RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A16 (Homo sapiens)

Ensembl gene IDs: ENSG00000063127

Ensembl transcript IDs: ENST00000335875.9, ENST00000454748.7, ENST00000594180.1, ENST00000594917.1, ENST00000597969.5, ENST00000598221.1, ENST00000598828.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCTGTGGAGGGGAAGGATaGGTGGGGAACCAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: PAPFQETGTPEVAGLVDICGGEG*VGNQSR
Trigger: TCTGCTTTGGTTCCCCACCCATCCTTCCCCTCCACA...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR CAA 90 bp CTTAGGGGTAGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTaGGGCCTGAAGGGAATCCTATGTATGCGGCAGTATACAAAGTAT +
Preference number: 2 (lower is better)
Translates to: LRGRDVEAVIGPSPL*GLKGILCMRQYTKY
Trigger: ATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR-3UTR TCA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGCAAGTCCAGGCCCCATaGACACCCCCAAAGAATGCC +
Preference number: 2 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVQVQAP*TPPKNA
Trigger: GGCATTCTTTGGGGGTGTTCATGGGGCCTGGACTTG...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR CCA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGGGTCACCAGGTAAGATaGGACCCAGGAAGGGATTGC +
Preference number: 2 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVGHQVR*DPGRDC
Trigger: GCAATCCCTTCCTGGGTCCCATCTTACCTGGTGACC...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR TCA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTACAAGTCCAGGCCCCATaGACACCCCCAAAGAATGCC +
Preference number: 2 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVQVQAP*TPPKNA
Trigger: GGCATTCTTTGGGGGTGTTCATGGGGCCTGGACTTG...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR-3UTR CCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTTGACTGTGGAGAGATaGGAAAAGGGTTCAGAATAT +
Preference number: 2 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLLTVER*EKGSEY
Trigger: ATATTCTGAACCCTTTTCCCATCTCTCCACAGTCAA...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR-3UTR TCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGAGTCACATTACAAGTTaGTGGGTACTTTGTTTCATC +
Preference number: 2 (lower is better)
Translates to: PPLGNKSGSGSREINSCKSHITS*WVLCFI
Trigger: GATGAAACAAAGTACCCATCAACTTGTAATGTGACT...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR-3UTR GCA 90 bp AAGAATAGACAACTATGCCCCAACAATCTAACTCATATCCCAGAAAAATGTGCAAGTACATCAGGAACATaGATAAGAATGTTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: KNRQLCPNNLTHIPEKCASTSGT*IRMFAA
Trigger: TGCTGCAAACATTCTTATGCATGTTCCTGATGTACT...TGCACATTTTTCTGGGATATGAGTTAGATTGTTGGGGCATAGTTGTCTATTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594180.1
3UTR-3UTR CAA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTCAGGGAGATCAACAGTaGCAAGCTGATATTAAGAGT +
Preference number: 3 (lower is better)
Translates to: APFQETGTPEVAGLVDITQGDQQ*QADIKS
Trigger: ACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTG...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR CAA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTATTCACCAACAGCATaGCTCCTCCAGCTCCATTCC +
Preference number: 3 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLYSPTA*LLQLHS
Trigger: GGAATGGAGCTGGAGGAGCAATGCTGTTGGTGAATA...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR CAA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGGTCGAAGCACCTCTTTaGACTGTGGAGAGATGGGAA +
Preference number: 3 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVVEAPL*TVERWE
Trigger: TTCCCATCTCTCCACAGTCAAAAGAGGTGCTTCGAC...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR TCA 72 bp ATCTGCTTACATCCAGTCCTTGGAGTTCCAGTAGACTaGTTTATTCACCAACAGCATTGCTCCTCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: ICLHPVLGVPVD*FIHQQHCSSSS
Trigger: GGAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGTAAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
3UTR-3UTR CAA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGAGAATGCCCCTCCTCTaGGAAATAAAAGTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: PPLGNKSGSGSREINSCKRMPLL*EIKVVL
Trigger: CAGAACCACTTTTATTTCCAAGAGGAGGGGCATTCT...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR CAA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCAGAATGCCCCTCCTCTaGGAAATAAAAGTGGTTCTG +
Preference number: 3 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCRMPLL*EIKVVL
Trigger: CAGAACCACTTTTATTTCCAAGAGGAGGGGCATTCT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR-3UTR CAA 90 bp TGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCAGGGAGATCAACAGTaGCAAGCTGATATTAAGAGT +
Preference number: 3 (lower is better)
Translates to: WIQGDQQLQADIKSCLLDQGDQQ*QADIKS
Trigger: ACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTG...ATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
3UTR GCA 72 bp TTCCAGAGTGATTTGTTACCCAAGAATAGACAACTATaGCCCAACAATCTAACTCATATCCCAGAAAAATGT +
Preference number: 3 (lower is better)
Translates to: FQSDLLPKNRQL*PNNLTHIPEKC
Trigger: ACATTTTTCTGGGATATGAGTTAGATTGTTGGGGCATAGTTGTCTATTCTTGGGTAACAAATCACTCTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594180.1
CDS-3UTR CCA 90 bp CTTAGGGGTAGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTTGGGCCTGCGGGCTGCTGAAACTTaGGCCTCTGAGGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LRGRDVEAVIGPSPLLGLRAAET*ASEVQD
Trigger: ATCTTGGACCTCAGAGGCCCAAGTTTCAGCAGCCCG...CAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCGCTGGGGAAGGCCACTaGGCCAGGCATTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: PAPFQETGTPEVAGLVDIAGEGH*ARHCRW
Trigger: CCATCTACAATGCCTGGCTCAGTGGCCTTCCCCAGC...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCTGCCACCCTGACGCATaGTCTGACCAGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PAPFQETGTPEVAGLVDICHPDA*SDQLPS
Trigger: AGATGGCAGCTGGTCAGAGCATGCGTCAGGGTGGCA...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTCAGGATCGTCAGGTCTaGAAGGAACCTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITQDRQV*KEPPGP
Trigger: GGGGCCAGGAGGTTCCTTGCAGACCTGACGATCCTG...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACGGGGGAGGCTCACGGTaGTTGAGTCCCAGGACATGT +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHGGGSR*LSPRTC
Trigger: ACATGTCCTGGGACTCAAGCACCGTGAGCCTCCCCC...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACTGCAAGGAACCTCCTaGCCCCATAGGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRLQGTS*PHRPRI
Trigger: TATCCTGGGCCTATGGGGCCAGGAGGTTCCTTGCAG...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CATAGGCCCGTCTCCGCTCTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTAATGGGAGAGATGGGGTaGCCCAACAGGATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: HRPVSALGPEGNPMYAAVMGEMG*PNRIVR
Trigger: CCTGACGATCCTGTTGGGCCACCCCATCTCTCCCAT...TACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp CATAGGCCCGTCTCCGCTCTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTACACTGTGCCAGTCCATaGGGTGTTTGCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HRPVSALGPEGNPMYAAVHCASP*GVCQQG
Trigger: TCCTTGCTGGCAAACACCTCATGGACTGGCACAGTG...TACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGAGGTTGTAAAGCAGGTTaGCAGGGGGCTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRGCKAG*QGAWHQ
Trigger: CTGATGCCAAGCCCCCTGTCAACCTGCTTTACAACC...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCCTGGGTGTTAGCTGGTaGCTTAGGGGTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: PAPFQETGTPEVAGLVDILGVSW*LRGRDV
Trigger: CACATCCCTACCCCTAAGTCACCAGCTAACACCCAG...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGAGGCTCACGGTGCTTaGGTCCCAGGACATGTAGGT +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITEAHGA*VPGHVG
Trigger: ACCTACATGTCCTGGGACTCAAGCACCGTGAGCCTC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR CAA 72 bp AGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTaGGGCCTGAAGGGAATCCTATGTATGCGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RDVEAVIGPSPL*GLKGILCMRQY
Trigger: ATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACATCCTCGATTCTGTCTaGGGCCTTCAAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHILDSV*GLQGLL
Trigger: CAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGAT...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTAGGGGTAGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTTGGGCCTGTCATGGTCACAAAGATaGTTAGCAGCACAACTGGAC +
Preference number: 4 (lower is better)
Translates to: LRGRDVEAVIGPSPLLGLSWSQR*LAAQLD
Trigger: GTCCAGTTGTGCTGCTAATCATCTTTGTGACCATGA...CAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR GCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGATCTTCCATACACCCATaGCACCCTGACGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRSSIHP*HPDACS
Trigger: AGAGCATGCGTCAGGGTGGCATGGGTGTATGGAAGA...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTCTGCATAATCCCTATTaGGCTGCTCAGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITLHNPY*AAQPHG
Trigger: GCCATGGGGCTGAGCAGCGCAATAGGGATTATGCAG...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGATCATCAAGAGCAGTaGCCACGGTGGGTATGGTCG +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITDHQEQ*PRWVWS
Trigger: CGACCATACCCACCGTGGGCACTGCTCTTGATGATC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACCGAGAAAGGCATCACTaGGACAGTTGTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHRERHH*DSCWTG
Trigger: CCCAGTCCAACAACTGTCTCAGTGATGCCTTTCTCG...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ATCAAGAGCAGTGCCCACGGTGGGTATGGTCGAAGCACCTCTTTTGACTGTGGAGGAGAACCATGCTTTTaGTGTGCTGGGGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IKSSAHGGYGRSTSFDCGGEPCF*CAGEGH
Trigger: GTGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCC...TCCACAGTCAAAAGAGGTGCTTCGACCATACCCACCGTGGGCACTGCTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTAGGGGTAGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTTGGGCCTGCTAGCCTTAAGAAACTaGGTCTCTATGTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: LRGRDVEAVIGPSPLLGLLALRN*VSMLHS
Trigger: TGAGTGCAACATAGAGACTCAGTTTCTTAAGGCTAG...CAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGGCCGCACACGAACATaGGCAAAAAGACTCCCACTA +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITGRTRT*AKRLPL
Trigger: TAGTGGGAGTCTTTTTGCTCATGTTCGTGTGCGGCC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CATAGGCCCGTCTCCGCTCTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTAGAGGCCTTCAAGGCCTaGTGGTACCAGAAGTATATG +
Preference number: 4 (lower is better)
Translates to: HRPVSALGPEGNPMYAAVEAFKA*WYQKYM
Trigger: CATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTC...TACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTCATGCGTGGGTTTCTaGTTCAGGGCTGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHSCVGF*FRAEAV
Trigger: AACTGCCTCAGCCCTGAACCAGAAACCCACGCATGA...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTATGCTTTTGATGTGCTaGGGAAGGCCACTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITMLLMC*GRPLSQ
Trigger: CTGGCTCAGTGGCCTTCCCCAGCACATCAAAAGCAT...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGAGAAGGTGTCCTGGAGTaGAGTAATGATGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGREGVLE*SNDALH
Trigger: ATGCAGGGCATCATTACTCCACTCCAGGACACCTTC...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACACAACTGGACACAGATaGGGCCACAGCCAACCAAAG +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHTTGHR*GHSQPK
Trigger: CTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTGT...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGCAGACTGTAGACTGGTaGCCCGCCATCCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWQTVDW*PAILDS
Trigger: AGAATCGAGGATGGCGGGTCACCAGTCTACAGTCTG...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACGATGAAGTAGCTGCCTaGAGGTCGAGTGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHDEVAA*RSSEEE
Trigger: CTCTTCTTCACTCGACCTTCAGGCAGCTACTTCATC...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGAATACGACAACGACGATaGTGGGGAAGACTATCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRIRQRR*WGRLSS
Trigger: ACTGGATAGTCTTCCCCATCATCGTCGTTGTCGTAT...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACGGATGGGGAAAACAATaGTGGTGGTCACCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHGWGKQ*WWSPGK
Trigger: CTTACCTGGTGACCACCATCATTGTTTTCCCCATCC...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp ATCAAGAGCAGTGCCCACGGTGGGTATGGTCGAAGCACCTCTTTTGACTGTGGAACCATGCTTTTGATGTaGTGGGGAAGGCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: IKSSAHGGYGRSTSFDCGTMLLM*WGRPLS
Trigger: GCTCAGTGGCCTTCCCCAGCACATCAAAAGCATGGT...TCCACAGTCAAAAGAGGTGCTTCGACCATACCCACCGTGGGCACTGCTCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR GCA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGCTGCATAATCCCTATTaGGCTGCTCAGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWLHNPY*AAQPHG
Trigger: GCCATGGGGCTGAGCAGCGCAATAGGGATTATGCAG...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATGGGGAGGATGCTCACACAGACTCTCTaGGGCAGCTCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KGILCMRQYTKYAGMGRMLTQTL*GSSRFC
Trigger: GCAGAAGCGGGAGCTGCCCCAGAGAGTCTGTGTGAG...CATCCTCCCCATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACAAGGATGTCGAAGGCTaGGCCTCTGTCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHKDVEG*ASVFIS
Trigger: TGAGATGAAGACAGAGGCCCAGCCTTCGACATCCTT...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGGGACATTTCTCCCATaGAACGGGAAACTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITGTFLP*NGKLEG
Trigger: TCCTTCCAGTTTCCCGTTCCATGGGAGAAATGTCCC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGAAGGTGTCCTGGAGTaGAGTAATGATGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITEGVLE*SNDALH
Trigger: ATGCAGGGCATCATTACTCCACTCCAGGACACCTTC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGGCTGGGGAAGGCCACTaGGCCAGGCATTGTAGATGG +
Preference number: 4 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLAGEGH*ARHCRW
Trigger: CCATCTACAATGCCTGGCTCAGTGGCCTTCCCCAGC...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATCAAGTCCAGGCCCCATaGACACCCCCAAAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LGPEGNPMYAAVYKVCRDQVQAP*TPPKNA
Trigger: GGCATTCTTTGGGGGTGTTCATGGGGCCTGGACTTG...ATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR GCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCGGCAGCTCCCGCTTCTaGAAGGGAGGGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLGSSRF*KGGFIF
Trigger: GAAGATGAACCCTCCCTTGCAGAAGCGGGAGCTGCC...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR GCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTTTCTTCTCTGTCATCTaGACCTTCTCATGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITFFSVI*TFSCVG
Trigger: ACCCACGCATGAGAAGGTGCAGATGACAGAGAAGAA...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCTGCCACCCTGACGCATaGTCTGACCAGCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLCHPDA*SDQLPS
Trigger: AGATGGCAGCTGGTCAGAGCATGCGTCAGGGTGGCA...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR GCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGCAGTATACAAAGTATaGAGGGATGGGGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITAVYKV*RDGEDD
Trigger: GTCATCCTCCCCATCCCTGCATACTTTGTATACTGC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTCCACGTTTGACTTCCTaGGACACTGTCAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITPRLTS*DTVRNH
Trigger: GTGATTTCTGACAGTGTCCCAGGAAGTCAAACGTGG...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACATACAGAAATTTGCTTaGGCTGACTGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHIQKFA*ADWSWP
Trigger: AGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTAT...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCAGTGCCCACGGTGGGTATGGTCGAAGCACCTCTTTTGACTGTGGAGAGATGTATACTCAGTTTTGCTaGACCAGAACGGACGGGCAA +
Preference number: 4 (lower is better)
Translates to: SSAHGGYGRSTSFDCGEMYTQFC*TRTDGQ
Trigger: TTGCCCGTCCGTTCTGGTCCAGCAAAACTGAGTATA...CATCTCTCCACAGTCAAAAGAGGTGCTTCGACCATACCCACCGTGGGCACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACAAAGAGAAGGTGTCCTaGAGTGGAGTAATGATGCCC +
Preference number: 4 (lower is better)
Translates to: SSIPGDRHPRSSRTGRHHKEKVS*SGVMMP
Trigger: GGGCATCATTACTCCACTCCAGGACACCTTCTCTTT...GTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACCCAGGATACAGCCATaGTTTCAAATACGACAACGA +
Preference number: 4 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRPRIQP*FQIRQR
Trigger: TCGTTGTCGTATTTGAAACCATGGCTGTATCCTGGG...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAGGGATGTGGCAAAGATGGGAGAGATaGGGTGGCCCAACAGGATCG +
Preference number: 4 (lower is better)
Translates to: PFEPLYWVLAGDLGVGMWQRWER*GGPTGS
Trigger: CGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTG...CCACATCCCTACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGGAGCAGTGCCCACGGTaGGTATGGTCGAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVEQCPR*VWSKHL
Trigger: GAGGTGCTTCGACCATACCCACCGTGGGCACTGCTC...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGGCAACCACCAACTGTTaGAGGCCAAATTTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWATTNC*RPNFAP
Trigger: AGGGGCAAAATTTGGCCTTCAACAGTTGGTGGTTGC...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp AAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATGGGGAGGATGCTCCGCTCTTGGGCCTaGAGGGAATCCTATGTATGC +
Preference number: 4 (lower is better)
Translates to: KGILCMRQYTKYAGMGRMLRSWA*RESYVC
Trigger: GCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAG...CATCCTCCCCATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp CCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAGGGATGTGGTCACCCAGAGTGAATTaGAAGGTCTGGCCCCTACTC +
Preference number: 4 (lower is better)
Translates to: PFEPLYWVLAGDLGVGMWSPRVN*KVWPLL
Trigger: GAGTAGGGGCCAGACCTTTCAATTCACTCTGGGTGA...CCACATCCCTACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR GCA 90 bp ACATCCAGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCAGGATCGTCAGGTCTaGAAGGAACCTCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TSSPWSSSRLIYSPTALLQDRQV*KEPPGP
Trigger: GGGGCCAGGAGGTTCCTTGCAGACCTGACGATCCTG...GAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR GCA 90 bp AAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATGGGGAGGATGGACCCAGGAAGGGATTaGAAGTCCAGGCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: KGILCMRQYTKYAGMGRMDPGRD*KSRPHE
Trigger: TTCATGGGGCCTGGACTTGCAATCCCTTCCTGGGTC...CATCCTCCCCATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTATGGGCTGACTGGTCCTaGCCTGAGCCTCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVWADWS*PEPLQP
Trigger: GGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCA...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGGCCTTCAAGGCCTGCTaGTACCAGAAGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWAFKAC*YQKYME
Trigger: CTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGC...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp CATAGGCCCGTCTCCGCTCTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTAACACATCCGATATCTTaGCAACCACCAACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HRPVSALGPEGNPMYAAVTHPIS*QPPTVE
Trigger: TTCAACAGTTGGTGGTTGCCAAGATATCGGATGTGT...TACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGCGCTGCTCAGCCCCATaGCCAGCAACATCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVRCSAP*PATSGR
Trigger: TCTTCCTGATGTTGCTGGCCATGGGGCTGAGCAGCG...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAAGGGGTTCTGGGTCCTaGGGGAGGCTCACGGTGCTT +
Preference number: 4 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVRGSGS*GRLTVL
Trigger: AAGCACCGTGAGCCTCCCCCAGGACCCAGAACCCCT...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATACTCCCAAAGGGGTTCTaGGTCCTGGGGGAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLILPKGF*VLGEAH
Trigger: GTGAGCCTCCCCCAGGACCCAGAACCCCTTTGGGAG...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454748.7
3UTR CAA 72 bp TGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATaGCTCCTCCAGCTCCATTCCAGGAGACAGGCACCC +
Preference number: 4 (lower is better)
Translates to: WSSSRLIYSPTA*LLQLHSRRQAP
Trigger: GGGTGCCTGTCTCCTGGAATGGAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACATCCAGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCGAGGGTTCATCTTCCTaGGGAGACCCTAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSPWSSSRLIYSPTALLEGSSS*GDPSPK
Trigger: CTTGGGGCTAGGGTCTCCTCAGGAAGATGAACCCTC...GAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp AGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCAGACTGTAGACTGGTaGCCCGCCATCCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: SPWSSSRLIYSPTALLLQQTVDW*PAILDS
Trigger: AGAATCGAGGATGGCGGGTCACCAGTCTACAGTCTG...CTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCTGCCTGAAGGTCGAGTaGAGAAGAGGCCGCACACGA +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCCLKVE*RRGRTR
Trigger: TCGTGTGCGGCCTCTTCTTCACTCGACCTTCAGGCA...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGCGGGCTGCTGAAACTTaGGCCTCTGAGGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLRAAET*ASEVQD
Trigger: ATCTTGGACCTCAGAGGCCCAAGTTTCAGCAGCCCG...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCTCATGCGTGGGTTTCTaGTTCAGGGCTGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLSCVGF*FRAEAV
Trigger: AACTGCCTCAGCCCTGAACCAGAAACCCACGCATGA...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCGCGCCAGAGACAAGATaGCTTCATAGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLAPETR*LHREAH
Trigger: GTGGGCTTCTCTATGAAGCCATCTTGTCTCTGGCGC...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCCGCTGCTCAGCCCCATaGCCAGCAACATCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGSGSREINSCKLILRVVRCSAP*PATSGR
Trigger: TCTTCCTGATGTTGCTGGCCATGGGGCTGAGCAGCG...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCCACTGTGCCAGTCCATaGGGTGTTTGCCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGSGSREINSCKLILRVVHCASP*GVCQQG
Trigger: TCCTTGCTGGCAAACACCTCATGGACTGGCACAGTG...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCTGCAGACCGGGTCAATaGACCCTTGTCTTCCCACGT +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCCRPGQ*TLVFPR
Trigger: ACGTGGGAAGACAAGGGTTCATTGACCCGGTCTGCA...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATGCCTGAAGGTCGAGTaGAGAAGAGGCCGCACACGA +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLICLKVE*RRGRTR
Trigger: TCGTGTGCGGCCTCTTCTTCACTCGACCTTCAGGCA...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATCAATGGCAAAAAGGGTaGTCATCAAGAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGPEGNPMYAAVYKVCRDQWQKG*SSRAVP
Trigger: GGGCACTGCTCTTGATGATCACCCTTTTTGCCATTG...ATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCCTCCGCTCTTGGGCCTaGAGGGAATCCTATGTATGC +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCLRSWA*RESYVC
Trigger: GCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAG...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATACAAGTCCAGGCCCCATaGACACCCCCAAAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIQVQAP*TPPKNA
Trigger: GGCATTCTTTGGGGGTGTTCATGGGGCCTGGACTTG...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAGGGATGTGGTCGAAGCACCTCTTTTaGCTGTGGAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PFEPLYWVLAGDLGVGMWSKHLF*LWRDGK
Trigger: TTTCCCATCTCTCCACAGTCAAAAGAGGTGCTTCGA...CCACATCCCTACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR GCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGCATGCTCTGACCAGCTaGCATCTCCAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLHALTS*HLQEEK
Trigger: CTTCTCTTCCTGGAGATGGCAGCTGGTCAGAGCATG...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCATGCTCTGACCAGCTaGCATCTCCAGGAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKHALTS*HLQEEK
Trigger: CTTCTCTTCCTGGAGATGGCAGCTGGTCAGAGCATG...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATACTGAGTCTCTATGTTaGACTCAGTCACCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: LGPEGNPMYAAVYKVCRDTESLC*TQSPRG
Trigger: TCCGCGAGGTGACTGAGTGCAACATAGAGACTCAGT...ATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTTGGGCTGACTGGTCCTaGCCTGAGCCTCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSWADWS*PEPLQP
Trigger: GGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCA...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCCAAAGATGGGAGAGATaGGGTGGCCCAACAGGATCG +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCQRWER*GGPTGS
Trigger: CGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTG...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCACAGCCAACCAAAGATaGGAGAGATGGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCTANQR*ERWGGP
Trigger: TGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGACAACTGGACACAGATaGGGCCACAGCCAACCAAAG +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKTTGHR*GHSQPK
Trigger: CTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTGT...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAGAGCAGTGCCCACGGTaGGTATGGTCGAAGCACCTC +
Preference number: 4 (lower is better)
Translates to: GNKSGSGSREINSCKLILEQCPR*VWSKHL
Trigger: GAGGTGCTTCGACCATACCCACCGTGGGCACTGCTC...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTTTTGAACCTCTTTACTaGGTGTTAGCTGGTGACTTA +
Preference number: 4 (lower is better)
Translates to: APFQETGTPEVAGLVDITFEPLY*VLAGDL
Trigger: TAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAA...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGAGGGTTCATCTTCCTaGGGAGACCCTAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KSGSGSREINSCKLILRVEGSSS*GDPSPK
Trigger: CTTGGGGCTAGGGTCTCCTCAGGAAGATGAACCCTC...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGGGTTGTAAAGCAGGTTaGCAGGGGGCTTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SGSREINSCKLILRVVYWGCKAG*QGAWHQ
Trigger: CTGATGCCAAGCCCCCTGTCAACCTGCTTTACAACC...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGGATGAAGTAGCTGCCTaGAGGTCGAGTGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVDEVAA*RSSEEE
Trigger: CTCTTCTTCACTCGACCTTCAGGCAGCTACTTCATC...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp TGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATGGCAGCTCCCGCTTCTaGAAGGGAGGGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: WIQGDQQLQADIKSCLLDGSSRF*KGGFIF
Trigger: GAAGATGAACCCTCCCTTGCAGAAGCGGGAGCTGCC...ATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGAGGCCTTCAAGGCCTaGTGGTACCAGAAGTATATG +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKEAFKA*WYQKYM
Trigger: CATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTGATCATCAAGAGCAGTaGCCACGGTGGGTATGGTCG +
Preference number: 4 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCDHQEQ*PRWVWS
Trigger: CGACCATACCCACCGTGGGCACTGCTCTTGATGATC...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCGAGGAAGGAAGGACATaGCTTCAACAAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLEEGRT*LQQRTG
Trigger: TCCTGTCCTTTGTTGAAGCCATGTCCTTCCTTCCTC...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTACTGCAAGGAACCTCCTaGCCCCATAGGCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLLQGTS*PHRPRI
Trigger: TATCCTGGGCCTATGGGGCCAGGAGGTTCCTTGCAG...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAATGGGAGAGATGGGGTaGCCCAACAGGATCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GNKSGSGSREINSCKLILMGEMG*PNRIVR
Trigger: CCTGACGATCCTGTTGGGCCACCCCATCTCTCCCAT...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGGGTCACCAGGTAAGATaGGACCCAGGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: SGSREINSCKLILRVVYWGHQVR*DPGRDC
Trigger: GCAATCCCTTCCTGGGTCCCATCTTACCTGGTGACC...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCGACCAGGAACAGCATaGAGATGTAGATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCRPGTA*RCRWQR
Trigger: TCGCTGCCATCTACATCTTCATGCTGTTCCTGGTCG...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCAATCCAGGGGGCAATaGTCTTCCATACACCCATGC +
Preference number: 4 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCQSRGQ*SSIHPC
Trigger: GCATGGGTGTATGGAAGATCATTGCCCCCTGGATTG...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGCAATCCAGGGGGCAATaGTCTTCCATACACCCATGC +
Preference number: 4 (lower is better)
Translates to: SGSREINSCKLILRVVYWQSRGQ*SSIHPC
Trigger: GCATGGGTGTATGGAAGATCATTGCCCCCTGGATTG...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACATCCAGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCGCAACCACCAACTGTTaGAGGCCAAATTTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: TSSPWSSSRLIYSPTALLATTNC*RPNFAP
Trigger: AGGGGCAAAATTTGGCCTTCAACAGTTGGTGGTTGC...GAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAGGCCGCACACGAACATaGGCAAAAAGACTCCCACTA +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIGRTRT*AKRLPL
Trigger: TAGTGGGAGTCTTTTTGCTCATGTTCGTGTGCGGCC...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp TGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGGGTGTTAGCTGGTaGCTTAGGGGTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: WIQGDQQLQADIKSCLLDLGVSW*LRGRDV
Trigger: CACATCCCTACCCCTAAGTCACCAGCTAACACCCAG...ATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCATCTGCACCTTCTCATaGGTGGGTTTCTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGSGSREINSCKLILRVVICTFS*VGFWFR
Trigger: CCTGAACCAGAAACCCACGCATGAGAAGGTGCAGAT...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGCAGTATACAAAGTATaGAGGGATGGGGAGGATGAC +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKAVYKV*RDGEDD
Trigger: GTCATCCTCCCCATCCCTGCATACTTTGTATACTGC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGCTCACACAGACTCTCTaGGGCAGCTCCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKLTQTL*GSSRFC
Trigger: GCAGAAGCGGGAGCTGCCCCAGAGAGTCTGTGTGAG...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTATACTCAGTTTTGCTaGACCAGAACGGACGGGCAA +
Preference number: 4 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLYTQFC*TRTDGQ
Trigger: TTGCCCGTCCGTTCTGGTCCAGCAAAACTGAGTATA...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGGTACCAGAAGTATATaGAGGGTGTTGTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKGTRSI*RVLSVH
Trigger: GTGAACGGACAACACCCTCCATATACTTCTGGTACC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGAAAGAGAAGGTGTCCTaGAGTGGAGTAATGATGCCC +
Preference number: 4 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLKEKVS*SGVMMP
Trigger: GGGCATCATTACTCCACTCCAGGACACCTTCTCTTT...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAGGTCACCAGGTAAGATaGGACCCAGGAAGGGATTGC +
Preference number: 4 (lower is better)
Translates to: GNKSGSGSREINSCKLILGHQVR*DPGRDC
Trigger: GCAATCCCTTCCTGGGTCCCATCTTACCTGGTGACC...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTTGTGGAGGGGAAGGATaGGTGGGGAACCAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KSGSGSREINSCKLILRVCGGEG*VGNQSR
Trigger: TCTGCTTTGGTTCCCCACCCATCCTTCCCCTCCACA...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTGGAGAACCATGCTTTTaGTGTGCTGGGGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSGEPCF*CAGEGH
Trigger: GTGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCC...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCGGAGTTCCAGTAGACTaGTTTATTCACCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLGVPVD*FIHQQH
Trigger: ATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCC...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR GCA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTTCTTCTCTGTCATCTaGACCTTCTCATGCGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGSGSREINSCKLILRVVFFSVI*TFSCVG
Trigger: ACCCACGCATGAGAAGGTGCAGATGACAGAGAAGAA...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTTCTTCCATACACCCATaGCACCCTGACGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: KSGSGSREINSCKLILRVSSIHP*HPDACS
Trigger: AGAGCATGCGTCAGGGTGGCATGGGTGTATGGAAGA...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCAACAAAGGACAGGAATaGAAACTTTGGGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCNKGQE*KLWALA
Trigger: AGCGAGGGCCCAAAGTTTGCATTCCTGTCCTTTGTT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCGGAGTAATGATGCCCTaGATAATCCCTATTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCGVMMP*IIPIAL
Trigger: CAGCGCAATAGGGATTATGCAGGGCATCATTACTCC...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAAAGGATGTCGAAGGCTaGGCCTCTGTCTTCATCTCA +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIKDVEG*ASVFIS
Trigger: TGAGATGAAGACAGAGGCCCAGCCTTCGACATCCTT...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTGCACCTTCTCATGCGTaGGTTTCTGGTTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSAPSHA*VSGSGL
Trigger: CAGCCCTGAACCAGAAACCCACGCATGAGAAGGTGC...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCGCCAGGCATTGTAGATaGAGGTTGGGTTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGSGSREINSCKLILRVVARHCR*RLGCKA
Trigger: TGCTTTACAACCCAACCTCCATCTACAATGCCTGGC...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTAATGCTTTTGATGTGCTaGGGAAGGCCACTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLMLLMC*GRPLSQ
Trigger: CTGGCTCAGTGGCCTTCCCCAGCACATCAAAAGCAT...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATACAGGAATGCAAACTTTaGGCCCTCGCTAGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIQECKL*ALASLK
Trigger: CTTAAGGCTAGCGAGGGCCCAAAGTTTGCATTCCTG...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CTTGTAGAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAACAGCCAACCAAAGATaGGAGAGATGGGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVEFLPFEPLYWVLAGDLTANQR*ERWGGP
Trigger: TGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGT...TAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTCTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCCTTACATCCAGTCCTTaGAGTTCCAGTAGACTGATT +
Preference number: 4 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLLTSSP*SSSRLI
Trigger: AATCAGTCTACTGGAACTCCAAGGACTGGATGTAAG...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTCGACCAGGAACAGCATaGAGATGTAGATGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSRPGTA*RCRWQR
Trigger: TCGCTGCCATCTACATCTTCATGCTGTTCCTGGTCG...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGATCCTCGATTCTGTCTaGGGCCTTCAAGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKILDSV*GLQGLL
Trigger: CAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGAT...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGTAGAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTACGAGAAAGGCATCACTaGGACAGTTGTTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVEFLPFEPLYWVLAGDLRERHH*DSCWTG
Trigger: CCCAGTCCAACAACTGTCTCAGTGATGCCTTTCTCG...TAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTCTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGCTTTGTATGTTTCCTaGAGAAAGAGAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKALYVS*RKRRCP
Trigger: AGGACACCTTCTCTTTCTTCAGGAAACATACAAAGC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAATACGACAACGACGATaGTGGGGAAGACTATCCAGT +
Preference number: 4 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVIRQRR*WGRLSS
Trigger: ACTGGATAGTCTTCCCCATCATCGTCGTTGTCGTAT...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp ACATCCAGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCTCATGGTCACAAAGATaGTTAGCAGCACAACTGGAC +
Preference number: 4 (lower is better)
Translates to: TSSPWSSSRLIYSPTALLSWSQR*LAAQLD
Trigger: GTCCAGTTGTGCTGCTAATCATCTTTGTGACCATGA...GAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGGAGTTCCAGTAGACTaGTTTATTCACCAACAGCAT +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKGVPVD*FIHQQH
Trigger: ATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp TTACCCAAGAATAGACAACTATGCCCCAACAATCTAACTCATATCCCAGAAAAATCCTGGCTAACACGGTaGAACCCTGTCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPKNRQLCPNNLTHIPEKSWLTR*NPVSAL
Trigger: GAGAGCAGAGACAGGGTTTCACCGTGTTAGCCAGGA...TTTTTCTGGGATATGAGTTAGATTGTTGGGGCATAGTTGTCTATTCTTGGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594180.1
CDS-3UTR GCA 90 bp TGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATACTGAGTCTCTATGTTaGACTCAGTCACCTCGCGGA +
Preference number: 4 (lower is better)
Translates to: WIQGDQQLQADIKSCLLDTESLC*TQSPRG
Trigger: TCCGCGAGGTGACTGAGTGCAACATAGAGACTCAGT...ATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAAACAAAGGACAGGAATaGAAACTTTGGGCCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLINKGQE*KLWALA
Trigger: AGCGAGGGCCCAAAGTTTGCATTCCTGTCCTTTGTT...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGGGAGTAATGATGCCCTaGATAATCCCTATTGCGCTG +
Preference number: 4 (lower is better)
Translates to: SGSREINSCKLILRVVYWGVMMP*IIPIAL
Trigger: CAGCGCAATAGGGATTATGCAGGGCATCATTACTCC...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGGACCCAGGAAGGGATTaGAAGTCCAGGCCCCATGAA +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKDPGRD*KSRPHE
Trigger: TTCATGGGGCCTGGACTTGCAATCCCTTCCTGGGTC...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTATACAGAAATTTGCTTaGGCTGACTGGTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCIQKFA*ADWSWP
Trigger: AGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTAT...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAGGTACCAGAAGTATATaGAGGGTGTTGTCCGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIGTRSI*RVLSVH
Trigger: GTGAACGGACAACACCCTCCATATACTTCTGGTACC...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTAGCCTTCAAGGCCTGCTaGTACCAGAAGTATATGGAG +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLAFKAC*YQKYME
Trigger: CTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGC...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGATTGTAGATGGAGGTTaGGTTGTAAAGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: PPLGNKSGSGSREINSCKIVDGG*VVKQVD
Trigger: GTCAACCTGCTTTACAACCCAACCTCCATCTACAAT...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAGCCAGGCATTGTAGATaGAGGTTGGGTTGTAAAGCA +
Preference number: 4 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVARHCR*RLGCKA
Trigger: TGCTTTACAACCCAACCTCCATCTACAATGCCTGGC...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CCA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTGAGGAAGGAAGGACATaGCTTCAACAAAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCEEGRT*LQQRTG
Trigger: TCCTGTCCTTTGTTGAAGCCATGTCCTTCCTTCCTC...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACATCCAGTCCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCCCAGGATACAGCCATaGTTTCAAATACGACAACGA +
Preference number: 4 (lower is better)
Translates to: TSSPWSSSRLIYSPTALLPRIQP*FQIRQR
Trigger: TCGTTGTCGTATTTGAAACCATGGCTGTATCCTGGG...GAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGGACTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCAAAAGACTCCCACTATaGGCAGCTTTGTATGTTTCC +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCKRLPL*AALYVS
Trigger: GGAAACATACAAAGCTGCTCATAGTGGGAGTCTTTT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTCCCAGGACATGTAGGTaGTCGGCTTCATACAAAGAT +
Preference number: 4 (lower is better)
Translates to: KSGSGSREINSCKLILRVPRTCR*SASYKD
Trigger: ATCTTTGTATGAAGCCGATCACCTACATGTCCTGGG...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTGGATGGGGAAAACAATaGTGGTGGTCACCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSGWGKQ*WWSPGK
Trigger: CTTACCTGGTGACCACCATCATTGTTTTCCCCATCC...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATGTCAGAAATCACTGTaGCAGTCCATGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLICQKSL*QSMRCL
Trigger: CAAACACCTCATGGACTGGCACAGTGATTTCTGACA...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAGAATATACTCAGTTTTaGTGGACCAGAACGGACGGG +
Preference number: 4 (lower is better)
Translates to: GNKSGSGSREINSCKLILEYTQF*WTRTDG
Trigger: CCCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTC...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGACCATGCTTTTGATGTaGTGGGGAAGGCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKTMLLM*WGRPLS
Trigger: GCTCAGTGGCCTTCCCCAGCACATCAAAAGCATGGT...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGGCGCCAGAGACAAGATaGCTTCATAGAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKAPETR*LHREAH
Trigger: GTGGGCTTCTCTATGAAGCCATCTTGTCTCTGGCGC...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCATTGTAGATGGAGGTTaGGTTGTAAAGCAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCIVDGG*VVKQVD
Trigger: GTCAACCTGCTTTACAACCCAACCTCCATCTACAAT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAGCTTTGTATGTTTCCTaGAGAAAGAGAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGNKSGSGSREINSCKLIALYVS*RKRRCP
Trigger: AGGACACCTTCTCTTTCTTCAGGAAACATACAAAGC...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGCAATGGCAAAAAGGGTaGTCATCAAGAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKQWQKG*SSRAVP
Trigger: GGGCACTGCTCTTGATGATCACCCTTTTTGCCATTG...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTATGTCAGAAATCACTGTaGCAGTCCATGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: GNKSGSGSREINSCKLILCQKSL*QSMRCL
Trigger: CAAACACCTCATGGACTGGCACAGTGATTTCTGACA...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGGGGACATTTCTCCCATaGAACGGGAAACTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKGTFLP*NGKLEG
Trigger: TCCTTCCAGTTTCCCGTTCCATGGGAGAAATGTCCC...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCAGTCACATTACAAGTTaGTGGGTACTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCSHITS*WVLCFI
Trigger: GATGAAACAAAGTACCCATCAACTTGTAATGTGACT...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR GCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGGAATATACTCAGTTTTaGTGGACCAGAACGGACGGG +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKEYTQF*WTRTDG
Trigger: CCCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTC...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTAACACATCCGATATCTTaGCAACCACCAACTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLTHPIS*QPPTVE
Trigger: TTCAACAGTTGGTGGTTGCCAAGATATCGGATGTGT...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CCA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGTTGACTGTGGAGAGATaGGAAAAGGGTTCAGAATAT +
Preference number: 4 (lower is better)
Translates to: SGSREINSCKLILRVVYWLTVER*EKGSEY
Trigger: ATATTCTGAACCCTTTTCCCATCTCTCCACAGTCAA...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR TCA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTCTAGCCTTAAGAAACTaGGTCTCTATGTTGCACTCA +
Preference number: 4 (lower is better)
Translates to: REINSCKLILRVVYWICSLALRN*VSMLHS
Trigger: TGAGTGCAACATAGAGACTCAGTTTCTTAAGGCTAG...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTATTTGAACCTCTTTACTaGGTGTTAGCTGGTGACTTA +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLFEPLY*VLAGDL
Trigger: TAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAA...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR TCA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGAAAAGACTCCCACTATaGGCAGCTTTGTATGTTTCC +
Preference number: 4 (lower is better)
Translates to: EINSCKLILRVVYWICSKKRLPL*AALYVS
Trigger: GGAAACATACAAAGCTGCTCATAGTGGGAGTCTTTT...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR TCA 90 bp ACTAATACAGACTGGAAGCCTTGTGACAGGAAAACTGAACATCTGAGACATCTAAGTCACATTACAAGTTaGTGGGTACTTTGTTTCATC +
Preference number: 4 (lower is better)
Translates to: TNTDWKPCDRKTEHLRHLSHITS*WVLCFI
Trigger: GATGAAACAAAGTACCCATCAACTTGTAATGTGACT...TAGATGTCTCAGATGTTCAGTTTTCCTGTCACAAGGCTTCCAGTCTGTATTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR GCA 90 bp AAAAATGTGCACATATGTAGTACATCAGGAACATGCATAAGAATGTTTGCAGCAAGTACATCAGGAACATaGATAAGAATGTTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KNVHICSTSGTCIRMFAASTSGT*IRMFAA
Trigger: TGCTGCAAACATTCTTATGCATGTTCCTGATGTACT...TGCTGCAAACATTCTTATGCATGTTCCTGATGTACTACATATGTGCACATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594180.1
CDS-3UTR GCA 90 bp AAGAATAGACAACTATGCCCCAACAATCTAACTCATATCCCAGAAAAATGTGCATATCCCAGAAAAATGTaGACATATGTAGTACATCAG +
Preference number: 4 (lower is better)
Translates to: KNRQLCPNNLTHIPEKCAYPRKM*TYVVHQ
Trigger: CTGATGTACTACATATGTGCACATTTTTCTGGGATA...TGCACATTTTTCTGGGATATGAGTTAGATTGTTGGGGCATAGTTGTCTATTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000594180.1
CDS-3UTR CAA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCGGCCCGTCTCCGCTCTaGGGCCTGAAGGGAATCCTA +
Preference number: 5 (lower is better)
Translates to: PAPFQETGTPEVAGLVDIGPSPL*GLKGIL
Trigger: TAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCC...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp GGTTCAGGGCTGAGGCAGTTAACGCCTCCAATACAGAAATTTGCTTaGGCTGACTGGTCCTGGCCTGAGCCTCTGCAACCCGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GSGLRQLTPPIQKFA*ADWSWPEPLQPGLL
Trigger: CAGCAGCCCGGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAGGCGTTAACTGCCTCAGCCCTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp CAACTGGACACAGATGGGGCCACAGCCAACCAAAGATGGGAGAGATaGGGTGGCCCAACAGGATCGTCAGGTCTGCAAGGAACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QLDTDGATANQRWER*GGPTGSSGLQGTSW
Trigger: CCAGGAGGTTCCTTGCAGACCTGACGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp GATGTGCTGGGGAAGGCCACTGAGCCAGGCATTGTAGATGGAGGTTaGGTTGTAAAGCAGGTTGACAGGGGGCTTGGCATCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: DVLGKATEPGIVDGG*VVKQVDRGLGIRRQ
Trigger: CTGCCTCCTGATGCCAAGCCCCCTGTCAACCTGCTTTACAACCCAACCTCCATCTACAATGCCTGGCTCAGTGGCCTTCCCCAGCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS CCA 90 bp CAGTTAACGCCTCCAATACAGAAATTTGCTTGGGCTGACTGGTCCTaGCCTGAGCCTCTGCAACCCGGGCTGCTGAAACTTGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QLTPPIQKFAWADWS*PEPLQPGLLKLGPL
Trigger: CAGAGGCCCAAGTTTCAGCAGCCCGGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAGGCGTTAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp TTAGCAGCACAACTGGACACAGATGGGGCCACAGCCAACCAAAGATaGGAGAGATGGGGTGGCCCAACAGGATCGTCAGGTCTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LAAQLDTDGATANQR*ERWGGPTGSSGLQG
Trigger: TCCTTGCAGACCTGACGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTGTGCTGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp CATAGGCCCGTCTCCGCTCTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTACAGTCCATGAGGTGTTaGCCAGCAAGGATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: HRPVSALGPEGNPMYAAVQSMRC*PARMSK
Trigger: CTTCGACATCCTTGCTGGCAAACACCTCATGGACTG...TACTGCCGCATACATAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp CTTAGGGGTAGGGATGTGGAGGCTGTCATAGGCCCGTCTCCGCTCTTGGGCCTGAGTATATGGAGGGTGTaGTCCGTTCACATTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LRGRDVEAVIGPSPLLGLSIWRV*SVHIQD
Trigger: ATCCTGAATGTGAACGGACAACACCCTCCATATACT...CAGGCCCAAGAGCGGAGACGGGCCTATGACAGCCTCCACATCCCTACCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACCTCTTTTGAGGTGCTaGAGTCCCAGGACATGTAGG +
Preference number: 5 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRPLLRC*SPRTCR
Trigger: CCTACATGTCCTGGGACTCAAGCACCTCAAAAGAGG...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS GCA 90 bp AACGGACGGGCAAGGAGGACCTCACTCTCTTTCTTCTCTGTCATCTaGACCTTCTCATGCGTGGGTTTCTGGTTCAGGGCTGAGGCAGTT +
Preference number: 5 (lower is better)
Translates to: NGRARRTSLSFFSVI*TFSCVGFWFRAEAV
Trigger: AACTGCCTCAGCCCTGAACCAGAAACCCACGCATGAGAAGGTGCAGATGACAGAGAAGAAAGAGAGTGAGGTCCTCCTTGCCCGTCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp GGTGACCCGCCATCCTCGATTCTGTCTGAGGCCTTCAAGGCCTGCTaGTACCAGAAGTATATGGAGGGTGTTGTCCGTTCACATTCAGGA +
Preference number: 5 (lower is better)
Translates to: GDPPSSILSEAFKAC*YQKYMEGVVRSHSG
Trigger: TCCTGAATGTGAACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGATGGCGGGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000594917.1
ENST00000597969.5
CDS TCA 90 bp CGTTTGACTTCCTGGGACACTGTCAGAAATCACTGTGCCAGTCCATaGGGTGTTTGCCAGCAAGGATGTCGAAGGCTGGGCCTCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RLTSWDTVRNHCASP*GVCQQGCRRLGLCL
Trigger: AAGACAGAGGCCCAGCCTTCGACATCCTTGCTGGCAAACACCTCATGGACTGGCACAGTGATTTCTGACAGTGTCCCAGGAAGTCAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS GCA 90 bp ACTGGTGACCCGCCATCCTCGATTCTGTCTGAGGCCTTCAAGGCCTaGTGGTACCAGAAGTATATGGAGGGTGTTGTCCGTTCACATTCA +
Preference number: 5 (lower is better)
Translates to: TGDPPSSILSEAFKA*WYQKYMEGVVRSHS
Trigger: TGAATGTGAACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGATGGCGGGTCACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000594917.1
ENST00000597969.5
CDS CCA 90 bp ACCATCATGGTCACAAAGATGATTAGCAGCACAACTGGACACAGATaGGGCCACAGCCAACCAAAGATGGGAGAGATGGGGTGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: TIMVTKMISSTTGHR*GHSQPKMGEMGWPN
Trigger: GTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTGTGCTGCTAATCATCTTTGTGACCATGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp TCCTCCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACTCCAATACAGAAATTaGCTTGGGCTGACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: SSSSIPGDRHPRSSRTGRLQYRN*LGLTGP
Trigger: AGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAG...TCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGGGCCCGTCTCCGCTCTaGGGCCTGAAGGGAATCCTA +
Preference number: 5 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLGPSPL*GLKGIL
Trigger: TAGGATTCCCTTCAGGCCCAAGAGCGGAGACGGGCC...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTGTCGAAGCACCTCTTTaGACTGTGGAGAGATGGGAA +
Preference number: 5 (lower is better)
Translates to: APFQETGTPEVAGLVDITVEAPL*TVERWE
Trigger: TTCCCATCTCTCCACAGTCAAAAGAGGTGCTTCGAC...AGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGCTTGTCTTCCCACGTTaGACTTCCTGGGACACTGTC +
Preference number: 5 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWLVFPR*TSWDTV
Trigger: GACAGTGTCCCAGGAAGTCAAACGTGGGAAGACAAG...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp GATGACAATGGCAAAAAGGGTGATCATCAAGAGCAGTGCCCACGGTGGGTATGGGGCAACCACCAACTGTaGAAGGCCAAATTTTGCCCC +
Preference number: 5 (lower is better)
Translates to: DDNGKKGDHQEQCPRWVWGNHQL*KAKFCP
Trigger: GGGGCAAAATTTGGCCTTCAACAGTTGGTGGTTGCC...CCATACCCACCGTGGGCACTGCTCTTGATGATCACCCTTTTTGCCATTGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp CCAGCTCCATTCCAGGAGACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCAGAATGCCCCTCCTCTaGGAAATAAAAGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: PAPFQETGTPEVAGLVDIRMPLL*EIKVVL
Trigger: CAGAACCACTTTTATTTCCAAGAGGAGGGGCATTCT...GATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp ATCAAGAGCAGTGCCCACGGTGGGTATGGTCGAAGCACCTCTTTTGACTGTGGATATTCACCAACAGCATaGCTCCTCCAGCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: IKSSAHGGYGRSTSFDCGYSPTA*LLQLHS
Trigger: GGAATGGAGCTGGAGGAGCAATGCTGTTGGTGAATA...TCCACAGTCAAAAGAGGTGCTTCGACCATACCCACCGTGGGCACTGCTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS GCA 90 bp GAAGGTGTCCTGGAGTGGAGTAATGATGCCCTGCATAATCCCTATTaGGCTGCTCAGCCCCATGGCCAGCAACATCAGGAAGAAGATAAA +
Preference number: 5 (lower is better)
Translates to: EGVLEWSNDALHNPY*AAQPHGQQHQEEDK
Trigger: TTTATCTTCTTCCTGATGTTGCTGGCCATGGGGCTGAGCAGCGCAATAGGGATTATGCAGGGCATCATTACTCCACTCCAGGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 90 bp AAGGAGGCAACGGAGCCAAGGCCTATGCCTGTGTTAGACAAAACTTaGCCCCCTGCTAGAGACCACACACTCATATTGTACACATCCGAT +
Preference number: 5 (lower is better)
Translates to: KEATEPRPMPVLDKT*PPARDHTLILYTSD
Trigger: ATCGGATGTGTACAATATGAGTGTGTGGTCTCTAGCAGGGGGTCAAGTTTTGTCTAACACAGGCATAGGCCTTGGCTCCGTTGCCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp GCCTCCACTGTTAAGCCACAGGTAGGCAAAGCGCCAGAGACAAGATaGCTTCATAGAGAAGCCCACCTGAGCCAGAATATACTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: ASTVKPQVGKAPETR*LHREAHLSQNILSF
Trigger: AAAACTGAGTATATTCTGGCTCAGGTGGGCTTCTCTATGAAGCCATCTTGTCTCTGGCGCTTTGCCTACCTGTGGCTTAACAGTGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp GAGCAGCTTTGTATGTTTCCTGAAGAAAGAGAAGGTGTCCTGGAGTaGAGTAATGATGCCCTGCATAATCCCTATTGCGCTGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: EQLCMFPEEREGVLE*SNDALHNPYCAAQP
Trigger: GGGCTGAGCAGCGCAATAGGGATTATGCAGGGCATCATTACTCCACTCCAGGACACCTTCTCTTTCTTCAGGAAACATACAAAGCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 90 bp GAAGACTATCCAGTAGTCACTCAGCAGTCTGATGAAGTAGCTGCCTaGAGGTCGAGTGAAGAAGAGGCCGCACACGAACATGAGCAAAAA +
Preference number: 5 (lower is better)
Translates to: EDYPVVTQQSDEVAA*RSSEEEAAHEHEQK
Trigger: TTTTTGCTCATGTTCGTGTGCGGCCTCTTCTTCACTCGACCTTCAGGCAGCTACTTCATCAGACTGCTGAGTGACTACTGGATAGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 90 bp CCAAAGCAGAAAACCCATGAGTCTTCGGGCAGTAAGAGAATGAGATaGCTGGGTTCTTTCACCCAGAGTGAATTGAAAGGTCTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: PKQKTHESSGSKRMR*LGSFTQSELKGLAP
Trigger: AGGGGCCAGACCTTTCAATTCACTCTGGGTGAAAGAACCCAGTCATCTCATTCTCTTACTGCCCGAAGACTCATGGGTTTTCTGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTCGTCGACAGATCGGTTaGGGCGACACCCCTCGATCT +
Preference number: 5 (lower is better)
Translates to: KSGSGSREINSCKLILRVRRQIG*GDTPRS
Trigger: AGATCGAGGGGTGTCGCCCAAACCGATCTGTCGACG...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CAA 90 bp CCTTGGAGTTCCAGTAGACTGATTTATTCACCAACAGCATTGCTCCTCCAGCTCGTTGAAGGCCAAATTTaGCCCCTTCCAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: PWSSSRLIYSPTALLLQLVEGQI*PLPGVE
Trigger: CTCTACTCCTGGAAGGGGCAAAATTTGGCCTTCAAC...GAGCTGGAGGAGCAATGCTGTTGGTGAATAAATCAGTCTACTGGAACTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9
CDS-3UTR CAA 90 bp CTTGGGCCTGAAGGGAATCCTATGTATGCGGCAGTATACAAAGTATGCAGGGATGTTGAAGGCCAAATTTaGCCCCTTCCAGGAGTAGAG +
Preference number: 5 (lower is better)
Translates to: LGPEGNPMYAAVYKVCRDVEGQI*PLPGVE
Trigger: CTCTACTCCTGGAAGGGGCAAAATTTGGCCTTCAAC...ATCCCTGCATACTTTGTATACTGCCGCATACATAGGATTCCCTTCAGGCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGGGCAACCACCAACTGTaGAAGGCCAAATTTTGCCCC +
Preference number: 5 (lower is better)
Translates to: PPLGNKSGSGSREINSCKGNHQL*KAKFCP
Trigger: GGGGCAAAATTTGGCCTTCAACAGTTGGTGGTTGCC...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAAGGTTGACAGGGGGCTaGGCATCAGGAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LGNKSGSGSREINSCKLIRLTGG*ASGGSF
Trigger: GAAACTGCCTCCTGATGCCAAGCCCCCTGTCAACCT...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTAGGTTGACAGGGGGCTaGGCATCAGGAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCRLTGG*ASGGSF
Trigger: GAAACTGCCTCCTGATGCCAAGCCCCCTGTCAACCT...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCCGGAGAACCATGCTTTaGATGTGCTGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SGSGSREINSCKLILRVVRRTML*MCWGRP
Trigger: TGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCCG...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp TGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATGGAGGCTCACGGTGCTaGAGTCCCAGGACATGTAGG +
Preference number: 5 (lower is better)
Translates to: WIQGDQQLQADIKSCLLDGGSRC*SPRTCR
Trigger: CCTACATGTCCTGGGACTCAAGCACCGTGAGCCTCC...ATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGCAGGAATTGACCACATaGAAGTACAGGCCGAGGATG +
Preference number: 5 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVQELTT*KYRPRM
Trigger: CATCCTCGGCCTGTACTTCAATGTGGTCAATTCCTG...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp ACAGGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTATTCACCAACAGCATaGCTCCTCCAGCTCCATTCC +
Preference number: 5 (lower is better)
Translates to: TGTPEVAGLVDITSIVYVYSPTA*LLQLHS
Trigger: GGAATGGAGCTGGAGGAGCAATGCTGTTGGTGAATA...CACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 90 bp ACTATGAGCAGCTTTGTATGTTTCCTGAAGAAAGAGAAGGTGTCCTaGAGTGGAGTAATGATGCCCTGCATAATCCCTATTGCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: TMSSFVCFLKKEKVS*SGVMMPCIIPIALL
Trigger: GAGCAGCGCAATAGGGATTATGCAGGGCATCATTACTCCACTCCAGGACACCTTCTCTTTCTTCAGGAAACATACAAAGCTGCTCATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS-3UTR CAA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATACAGTCCATGAGGTGTTaGCCAGCAAGGATGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LGNKSGSGSREINSCKLIQSMRC*PARMSK
Trigger: CTTCGACATCCTTGCTGGCAAACACCTCATGGACTG...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGCTGAGGTCCAAGATGTaGCAGACCGGGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: SGSREINSCKLILRVVYWLRSKM*QTGSMN
Trigger: GTTCATTGACCCGGTCTGCAACATCTTGGACCTCAG...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GGCACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGACCTTCCCAGTGGACTaGAGCCCATTGATCATGAAA +
Preference number: 5 (lower is better)
Translates to: GTPEVAGLVDITSIVYVLTFPVD*SPLIMK
Trigger: TTTCATGATCAATGGGCTCAAGTCCACTGGGAAGGT...CAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTCGGAGAACCATGCTTTaGATGTGCTGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: KSGSGSREINSCKLILRVRRTML*MCWGRP
Trigger: TGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCCG...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTACTTGTCTTCCCACGTTaGACTTCCTGGGACACTGTC +
Preference number: 5 (lower is better)
Translates to: GNKSGSGSREINSCKLILLVFPR*TSWDTV
Trigger: GACAGTGTCCCAGGAAGTCAAACGTGGGAAGACAAG...TAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTCTGAGGTCCAAGATGTaGCAGACCGGGTCAATGAAC +
Preference number: 5 (lower is better)
Translates to: KSGSGSREINSCKLILRVLRSKM*QTGSMN
Trigger: GTTCATTGACCCGGTCTGCAACATCTTGGACCTCAG...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp ACCCCAGAAGTAGCAGGACTGGTAGACATCACTAGTATTGTATATGTGTTGTGCCTCCAATACAGAAATTaGCTTGGGCTGACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: TPEVAGLVDITSIVYVLCLQYRN*LGLTGP
Trigger: AGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAG...GCACAACACATATACAATACTAGTGATGTCTACCAGTCCTGCTACTTCTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTACAGGAATTGACCACATaGAAGTACAGGCCGAGGATG +
Preference number: 5 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVQELTT*KYRPRM
Trigger: CATCCTCGGCCTGTACTTCAATGTGGTCAATTCCTG...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCGTGGACTTGAGCCCATaGATCATGAAAGCACCAACA +
Preference number: 5 (lower is better)
Translates to: SGSGSREINSCKLILRVVVDLSP*IMKAPT
Trigger: TGTTGGTGCTTTCATGATCAATGGGCTCAAGTCCAC...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCAGTATATGGAGGGTGTaGTCCGTTCACATTCAGGAT +
Preference number: 5 (lower is better)
Translates to: SGSGSREINSCKLILRVVSIWRV*SVHIQD
Trigger: ATCCTGAATGTGAACGGACAACACCCTCCATATACT...GACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp TCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGGTGGACTTGAGCCCATaGATCATGAAAGCACCAACA +
Preference number: 5 (lower is better)
Translates to: SGSREINSCKLILRVVYWVDLSP*IMKAPT
Trigger: TGTTGGTGCTTTCATGATCAATGGGCTCAAGTCCAC...CCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp CCTCCTCTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCAGGGAGATCAACAGTaGCAAGCTGATATTAAGAGT +
Preference number: 5 (lower is better)
Translates to: PPLGNKSGSGSREINSCKQGDQQ*QADIKS
Trigger: ACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTG...CTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAGAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTAGAATATACTCAGTTTaGCTGGACCAGAACGGACGG +
Preference number: 5 (lower is better)
Translates to: KSGSGSREINSCKLILRVRIYSV*LDQNGR
Trigger: CCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTCT...AACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTAAGAATGCCCCTCCTCTaGGAAATAAAAGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVRMPLL*EIKVVL
Trigger: CAGAACCACTTTTATTTCCAAGAGGAGGGGCATTCT...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp CTTGTAGAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTATTCACCCAGAGTGAATaGAAAGGTCTGGCCCCTACT +
Preference number: 5 (lower is better)
Translates to: LVEFLPFEPLYWVLAGDLFTQSE*KGLAPT
Trigger: AGTAGGGGCCAGACCTTTCAATTCACTCTGGGTGAA...TAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTCTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp AGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTACCTTCCCAGTGGACTaGAGCCCATTGATCATGAAA +
Preference number: 5 (lower is better)
Translates to: REINSCKLILRVVYWICSTFPVD*SPLIMK
Trigger: TTTCATGATCAATGGGCTCAAGTCCACTGGGAAGGT...AGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp CTTGGAAATAAAAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATAGACCACACACTCATATaGTACACATCCGATATCTTG +
Preference number: 5 (lower is better)
Translates to: LGNKSGSGSREINSCKLIDHTLI*YTSDIL
Trigger: CAAGATATCGGATGTGTACAATATGAGTGTGTGGTC...TATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTTTTATTTCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAGTGGTTCTGGATCCAGGGAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTGACCACACACTCATATaGTACACATCCGATATCTTG +
Preference number: 5 (lower is better)
Translates to: KWFWIQGDQQLQADIKSCDHTLI*YTSDIL
Trigger: CAAGATATCGGATGTGTACAATATGAGTGTGTGGTC...ACAACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTGGATCCAGAACCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp GAATTTCTTCCTTTTGAACCTCTTTACTGGGTGTTAGCTGGTGACTTAGGGGTACAGGGAGATCAACAGTaGCAAGCTGATATTAAGAGT +
Preference number: 5 (lower is better)
Translates to: EFLPFEPLYWVLAGDLGVQGDQQ*QADIKS
Trigger: ACTCTTAATATCAGCTTGCAACTGTTGATCTCCCTG...TACCCCTAAGTCACCAGCTAACACCCAGTAAAGAGGTTCAAAAGGAAGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS-3UTR CAA 90 bp GAGATCAACAGTTGCAAGCTGATATTAAGAGTTGTCTATTGGATCTGTTCTAAGAGAATATACTCAGTTTaGCTGGACCAGAACGGACGG +
Preference number: 5 (lower is better)
Translates to: EINSCKLILRVVYWICSKRIYSV*LDQNGR
Trigger: CCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTCT...CTTAGAACAGATCCAATAGACAACTCTTAATATCAGCTTGCAACTGTTGATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS-3UTR CAA 90 bp AAGAATAGACAACTATGCCCCAACAATCTAACTCATATCCCAGAAAAATGTGCATACTTCCAGAGTGATTaGTTACCCAAGAATAGACAA +
Preference number: 5 (lower is better)
Translates to: KNRQLCPNNLTHIPEKCAYFQSD*LPKNRQ
Trigger: TTGTCTATTCTTGGGTAACAAATCACTCTGGAAGTA...TGCACATTTTTCTGGGATATGAGTTAGATTGTTGGGGCATAGTTGTCTATTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594180.1
CDS CCA 72 bp TCTCCTCAGGCCCCTTCAGGCGTCGACAGATCGGTTTaGGCGACACCCCTCGATCTGCCTGGCGCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: SPQAPSGVDRSV*ATPLDLPGARP
Trigger: AGGCCGCGCGCCAGGCAGATCGAGGGGTGTCGCCCAAACCGATCTGTCGACGCCTGAAGGGGCCTGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598828.1
CDS CAA 72 bp ATCTCCTCAGGCCCCTTCAGGCGTCGACAGATCGGTTaGGGCGACACCCCTCGATCTGCCTGGCGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: ISSGPFRRRQIG*GDTPRSAWRAA
Trigger: GGCCGCGCGCCAGGCAGATCGAGGGGTGTCGCCCAAACCGATCTGTCGACGCCTGAAGGGGCCTGAGGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598828.1
CDS CAA 90 bp AGCCTAGCAATCTCCTCAGGCCCCTTCAGGCGTCGACAGATCGGTTaGGGCGACACCCCTCGATCTGCCTGGCGCGCGGCCTTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: SLAISSGPFRRRQIG*GDTPRSAWRAAFPA
Trigger: GGCGGGAAAGGCCGCGCGCCAGGCAGATCGAGGGGTGTCGCCCAAACCGATCTGTCGACGCCTGAAGGGGCCTGAGGAGATTGCTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598828.1
CDS CCA 72 bp TGGGGCCACAGCCAACCAAAGATGGGAGAGATGGGGTaGCCCAACAGGATCGTCAGGTCTGCAAGGAACCTC +
Preference number: 6 (lower is better)
Translates to: WGHSQPKMGEMG*PNRIVRSARNL
Trigger: GAGGTTCCTTGCAGACCTGACGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598828.1
CDS CCA 72 bp CAACTGGACACAGATGGGGCCACAGCCAACCAAAGATaGGAGAGATGGGGTGGCCCAACAGGATCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: QLDTDGATANQR*ERWGGPTGSSG
Trigger: ACCTGACGATCCTGTTGGGCCACCCCATCTCTCCCATCTTTGGTTGGCTGTGGCCCCATCTGTGTCCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 72 bp GGGAAGGCCACTGAGCCAGGCATTGTAGATGGAGGTTaGGTTGTAAAGCAGGTTGACAGGGGGCTTGGCATC +
Preference number: 6 (lower is better)
Translates to: GKATEPGIVDGG*VVKQVDRGLGI
Trigger: GATGCCAAGCCCCCTGTCAACCTGCTTTACAACCCAACCTCCATCTACAATGCCTGGCTCAGTGGCCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS CAA 72 bp GGGCTGCTGAAACTTGGGCCTCTGAGGTCCAAGATGTaGCAGACCGGGTCAATGAACCCTTGTCTTCCCACG +
Preference number: 6 (lower is better)
Translates to: GLLKLGPLRSKM*QTGSMNPCLPT
Trigger: CGTGGGAAGACAAGGGTTCATTGACCCGGTCTGCAACATCTTGGACCTCAGAGGCCCAAGTTTCAGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CAA 90 bp CTGCAACCCGGGCTGCTGAAACTTGGGCCTCTGAGGTCCAAGATGTaGCAGACCGGGTCAATGAACCCTTGTCTTCCCACGTTTGACTTC +
Preference number: 6 (lower is better)
Translates to: LQPGLLKLGPLRSKM*QTGSMNPCLPTFDF
Trigger: GAAGTCAAACGTGGGAAGACAAGGGTTCATTGACCCGGTCTGCAACATCTTGGACCTCAGAGGCCCAAGTTTCAGCAGCCCGGGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS GCA 72 bp CCGCCATCCTCGATTCTGTCTGAGGCCTTCAAGGCCTaGTGGTACCAGAAGTATATGGAGGGTGTTGTCCGT +
Preference number: 6 (lower is better)
Translates to: PPSSILSEAFKA*WYQKYMEGVVR
Trigger: ACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGATGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000594917.1
ENST00000597969.5
CDS CCA 72 bp CCTCCAATACAGAAATTTGCTTGGGCTGACTGGTCCTaGCCTGAGCCTCTGCAACCCGGGCTGCTGAAACTT +
Preference number: 6 (lower is better)
Translates to: PPIQKFAWADWS*PEPLQPGLLKL
Trigger: AAGTTTCAGCAGCCCGGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 72 bp CTGAGGCAGTTAACGCCTCCAATACAGAAATTTGCTTaGGCTGACTGGTCCTGGCCTGAGCCTCTGCAACCC +
Preference number: 6 (lower is better)
Translates to: LRQLTPPIQKFA*ADWSWPEPLQP
Trigger: GGGTTGCAGAGGCTCAGGCCAGGACCAGTCAGCCCAAGCAAATTTCTGTATTGGAGGCGTTAACTGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CAA 72 bp ATGTTGCACTCAGTCACCTCGCGGAGAACCATGCTTTaGATGTGCTGGGGAAGGCCACTGAGCCAGGCATTG +
Preference number: 6 (lower is better)
Translates to: MLHSVTSRRTML*MCWGRPLSQAL
Trigger: CAATGCCTGGCTCAGTGGCCTTCCCCAGCACATCAAAAGCATGGTTCTCCGCGAGGTGACTGAGTGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 72 bp GAGGTCAGAAGATCGAGACCGTCCTGGCTAACACGGTaGAACCCTGTCTCTGCTTGGCAACCACCAACTGTT +
Preference number: 6 (lower is better)
Translates to: EVRRSRPSWLTR*NPVSAWQPPTV
Trigger: AACAGTTGGTGGTTGCCAAGCAGAGACAGGGTTTCACCGTGTTAGCCAGGACGGTCTCGATCTTCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597969.5
CDS GCA 72 bp CTGGAGTGGAGTAATGATGCCCTGCATAATCCCTATTaGGCTGCTCAGCCCCATGGCCAGCAACATCAGGAA +
Preference number: 6 (lower is better)
Translates to: LEWSNDALHNPY*AAQPHGQQHQE
Trigger: TTCCTGATGTTGCTGGCCATGGGGCTGAGCAGCGCAATAGGGATTATGCAGGGCATCATTACTCCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS CCA 72 bp AGAAGCCCACCTGAGCCAGAATATACTCAGTTTTGCTaGACCAGAACGGACGGGCAAGGAGGACCTCACTCT +
Preference number: 6 (lower is better)
Translates to: RSPPEPEYTQFC*TRTDGQGGPHS
Trigger: AGAGTGAGGTCCTCCTTGCCCGTCCGTTCTGGTCCAGCAAAACTGAGTATATTCTGGCTCAGGTGGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CAA 72 bp CACTGTCAGAAATCACTGTGCCAGTCCATGAGGTGTTaGCCAGCAAGGATGTCGAAGGCTGGGCCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: HCQKSLCQSMRC*PARMSKAGPLS
Trigger: AGACAGAGGCCCAGCCTTCGACATCCTTGCTGGCAAACACCTCATGGACTGGCACAGTGATTTCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CAA 90 bp TTCCTGGGACACTGTCAGAAATCACTGTGCCAGTCCATGAGGTGTTaGCCAGCAAGGATGTCGAAGGCTGGGCCTCTGTCTTCATCTCAC +
Preference number: 6 (lower is better)
Translates to: FLGHCQKSLCQSMRC*PARMSKAGPLSSSH
Trigger: GTGAGATGAAGACAGAGGCCCAGCCTTCGACATCCTTGCTGGCAAACACCTCATGGACTGGCACAGTGATTTCTGACAGTGTCCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS TCA 72 bp AGGCATTGTAGATGGAGGTTGGGTTGTAAAGCAGGTTaGCAGGGGGCTTGGCATCAGGAGGCAGTTTCCCTA +
Preference number: 6 (lower is better)
Translates to: RHCRWRLGCKAG*QGAWHQEAVSL
Trigger: TAGGGAAACTGCCTCCTGATGCCAAGCCCCCTGTCAACCTGCTTTACAACCCAACCTCCATCTACAATGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 72 bp CCAGTAGTCACTCAGCAGTCTGATGAAGTAGCTGCCTaGAGGTCGAGTGAAGAAGAGGCCGCACACGAACAT +
Preference number: 6 (lower is better)
Translates to: PVVTQQSDEVAA*RSSEEEAAHEH
Trigger: ATGTTCGTGTGCGGCCTCTTCTTCACTCGACCTTCAGGCAGCTACTTCATCAGACTGCTGAGTGACTACTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS GCA 72 bp GCAAGGAGGACCTCACTCTCTTTCTTCTCTGTCATCTaGACCTTCTCATGCGTGGGTTTCTGGTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ARRTSLSFFSVI*TFSCVGFWFRA
Trigger: AGCCCTGAACCAGAAACCCACGCATGAGAAGGTGCAGATGACAGAGAAGAAAGAGAGTGAGGTCCTCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 72 bp CCATCCTCGATTCTGTCTGAGGCCTTCAAGGCCTGCTaGTACCAGAAGTATATGGAGGGTGTTGTCCGTTCA +
Preference number: 6 (lower is better)
Translates to: PSSILSEAFKAC*YQKYMEGVVRS
Trigger: TGAACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAGACAGAATCGAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000594917.1
ENST00000597969.5
CDS TCA 72 bp GGAGGCTCACGGTGCTTGAGTCCCAGGACATGTAGGTaGTCGGCTTCATACAAAGATGAACCATCATGGTCA +
Preference number: 6 (lower is better)
Translates to: GGSRCLSPRTCR*SASYKDEPSWS
Trigger: TGACCATGATGGTTCATCTTTGTATGAAGCCGATCACCTACATGTCCTGGGACTCAAGCACCGTGAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454748.7
CDS CCA 72 bp TTCTCTGTCATCTGCACCTTCTCATGCGTGGGTTTCTaGTTCAGGGCTGAGGCAGTTAACGCCTCCAATACA +
Preference number: 6 (lower is better)
Translates to: FSVICTFSCVGF*FRAEAVNASNT
Trigger: TGTATTGGAGGCGTTAACTGCCTCAGCCCTGAACCAGAAACCCACGCATGAGAAGGTGCAGATGACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CCA 72 bp CTGAGGCCTTCAAGGCCTGCTGGTACCAGAAGTATATaGAGGGTGTTGTCCGTTCACATTCAGGATCAAAGC +
Preference number: 6 (lower is better)
Translates to: LRPSRPAGTRSI*RVLSVHIQDQS
Trigger: GCTTTGATCCTGAATGTGAACGGACAACACCCTCCATATACTTCTGGTACCAGCAGGCCTTGAAGGCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000594917.1
ENST00000597969.5
CDS TCA 72 bp CGCCAGAGACAAGATGGCTTCATAGAGAAGCCCACCTaGGCCAGAATATACTCAGTTTTGCTGGACCAGAAC +
Preference number: 6 (lower is better)
Translates to: RQRQDGFIEKPT*ARIYSVLLDQN
Trigger: GTTCTGGTCCAGCAAAACTGAGTATATTCTGGCTCAGGTGGGCTTCTCTATGAAGCCATCTTGTCTCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS TCA 72 bp ACGGAGCCAAGGCCTATGCCTGTGTTAGACAAAACTTaGCCCCCTGCTAGAGACCACACACTCATATTGTAC +
Preference number: 6 (lower is better)
Translates to: TEPRPMPVLDKT*PPARDHTLILY
Trigger: GTACAATATGAGTGTGTGGTCTCTAGCAGGGGGTCAAGTTTTGTCTAACACAGGCATAGGCCTTGGCTCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335875.9
ENST00000454748.7
CDS CAA 72 bp AAACCCTGTCTCTGCTTCCCAGTGGACTTGAGCCCATaGATCATGAAAGCACCAACAAGACACCAGCAAAGA +
Preference number: 6 (lower is better)
Translates to: KPCLCFPVDLSP*IMKAPTRHQQR
Trigger: TCTTTGCTGGTGTCTTGTTGGTGCTTTCATGATCAATGGGCTCAAGTCCACTGGGAAGCAGAGACAGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594917.1
CDS TCA 72 bp AGGATACAGCCATGGTTTCAAATACGACAACGACGATaGTGGGGAAGACTATCCAGTAGTCACTCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: RIQPWFQIRQRR*WGRLSSSHSAV
Trigger: GACTGCTGAGTGACTACTGGATAGTCTTCCCCATCATCGTCGTTGTCGTATTTGAAACCATGGCTGTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335875.9
ENST00000454748.7
ENST00000598221.1
ENST00000598828.1
CDS TCA 72 bp CCTCTTTTGAGGTGCTTGAGTCCCAGGACATGTAGGTaGTCGGCTTCATACAAAGATGAACCATCATGGTCA +
Preference number: 6 (lower is better)
Translates to: PLLRCLSPRTCR*SASYKDEPSWS
Trigger: TGACCATGATGGTTCATCTTTGTATGAAGCCGATCACCTACATGTCCTGGGACTCAAGCACCTCAAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335875.9