP
Trigger: TGGAGACCAGCGGTAACCCCAATGGACGCTATGGGA...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGATTAGGAAACAGAGCTaGTCCCAGCCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVIRKQS*SQPPAQ
Trigger: CTGAGCAGGAGGCTGGGAGCAGCTCTGTTTCCTAAT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR GCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAGGTTCCTCCCTGGCTaGACTCTGAGAATGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVRFLPG*TLRMGS
Trigger: AGAACCCATTCTCAGAGTGCAGCCAGGGAGGAACCT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGTCCTTTGTGGTCAGGTaGGAGAAGTTGACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVSFVVR*EKLTWG
Trigger: ACCCCACGTCAACTTCTCCCACCTGACCACAAAGGA...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGTGGGCCAGGAAGGCTTaGGAAAGGTTTCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVWARKA*ERFPRC
Trigger: ACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCA...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGCTCCTTCCCTGTTTCTaGCAAACCCAGTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVLLPCF*QTQWCE
Trigger: TTCACACCACTGGGTTTGCCAGAAACAGGGAAGGAG...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR TCA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAGTCATCGAACATGGTaGCAAAGTAGTTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVSHRTW*QSSFRS
Trigger: GCTCCGGAAACTACTTTGTCACCATGTTCGATGACT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp GGAGCTGCGCGCCGGCGCACGCGACTCCGCTCGCTCCTCACTCCCTaGCTCACCACCAGTCCCAACCTGGCTCCCGCCCGCCGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: GAARRRTRLRSLLTP*LTTSPNLAPARRAL
Trigger: GAGCGCGCGGCGGGCGGGAGCCAGGTTGGGACTGGTGGTGAGGCAGGGAGTGAGGAGCGAGCGGAGTCGCGTGCGCCGGCGCGCAGCTCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp GTGGGTAGTCGCGCAGACTCGGCCCGTGCACTCCGGCCGAGCAGCTaGGATCCCCGACGGGTCGCGGACGCACAGCTCCTCCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: VGSRADSARALRPSS*DPRRVADAQLLPRA
Trigger: GGCCCGGGGGAGGAGCTGTGCGTCCGCGACCCGTCGGGGATCGCAGCTGCTCGGCCGGAGTGCACGGGCCGAGTCTGCGCGACTACCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 90 bp GGACCCAGGTCCCACGGCGGAGAGAGCGCGCGGGATTGCGAAGACTaGGGCCGAGTGCCGCCCTCCCTGCGCCCTGGCAGCGCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: GPRSHGGESARDCED*GRVPPSLRPGSAGS
Trigger: AGAGCCGGCGCTGCCAGGGCGCAGGGAGGGCGGCACTCGGCCCCAGTCTTCGCAATCCCGCGCGCTCTCTCCGCCGTGGGACCTGGGTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp GAGGCGGGCAGGGCTTGGGCAGTGGTCACAGCTCCGACTCAGGGGTaGTGGCCAGCAGGTAGCCGCTCCCATAGCGTCCATTGGGGTTAC +
Preference number: 5 (lower is better)
Translates to: EAGRAWAVVTAPTQG*WPAGSRSHSVHWGY
Trigger: GTAACCCCAATGGACGCTATGGGAGCGGCTACCTGCTGGCCAGCACCCCTGAGTCGGAGCTGTGACCACTGCCCAAGCCCTGCCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CCCTCCGCCTTGGAGCAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTCAGGTGGGGTCGCTGTaGTCAGCTGCAGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PSALEQVASWTRSNPVWAQVGSL*SAAAFC
Trigger: GCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTG...AGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCCAAGGCGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGAGAGAGCGCGCGGGATaGCGAAGACTGGGGCCGAGT +
Preference number: 5 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLRERAG*RRLGPS
Trigger: ACTCGGCCCCAGTCTTCGCAATCCCGCGCGCTCTCT...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp CAGGCCGGCCGGTCCTCTGCATCCAGCTCCTCCTCCACCGCCTTCTaGTTGCCGCCTGCCTCACCAGCCACATTCAGTACACTCTGCTTA +
Preference number: 5 (lower is better)
Translates to: QAGRSSASSSSSTAF*LPPASPATFSTLCL
Trigger: TAAGCAGAGTGTACTGAATGTGGCTGGTGAGGCAGGCGGCAAGCAGAAGGCGGTGGAGGAGGAGCTGGATGCAGAGGACCGGCCGGCCTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp CACAGGGATGGGCAGCGTCGCCACGACGATGAGGGTGATCAGGAGTaGCATGGCCCAGTTGGGGAAATACAGGTAGCGCTCGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HRDGQRRHDDEGDQE*HGPVGEIQVALGSL
Trigger: GAGGCTGCCGAGCGCTACCTGTATTTCCCCAACTGGGCCATGGCACTCCTGATCACCCTCATCGTCGTGGCGACGCTGCCCATCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp GCTGCCGGGCCCCAGATAGGAACGGTGAGTGGGCATGGGGGAAGGTaGCTCACTGGGCACCTTGCTGAGGATGAAGCGGGTCTCATCGTT +
Preference number: 5 (lower is better)
Translates to: AAGPQIGTVSGHGGR*LTGHLAEDEAGLIV
Trigger: AACGATGAGACCCGCTTCATCCTCAGCAAGGTGCCCAGTGAGGCACCTTCCCCCATGCCCACTCACCGTTCCTATCTGGGGCCCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGGTGCCCTGCACGGACTaGTCCAGCTCGTCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLVPCTD*SSSSSR
Trigger: TCTGGAGGACGAGCTGGACAAGTCCGTGCAGGGCAC...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTAGAGGCGGGCAGGGCTaGGGCAGTGGTCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPRGGQG*GSGHSS
Trigger: GGAGCTGTGACCACTGCCCAAGCCCTGCCCGCCTCT...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp ACAGGCTCCTCGAGGGCCAGCAGGTCGGCCACGGACTCAGTGACATaGTCACTGCTGTGCTCACGCTGGGTCACTTTGCTGTTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: TGSSRASRSATDSVT*SLLCSRWVTLLFFG
Trigger: GCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCTGCTGGCCCTCGAGGAGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCTGGGGGTCCAGCATCTaGTCCAGCTTGGGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVWGSSI*SSLGVN
Trigger: GTTCACTCCCAAGCTGGACAAGATGCTGGACCCCCA...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CCCAGCCAAAGTCATCGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCAGGGAGATGGCAGGGTaGGGGGATAGACTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PSQSHRAPVKQQTSHLRAREMAG*GDRLLP
Trigger: TGGGAGCAGTCTATCCCCCAACCCTGCCATCTCCCT...GGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCGATGACTTTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 90 bp AGTCCACAGGCTCCTCGAGGGCCAGCAGGTCGGCCACGGACTCAGTaGCATGCTCACTGCTGTGCTCACGCTGGGTCACTTTGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SPQAPRGPAGRPRTQ*HAHCCAHAGSLCCS
Trigger: AGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCTGCTGGCCCTCGAGGAGCCTGTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 90 bp GCACAGCCAGGCTCCAGCTGTGTCCCAGTGTGGGGTGGAGCCTTCTaGGTGTGGGGTCATGAAGGACCCAGTCAGAAGCCAGAACGGAAT +
Preference number: 5 (lower is better)
Translates to: AQPGSSCVPVWGGAF*VWGHEGPSQKPERN
Trigger: ATTCCGTTCTGGCTTCTGACTGGGTCCTTCATGACCCCACACCCAGAAGGCTCCACCCCACACTGGGACACAGCTGGAGCCTGGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS-3UTR CAA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGTGCTGTTCTTCGGCATaGATGCCACCTGGGCCGTGT +
Preference number: 5 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLCCSSA*MPPGPC
Trigger: ACACGGCCCAGGTGGCATCAATGCCGAAGAACAGCA...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 90 bp CTCACTGCTGTGCTCACGCTGGGTCACTTTGCTGTTCTTCGGCATTaGTGCCACCTGGGCCGTGTAGCCCTGCTCCCCAGCACACAGAGA +
Preference number: 5 (lower is better)
Translates to: LTAVLTLGHFAVLRH*CHLGRVALLPSTQR
Trigger: TCTCTGTGTGCTGGGGAGCAGGGCTACACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp AGGGCCAGCAGGTCGGCCACGGACTCAGTGACATGCTCACTGCTGTaGTCACGCTGGGTCACTTTGCTGTTCTTCGGCATTGATGCCACC +
Preference number: 5 (lower is better)
Translates to: RASRSATDSVTCSLL*SRWVTLLFFGIDAT
Trigger: GGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCTGCTGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 90 bp AGGTCGGCCACGGACTCAGTGACATGCTCACTGCTGTGCTCACGCTaGGTCACTTTGCTGTTCTTCGGCATTGATGCCACCTGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: RSATDSVTCSLLCSR*VTLLFFGIDATWAV
Trigger: CACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTCCCGGCTCAGGACGTaGGTGTTAAGGTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHSRLRT*VLRYPR
Trigger: CCTAGGGTACCTTAACACCAACGTCCTGAGCCGGGA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGCCTCACTGGGCACCTaGCTGAGGATGAAGCGGGTC +
Preference number: 5 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVASLGT*LRMKRV
Trigger: GACCCGCTTCATCCTCAGCAAGGTGCCCAGTGAGGC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTACTGGGCGGCTGTGCTaGTGTAATAAGGAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERTGRLC*CNKESE
Trigger: CTCACTCTCCTTATTACACAAGCACAGCCGCCCAGT...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CAGGTAGCCTCTTGGACCAGGAGCAACCCCGTCTGGGCTGGGCAGGATGGTGTCGCTATGAGATCCCTCTaGGGGTCTCGCCATCTTAAG +
Preference number: 5 (lower is better)
Translates to: QVASWTRSNPVWAGQDGVAMRSL*GSRHLK
Trigger: CTTAAGATGGCGAGACCCCAAGAGGGATCTCATAGC...GACACCATCCTGCCCAGCCCAGACGGGGTTGCTCCTGGTCCAAGAGGCTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 90 bp CTCCTTGGGCACCTTGAAGGTGTCGATGATGGGCGTGGTGATGCCTaGCATGGTCCCGATCATGCTGCCCAGGCCCAGGTTGATAAGCAT +
Preference number: 5 (lower is better)
Translates to: LLGHLEGVDDGRGDA*HGPDHAAQAQVDKH
Trigger: ATGCTTATCAACCTGGGCCTGGGCAGCATGATCGGGACCATGGCAGGCATCACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331565.5
ENST00000465159.1
CDS CCA 90 bp CCAGGCTCCAGCTGTGTCCCAGTGTGGGGTGGAGCCTTCTGGGTGTaGGGTCATGAAGGACCCAGTCAGAAGCCAGAACGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: PGSSCVPVWGGAFWV*GHEGPSQKPERNCC
Trigger: ACAACAATTCCGTTCTGGCTTCTGACTGGGTCCTTCATGACCCCACACCCAGAAGGCTCCACCCCACACTGGGACACAGCTGGAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS-3UTR CAA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACAGCATCTTGTCCAGCTaGGGAGTGAACATGTGTAGG +
Preference number: 5 (lower is better)
Translates to: PTQADSERGFSWHWESSNSILSS*GVNMCR
Trigger: CCTACACATGTTCACTCCCAAGCTGGACAAGATGCT...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GCAGGCGGCCCTTTTCAAACACTGTCAGGACTGCGTCAACGGCAAATGCAGCAGGTCAGGTGGGAGAAGTaGACGTGGGGTGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: AGGPFQTLSGLRQRQMQQVRWEK*TWGGMR
Trigger: CCTCATCCCACCCCACGTCAACTTCTCCCACCTGAC...CTGCTGCATTTGCCGTTGACGCAGTCCTGACAGTGTTTGAAAAGGGCCGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CCCACACAGGCTGACTCGGAGCGGGGGTTCTCCTGGCACTGGGAAAGCAGCAACTCTCCATGTAGTCCTTaGTGGTCAGGTGGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: PTQADSERGFSWHWESSNSPCSP*WSGGRS
Trigger: ACTTCTCCCACCTGACCACAAAGGACTACATGGAGA...GTTGCTGCTTTCCCAGTGCCAGGAGAACCCCCGCTCCGAGTCAGCCTGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CATCTGGGCCTCGGGCTTCATGTTGCCTCAGTGAGGAGGGCGGAAGTCTCCCTGACTGTGAACATCTCCTaGGGCACCTTGAAGGTGTCG +
Preference number: 5 (lower is better)
Translates to: HLGLGLHVASVRRAEVSLTVNIS*GTLKVS
Trigger: CGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGT...CAGGGAGACTTCCGCCCTCCTCACTGAGGCAACATGAAGCCCGAGGCCCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTGTGGGCCAGGAAGGCTaGGGAAAGGTTTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPVGQEG*GKVSKV
Trigger: CACCTTGGAAACCTTTCCCAAGCCTTCCTGGCCCAC...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCAGCCACAAGAGTGACTaGCGACCCTTCGTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRERGLQEGGEHWESQISSHKSD*RPFVRV
Trigger: CACCCTCACGAAGGGTCGCAAGTCACTCTTGTGGCT...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 90 bp CAGCTGTGTCCCAGTGTGGGGTGGAGCCTTCTGGGTGTGGGGTCATaGAGGACCCAGTCAGAAGCCAGAACGGAATTGTTGTCCACAAGG +
Preference number: 5 (lower is better)
Translates to: QLCPSVGWSLLGVGS*RTQSEARTELLSTR
Trigger: CCTTGTGGACAACAATTCCGTTCTGGCTTCTGACTGGGTCCTTCATGACCCCACACCCAGAAGGCTCCACCCCACACTGGGACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS CCA 90 bp TGCCACCTGGGCCGTGTAGCCCTGCTCCCCAGCACACAGAGAAGATaGAATTCAGCTGCTGTCAGCTCCTTCTCATTCAGGGACCTGTCA +
Preference number: 5 (lower is better)
Translates to: CHLGRVALLPSTQRR*NSAAVSSFSFRDLS
Trigger: TGACAGGTCCCTGAATGAGAAGGAGCTGACAGCAGCTGAATTCCATCTTCTCTGTGTGCTGGGGAGCAGGGCTACACGGCCCAGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 90 bp TGTCCTTCATCATGCGGCCCTTCTTGTAGGACACGGAGAGGGTGTTaGAGCCATCAGAGAGCAGGTGGAAGTGCCGCAGGACGAACACCA +
Preference number: 5 (lower is better)
Translates to: CPSSCGPSCRTRRGC*SHQRAGGSAAGRTP
Trigger: TGGTGTTCGTCCTGCGGCACTTCCACCTGCTCTCTGATGGCTCCAACACCCTCTCCGTGTCCTACAAGAAGGGCCGCATGATGAAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCCTCAGAAAACAGAACTaGGGGCTTCTGCCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRERGLQEGGEHWESQISLRKQN*GLLPRP
Trigger: GGGCCTAGGCAGAAGCCCCAAGTTCTGTTTTCTGAG...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGAGGCTCCCAATAGAGCCAAGAGGAGGAGGAGGAGGCAGGGGGAGGGAGCGTCTAGGAACCAACAATTaGTGCTCTGGAAACCTCTCC +
Preference number: 5 (lower is better)
Translates to: LRLPIEPRGGGGGRGRERLGTNN*CSGNLS
Trigger: GGAGAGGTTTCCAGAGCACAAATTGTTGGTTCCTAG...ACGCTCCCTCCCCCTGCCTCCTCCTCCTCCTCTTGGCTCTATTGGGAGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAACATCTCAGGGCCTATTaGAAGGATCCAGGGATGCTC +
Preference number: 5 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKHLRAY*KDPGML
Trigger: GAGCATCCCTGGATCCTTCAAATAGGCCCTGAGATG...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGTAGGAGGTGTTGTCGGGTGAGGGGGACTGCGGTGGGATGTTGTGCCCCAAAATCACGCTGGGTCACTTaGCTGTTCTTCGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: GRRCCRVRGTAVGCCAPKSRWVT*LFFGID
Trigger: ATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGA...TTTTGGGGCACAACATCCCACCGCAGTCCCCCTCACCCGACAACACCTCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTTCATGATGTTGGCCTaGAAGCCCAGCACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHFMMLA*KPSTAN
Trigger: GTTTGCTGTGCTGGGCTTCAAGGCCAACATCATGAA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GCCCTGAAGGTAATGGCAGGTGGGGTCGCTGTTGTCAGCTGCAGCCTTCTGCACTCGTTCTCCTCCAGGTaGGAGATGTCCTTCATCATG +
Preference number: 5 (lower is better)
Translates to: ALKVMAGGVAVVSCSLLHSFSSR*EMSFIM
Trigger: CATGATGAAGGACATCTCCAACCTGGAGGAGAACGA...GTGCAGAAGGCTGCAGCTGACAACAGCGACCCCACCTGCCATTACCTTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGGAGCAGGTAGCCTCTaGGACCAGGAGCAACCCCGT +
Preference number: 5 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSGAGSL*DQEQPR
Trigger: ACGGGGTTGCTCCTGGTCCAAGAGGCTACCTGCTCC...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTGTGAGGGTGTCCGGGTaGAGCACTGTGGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTVRVSG*STVACF
Trigger: GAAACAGGCCACAGTGCTCAACCCGGACACCCTCAC...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 90 bp GTCAGAGATGTCCAAGGCCTCTCGGTACCAGAAGTAGGTAGTGGCTaGGCTCTTTTCACACTCTGCCTCCACCACTGCCACGCTCCCATT +
Preference number: 5 (lower is better)
Translates to: VRDVQGLSVPEVGSG*ALFTLCLHHCHAPI
Trigger: AATGGGAGCGTGGCAGTGGTGGAGGCAGAGTGTGAAAAGAGCTCAGCCACTACCTACTTCTGGTACCGAGAGGCCTTGGACATCTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGCACATGATGTGCACACTGGGCGGCTGTGCTTGTGTAATAAGGAGAGTGAGTGACCAGCCCTTGCCTTaGGCAGCCTCTACTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LHMMCTLGGCACVIRRVSDQPLP*AASTVH
Trigger: GTGGACAGTAGAGGCTGCCAAAGGCAAGGGCTGGTC...ACTCACTCTCCTTATTACACAAGCACAGCCGCCCAGTGTGCACATCATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CGGGCCCCAGTGAAGCAGCAGACCTCACATCTCAGGGCCTATTTGAAGGATCCATGCAGACATTTACTCTaGGGTCAGGTTCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: RAPVKQQTSHLRAYLKDPCRHLL*GQVPPW
Trigger: CCAGGGAGGAACCTGACCCAAGAGTAAATGTCTGCA...TGGATCCTTCAAATAGGCCCTGAGATGTGAGGTCTGCTGCTTCACTGGGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AACACACAGCGAAGACACAGCAAAAGGCTACAACGAGCACTAGCGCGCCCACACGACTGCGGTGGGATGTaGTGCCCCAAAAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: NTQRRHSKRLQRALARPHDCGGM*CPKSSS
Trigger: AGATGAGCTTTTGGGGCACAACATCCCACCGCAGTC...GTGTGGGCGCGCTAGTGCTCGTTGTAGCCTTTTGCTGTGTCTTCGCTGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 90 bp GATTTCCAAGTAGCTTTCTCTTCCTGGCTTGTGAGTGCTAATCACTaGGTGGCACAGCCAGGCTCCAGCTGTGTCCCAGTGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: DFQVAFSSWLVSANH*VAQPGSSCVPVWGG
Trigger: TCCACCCCACACTGGGACACAGCTGGAGCCTGGCTGTGCCACTCAGTGATTAGCACTCACAAGCCAGGAAGAGAAAGCTACTTGGAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS-3UTR CAA 90 bp GGGAGGGAGCGTGGTCTTCAGGAAGGTGGTGAACACTGGGAGTCACAGATCAGCTTCTCATTCATGATGTaGGCCTTGAAGCCCAGCACA +
Preference number: 5 (lower is better)
Translates to: GRERGLQEGGEHWESQISFSFMM*ALKPST
Trigger: TGTGCTGGGCTTCAAGGCCAACATCATGAATGAGAA...GCTGATCTGTGACTCCCAGTGTTCACCACCTTCCTGAAGACCACGCTCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp GGCCAGGAAGGCTTGGGAAAGGTTTCCAAGGTGTCTGCACATGATGTGCACACTATCTCCTTGGGCACCTaGAAGGTGTCGATGATGGGC +
Preference number: 5 (lower is better)
Translates to: GQEGLGKVSKVSAHDVHTISLGT*KVSMMG
Trigger: GCCCATCATCGACACCTTCAAGGTGCCCAAGGAGAT...AGTGTGCACATCATGTGCAGACACCTTGGAAACCTTTCCCAAGCCTTCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp TCTCCTGGCACTGGGAAAGCAGCAACCCCTGCACATGTATTGCTGGAGGGCAGAGCCTGGTGTGTATGCTaGGGTCTGTATAAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SPGTGKAATPAHVLLEGRAWCVC*GLYKAE
Trigger: CTCTGCTTTATACAGACCCAAGCATACACACCAGGC...TCTGCCCTCCAGCAATACATGTGCAGGGGTTGCTGCTTTCCCAGTGCCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CAAGGACATGGGAAGATTCCACCCAGGGACCAGGGCAGAGGAGGTTCCTCACCTAGAACAGACACTTTATaGCACACTATGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: QGHGKIPPRDQGRGGSSPRTDTL*HTMVGE
Trigger: CTCCCCCACCATAGTGTGCAATAAAGTGTCTGTTCT...AGGTGAGGAACCTCCTCTGCCCTGGTCCCTGGGTGGAATCTTCCCATGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCGAGTGTGCTTCACCATaGTGCTCCAAACCATCTAAT +
Preference number: 5 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVECASP*CSKPSN
Trigger: ATTAGATGGTTTGGAGCACAATGGTGAAGCACACTC...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 90 bp AATCCAGGCCACAGCGATGTTCTCAAGGATGACGATGAGAGTGAGTaGCAGGGTGGCCGAGTAGTCATCGAACATGGTGACAAAGTAGTT +
Preference number: 5 (lower is better)
Translates to: NPGHSDVLKDDDESE*QGGRVVIEHGDKVV
Trigger: AACTACTTTGTCACCATGTTCGATGACTACTCGGCCACCCTGCCACTCACTCTCATCGTCATCCTTGAGAACATCGCTGTGGCCTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGTTACATGGCTACAATTaGGCGGAGGCTCTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAELHGYN*AEALGG
Trigger: CCCTCCAAGAGCCTCCGCCAAATTGTAGCCATGTAA...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp CTGGGAAGCAGGCCTTATGGGTTGTTCCAATTACATGGCTACAATTTGGCGGAGCAAAAGCTCATCTCTTaGGGGAGATGTGGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LGSRPYGLFQLHGYNLAEQKLIS*GRCGSL
Trigger: GAGAGACCCACATCTCCCCAAAGAGATGAGCTTTTG...CTCCGCCAAATTGTAGCCATGTAATTGGAACAACCCATAAGGCCTGCTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AAGGAACTCAGGGGTAAAGGAGGGGACCCTGATTCTGGTCTGTCCCTCCAGGTCATGGGACACATGGACTaGAATTGTTCTGAACTTATG +
Preference number: 5 (lower is better)
Translates to: KELRGKGGDPDSGLSLQVMGHMD*NCSELM
Trigger: CATAAGTTCAGAACAATTCAAGTCCATGTGTCCCAT...GACCTGGAGGGACAGACCAGAATCAGGGTCCCCTCCTTTACCCCTGAGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGTCCTGCAGTGGCCACTaGGAATCTCCCATGGACTGG +
Preference number: 5 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVSCSGH*ESPMDW
Trigger: CCAGTCCATGGGAGATTCCAAGTGGCCACTGCAGGA...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS-3UTR CAA 90 bp AGTATAATATTGGGTTTGTCATTTAACAGCATTTACACCCACATGTACAGAGTGAATTCTGCTTGGGATTaGGCAAGGGGCCAGGTAGGA +
Preference number: 5 (lower is better)
Translates to: SIILGLSFNSIYTHMYRVNSAWD*ARGQVG
Trigger: TCCTACCTGGCCCCTTGCCAAATCCCAAGCAGAATT...CACTCTGTACATGTGGGTGTAAATGCTGTTAAATGACAAACCCAATATTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp CGCGCAGACTCGGCCCGTGCACTCCGGCCGAGCAGCTaGGATCCCCGACGGGTCGCGGACGCACAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: RADSARALRPSS*DPRRVADAQLL
Trigger: GAGGAGCTGTGCGTCCGCGACCCGTCGGGGATCGCAGCTGCTCGGCCGGAGTGCACGGGCCGAGTCTGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp TCCCACGGCGGAGAGAGCGCGCGGGATTGCGAAGACTaGGGCCGAGTGCCGCCCTCCCTGCGCCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: SHGGESARDCED*GRVPPSLRPGS
Trigger: GCTGCCAGGGCGCAGGGAGGGCGGCACTCGGCCCCAGTCTTCGCAATCCCGCGCGCTCTCTCCGCCGTGGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp CCCTGGCAGCGCCGGCTCTGCGGAGCAGAACGGAGCTaGGCGGAGCGCTGCGCGCACTGTTCCCTCGCTTTC +
Preference number: 6 (lower is better)
Translates to: PWQRRLCGAERS*AERCAHCSLAF
Trigger: GAAAGCGAGGGAACAGTGCGCGCAGCGCTCCGCCCAGCTCCGTTCTGCTCCGCAGAGCCGGCGCTGCCAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp CCCCCAGGCGGGGACATATATAGTGCCACACACCGATaGTGCCGCGGCGGATCCTCTGACCCACAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: PPGGDIYSATHR*CRGGSSDPQPA
Trigger: AGCTGGCTGTGGGTCAGAGGATCCGCCGCGGCAGCATCGGTGTGTGGCACTATATATGTCCCCGCCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp AGGGCTTGGGCAGTGGTCACAGCTCCGACTCAGGGGTaGTGGCCAGCAGGTAGCCGCTCCCATAGCGTCCAT +
Preference number: 6 (lower is better)
Translates to: RAWAVVTAPTQG*WPAGSRSHSVH
Trigger: ATGGACGCTATGGGAGCGGCTACCTGCTGGCCAGCACCCCTGAGTCGGAGCTGTGACCACTGCCCAAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp GTGATGTGCTGCCGGGCCCCAGATAGGAACGGTGAGTaGGCATGGGGGAAGGTGCCTCACTGGGCACCTTGC +
Preference number: 6 (lower is better)
Translates to: VMCCRAPDRNGE*AWGKVPHWAPC
Trigger: GCAAGGTGCCCAGTGAGGCACCTTCCCCCATGCCCACTCACCGTTCCTATCTGGGGCCCGGCAGCACATCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 72 bp GCTCCTCGAGGGCCAGCAGGTCGGCCACGGACTCAGTaGCATGCTCACTGCTGTGCTCACGCTGGGTCACTT +
Preference number: 6 (lower is better)
Translates to: APRGPAGRPRTQ*HAHCCAHAGSL
Trigger: AAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCTGCTGGCCCTCGAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp CCAGGCGGGGACATATATAGTGCCACACACCGATGCTaGCGCGGCGGATCCTCTGACCCACAGCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PGGDIYSATHRC*RGGSSDPQPAP
Trigger: TGGAGCTGGCTGTGGGTCAGAGGATCCGCCGCGGCAGCATCGGTGTGTGGCACTATATATGTCCCCGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp TGCTGGCCAGCAGGTAGCCGCTCCCATAGCGTCCATTaGGGTTACCGCTGGTCTCCAGGGGTGATGTGCTGC +
Preference number: 6 (lower is better)
Translates to: CWPAGSRSHSVH*GYRWSPGVMCC
Trigger: GCAGCACATCACCCCTGGAGACCAGCGGTAACCCCAATGGACGCTATGGGAGCGGCTACCTGCTGGCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 72 bp GTGCTCACGCTGGGTCACTTTGCTGTTCTTCGGCATTaGTGCCACCTGGGCCGTGTAGCCCTGCTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: VLTLGHFAVLRH*CHLGRVALLPS
Trigger: GCTGGGGAGCAGGGCTACACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp TCGAGGGCCAGCAGGTCGGCCACGGACTCAGTGACATaGTCACTGCTGTGCTCACGCTGGGTCACTTTGCTG +
Preference number: 6 (lower is better)
Translates to: SRASRSATDSVT*SLLCSRWVTLL
Trigger: CAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGTGGCCGACCTGCTGGCCCTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp GGGCAGCGTCGCCACGACGATGAGGGTGATCAGGAGTaGCATGGCCCAGTTGGGGAAATACAGGTAGCGCTC +
Preference number: 6 (lower is better)
Translates to: GQRRHDDEGDQE*HGPVGEIQVAL
Trigger: GAGCGCTACCTGTATTTCCCCAACTGGGCCATGGCACTCCTGATCACCCTCATCGTCGTGGCGACGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp GAGAGGGTGTTGGAGCCATCAGAGAGCAGGTGGAAGTaGCGCAGGACGAACACCACAGGGATGGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: ERVLEPSESRWK*RRTNTTGMGSV
Trigger: GACGCTGCCCATCCCTGTGGTGTTCGTCCTGCGGCACTTCCACCTGCTCTCTGATGGCTCCAACACCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp GACACGGAGAGGGTGTTGGAGCCATCAGAGAGCAGGTaGAAGTGCCGCAGGACGAACACCACAGGGATGGGC +
Preference number: 6 (lower is better)
Translates to: DTERVLEPSESR*KCRRTNTTGMG
Trigger: GCCCATCCCTGTGGTGTTCGTCCTGCGGCACTTCCACCTGCTCTCTGATGGCTCCAACACCCTCTCCGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 90 bp GCTCACTGCTGTGCTCACGCTGGGTCACTTTGCTGTTCTTCGGCATaGATGCCACCTGGGCCGTGTAGCCCTGCTCCCCAGCACACAGAG +
Preference number: 6 (lower is better)
Translates to: AHCCAHAGSLCCSSA*MPPGPCSPAPQHTE
Trigger: CTCTGTGTGCTGGGGAGCAGGGCTACACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp GCAAAGAAGACCTGGGTAGCTGCCTCCCGCCACACCTaGGGGTCCAGCATCTTGTCCAGCTTGGGAGTGAAC +
Preference number: 6 (lower is better)
Translates to: AKKTWVAASRHT*GSSILSSLGVN
Trigger: GTTCACTCCCAAGCTGGACAAGATGCTGGACCCCCAGGTGTGGCGGGAGGCAGCTACCCAGGTCTTCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp TGTGCTCACGCTGGGTCACTTTGCTGTTCTTCGGCATaGATGCCACCTGGGCCGTGTAGCCCTGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: CAHAGSLCCSSA*MPPGPCSPAPQ
Trigger: CTGGGGAGCAGGGCTACACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 90 bp CATGGGGGCAGGGAGGAGTTACCTGTGAACATCTCCTTGGGCACCTaGAAGGTGTCGATGATGGGCGTGGTGATGCCTGCCATGGTCCCG +
Preference number: 6 (lower is better)
Translates to: HGGREELPVNISLGT*KVSMMGVVMPAMVP
Trigger: CGGGACCATGGCAGGCATCACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGGTAACTCCTCCCTGCCCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS CCA 72 bp TCATGCGGCCCTTCTTGTAGGACACGGAGAGGGTGTTaGAGCCATCAGAGAGCAGGTGGAAGTGCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SCGPSCRTRRGC*SHQRAGGSAAG
Trigger: TCCTGCGGCACTTCCACCTGCTCTCTGATGGCTCCAACACCCTCTCCGTGTCCTACAAGAAGGGCCGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp GTGACATGCTCACTGCTGTGCTCACGCTGGGTCACTTaGCTGTTCTTCGGCATTGATGCCACCTGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: VTCSLLCSRWVT*LFFGIDATWAV
Trigger: CACGGCCCAGGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp CATGGGGGCAGGGAGGAGTTACCTGTGAACATCTCCTaGGGCACCTTGAAGGTGTCGATGATGGGCGTGGTG +
Preference number: 6 (lower is better)
Translates to: HGGREELPVNIS*GTLKVSMMGVV
Trigger: CACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGGTAACTCCTCCCTGCCCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS CAA 90 bp AATGCAAAGACACAGCAGCCCACTGTGAACATCTCCTTGGGCACCTaGAAGGTGTCGATGATGGGCGTGGTGATGCCTGCCATGGTCCCG +
Preference number: 6 (lower is better)
Translates to: NAKTQQPTVNISLGT*KVSMMGVVMPAMVP
Trigger: CGGGACCATGGCAGGCATCACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGTGGGCTGCTGTGTCTTTGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS TCA 72 bp GTCCAAGGCCTCTCGGTACCAGAAGTAGGTAGTGGCTaGGCTCTTTTCACACTCTGCCTCCACCACTGCCAC +
Preference number: 6 (lower is better)
Translates to: VQGLSVPEVGSG*ALFTLCLHHCH
Trigger: GTGGCAGTGGTGGAGGCAGAGTGTGAAAAGAGCTCAGCCACTACCTACTTCTGGTACCGAGAGGCCTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp AGGGAGGAGTTACCTGTGAACATCTCCTTGGGCACCTaGAAGGTGTCGATGATGGGCGTGGTGATGCCTGCC +
Preference number: 6 (lower is better)
Translates to: REELPVNISLGT*KVSMMGVVMPA
Trigger: GGCAGGCATCACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGGTAACTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS TCA 72 bp GTAGCTTTCTCTTCCTGGCTTGTGAGTGCTAATCACTaGGTGGCACAGCCAGGCTCCAGCTGTGTCCCAGTG +
Preference number: 6 (lower is better)
Translates to: VAFSSWLVSANH*VAQPGSSCVPV
Trigger: CACTGGGACACAGCTGGAGCCTGGCTGTGCCACTCAGTGATTAGCACTCACAAGCCAGGAAGAGAAAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465159.1
CDS GCA 72 bp CCTGCTCCCCAGCACACAGAGAAGATGGAATTCAGCTaGTGTCAGCTCCTTCTCATTCAGGGACCTGTCACG +
Preference number: 6 (lower is better)
Translates to: PAPQHTEKMEFS*CQLLLIQGPVT
Trigger: CGTGACAGGTCCCTGAATGAGAAGGAGCTGACAGCAGCTGAATTCCATCTTCTCTGTGTGCTGGGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS GCA 72 bp CATCGTTCTCCTCCAGGTTGGAGATGTCCTTCATCATaGGGCCCTTCTTGTAGGACACGGAGAGGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: HRSPPGWRCPSS*GPSCRTRRGCW
Trigger: CCAACACCCTCTCCGTGTCCTACAAGAAGGGCCGCATGATGAAGGACATCTCCAACCTGGAGGAGAACGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp ACGGACTCAGTGACATGCTCACTGCTGTGCTCACGCTaGGTCACTTTGCTGTTCTTCGGCATTGATGCCACC +
Preference number: 6 (lower is better)
Translates to: TDSVTCSLLCSR*VTLLFFGIDAT
Trigger: GGTGGCATCAATGCCGAAGAACAGCAAAGTGACCCAGCGTGAGCACAGCAGTGAGCATGTCACTGAGTCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 90 bp TGGGAGAAGTTGACGTGGGGTGGGATGAGGTCCCGGCTCAGGACGTaGGTGTTAAGGTACCCTAGGATTTTCTCAGCATTCTCGACCACA +
Preference number: 6 (lower is better)
Translates to: WEKLTWGGMRSRLRT*VLRYPRIFSAFSTT
Trigger: TGTGGTCGAGAATGCTGAGAAAATCCTAGGGTACCTTAACACCAACGTCCTGAGCCGGGACCTCATCCCACCCCACGTCAACTTCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CCA 72 bp CACAGCGATGTTCTCAAGGATGACGATGAGAGTGAGTaGCAGGGTGGCCGAGTAGTCATCGAACATGGTGAC +
Preference number: 6 (lower is better)
Translates to: HSDVLKDDDESE*QGGRVVIEHGD
Trigger: GTCACCATGTTCGATGACTACTCGGCCACCCTGCCACTCACTCTCATCGTCATCCTTGAGAACATCGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp TTGACGTGGGGTGGGATGAGGTCCCGGCTCAGGACGTaGGTGTTAAGGTACCCTAGGATTTTCTCAGCATTC +
Preference number: 6 (lower is better)
Translates to: LTWGGMRSRLRT*VLRYPRIFSAF
Trigger: GAATGCTGAGAAAATCCTAGGGTACCTTAACACCAACGTCCTGAGCCGGGACCTCATCCCACCCCACGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331565.5
CDS CAA 72 bp AATGCAAAGACACAGCAGCCCACTGTGAACATCTCCTaGGGCACCTTGAAGGTGTCGATGATGGGCGTGGTG +
Preference number: 6 (lower is better)
Translates to: NAKTQQPTVNIS*GTLKVSMMGVV
Trigger: CACCACGCCCATCATCGACACCTTCAAGGTGCCCAAGGAGATGTTCACAGTGGGCTGCTGTGTCTTTGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331565.5