RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC6A12 (Homo sapiens)

Ensembl gene IDs: ENSG00000111181

Ensembl transcript IDs: ENST00000359674.8, ENST00000397296.6, ENST00000424061.6, ENST00000535347.5, ENST00000535498.5, ENST00000536116.5, ENST00000536824.5, ENST00000537793.1, ENST00000537826.1, ENST00000538272.5, ENST00000538424.1, ENST00000538580.1, ENST00000540094.1, ENST00000542825.5, ENST00000545058.5, ENST00000684302.1

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTAGCACAAGAGAGGAGTCTGGCCTCCAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAGCAGGATTGTGGCAGGAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: QLAQERSLASSWGCL*LSRGSQQDCGRRQR
Trigger: CCTCTGTCTCCTGCCACAATCCTGCTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACTCCTCTCTTGTGCTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 90 bp AGCAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTC +
Preference number: 1 (lower is better)
Translates to: SNIGLGQRNGQCREA*RVFVKSRNHLPSPF
Trigger: GAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR TCA 90 bp TTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGTaGAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTC +
Preference number: 1 (lower is better)
Translates to: LGRGTDSAGRHAECL*SLGIISQAPSIPML
Trigger: GAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 90 bp TGGAGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCGTTAAGCCTAAGGAAGGATCCCCTA +
Preference number: 1 (lower is better)
Translates to: WRCHERLGGNSRLTA*KGLPLSLSLRKDPL
Trigger: TAGGGGATCCTTCCTTAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR TCA 90 bp TGCCTGGAGCACATTCGGAAGGATTGTGAGGTGGGAAAGAATCTGTaGTCAGTTAGCAATATCGGCCTTGGGCAGAGGAACGGACAGTGC +
Preference number: 1 (lower is better)
Translates to: CLEHIRKDCEVGKNL*SVSNIGLGQRNGQC
Trigger: GCACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAACTGATCACAGATTCTTTCCCACCTCACAATCCTTCCGAATGTGCTCCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 90 bp TTCCATTCCAATGCTCCAGGAGTTGATGAAACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCTGGAGATGCCATGAGAGACTCGGAG +
Preference number: 1 (lower is better)
Translates to: FHSNAPGVDETLQEQ*GTRAGAGDAMRDSE
Trigger: CTCCGAGTCTCTCATGGCATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGCATTGGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 90 bp AGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTaGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCCGTGTAC +
Preference number: 1 (lower is better)
Translates to: SCHFQQGIVPSGSPH*TAVCVPIIAPLPVY
Trigger: GTACACGGGGAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 90 bp TTGTCTCTTTGGTCTCCAGGTTCCTCATCCATGAAGTCAGGGGTTTaGGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTC +
Preference number: 1 (lower is better)
Translates to: LSLWSPGSSSMKSGV*VRSRMANGAAWSTF
Trigger: GAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGAGGAACCTGGAGACCAAAGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 90 bp AAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTaGAGCACATTCGGAAGGATTGTGAGGTGGGAAAGAATCTGTGAT +
Preference number: 1 (lower is better)
Translates to: KSGVCVRSRMANGAA*STFGRIVRWERICD
Trigger: ATCACAGATTCTTTCCCACCTCACAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR TCA 90 bp TTGAAAAAGTCCCTTTGTCTCTTTGGTCTCCAGGTTCCTCATCCATaGAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTG +
Preference number: 1 (lower is better)
Translates to: LKKSLCLFGLQVPHP*SQGFALEAGWQMVL
Trigger: CAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGAGGAACCTGGAGACCAAAGAGACAAAGGGACTTTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGAGTCTGGCCTCCAGCTaGGGGTGCCTGTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQSLASS*GCLWLS
Trigger: GGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACT...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR TCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCAGAGGCTGTCCGCTaGGAATGGAGGGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: APGVDETLQEQCGTRAGAAEAVR*EWRVAL
Trigger: CAGGGCCACCCTCCATTCTCAGCGGACAGCCTCTGC...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGCAGAGGCTGTCCGCTaGGAATGGAGGGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LQELMKHCKNSAELGQELAEAVR*EWRVAL
Trigger: CAGGGCCACCCTCCATTCTCAGCGGACAGCCTCTGC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRSWGCL*LSRGSQ
Trigger: CTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTAGTCTGGCCTCCAGCTaGGGGTGCCTGTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: APGVDETLQEQCGTRAGASLASS*GCLWLS
Trigger: GGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACT...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCG +
Preference number: 2 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVSRLTA*KGLPLS
Trigger: CGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGA...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATAGTCTGGCCTCCAGCTaGGGGTGCCTGTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDSLASS*GCLWLS
Trigger: GGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVGTSQW*CYQQRG
Trigger: TCCCCTTTGCTGATAACACCACCACTGGGACGTGCC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTAGTGGCGTCCCAACATaGCACGTCCCAGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRSGVPT*HVPVVV
Trigger: CACCACCACTGGGACGTGCCATGTTGGGACGCCACT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGAGTGGCGTCCCAACATaGCACGTCCCAGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: RCHERLGGNSRLTACKGLSGVPT*HVPVVV
Trigger: CACCACCACTGGGACGTGCCATGTTGGGACGCCACT...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGGGTGTTGCAATCAGATaGCGGCCTCCAAAAAGACCC +
Preference number: 2 (lower is better)
Translates to: ISALGRGTDSAGRHAECLGVAIR*RPPKRP
Trigger: GGGTCTTTTTGGAGGCCGCCATCTGATTGCAACACC...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR TCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGCAGAGGCTGTCCGCTaGGAATGGAGGGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGILITRGVAIRWRPPKRAEAVR*EWRVAL
Trigger: CAGGGCCACCCTCCATTCTCAGCGGACAGCCTCTGC...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAG +
Preference number: 2 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKSWGCL*LSRGSQ
Trigger: CTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCT...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASGTSQW*CYQQRG
Trigger: TCCCCTTTGCTGATAACACCACCACTGGGACGTGCC...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCCATAACTCGAGGTGTTaGAATCAGATGGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCHNSRC*NQMAAS
Trigger: GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATG...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGTGGCGTCCCAACATaGCACGTCCCAGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKSGVPT*HVPVVV
Trigger: CACCACCACTGGGACGTGCCATGTTGGGACGCCACT...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGGTGTTGCAATCAGATaGCGGCCTCCAAAAAGACCC +
Preference number: 2 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRGVAIR*RPPKRP
Trigger: GGGTCTTTTTGGAGGCCGCCATCTGATTGCAACACC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCT +
Preference number: 2 (lower is better)
Translates to: HERLGGNSRLTACKG*PLSLSLRKDPLTEP
Trigger: AGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTCATAACTCGAGGTGTTaGAATCAGATGGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: APGVDETLQEQCGTRAGAHNSRC*NQMAAS
Trigger: GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATG...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLTLQEQ*GTRAGA
Trigger: AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGT...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDGTSQW*CYQQRG
Trigger: TCCCCTTTGCTGATAACACCACCACTGGGACGTGCC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 90 bp CAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATaGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCCGTGTA +
Preference number: 2 (lower is better)
Translates to: QLSLPTGYCPIRLST*DGSVRSNYSSSPRV
Trigger: TACACGGGGAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 90 bp CTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAA +
Preference number: 2 (lower is better)
Translates to: LRSNTVCSVVTSNRV*SHQALHIGRQCAFQ
Trigger: TTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 90 bp ATTGTGAGGTGGGAAAGAATCTGTGATCAGTTAGCAATATCGGCCTaGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: IVRWERICDQLAISA*GRGTDSAGRHAECL
Trigger: CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAACTGATCACAGATTCTTTCCCACCTCACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGAGTTGATGAAACACTaGAAGAACAGTGCGGAACTA +
Preference number: 2 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVELMKH*KNSAEL
Trigger: TAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCT +
Preference number: 2 (lower is better)
Translates to: SSMKSGVCVRSRMANGAAQCREA*RVFVKS
Trigger: AGACTTCACAAACACTCGGCATGCCTCCCTGCACTG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 90 bp GAAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTG +
Preference number: 2 (lower is better)
Translates to: EGSPNGTSDPTQCVQ*SLPTGYCPIRLSTL
Trigger: CAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGCATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKHGTSQ*WCYQQR
Trigger: CCTTTGCTGATAACACCACCACTGGGACGTGCCATG...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR GCA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGCATTGGACGGCAGTGTaGGTTCCAATTATAGCTCCT +
Preference number: 2 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGHWTAV*VPIIAP
Trigger: AGGAGCTATAATTGGAACGCACACTGCCGTCCAATG...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCACATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPHGTSQ*WCYQQR
Trigger: CCTTTGCTGATAACACCACCACTGGGACGTGCCATG...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTCATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIHGTSQ*WCYQQR
Trigger: CCTTTGCTGATAACACCACCACTGGGACGTGCCATG...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 72 bp CAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGAAGGAGCTGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: QGVASQHGTSQW*CYQQRGRSCSS
Trigger: GCTGGAGCAGCTCCTTCCCCTTTGCTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 72 bp CCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGGGGAAGGAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: PQGVASQHGTSQ*WCYQQRGRSCS
Trigger: GGAGCAGCTCCTTCCCCTTTGCTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp GGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCTAGGAATCATCTCCCA +
Preference number: 3 (lower is better)
Translates to: GLGQRNGQCREA*RVFVKSRNHLP
Trigger: TGGGAGATGATTCCTAGACTTCACAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGATCAGGCTCTCCACATaGGACGGCAGTGTGCGTTCC +
Preference number: 3 (lower is better)
Translates to: LQELMKHCKNSAELGQELIRLST*DGSVRS
Trigger: GGAACGCACACTGCCGTCCAATGTGGAGAGCCTGAT...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp GTTAGCAATATCGGCCTTGGGCAGAGGAACGGACAGTaGAGGGAGGCATGCCGAGTGTTTGTGAAGTCTAGG +
Preference number: 3 (lower is better)
Translates to: VSNIGLGQRNGQ*REACRVFVKSR
Trigger: CCTAGACTTCACAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp TGGTCTCCAGGTTCCTCATCCATGAAGTCAGGGGTTTaGGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: WSPGSSSMKSGV*VRSRMANGAAW
Trigger: CCAGGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGAGGAACCTGGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTAT +
Preference number: 3 (lower is better)
Translates to: ISALGRGTDSAGRHAECLTQCVQ*SLPTGY
Trigger: ATACCCTGTTGGAAGTGACAACTGAACACACTGTGT...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGTTAGCAATATCGGCCTaGGGCAGAGGAACGGACAGT +
Preference number: 3 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLLAISA*GRGTDS
Trigger: ACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAA...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCGTTAAGCCTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: HERLGGNSRLTA*KGLPLSLSLRK
Trigger: CTTCCTTAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp CCTTCCATTCCAATGCTCCAGGAGTTGATGAAACACTaGAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: PSIPMLQELMKH*KNSAELGQELE
Trigger: CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGCATTGGAATGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: SSMKSGVCVRSRMANGAATSNRV*SHQALH
Trigger: GTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGT...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDTSNRV*SHQALH
Trigger: GTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTaGGTTCCAATTATAGCTCCTCTCCCCGTGTACAAA +
Preference number: 3 (lower is better)
Translates to: IVPSGSPHWTAV*VPIIAPLPVYK
Trigger: TTTGTACACGGGGAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR GCA 72 bp AATGCTCCAGGAGTTGATGAAACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCTGGAGATGCCATGAGA +
Preference number: 3 (lower is better)
Translates to: NAPGVDETLQEQ*GTRAGAGDAMR
Trigger: TCTCATGGCATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 72 bp TTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTaGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: FQQGIVPSGSPH*TAVCVPIIAPL
Trigger: GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CCA 72 bp GTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTaGAGCACATTCGGAAGGATTGTGAGGTGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: VCVRSRMANGAA*STFGRIVRWER
Trigger: TCTTTCCCACCTCACAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR-3UTR CAA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTA +
Preference number: 3 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPTACKG*PLSLSL
Trigger: TAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGT...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR TCA 72 bp TCCCTTTGTCTCTTTGGTCTCCAGGTTCCTCATCCATaGAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAA +
Preference number: 3 (lower is better)
Translates to: SLCLFGLQVPHP*SQGFALEAGWQ
Trigger: TTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGAGGAACCTGGAGACCAAAGAGACAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR TCA 72 bp CACATTCGGAAGGATTGTGAGGTGGGAAAGAATCTGTaGTCAGTTAGCAATATCGGCCTTGGGCAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: HIRKDCEVGKNL*SVSNIGLGQRN
Trigger: GTTCCTCTGCCCAAGGCCGATATTGCTAACTGATCACAGATTCTTTCCCACCTCACAATCCTTCCGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCCTCCTTCCACCTTGCTaGGCACCACCTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSLLPPC*APPASP
Trigger: AGGGGAAGCAGGTGGTGCCCAGCAAGGTGGAAGGAG...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR CCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGGCTGTGTGGTGGGTTaGGAAGCCCCGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVGCVVG*EAPLGG
Trigger: CCCACCCAGCGGGGCTTCCCAACCCACCACACAGCC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCCCAGGAACCAGCCAATaGAGTATCCCCAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSPGTSQ*SIPRAG
Trigger: ACCCGCCCTGGGGATACTCCATTGGCTGGTTCCTGG...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCCCTTCCCACAGGGAGTaGCGTCCCAACATGGCACGT +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSPSHRE*RPNMAR
Trigger: ACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCTTGCTGGGCACCACCTaGTTCCCCTCCCCTCGTCAG +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVILLGTT*FPSPRQ
Trigger: CTGACGAGGGGAGGGGAAGCAGGTGGTGCCCAGCAA...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR GCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGCCCACACTCTTGCACTaGCACCTTCCCGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWPTLLH*HLPVHG
Trigger: GCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGG...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCCCGCTCTTCCGGAGCTaGCTGGGGAACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSPLFRS*LGNMSM
Trigger: CATAGACATGTTCCCCAGGCAGCTCCGGAAGAGCGG...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGCCTTGGCTGGTGTATTaGCCCAACGCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWPWLVY*PNATSR
Trigger: CCTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGG...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCCAGTCCTTCCCTTGTTaGGGAGGGCCCAAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSQSFPC*GGPKVP
Trigger: CGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTG...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGAGTGGCGTCCCAACATaGCACGTCCCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWSGVPT*HVPVVV
Trigger: CACCACCACTGGGACGTGCCATGTTGGGACGCCACT...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGCCTCCCCTCGTCAGATaGCCACCCCTGCTTTCACCC +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQPPLVR*PPLLSP
Trigger: GGGTGAAAGCAGGGGTGGTCATCTGACGAGGGGAGG...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR TCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGCATGGATGCCCGAGGTaGTGCCCAGAACTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWHGCPR*CPELVS
Trigger: AGAGACGAGTTCTGGGCATCACCTCGGGCATCCATG...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCTCAGGGGTGATGAGCTaGCGCAGACGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSSGVMS*RRRFLK
Trigger: TTTCAGGAAGCGTCTGCGTCAGCTCATCACCCCTGA...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGGGGGACCCAGGAGACTaGAGGAGGCCCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLGDPGD*RRPTLL
Trigger: CAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCC...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGGGGGACCCAGGAGACTaGAGGAGGCCCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQGDPGD*RRPTLL
Trigger: CAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCC...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGCCGCTCTTCCGGAGCTaGCTGGGGAACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWPLFRS*LGNMSM
Trigger: CATAGACATGTTCCCCAGGCAGCTCCGGAAGAGCGG...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGTCCATGGCTGTGTGGTaGGTTGGGAAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQSMAVW*VGKPRW
Trigger: CCAGCGGGGCTTCCCAACCCACCACACAGCCATGGA...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGAGCCGCCTGGCCTCTaGCCACACCCTACAAATGGG +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVEPPGL*PHPTNG
Trigger: CCCATTTGTAGGGTGTGGCCAGAGGCCAGGCGGCTC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCTCAGGCTCTCCACATTaGACGGCAGTGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSSGSPH*TAVCVP
Trigger: TGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGA...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCGACGCAGACGCTTCCTaGAAGGACCCCGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVIDADAS*KDPESS
Trigger: TGAAGACTCGGGGTCCTTTCAGGAAGCGTCTGCGTC...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGGAGGAAACTCCAGACTaGCGGCATGCAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWEETPD*RHAKAC
Trigger: GCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTC...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGGCTGTGTGGTGGGTTaGGAAGCCCCGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLGCVVG*EAPLGG
Trigger: CCCACCCAGCGGGGCTTCCCAACCCACCACACAGCC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGCCACCTTCCCGTCCATaGCTGTGTGGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQPPSRP*LCGGLG
Trigger: TCCCAACCCACCACACAGCCATGGACGGGAAGGTGG...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAGTCTGGCCTCCAGCTaGGGGTGCCTGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASSLASS*GCLWLS
Trigger: GGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACT...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWGTSQW*CYQQRG
Trigger: TCCCCTTTGCTGATAACACCACCACTGGGACGTGCC...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCGCGTTAGAAGCAGGATaGCAAATGGTGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSALEAG*QMVLPG
Trigger: TCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCCTTGGGGAAGGCGATaGAGGCCAGCCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELPWGRR*RPAQDL
Trigger: CAGGTCCTGGGCTGGCCTTCATCGCCTTCCCCAAGG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGGGAAGCAGAGGGCGATaGAGTCCTTGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWGSRGR*SPCSSC
Trigger: ACAACTGCTACAAGGACTGCATCGCCCTCTGCTTCC...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGGCAGGAGCTGGAGATaGCATGAGAGACTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVGRSWR*HERLGG
Trigger: TCCTCCGAGTCTCTCATGGCATCTCCAGCTCCTGCC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGGATGGCAAATGGTGCTaGCTGGAGCACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWDGKWC*LEHIRK
Trigger: CTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATC...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCGTCCATGGCTGTGTaGTGGGTTGGGAAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLPSMAV*WVGKPR
Trigger: GCGGGGCTTCCCAACCCACCACACAGCCATGGACGG...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGGGAACATGTCTATaGAGGCTGTCACCAGGCACT +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWWGTCL*RLSPGT
Trigger: AGTGCCTGGTGACAGCCTCCATAGACATGTTCCCCA...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCTCTTCCGGAGCTGCCTaGGGAACATGTCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVISSGAA*GTCLWR
Trigger: CCTCCATAGACATGTTCCCCAGGCAGCTCCGGAAGA...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGAGCCGCCTGGCCTCTaGCCACACCCTACAAATGGG +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVREPPGL*PHPTNG
Trigger: CCCATTTGTAGGGTGTGGCCAGAGGCCAGGCGGCTC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCGGCTTAGGAGCCGCCTaGCCTCTGGCCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESGLGAA*PLATPY
Trigger: GTAGGGTGTGGCCAGAGGCCAGGCGGCTCCTAAGCC...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGGCTTAGGAGCCGCCTaGCCTCTGGCCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCGLGAA*PLATPY
Trigger: GTAGGGTGTGGCCAGAGGCCAGGCGGCTCCTAAGCC...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGAGTCTGGCCTCCAGCTaGGGGTGCCTGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELSLASS*GCLWLS
Trigger: GGAGAGCCACAGGCACCCCCAGCTGGAGGCCAGACT...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGACACCTGAGGGTCCTTaGGGCGGAACAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQTPEGP*GGTNLA
Trigger: AGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGTGT...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCGGCCAGCCCAGGACCTaGCTCGGCCACTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASGQPRT*LGHFRN
Trigger: ATTTCTGAAGTGGCCGAGTCAGGTCCTGGGCTGGCC...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAACCTTGGGGAAGGCGATaGAGGCCAGCCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKPWGRR*RPAQDL
Trigger: CAGGTCCTGGGCTGGCCTTCATCGCCTTCCCCAAGG...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGTCAGGGGTGATGAGCTaGCGCAGACGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLSGVMS*RRRFLK
Trigger: TTTCAGGAAGCGTCTGCGTCAGCTCATCACCCCTGA...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGCCTGCTTTCACCCACTaGCGTGACCAGCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLPAFTH*RDQLPI
Trigger: GATGGGCAGCTGGTCACGGCAGTGGGTGAAAGCAGG...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR GCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGGAGGCCCACACTCTTaGACTGCCACCTTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLGGPHS*TATFPS
Trigger: GGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGGCCCACACTCTTaGACTGCCACCTTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGAGGPHS*TATFPS
Trigger: GGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCC...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGGGGACCCAGGAGACTaGAGGAGGCCCACACTCTTG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLGDPGD*RRPTLL
Trigger: CAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCGGAACAGCAGGCATATaGCACTGGAAGCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSGTAGI*HWKHSS
Trigger: ACTACTATGCTTCCAGTGGCATATGCCTGCTGTTCC...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTAGTTCCGGCCAGCACTaGCATCCAAGCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVSSGQH*HPSRDV
Trigger: AACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACT...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTATTTATTGCAGTTCCTaGGCCCTCGGGAATGCCCCG +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVIYCSS*ALGNAP
Trigger: CGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAAT...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTCCCCGATCCTTCACCTaGTCCTCGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRPRSFT*SSSSWS
Trigger: GGACCAGGAAGACGAGGACCAGGTGAAGGATCGGGG...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCCCTTGGCTGGTGTATTaGCCCAACGCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASPWLVY*PNATSR
Trigger: CCTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGG...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGGTGCCGGCTCCTGAGTaGTTCAGAAAGTCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQVPAPE*FRKSVQ
Trigger: TTGCACGGACTTTCTGAACCACTCAGGAGCCGGCAC...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGAGGGAGCCCAGGTCATaGATGCCCGAGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLREPRS*MPEVMP
Trigger: GGGCATCACCTCGGGCATCCATGACCTGGGCTCCCT...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGATGTTGCTTGGGCTGTaGCAGACTGGAGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLMLLGL*QTGVRG
Trigger: ACCCCTGACTCCAGTCTGCCACAGCCCAAGCAACAT...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGAGCCGCCTGGCCTCTaGCCACACCCTACAAATGGG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLEPPGL*PHPTNG
Trigger: CCCATTTGTAGGGTGTGGCCAGAGGCCAGGCGGCTC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCGGGAGCCAGCAGCTCTaGGCAGCTGATTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASGSQQL*AADWEE
Trigger: TTCCTCCCAATCAGCTGCCCAGAGCTGCTGGCTCCC...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397296.6
CDS-3UTR CCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGGCCGAAGTGACTGCATaGTTCTCTCCTAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLAEVTA*FSPSQL
Trigger: CAGCTGGCTAGGAGAGAACCATGCAGTCACTTCGGC...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAGCTGGGTGGGCAGGATaGCGAGGGCCAAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKAGWAG*RGPKPR
Trigger: TCTTGGCTTTGGCCCTCGTCATCCTGCCCACCCAGC...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR TCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCTGCAGAAATAGCAGATaGCCCAGGCGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASCRNSR*PRRAGG
Trigger: GCCTCCTGCTCGCCTGGGTCATCTGCTATTTCTGCA...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCATCCATCCACACCTaGGGGTCCTTGAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGAASIHT*GSLRRN
Trigger: GTTCCGCCTCAAGGACCCTCAGGTGTGGATGGATGC...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGGGCCAGCCCAGGACCTaGCTCGGCCACTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: QELMKHCKNSAELGQELEGQPRT*LGHFRN
Trigger: ATTTCTGAAGTGGCCGAGTCAGGTCCTGGGCTGGCC...CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGCCTTGGGGAAGGCGATaGAGGCCAGCCCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKPWGRR*RPAQDL
Trigger: CAGGTCCTGGGCTGGCCTTCATCGCCTTCCCCAAGG...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTGCAGAGGCTGTCCGCTaGGAATGGAGGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIAAEAVR*EWRVAL
Trigger: CAGGGCCACCCTCCATTCTCAGCGGACAGCCTCTGC...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGCATGCCGAGTGTTTGTaGAGTCTAGGAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWHAECL*SLGIIS
Trigger: GGAGATGATTCCTAGACTTCACAAACACTCGGCATG...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCGTGGGAAAGAATCTGTaGTCAGTTAGCAATATCGGC +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSVGKNL*SVSNIG
Trigger: GCCGATATTGCTAACTGATCACAGATTCTTTCCCAC...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCTGGGCCCTCGGGAATaGCCCGAGGTTTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAALGPRE*PEVSPV
Trigger: GACAGGAGAAACCTCGGGGCATTCCCGAGGGCCCAG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR GCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCCCCACACTCTTGCACTaGCACCTTCCCGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESPTLLH*HLPVHG
Trigger: GCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGG...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGCTCGATGACCACAGATaGCAGACCAATGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQLDDHR*QTNALE
Trigger: TTCCAGGGCATTGGTCTGGCATCTGTGGTCATCGAG...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGCTCGATGACCACAGATaGCAGACCAATGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLLDDHR*QTNALE
Trigger: TTCCAGGGCATTGGTCTGGCATCTGTGGTCATCGAG...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCGGTTCAGAAAGTCCGTaGAATGCTCTGTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSGSESP*NALCSK
Trigger: TTTGGAACACAGAGCATTGCACGGACTTTCTGAACC...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGGCAGGAGCTGGAGATaGCATGAGAGACTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCGRSWR*HERLGG
Trigger: TCCTCCGAGTCTCTCATGGCATCTCCAGCTCCTGCC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCAGAGGAACGGACAGTaGAGGGAGGCATGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLQRNGQ*REACRV
Trigger: CACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTG...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGGATGGCAAATGGTGCTaGCTGGAGCACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLDGKWC*LEHIRK
Trigger: CTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATC...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGTCCATGGCTGTGTGGTaGGTTGGGAAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQSMAVW*VGKPRW
Trigger: CCAGCGGGGCTTCCCAACCCACCACACAGCCATGGA...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCACCTTCCCGTCCATaGCTGTGTGGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLPPSRP*LCGGLG
Trigger: TCCCAACCCACCACACAGCCATGGACGGGAAGGTGG...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCCCCCGATCCTTCACCTaGTCCTCGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESPRSFT*SSSSWS
Trigger: GGACCAGGAAGACGAGGACCAGGTGAAGGATCGGGG...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCCCGATCCTTCACCTaGTCCTCGTCTTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLPRSFT*SSSSWS
Trigger: GGACCAGGAAGACGAGGACCAGGTGAAGGATCGGGG...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCCTTGGCTGGTGTATTaGCCCAACGCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELPWLVY*PNATSR
Trigger: CCTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATAGGGAGCCCAGGTCATaGATGCCCGAGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDREPRS*MPEVMP
Trigger: GGGCATCACCTCGGGCATCCATGACCTGGGCTCCCT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCTCCACACAGACAAACTaGCTGTCCAGCCCTAGGAAT +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVISTQTN*LSSPRN
Trigger: ATTCCTAGGGCTGGACAGCCAGTTTGTCTGTGTGGA...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCCAGGAACCAGCCAATaGAGTATCCCCAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELPGTSQ*SIPRAG
Trigger: ACCCGCCCTGGGGATACTCCATTGGCTGGTTCCTGG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGCCAGGAACCAGCCAATaGAGTATCCCCAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLPGTSQ*SIPRAG
Trigger: ACCCGCCCTGGGGATACTCCATTGGCTGGTTCCTGG...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCGCCACACCCTACAAATaGGTCTCCTTCTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASATPYK*VSFSPA
Trigger: AGCCGGGGAGAAGGAGACCCATTTGTAGGGTGTGGC...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGCCACACCCTACAAATaGGTCTCCTTCTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCATPYK*VSFSPA
Trigger: AGCCGGGGAGAAGGAGACCCATTTGTAGGGTGTGGC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKSWGCL*LSRGSQ
Trigger: CTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCT...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDSWGCL*LSRGSQ
Trigger: CTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGAGTGGCGTCCCAACATaGCACGTCCCAGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QELMKHCKNSAELGQELESGVPT*HVPVVV
Trigger: CACCACCACTGGGACGTGCCATGTTGGGACGCCACT...CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCCTCAGCCTAGCCTCTaGCCTCCAGGTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLPQPSL*PPGQKG
Trigger: TCCCTTCTGACCTGGAGGCCAGAGGCTAGGCTGAGG...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTCACTGTGCCGGCTCCTaGGTGGTTCAGAAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCHCAGS*VVQKVR
Trigger: ACGGACTTTCTGAACCACTCAGGAGCCGGCACAGTG...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCACTGTGCCGGCTCCTaGGTGGTTCAGAAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLHCAGS*VVQKVR
Trigger: ACGGACTTTCTGAACCACTCAGGAGCCGGCACAGTG...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCCATGGATGCCCGAGGTaGTGCCCAGAACTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESHGCPR*CPELVS
Trigger: AGAGACGAGTTCTGGGCATCACCTCGGGCATCCATG...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGGCTTCAAGTAGTAGATaGTGCCCTGGTAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLASSSR*CPGRLR
Trigger: CCGGAGCCTACCAGGGCATCATCTACTACTTGAAGC...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGCTTCAAGTAGTAGATaGTGCCCTGGTAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRASSSR*CPGRLR
Trigger: CCGGAGCCTACCAGGGCATCATCTACTACTTGAAGC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAGCATCCATCCACACCTaGGGGTCCTTGAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKASIHT*GSLRRN
Trigger: GTTCCGCCTCAAGGACCCTCAGGTGTGGATGGATGC...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGCAGAGGCTGTCCGCTaGGAATGGAGGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIAEAVR*EWRVAL
Trigger: CAGGGCCACCCTCCATTCTCAGCGGACAGCCTCTGC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGGAGGAAACTCCAGACTaGCGGCATGCAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLEETPD*RHAKAC
Trigger: GCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTC...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGAGCTGGAGATGCCATaGGAGACTCGGAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRELEMP*ETRRKL
Trigger: GAGTTTCCTCCGAGTCTCTCATGGCATCTCCAGCTC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCCATTCGGAAGGATTGTaGGGTGGGAAAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVIHSEGL*GGKESV
Trigger: CACAGATTCTTTCCCACCTCACAATCCTTCCGAATG...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCCAGGTGTGGCCGAAGTaGCTGCATGGTTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASQVWPK*LHGSLL
Trigger: TAGGAGAGAACCATGCAGTCACTTCGGCCACACCTG...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCTTGATGTCTGCTGAGTaGCCTCAGCCTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASLMSAE*PQPSLW
Trigger: CCAGAGGCTAGGCTGAGGTCACTCAGCAGACATCAA...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCGGAGGCCCACACTCTTaGACTGCCACCTTCCCGTCC +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFGGPHS*TATFPS
Trigger: GGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCC...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTCAGATGCCAGACCAATaGCCTGGAAGAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCQMPDQ*PGRGGR
Trigger: TCTGCCCCCTCTTCCAGGGCATTGGTCTGGCATCTG...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCTCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCSRLTA*KGLPLS
Trigger: CGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGA...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCAGAGGAACGGACAGTaGAGGGAGGCATGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAAQRNGQ*REACRV
Trigger: CACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGTCCATGGCTGTGTGGTaGGTTGGGAAGCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKSMAVW*VGKPRW
Trigger: CCAGCGGGGCTTCCCAACCCACCACACAGCCATGGA...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCACCGTCCATGGCTGTGTaGTGGGTTGGGAAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPPSMAV*WVGKPR
Trigger: GCGGGGCTTCCCAACCCACCACACAGCCATGGACGG...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGACCGTCCATGGCTGTGTaGTGGGTTGGGAAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRPSMAV*WVGKPR
Trigger: GCGGGGCTTCCCAACCCACCACACAGCCATGGACGG...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCGCTGTGACACTCCCTTaGCTGGTGTATTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASAVTLP*LVYWPN
Trigger: GTTGGGCCAATACACCAGCCAAGGGAGTGTCACAGC...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCCAGACCAATGCCCTaGAAGAGGGGGCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGAARPMP*KRGQIF
Trigger: GAAGATCTGCCCCCTCTTCCAGGGCATTGGTCTGGC...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCGCCAGACCAATGCCCTaGAAGAGGGGGCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLARPMP*KRGQIF
Trigger: GAAGATCTGCCCCCTCTTCCAGGGCATTGGTCTGGC...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGCCGGCTCCTGAGTaGTTCAGAAAGTCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCVPAPE*FRKSVQ
Trigger: TTGCACGGACTTTCTGAACCACTCAGGAGCCGGCAC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTAGGAGAAGAGGAAAGTaGCCAGGCAAAGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRRRRGK*PGKVQG
Trigger: CCCCTGGACTTTGCCTGGCCACTTTCCTCTTCTCCT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCATGTTGCTTGGGCTGTaGCAGACTGGAGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCMLLGL*QTGVRG
Trigger: ACCCCTGACTCCAGTCTGCCACAGCCCAAGCAACAT...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCAGCAGGGATGTTGCTTaGGCTGTGGCAGACTGGAGT +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCSRDVA*AVADWS
Trigger: ACTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCT...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCCAGTCCTTCCCTTGTTaGGGAGGGCCCAAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESQSFPC*GGPKVP
Trigger: CGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTG...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTCAGTCCTTCCCTTGTTaGGGAGGGCCCAAAGTTCCG +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGAQSFPC*GGPKVP
Trigger: CGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTG...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGGCTTAGGAGCCGCCTaGCCTCTGGCCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQGLGAA*PLATPY
Trigger: GTAGGGTGTGGCCAGAGGCCAGGCGGCTCCTAAGCC...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGGCAAATGGTGCTGCCTaGAGCACATTCGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQANGAA*STFGRI
Trigger: AATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGC...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGCCTCAGCCTAGCCTCTaGCCTCCAGGTCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQPQPSL*PPGQKG
Trigger: TCCCTTCTGACCTGGAGGCCAGAGGCTAGGCTGAGG...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGCACTGTGCCGGCTCCTaGGTGGTTCAGAAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQHCAGS*VVQKVR
Trigger: ACGGACTTTCTGAACCACTCAGGAGCCGGCACAGTG...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAACATGGATGCCCGAGGTaGTGCCCAGAACTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKHGCPR*CPELVS
Trigger: AGAGACGAGTTCTGGGCATCACCTCGGGCATCCATG...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATTGCAGAAATAGCAGATaGCCCAGGCGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDCRNSR*PRRAGG
Trigger: GCCTCCTGCTCGCCTGGGTCATCTGCTATTTCTGCA...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTGCAGAAATAGCAGATaGCCCAGGCGAGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGCRNSR*PRRAGG
Trigger: GCCTCCTGCTCGCCTGGGTCATCTGCTATTTCTGCA...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGACACCTGAGGGTCCTTaGGGCGGAACAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLTPEGP*GGTNLA
Trigger: AGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGTGT...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAACATCCCGCCCTCGGTaGCCAGGAAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKTSRPR*PGKALS
Trigger: TGATAGGGCTTTTCCTGGTCACCGAGGGCGGGATGT...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCTCAGGGGTGATGAGCTaGCGCAGACGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLSGVMS*RRRFLK
Trigger: TTTCAGGAAGCGTCTGCGTCAGCTCATCACCCCTGA...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGCTGGAGATGCCATaGGAGACTCGGAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELELEMP*ETRRKL
Trigger: GAGTTTCCTCCGAGTCTCTCATGGCATCTCCAGCTC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGCATTCGGAAGGATTGTaGGGTGGGAAAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLHSEGL*GGKESV
Trigger: CACAGATTCTTTCCCACCTCACAATCCTTCCGAATG...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGTTGATGTCTGCTGAGTaGCCTCAGCCTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELLMSAE*PQPSLW
Trigger: CCAGAGGCTAGGCTGAGGTCACTCAGCAGACATCAA...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGATCTGCCCAGGTCCTTaGTGTCTGCTGAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLICPGP*CLLSDL
Trigger: GAGGTCACTCAGCAGACATCAAGGACCTGGGCAGAT...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAACTGCCGTGACCAGCTaGCCATCGCTGGACTTTCCT +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKTAVTS*PSLDFP
Trigger: AGGAAAGTCCAGCGATGGGCAGCTGGTCACGGCAGT...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR GCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGCCCACACTCTTGCACTaGCACCTTCCCGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKPTLLH*HLPVHG
Trigger: GCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGG...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGCAGATGCCAGACCAATaGCCTGGAAGAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQQMPDQ*PGRGGR
Trigger: TCTGCCCCCTCTTCCAGGGCATTGGTCTGGCATCTG...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCGGTTCAGAAAGTCCGTaGAATGCTCTGTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVIGSESP*NALCSK
Trigger: TTTGGAACACAGAGCATTGCACGGACTTTCTGAACC...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTCAAATGGGGTCACTGTaGCGGCTCCTGAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCQMGSL*RLLSGS
Trigger: TGAACCACTCAGGAGCCGGCACAGTGACCCCATTTG...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGCATAACTCGAGGTGTTaGAATCAGATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLHNSRC*NQMAAS
Trigger: GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATG...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTCATTGGACGGCAGTGTaGGTTCCAATTATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVHWTAV*VPIIAP
Trigger: AGGAGCTATAATTGGAACGCACACTGCCGTCCAATG...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGCAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLQCREA*RVFVKS
Trigger: AGACTTCACAAACACTCGGCATGCCTCCCTGCACTG...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCAGGATGGCAAATGGTaGTGCCTGGAGCACATTCGG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELQDGKW*CLEHIR
Trigger: CCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGAAGGGATCAAAGCCTaGCGAGGTAGCAAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCEGIKA*RGSKGQ
Trigger: TTGACCCTTGCTACCTCGGCAGGCTTTGATCCCTTC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCATCTTGTTGGTCCATTaGCCCCGATCCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASILLVH*PRSFTW
Trigger: CCAGGTGAAGGATCGGGGCCAATGGACCAACAAGAT...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGCTGTGACACTCCCTTaGCTGGTGTATTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELAVTLP*LVYWPN
Trigger: GTTGGGCCAATACACCAGCCAAGGGAGTGTCACAGC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGGTGCCGGCTCCTGAGTaGTTCAGAAAGTCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLVPAPE*FRKSVQ
Trigger: TTGCACGGACTTTCTGAACCACTCAGGAGCCGGCAC...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAAGGGAGCCCAGGTCATaGATGCCCGAGGTGATGCCC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPREPRS*MPEVMP
Trigger: GGGCATCACCTCGGGCATCCATGACCTGGGCTCCCT...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTATGTTGCTTGGGCTGTaGCAGACTGGAGTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCMLLGL*QTGVRG
Trigger: ACCCCTGACTCCAGTCTGCCACAGCCCAAGCAACAT...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGGGCACGTCCCAGTGGTaGTGTTATCAGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLGTSQW*CYQQRG
Trigger: TCCCCTTTGCTGATAACACCACCACTGGGACGTGCC...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGCATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLHGTSQ*WCYQQR
Trigger: CCTTTGCTGATAACACCACCACTGGGACGTGCCATG...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCCTTCCCACAGGGAGTaGCGTCCCAACATGGCACGT +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFPSHRE*RPNMAR
Trigger: ACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGGGTGTTGCAATCAGATaGCGGCCTCCAAAAAGACCC +
Preference number: 4 (lower is better)
Translates to: HERLGGNSRLTACKGLPLGVAIR*RPPKRP
Trigger: GGGTCTTTTTGGAGGCCGCCATCTGATTGCAACACC...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGAGGCATCCCCACAGTaGAATCCTCATAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVREASPQ*NPHNSR
Trigger: CCTCGAGTTATGAGGATTCCACTGTGGGGATGCCTC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGAGGCATCCCCACAGTaGAATCCTCATAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCEASPQ*NPHNSR
Trigger: CCTCGAGTTATGAGGATTCCACTGTGGGGATGCCTC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGTCAGGCTCTCCACATTaGACGGCAGTGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELSGSPH*TAVCVP
Trigger: TGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGA...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGTCAGGCTCTCCACATTaGACGGCAGTGTGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: QELMKHCKNSAELGQELESGSPH*TAVCVP
Trigger: TGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGA...CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCTTAATGGGAAGACACTaGCCTGAGCACAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: PSHREWRPNMARPSGGVILMGRH*PEHKEI
Trigger: TATCTCCTTGTGCTCAGGCCAGTGTCTTCCCATTAA...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000397296.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGCCGAAGTGACTGCATaGTTCTCTCCTAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELAEVTA*FSPSQL
Trigger: CAGCTGGCTAGGAGAGAACCATGCAGTCACTTCGGC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTTCCCTGTGTGCATaGCACCAAAACCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCVSLCA*HQNLAL
Trigger: GAGAGCCAGGTTTTGGTGCCATGCACACAGGGAAAC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424061.6
3UTR CAA 72 bp CTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTAAGGAAGGATCCCCTA +
Preference number: 4 (lower is better)
Translates to: LGGNSRLTACKG*PLSLSLRKDPL
Trigger: TAGGGGATCCTTCCTTAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTATCACACCCCCTCTCTaGACTCTAAGTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRITPPL*TLSFPV
Trigger: CACAGGGAAACTTAGAGTTCAGAGAGGGGGTGTGAT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000424061.6
CDS-3UTR TCA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGGCTTCAAGTAGTAGATaGTGCCCTGGTAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGASSSR*CPGRLR
Trigger: CCGGAGCCTACCAGGGCATCATCTACTACTTGAAGC...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGCATCCATCCACACCTaGGGGTCCTTGAGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIASIHT*GSLRRN
Trigger: GTTCCGCCTCAAGGACCCTCAGGTGTGGATGGATGC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGCCAGCCCAGGACCTaGCTCGGCCACTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIGQPRT*LGHFRN
Trigger: ATTTCTGAAGTGGCCGAGTCAGGTCCTGGGCTGGCC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTACATCCCGCCCTCGGTaGCCAGGAAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIATSRPR*PGKALS
Trigger: TGATAGGGCTTTTCCTGGTCACCGAGGGCGGGATGT...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTGACGCAGACGCTTCCTaGAAGGACCCCGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIADADAS*KDPESS
Trigger: TGAAGACTCGGGGTCCTTTCAGGAAGCGTCTGCGTC...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGAGGAAACTCCAGACTaGCGGCATGCAAAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDEETPD*RHAKAC
Trigger: GCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGTGGGAAAGAATCTGTaGTCAGTTAGCAATATCGGC +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVVGKNL*SVSNIG
Trigger: GCCGATATTGCTAACTGATCACAGATTCTTTCCCAC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGGAAGAACACCGGGATaGCGCAGACAAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCGRTPG*RRQRRR
Trigger: TCTTCTTCTTTGTCTGCGGCATCCCGGTGTTCTTCC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCAGATGCCAGACCAATaGCCTGGAAGAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIAQMPDQ*PGRGGR
Trigger: TCTGCCCCCTCTTCCAGGGCATTGGTCTGGCATCTG...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCTGTTCCAAAAGTTGTTaGAGGTCGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASCSKSC*RSSRAA
Trigger: AGCTGCCCTGGACGACCTGCAACAACTTTTGGAACA...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCGGAAGCAGAGGGCGATaGAGTCCTTGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESGSRGR*SPCSSC
Trigger: ACAACTGCTACAAGGACTGCATCGCCCTCTGCTTCC...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCAGTTCCGGCCAGCACTaGCATCCAAGCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAASSGQH*HPSRDV
Trigger: AACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACT...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTCATAACTCGAGGTGTTaGAATCAGATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCHNSRC*NQMAAS
Trigger: GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATG...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAATCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKSRLTA*KGLPLS
Trigger: CGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGA...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCTLQEQ*GTRAGA
Trigger: AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGT...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELQCREA*RVFVKS
Trigger: AGACTTCACAAACACTCGGCATGCCTCCCTGCACTG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGCAGAGGAACGGACAGTaGAGGGAGGCATGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQQRNGQ*REACRV
Trigger: CACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTG...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGATGGCAAATGGTGCTaGCTGGAGCACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCDGKWC*LEHIRK
Trigger: CTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATC...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGCAGGATGGCAAATGGTaGTGCCTGGAGCACATTCGG +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQQDGKW*CLEHIR
Trigger: CCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTG...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAACAGGATGGCAAATGGTaGTGCCTGGAGCACATTCGG +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKQDGKW*CLEHIR
Trigger: CCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTG...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGACCAGCTGCCCATCGCTaGACTTTCCTGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRPAAHR*TFLLHR
Trigger: CCTGTGGAGCAGGAAAGTCCAGCGATGGGCAGCTGG...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCACCACCTTCCCGTCCATaGCTGTGTGGTGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPPPSRP*LCGGLG
Trigger: TCCCAACCCACCACACAGCCATGGACGGGAAGGTGG...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTATCTTGTTGGTCCATTaGCCCCGATCCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCILLVH*PRSFTW
Trigger: CCAGGTGAAGGATCGGGGCCAATGGACCAACAAGAT...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAGCTGTGACACTCCCTTaGCTGGTGTATTGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKAVTLP*LVYWPN
Trigger: GTTGGGCCAATACACCAGCCAAGGGAGTGTCACAGC...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGTGGGGAACATGTCTATaGAGGCTGTCACCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLWGTCL*RLSPGT
Trigger: AGTGCCTGGTGACAGCCTCCATAGACATGTTCCCCA...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATAGGAGAAGAGGAAAGTaGCCAGGCAAAGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDRRRGK*PGKVQG
Trigger: CCCCTGGACTTTGCCTGGCCACTTTCCTCTTCTCCT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGAGCAGGGATGTTGCTTaGGCTGTGGCAGACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQSRDVA*AVADWS
Trigger: ACTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCT...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTGCCACACCCTACAAATaGGTCTCCTTCTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIAATPYK*VSFSPA
Trigger: AGCCGGGGAGAAGGAGACCCATTTGTAGGGTGTGGC...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATAAGCTGGGGGTGCCTGTaGCTCTCCAGAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILISWGCL*LSRGSQ
Trigger: CTGGGAACCTCTGGAGAGCCACAGGCACCCCCAGCT...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTCCTTCCCACAGGGAGTaGCGTCCCAACATGGCACGT +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIPSHRE*RPNMAR
Trigger: ACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCGGTGTTGCAATCAGATaGCGGCCTCCAAAAAGACCC +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLGVAIR*RPPKRP
Trigger: GGGTCTTTTTGGAGGCCGCCATCTGATTGCAACACC...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGCGTTAGAAGCAGGATaGCAAATGGTGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLALEAG*QMVLPG
Trigger: TCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGGCGTTAGAAGCAGGATaGCAAATGGTGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLALEAG*QMVLPG
Trigger: TCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGTCCCTTTGTCTCTTTaGTCTCCAGGTTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRVPLSL*SPGSSS
Trigger: GGATGAGGAACCTGGAGACCAAAGAGACAAAGGGAC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGACGGAAACGTGGCTGTaGAATAAACCACCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELTETWL*NKPPCL
Trigger: CAGGCAAGGTGGTTTATTTCACAGCCACGTTTCCGT...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTACGGAAACGTGGCTGTaGAATAAACCACCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCTETWL*NKPPCL
Trigger: CAGGCAAGGTGGTTTATTTCACAGCCACGTTTCCGT...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGACGGAAACGTGGCTGTaGAATAAACCACCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLTETWL*NKPPCL
Trigger: CAGGCAAGGTGGTTTATTTCACAGCCACGTTTCCGT...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTATCTGCCCAGGTCCTTaGTGTCTGCTGAGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIAICPGP*CLLSDL
Trigger: GAGGTCACTCAGCAGACATCAAGGACCTGGGCAGAT...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCGCTGGGTCTCTAACTTaGTGTGTGACCTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESAGSLT*CVTSGK
Trigger: TTTGCCTGAGGTCACACAGCAAGTTAGAGACCCAGC...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000424061.6
CDS-3UTR GCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGGAAGAACACCGGGATaGCGCAGACAAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELGRTPG*RRQRRR
Trigger: TCTTCTTCTTTGTCTGCGGCATCCCGGTGTTCTTCC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCGGAAGAACACCGGGATaGCGCAGACAAAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLGRTPG*RRQRRR
Trigger: TCTTCTTCTTTGTCTGCGGCATCCCGGTGTTCTTCC...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCTCGATGACCACAGATaGCAGACCAATGCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAALDDHR*QTNALE
Trigger: TTCCAGGGCATTGGTCTGGCATCTGTGGTCATCGAG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTAGAAAGTCCGTGCAATaGTCTGTGTTCCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVRKSVQ*SVFQKL
Trigger: CAACTTTTGGAACACAGAGCATTGCACGGACTTTCT...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAAATGGGGTCACTGTaGCGGCTCCTGAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFQMGSL*RLLSGS
Trigger: TGAACCACTCAGGAGCCGGCACAGTGACCCCATTTG...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGACCGCTCTTCCGGAGCTaGCTGGGGAACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRPLFRS*LGNMSM
Trigger: CATAGACATGTTCCCCAGGCAGCTCCGGAAGAGCGG...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGTTCCGGCCAGCACTaGCATCCAAGCAGGGATGTT +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKSSGQH*HPSRDV
Trigger: AACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACT...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGTCCAGACTGACGGCATaGAAAGGCTTGCCTCTGTCG +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKSRLTA*KGLPLS
Trigger: CGACAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGA...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGGCAGGAGCTGGAGATaGCATGAGAGACTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPGRSWR*HERLGG
Trigger: TCCTCCGAGTCTCTCATGGCATCTCCAGCTCCTGCC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATATCTTGTTGGTCCATTaGCCCCGATCCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDILLVH*PRSFTW
Trigger: CCAGGTGAAGGATCGGGGCCAATGGACCAACAAGAT...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGCCAGACCAATGCCCTaGAAGAGGGGGCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPARPMP*KRGQIF
Trigger: GAAGATCTGCCCCCTCTTCCAGGGCATTGGTCTGGC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGGTAAAATTCTCAAATaGGGTCACTGTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCGKILK*GHCAGS
Trigger: GGAGCCGGCACAGTGACCCCATTTGAGAATTTTACC...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGGAGGCGGAACAAATCTaGCTTCAAGTAGTAGATGAT +
Preference number: 4 (lower is better)
Translates to: ISALGRGTDSAGRHAECLEAEQI*LQVVDD
Trigger: ATCATCTACTACTTGAAGCCAGATTTGTTCCGCCTC...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGTCCACACAGACAAACTaGCTGTCCAGCCCTAGGAAT +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELSTQTN*LSSPRN
Trigger: ATTCCTAGGGCTGGACAGCCAGTTTGTCTGTGTGGA...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTTCTTCCGGAGCTGCCTaGGGAACATGTCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIASSGAA*GTCLWR
Trigger: CCTCCATAGACATGTTCCCCAGGCAGCTCCGGAAGA...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGATGACGACGAAGAGTaGGACACAGACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDDDDEE*DTDHGG
Trigger: TCCTCCATGGTCTGTGTCCCACTCTTCGTCGTCATC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGGATGACGACGAAGAGTaGGACACAGACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQDDDEE*DTDHGG
Trigger: TCCTCCATGGTCTGTGTCCCACTCTTCGTCGTCATC...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCATGGCACGTCCCAGTaGTGGTGTTATCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAAHGTSQ*WCYQQR
Trigger: CCTTTGCTGATAACACCACCACTGGGACGTGCCATG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGCAAATGGTGCTGCCTaGAGCACATTCGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLANGAA*STFGRI
Trigger: AATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTGAATTCCATGACAGGTaGGGTAAAATTCTCAAATGG +
Preference number: 4 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVEFHDR*GKILKW
Trigger: CCATTTGAGAATTTTACCTCACCTGTCATGGAATTC...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAACACCTGAGGGTCCTTaGGGCGGAACAAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRTPEGP*GGTNLA
Trigger: AGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGTGT...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATAACATCCCGCCCTCGGTaGCCAGGAAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILITSRPR*PGKALS
Trigger: TGATAGGGCTTTTCCTGGTCACCGAGGGCGGGATGT...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGACCACTTCAAACAATaGCAGGAACAGCAGGCATAT +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCDHFKQ*QEQQAY
Trigger: ATATGCCTGCTGTTCCTGTCATTGTTTGAAGTGGTC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGAGCTGGAGATGCCATaGGAGACTCGGAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPELEMP*ETRRKL
Trigger: GAGTTTCCTCCGAGTCTCTCATGGCATCTCCAGCTC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCATTCGGAAGGATTGTaGGGTGGGAAAGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLHSEGL*GGKESV
Trigger: CACAGATTCTTTCCCACCTCACAATCCTTCCGAATG...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTCAGGTGTGGCCGAAGTaGCTGCATGGTTCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIQVWPK*LHGSLL
Trigger: TAGGAGAGAACCATGCAGTCACTTCGGCCACACCTG...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGTTCCAAAAGTTGTTaGAGGTCGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSMKSGVCVRSRMANGAACSKSC*RSSRAA
Trigger: AGCTGCCCTGGACGACCTGCAACAACTTTTGGAACA...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTGGTTCAGAAAGTCCGTaGAATGCTCTGTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRGSESP*NALCSK
Trigger: TTTGGAACACAGAGCATTGCACGGACTTTCTGAACC...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGCAAATGGGGTCACTGTaGCGGCTCCTGAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQQMGSL*RLLSGS
Trigger: TGAACCACTCAGGAGCCGGCACAGTGACCCCATTTG...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGGGAACAGCAGGCATATaGCACTGGAAGCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLGTAGI*HWKHSS
Trigger: ACTACTATGCTTCCAGTGGCATATGCCTGCTGTTCC...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGGTAAAATTCTCAAATaGGGTCACTGTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDGKILK*GHCAGS
Trigger: GGAGCCGGCACAGTGACCCCATTTGAGAATTTTACC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGTCCACACAGACAAACTaGCTGTCCAGCCCTAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQSTQTN*LSSPRN
Trigger: ATTCCTAGGGCTGGACAGCCAGTTTGTCTGTGTGGA...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGTCTTCCGGAGCTGCCTaGGGAACATGTCTATGGAGG +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQSSGAA*GTCLWR
Trigger: CCTCCATAGACATGTTCCCCAGGCAGCTCCGGAAGA...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAAGCAGGGATGTTGCTTaGGCTGTGGCAGACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRSRDVA*AVADWS
Trigger: ACTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCT...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGTCCCTTTGTCTCTTTaGTCTCCAGGTTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDVPLSL*SPGSSS
Trigger: GGATGAGGAACCTGGAGACCAAAGAGACAAAGGGAC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 72 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATaGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPTGYCPIRLST*DGSVRSNYSSS
Trigger: AGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 72 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTATTGTCCCATCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PNGTSDPTQCVQ*SLPTGYCPIRL
Trigger: GAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGACCACTTCAAACAATaGCAGGAACAGCAGGCATAT +
Preference number: 4 (lower is better)
Translates to: VTSNRVLSHQALHIGRQCDHFKQ*QEQQAY
Trigger: ATATGCCTGCTGTTCCTGTCATTGTTTGAAGTGGTC...ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGTGTTCCAAAAGTTGTTaGAGGTCGTCCAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: QWNPHNSRCCNQMAASKKCSKSC*RSSRAA
Trigger: AGCTGCCCTGGACGACCTGCAACAACTTTTGGAACA...CTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGGAAGCAGAGGGCGATaGAGTCCTTGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQGSRGR*SPCSSC
Trigger: ACAACTGCTACAAGGACTGCATCGCCCTCTGCTTCC...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TCCCCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCCATACACCCAGCTTATaGAGACCACTTCAAACAATG +
Preference number: 4 (lower is better)
Translates to: SPQWNPHNSRCCNQMAASHTPSL*RPLQTM
Trigger: CATTGTTTGAAGTGGTCTGCATAAGCTGGGTGTATG...GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGCATAACTCGAGGTGTTaGAATCAGATGGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQHNSRC*NQMAAS
Trigger: GGAGGCCGCCATCTGATTGCAACACCTCGAGTTATG...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQTLQEQ*GTRAGA
Trigger: AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGT...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAACACTGCAAGAACAGTaGGGAACTAGGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPTLQEQ*GTRAGA
Trigger: AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGT...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGAGTTGATGAAACACTaGAAGAACAGTGCGGAACTA +
Preference number: 4 (lower is better)
Translates to: HFQQGIVPSGSPHWTAVCELMKH*KNSAEL
Trigger: TAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTC...GCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGAAGGGATCAAAGCCTaGCGAGGTAGCAAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIEGIKA*RGSKGQ
Trigger: TTGACCCTTGCTACCTCGGCAGGCTTTGATCCCTTC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCTAAGTTTCCCTGTGTaGATGGCACCAAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFLSFPV*MAPKPG
Trigger: GCCAGGTTTTGGTGCCATGCACACAGGGAAACTTAG...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCATGGGGAACATGTCTATaGAGGCTGTCACCAGGCACT +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPWGTCL*RLSPGT
Trigger: AGTGCCTGGTGACAGCCTCCATAGACATGTTCCCCA...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGAGGCATCCCCACAGTaGAATCCTCATAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPEASPQ*NPHNSR
Trigger: CCTCGAGTTATGAGGATTCCACTGTGGGGATGCCTC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCGGAAGGATTGTGAGGTaGGAAAGAATCTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: PRVQMQYALTRGIPTVESGRIVR*ERICDQ
Trigger: CTGATCACAGATTCTTTCCCACCTCACAATCCTTCC...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAAGGATTGTGAGGTaGGAAAGAATCTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGAGRIVR*ERICDQ
Trigger: CTGATCACAGATTCTTTCCCACCTCACAATCCTTCC...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
3UTR CAA 72 bp AACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCACATTGGACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: NTVCSVVTSNRV*SHQALHIGRQC
Trigger: ACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGATCACACCCCCTCTCTaGACTCTAAGTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSNTVCSVVTSNRVLSHQITPPL*TLSFPV
Trigger: CACAGGGAAACTTAGAGTTCAGAGAGGGGGTGTGAT...CTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000424061.6
CDS-3UTR TCA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTCAAATATGACTCGATaGCCACAGATGCCAGACCAA +
Preference number: 4 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGSNMTR*PQMPDQ
Trigger: TTGGTCTGGCATCTGTGGTCATCGAGTCATATTTGA...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCATGCCGAGTGTTTGTaGAGTCTAGGAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFHAECL*SLGIIS
Trigger: GGAGATGATTCCTAGACTTCACAAACACTCGGCATG...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTAGAAAGTCCGTGCAATaGTCTGTGTTCCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: APGVDETLQEQCGTRAGARKSVQ*SVFQKL
Trigger: CAACTTTTGGAACACAGAGCATTGCACGGACTTTCT...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCCATACACCCAGCTTATaGAGACCACTTCAAACAATG +
Preference number: 4 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLHTPSL*RPLQTM
Trigger: CATTGTTTGAAGTGGTCTGCATAAGCTGGGTGTATG...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCATTGGACGGCAGTGTaGGTTCCAATTATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFHWTAV*VPIIAP
Trigger: AGGAGCTATAATTGGAACGCACACTGCCGTCCAATG...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATACAGTGCAGGGAGGCATaGCGAGTGTTTGTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILIQCREA*RVFVKS
Trigger: AGACTTCACAAACACTCGGCATGCCTCCCTGCACTG...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGGTAAAATTCTCAAATaGGGTCACTGTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPGKILK*GHCAGS
Trigger: GGAGCCGGCACAGTGACCCCATTTGAGAATTTTACC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGGAGGCGGAACAAATCTaGCTTCAAGTAGTAGATGAT +
Preference number: 4 (lower is better)
Translates to: RCHERLGGNSRLTACKGLEAEQI*LQVVDD
Trigger: ATCATCTACTACTTGAAGCCAGATTTGTTCCGCCTC...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATAGATGACGACGAAGAGTaGGACACAGACCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILIDDDEE*DTDHGG
Trigger: TCCTCCATGGTCTGTGTCCCACTCTTCGTCGTCATC...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGTCCCTTTGTCTCTTTaGTCTCCAGGTTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPVPLSL*SPGSSS
Trigger: GGATGAGGAACCTGGAGACCAAAGAGACAAAGGGAC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAATTCCATGACAGGTaGGGTAAAATTCTCAAATGG +
Preference number: 4 (lower is better)
Translates to: LQELMKHCKNSAELGQELEFHDR*GKILKW
Trigger: CCATTTGAGAATTTTACCTCACCTGTCATGGAATTC...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGGAACAGCAGGCATATaGCACTGGAAGCATAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRGTAGI*HWKHSS
Trigger: ACTACTATGCTTCCAGTGGCATATGCCTGCTGTTCC...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGCATACACCCAGCTTATaGAGACCACTTCAAACAATG +
Preference number: 4 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGHTPSL*RPLQTM
Trigger: CATTGTTTGAAGTGGTCTGCATAAGCTGGGTGTATG...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATGAGTTGATGAAACACTaGAAGAACAGTGCGGAACTA +
Preference number: 4 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDELMKH*KNSAEL
Trigger: TAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTC...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATAGCAAATGGTGCTGCCTaGAGCACATTCGGAAGGATT +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILIANGAA*STFGRI
Trigger: AATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGC...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCTTAATGGGAAGACACTaGCCTGAGCACAAGGAGATA +
Preference number: 4 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFLMGRH*PEHKEI
Trigger: TATCTCCTTGTGCTCAGGCCAGTGTCTTCCCATTAA...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000397296.6
CDS-3UTR TCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGACCACTTCAAACAATaGCAGGAACAGCAGGCATAT +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIDHFKQ*QEQQAY
Trigger: ATATGCCTGCTGTTCCTGTCATTGTTTGAAGTGGTC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGTGGGAAAGAATCTGTaGTCAGTTAGCAATATCGGC +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRVGKNL*SVSNIG
Trigger: GCCGATATTGCTAACTGATCACAGATTCTTTCCCAC...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATACATTGGACGGCAGTGTaGGTTCCAATTATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CTNAVRSNKRHPHSGILIHWTAV*VPIIAP
Trigger: AGGAGCTATAATTGGAACGCACACTGCCGTCCAATG...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGGAAGGATTGTGAGGTaGGAAAGAATCTGTGATCAG +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRGRIVR*ERICDQ
Trigger: CTGATCACAGATTCTTTCCCACCTCACAATCCTTCC...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTAGAAAGTCCGTGCAATaGTCTGTGTTCCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIRKSVQ*SVFQKL
Trigger: CAACTTTTGGAACACAGAGCATTGCACGGACTTTCT...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR GCA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAGAGTTGATGAAACACTaGAAGAACAGTGCGGAACTA +
Preference number: 4 (lower is better)
Translates to: SGILITRGVAIRWRPPKRELMKH*KNSAEL
Trigger: TAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTC...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CCA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGAGGCGGAACAAATCTaGCTTCAAGTAGTAGATGAT +
Preference number: 4 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIEAEQI*LQVVDD
Trigger: ATCATCTACTACTTGAAGCCAGATTTGTTCCGCCTC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR TCA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGAATTCCATGACAGGTaGGGTAAAATTCTCAAATGG +
Preference number: 4 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPEFHDR*GKILKW
Trigger: CCATTTGAGAATTTTACCTCACCTGTCATGGAATTC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS CCA 90 bp GGAGGCCCACACTCTTGCACTGCCACCTTCCCGTCCATGGCTGTGTaGTGGGTTGGGAAGCCCCGCTGGGTGGGCAGGATGACGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GGPHSCTATFPSMAV*WVGKPRWVGRMTRA
Trigger: GGCCCTCGTCATCCTGCCCACCCAGCGGGGCTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS CCA 90 bp GGCCCACACTCTTGCACTGCCACCTTCCCGTCCATGGCTGTGTGGTaGGTTGGGAAGCCCCGCTGGGTGGGCAGGATGACGAGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GPHSCTATFPSMAVW*VGKPRWVGRMTRAK
Trigger: TTTGGCCCTCGTCATCCTGCCCACCCAGCGGGGCTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS GCA 90 bp TCTCCCTCCTCGGGGACCCAGGAGACTGCAGGAGGCCCACACTCTTaGACTGCCACCTTCCCGTCCATGGCTGTGTGGTGGGTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SPSSGTQETAGGPHS*TATFPSMAVWWVGK
Trigger: CTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCCGAGGAGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS GCA 90 bp GCGATGGTGAGGATGAGGAGCTCGCGCCGCCCGCTCTTCCGGAGCTaGCTGGGGAACATGTCTATGGAGGCTGTCACCAGGCACTCCACA +
Preference number: 5 (lower is better)
Translates to: AMVRMRSSRRPLFRS*LGNMSMEAVTRHST
Trigger: TGTGGAGTGCCTGGTGACAGCCTCCATAGACATGTTCCCCAGGCAGCTCCGGAAGAGCGGGCGGCGCGAGCTCCTCATCCTCACCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000542825.5
ENST00000684302.1
CDS TCA 90 bp TCGTCACGCTCAGCCGGCAGGCAGCGGGCAGGAACCCCTCACCTGTaGTCATTTATTGCAGTTCCTGGGCCCTCGGGAATGCCCCGAGGT +
Preference number: 5 (lower is better)
Translates to: SSRSAGRQRAGTPHL*SFIAVPGPSGMPRG
Trigger: ACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGCCTGCCGGCTGAGCGTGACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS CCA 90 bp ACACTCTTGCACTGCCACCTTCCCGTCCATGGCTGTGTGGTGGGTTaGGAAGCCCCGCTGGGTGGGCAGGATGACGAGGGCCAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: TLLHCHLPVHGCVVG*EAPLGGQDDEGQSL
Trigger: AAGGCTTTGGCCCTCGTCATCCTGCCCACCCAGCGGGGCTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS GCA 90 bp AGCCGGCAGGCAGCGGGCAGGAACCCCTCACCTGTGATCATTTATTaGAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTTTCTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SRQAAGRNPSPVIIY*SSWALGNAPRFLLS
Trigger: GGACAGGAGAAACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGCCTGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS CCA 90 bp GTTCCCGGCTTAGGAGCCGCCTGGCCTCTGGCCACACCCTACAAATaGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTTGTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPGLGAAWPLATPYK*VSFSPAISPSLVGE
Trigger: CTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCCATTTGTAGGGTGTGGCCAGAGGCCAGGCGGCTCCTAAGCCGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000545058.5
ENST00000684302.1
CDS GCA 90 bp TCAGTCCTTCCCTTGTTGGGGAGGGCCCAAAGTTCCGGCCAGCACTaGCATCCAAGCAGGGATGTTGCTTGGGCTGTGGCAGACTGGAGT +
Preference number: 5 (lower is better)
Translates to: SVLPLLGRAQSSGQH*HPSRDVAWAVADWS
Trigger: ACTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS-3UTR CAA 90 bp CCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCATCAGGCTCTCCACATaGGACGGCAGTGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: PSHREWRPNMARPSGGVIIRLST*DGSVRS
Trigger: GGAACGCACACTGCCGTCCAATGTGGAGAGCCTGAT...GATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GGCTGTCCGCTGAGAATGGAGGGTGGCCCTGACCTAGGTTCCCGGCTTAGGAGCTTAGCAATATCGGCCTaGGGCAGAGGAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: GCPLRMEGGPDLGSRLRSLAISA*GRGTDS
Trigger: ACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAA...GCTCCTAAGCCGGGAACCTAGGTCAGGGCCACCCTCCATTCTCAGCGGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS TCA 90 bp AGTCCCAAGGCAGCTGCTTATGGGAAAGCCAAGAGAGCCGGGACCTaGAAGGGAAACTGCCCTCCACGTTCACGCCTTACCCTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPKAAAYGKAKRAGT*KGNCPPRSRLTLFL
Trigger: GAGGAACAGGGTAAGGCGTGAACGTGGAGGGCAGTTTCCCTTTCAGGTCCCGGCTCTCTTGGCTTTCCCATAAGCAGCTGCCTTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535347.5
ENST00000536824.5
ENST00000684302.1
CDS CCA 90 bp CGAGGTAGCAAGGGTCAACGGGCAGGTGTGGCCGAAGTGACTGCATaGTTCTCTCCTAGCCAGCTGTGTGCTAAGGTGATCGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: RGSKGQRAGVAEVTA*FSPSQLCAKVIDQL
Trigger: GAGCTGATCGATCACCTTAGCACACAGCTGGCTAGGAGAGAACCATGCAGTCACTTCGGCCACACCTGCCCGTTGACCCTTGCTACCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS CCA 90 bp CAGAGGGCGATGCAGTCCCTGAGGGTCCTTGAGGCGGAACAAATCTaGCTTCAAGTAGTAGATGATGCCCTGGTAGGCTCCGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: QRAMQSLRVLEAEQI*LQVVDDALVGSGKG
Trigger: ACCCTTCCCGGAGCCTACCAGGGCATCATCTACTACTTGAAGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGGACTGCATCGCCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542825.5
CDS-3UTR CAA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGCCCTGTGATCATTTATaGCAGTTCCTGGGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: ISALGRGTDSAGRHAECLPCDHL*QFLGPR
Trigger: CCGAGGGCCCAGGAACTGCAATAAATGATCACAGGG...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS-3UTR CAA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCAGGAGGCCCACACTCTaGCACTGCCACCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLRRPTL*HCHLPV
Trigger: GACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCT...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGAGGAGGCCCACACTCTaGCACTGCCACCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: LQELMKHCKNSAELGQELRRPTL*HCHLPV
Trigger: GACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCT...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTAGGAGGCCCACACTCTaGCACTGCCACCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: APGVDETLQEQCGTRAGARRPTL*HCHLPV
Trigger: GACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCT...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGCCCTTGGCTGGTGTATaGGCCCAACGCCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLPLAGV*AQRHLQ
Trigger: CTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGGG...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp ATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTGATCCAAGCAGGGATGTaGCTTGGGCTGTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: ISALGRGTDSAGRHAECLIQAGM*LGLWQT
Trigger: AGTCTGCCACAGCCCAAGCAACATCCCTGCTTGGAT...CAAACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp AACGATGGTGCCTTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGGAGGAAATCCAGGCCTaGGCAGATGAAGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: NDGAFPQGVASQHGTSQWEEIQA*ADEVIH
Trigger: GTGAATCACTTCATCTGCCAAGGCCTGGATTTCCTC...CCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAAGGCACCATCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAACCCTTGGCTGGTGTATaGGCCCAACGCCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKPLAGV*AQRHLQ
Trigger: CTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGGG...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TCATCCATGAAGTCAGGGGTTTGCGTTAGAAGCAGGATGGCAAATGGTGCTGCCCCCTTGGCTGGTGTATaGGCCCAACGCCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSMKSGVCVRSRMANGAAPLAGV*AQRHLQ
Trigger: CTGGAGGTGGCGTTGGGCCAATACACCAGCCAAGGG...GGCAGCACCATTTGCCATCCTGCTTCTAACGCAAACCCCTGACTTCATGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTCTGTGTTCCAAAAGTaGTTGCAGGTCGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVSVFQK*LQVVQG
Trigger: GCCCTGGACGACCTGCAACAACTTTTGGAACACAGA...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CAATATCGGCCTTGGGCAGAGGAACGGACAGTGCAGGGAGGCATGCCGAGTGTTTTAGCAATATCGGCCTaGGGCAGAGGAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: QYRPWAEERTVQGGMPSVLAISA*GRGTDS
Trigger: ACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAA...AACACTCGGCATGCCTCCCTGCACTGTCCGTTCCTCTGCCCAAGGCCGATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS TCA 90 bp CTTGATGTGAGCACTCCCGCCTTGGGCAATTTCAAGCTACTGGCATaGCACCACCGAGCATGGCAGTGGGAAGAGACATGCACACTCAGC +
Preference number: 5 (lower is better)
Translates to: LDVSTPALGNFKLLA*HHRAWQWEETCTLS
Trigger: GCTGAGTGTGCATGTCTCTTCCCACTGCCATGCTCGGTGGTGTCATGCCAGTAGCTTGAAATTGCCCAAGGCGGGAGTGCTCACATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS TCA 90 bp CCACGTTCACGCCTTACCCTGTTCCTCCCAGCGCAGAATCCCATGTaGCTTGTCCAGGGACTCCCAGACAGAAAGAAGCCGTGTGTGTAT +
Preference number: 5 (lower is better)
Translates to: PRSRLTLFLPAQNPM*LVQGLPDRKKPCVY
Trigger: ATACACACACGGCTTCTTTCTGTCTGGGAGTCCCTGGACAAGTCACATGGGATTCTGCGCTGGGAGGAACAGGGTAAGGCGTGAACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684302.1
CDS-3UTR CAA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCGGCTGTGACACTCCCTaGGCTGGTGTATTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: PRVQMQYALTRGIPTVESGCDTP*AGVLAQ
Trigger: TTGGGCCAATACACCAGCCAAGGGAGTGTCACAGCC...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGAAGCAGGGATGTTGCTaGGGCTGTGGCAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: QELMKHCKNSAELGQELEKQGCC*GCGRLE
Trigger: CTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCTT...CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCAAGCAGGGATGTTGCTaGGGCTGTGGCAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: PRVQMQYALTRGIPTVESKQGCC*GCGRLE
Trigger: CTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCTT...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTAAGCAGGGATGTTGCTaGGGCTGTGGCAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: APGVDETLQEQCGTRAGAKQGCC*GCGRLE
Trigger: CTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCTT...AGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTATCCAAGCAGGGATGTaGCTTGGGCTGTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRIQAGM*LGLWQT
Trigger: AGTCTGCCACAGCCCAAGCAACATCCCTGCTTGGAT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGTCAGTCCTTCCCTTGTaGGGGAGGGCCCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LQELMKHCKNSAELGQELSVLPL*GRAQSS
Trigger: GGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGA...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGTCAGTCCTTCCCTTGTaGGGGAGGGCCCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLSVLPL*GRAQSS
Trigger: GGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGA...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGCTATCAGTCCTTCCCTaGTTGGGGAGGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: HERLGGNSRLTACKGLPLLSVLP*LGRAQS
Trigger: ACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAG...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCCCGTGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCCATCTTGTTGGTCCATaGGCCCCGATCCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: PRVQMQYALTRGIPTVESHLVGP*APILHL
Trigger: CAGGTGAAGGATCGGGGCCAATGGACCAACAAGATG...GGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGGGCTGTGACACTCCCTaGGCTGGTGTATTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQGCDTP*AGVLAQ
Trigger: TTGGGCCAATACACCAGCCAAGGGAGTGTCACAGCC...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCCTCTGTCTGTGTTCCAAAAGTaGTTGCAGGTCGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: HERLGGNSRLTACKGLPLSVFQK*LQVVQG
Trigger: GCCCTGGACGACCTGCAACAACTTTTGGAACACAGA...CAGAGGCAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGATCCAAGCAGGGATGTaGCTTGGGCTGTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLIQAGM*LGLWQT
Trigger: AGTCTGCCACAGCCCAAGCAACATCCCTGCTTGGAT...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCTATCAGTCCTTCCCTaGTTGGGGAGGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LQELMKHCKNSAELGQELLSVLP*LGRAQS
Trigger: ACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCACAGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAATCAGGCTCTCCACATaGGACGGCAGTGTGCGTTCC +
Preference number: 5 (lower is better)
Translates to: PQWNPHNSRCCNQMAASKIRLST*DGSVRS
Trigger: GGAACGCACACTGCCGTCCAATGTGGAGAGCCTGAT...TTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGTCTGTGTTCCAAAAGTaGTTGCAGGTCGTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QELMKHCKNSAELGQELESVFQK*LQVVQG
Trigger: GCCCTGGACGACCTGCAACAACTTTTGGAACACAGA...CTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TTCCCACAGGGAGTGGCGTCCCAACATGGCACGTCCCAGTGGTGGTGTTATCAGACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: FPQGVASQHGTSQWWCYQTQCVQ*SLPTGY
Trigger: ATACCCTGTTGGAAGTGACAACTGAACACACTGTGT...CTGATAACACCACCACTGGGACGTGCCATGTTGGGACGCCACTCCCTGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTCCTCTCACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTA +
Preference number: 5 (lower is better)
Translates to: PSGSPHWTAVCVPIIAPLTACKG*PLSLSL
Trigger: TAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGT...GAGAGGAGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGGCTGTGACACTCCCTaGGCTGGTGTATTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPGCDTP*AGVLAQ
Trigger: TTGGGCCAATACACCAGCCAAGGGAGTGTCACAGCC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTA +
Preference number: 5 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQTACKG*PLSLSL
Trigger: TAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGT...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGTTAGCAATATCGGCCTaGGGCAGAGGAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGLAISA*GRGTDS
Trigger: ACTGTCCGTTCCTCTGCCCAAGGCCGATATTGCTAA...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TGTACAAATGCAGTACGCTCTAACAAGAGGCATCCCCACAGTGGAATCCTCATATCAGTCCTTCCCTTGTaGGGGAGGGCCCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: CTNAVRSNKRHPHSGILISVLPL*GRAQSS
Trigger: GGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGA...TATGAGGATTCCACTGTGGGGATGCCTCTTGTTAGAGCGTACTGCATTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGACTATCAGTCCTTCCCTaGTTGGGGAGGGCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: SGILITRGVAIRWRPPKRLSVLP*LGRAQS
Trigger: ACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAG...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIATSNRV*SHQALH
Trigger: GTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGT...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: LPTGYCPIRLSTLDGSVRTQCVQ*SLPTGY
Trigger: ATACCCTGTTGGAAGTGACAACTGAACACACTGTGT...ACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp AAGGATCCCCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCACGGCATGCAAAGGCTaGCCTCTGTCGTTAAGCCTA +
Preference number: 5 (lower is better)
Translates to: KDPLTEPPIQHSVFSCHFTACKG*PLSLSL
Trigger: TAGGCTTAACGACAGAGGCAAGCCTTTGCATGCCGT...GAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GCGTTAGAAGCAGGATGGCAAATGGTGCTGCCTGGAGCACATTCGGAAGGATTGCCAATGCTCCAGGAGTaGATGAAACACTGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: ALEAGWQMVLPGAHSEGLPMLQE*MKHCKN
Trigger: GTTCTTGCAGTGTTTCATCAACTCCTGGAGCATTGG...CAATCCTTCCGAATGTGCTCCAGGCAGCACCATTTGCCATCCTGCTTCTAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SGILITRGVAIRWRPPKRTSNRV*SHQALH
Trigger: GTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGT...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTACTTCCAACAGGGTATaGTCCCATCAGGCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VCSVVTSNRVLSHQALHITSNRV*SHQALH
Trigger: GTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGT...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CCTAACGGAACCTCCGATCCAACACAGTGTGTTCAGTTGTCACTTCCAACAGGGCCAATGCTCCAGGAGTaGATGAAACACTGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: PNGTSDPTQCVQLSLPTGPMLQE*MKHCKN
Trigger: GTTCTTGCAGTGTTTCATCAACTCCTGGAGCATTGG...CCCTGTTGGAAGTGACAACTGAACACACTGTGTTGGATCGGAGGTTCCGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATCCAATGCTCCAGGAGTaGATGAAACACTGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDPMLQE*MKHCKN
Trigger: GTTCTTGCAGTGTTTCATCAACTCCTGGAGCATTGG...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGGAGATCTTGAAAAAGTCCCTTaGTCTCTTTGGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GVDETLQEQCGTRAGAGDLEKVP*SLWSPG
Trigger: ACCTGGAGACCAAAGAGACAAAGGGACTTTTTCAAG...ATCTCCAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp TCTGTCGTTAAGCCTAAGGAAGGATCCCCTAACGGAACCTCCGATCCAACACAGCTTGAAAAAGTCCCTTaGTCTCTTTGGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SVVKPKEGSPNGTSDPTQLEKVP*SLWSPG
Trigger: ACCTGGAGACCAAAGAGACAAAGGGACTTTTTCAAG...CTGTGTTGGATCGGAGGTTCCGTTAGGGGATCCTTCCTTAGGCTTAACGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp ATTGTCCCATCAGGCTCTCCACATTGGACGGCAGTGTGCGTTCCAATTATAGCTGCAATCCATACACACTaGTTAACTAAGGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: IVPSGSPHWTAVCVPIIAAIHTH*LTKAGG
Trigger: ACCCCCTGCCTTAGTTAACAAGTGTGTATGGATTGC...AGCTATAATTGGAACGCACACTGCCGTCCAATGTGGAGAGCCTGATGGGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000397296.6
CDS-3UTR CAA 90 bp GTGTGTTCAGTTGTCACTTCCAACAGGGTATTGTCCCATCAGGCTCTCCACATTGAGGAAATCCAGGCCTaGGCAGATGAAGTGATTCAC +
Preference number: 5 (lower is better)
Translates to: VCSVVTSNRVLSHQALHIEEIQA*ADEVIH
Trigger: GTGAATCACTTCATCTGCCAAGGCCTGGATTTCCTC...AATGTGGAGAGCCTGATGGGACAATACCCTGTTGGAAGTGACAACTGAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp CTCCAGGAGTTGATGAAACACTGCAAGAACAGTGCGGAACTAGGGCAGGAGCTGCTTAGTTTTCTGAGTTaGCAGATGAGGAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: LQELMKHCKNSAELGQELLSFLS*QMRKSR
Trigger: CCTGGATTTCCTCATCTGCAAACTCAGAAAACTAAG...CAGCTCCTGCCCTAGTTCCGCACTGTTCTTGCAGTGTTTCATCAACTCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp AGATGCCATGAGAGACTCGGAGGAAACTCCAGACTGACGGCATGCAAAGGCTTGCTTAGTTTTCTGAGTTaGCAGATGAGGAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: RCHERLGGNSRLTACKGLLSFLS*QMRKSR
Trigger: CCTGGATTTCCTCATCTGCAAACTCAGAAAACTAAG...CAAGCCTTTGCATGCCGTCAGTCTGGAGTTTCCTCCGAGTCTCTCATGGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS-3UTR CAA 90 bp GTGTTTGTGAAGTCTAGGAATCATCTCCCAAGCCCCTTCCATTCCAATGCTCCAGCAATCCATACACACTaGTTAACTAAGGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: VFVKSRNHLPSPFHSNAPAIHTH*LTKAGG
Trigger: ACCCCCTGCCTTAGTTAACAAGTGTGTATGGATTGC...TGGAGCATTGGAATGGAAGGGGCTTGGGAGATGATTCCTAGACTTCACAAACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000397296.6
CDS-3UTR CAA 90 bp AGTGGAATCCTCATAACTCGAGGTGTTGCAATCAGATGGCGGCCTCCAAAAAGAACACAGTGTGTTCAGTaGTCACTTCCAACAGGGTAT +
Preference number: 5 (lower is better)
Translates to: SGILITRGVAIRWRPPKRTQCVQ*SLPTGY
Trigger: ATACCCTGTTGGAAGTGACAACTGAACACACTGTGT...TCTTTTTGGAGGCCGCCATCTGATTGCAACACCTCGAGTTATGAGGATTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
CDS CCA 72 bp ACAAAACCTCTCCTTTGGGGCCCGGCGAGCCCACCCTaGCAAGGACGGGTTCCACCGCGGTCTCCACCGCGC +
Preference number: 6 (lower is better)
Translates to: TKPLLWGPASPP*QGRVPPRSPPR
Trigger: GCGCGGTGGAGACCGCGGTGGAACCCGTCCTTGCCAGGGTGGGCTCGCCGGGCCCCAAAGGAGAGGTTTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538272.5
CDS CCA 72 bp CACTGCCACCTTCCCGTCCATGGCTGTGTGGTGGGTTaGGAAGCCCCGCTGGGTGGGCAGGATGACGAGGGC +
Preference number: 6 (lower is better)
Translates to: HCHLPVHGCVVG*EAPLGGQDDEG
Trigger: GCCCTCGTCATCCTGCCCACCCAGCGGGGCTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp GAGGCCCACACTCTTGCACTGCCACCTTCCCGTCCATaGCTGTGTGGTGGGTTGGGAAGCCCCGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: EAHTLALPPSRP*LCGGLGSPAGW
Trigger: CCACCCAGCGGGGCTTCCCAACCCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS GCA 72 bp TCGGGGACCCAGGAGACTGCAGGAGGCCCACACTCTTaGACTGCCACCTTCCCGTCCATGGCTGTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: SGTQETAGGPHS*TATFPSMAVWW
Trigger: CCACCACACAGCCATGGACGGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS GCA 72 bp AGGATGAGGAGCTCGCGCCGCCCGCTCTTCCGGAGCTaGCTGGGGAACATGTCTATGGAGGCTGTCACCAGG +
Preference number: 6 (lower is better)
Translates to: RMRSSRRPLFRS*LGNMSMEAVTR
Trigger: CCTGGTGACAGCCTCCATAGACATGTTCCCCAGGCAGCTCCGGAAGAGCGGGCGGCGCGAGCTCCTCATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000542825.5
ENST00000684302.1
CDS GCA 72 bp GTCCAACTTCTCTCCCTCCTCGGGGACCCAGGAGACTaGAGGAGGCCCACACTCTTGCACTGCCACCTTCCC +
Preference number: 6 (lower is better)
Translates to: VQLLSLLGDPGD*RRPTLLHCHLP
Trigger: GGGAAGGTGGCAGTGCAAGAGTGTGGGCCTCCTGCAGTCTCCTGGGTCCCCGAGGAGGGAGAGAAGTTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535347.5
ENST00000536116.5
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS CAA 90 bp GGAGGGCCCAAAGTTCCGGCCAGCACTGCCATCCAAGCAGGGATGTaGCTTGGGCTGTGGCAGACTGGAGTCAGGGGTGATGAGCTGACG +
Preference number: 6 (lower is better)
Translates to: GGPKVPASTAIQAGM*LGLWQTGVRGDELT
Trigger: CGTCAGCTCATCACCCCTGACTCCAGTCTGCCACAGCCCAAGCAACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACTTTGGGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS CAA 90 bp CAGCCGGCAGGCAGCGGGCAGGAACCCCTCACCTGTGATCATTTATaGCAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTTTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: QPAGSGQEPLTCDHL*QFLGPRECPEVSPV
Trigger: GACAGGAGAAACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGCCTGCCGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS GCA 72 bp TCCCCTCGTCAGATGACCACCCCTGCTTTCACCCACTaGCGTGACCAGCTGCCCATCGCTGGACTTTCCTGC +
Preference number: 6 (lower is better)
Translates to: SPRQMTTPAFTH*RDQLPIAGLSC
Trigger: GCAGGAAAGTCCAGCGATGGGCAGCTGGTCACGGCAGTGGGTGAAAGCAGGGGTGGTCATCTGACGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359674.8
ENST00000538424.1
CDS GCA 72 bp CCCTTGTTGGGGAGGGCCCAAAGTTCCGGCCAGCACTaGCATCCAAGCAGGGATGTTGCTTGGGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: PLLGRAQSSGQH*HPSRDVAWAVA
Trigger: TGCCACAGCCCAAGCAACATCCCTGCTTGGATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS CCA 72 bp CATTGGCCCCGATCCTTCACCTGGTCCTCGTCTTCCTaGTCCAACTTCTCTCCCTCCTCGGGGACCCAGGAG +
Preference number: 6 (lower is better)
Translates to: HWPRSFTWSSSS*SNFSPSSGTQE
Trigger: CTCCTGGGTCCCCGAGGAGGGAGAGAAGTTGGACCAGGAAGACGAGGACCAGGTGAAGGATCGGGGCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000537793.1
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp GGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTTGTTaGGGAGGGCCCAAAGTTCCGGCCAGCACTGCCATC +
Preference number: 6 (lower is better)
Translates to: GLLLPGYQSFPC*GGPKVPASTAI
Trigger: GATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS CAA 72 bp GGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTTGTaGGGGAGGGCCCAAAGTTCCGGCCAGCACTGCCAT +
Preference number: 6 (lower is better)
Translates to: GSPSPRLSVLPL*GRAQSSGQHCH
Trigger: ATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS TCA 72 bp TCAGCCGGCAGGCAGCGGGCAGGAACCCCTCACCTGTaGTCATTTATTGCAGTTCCTGGGCCCTCGGGAATG +
Preference number: 6 (lower is better)
Translates to: SAGRQRAGTPHL*SFIAVPGPSGM
Trigger: CATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGCCTGCCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS CCA 72 bp GTAGGGGATGAAGAAGGCTCCTGGTCCTCGTCTTCCTaGTCCAACTTCTCTCCCTCCTCGGGGACCCAGGAG +
Preference number: 6 (lower is better)
Translates to: VGDEEGSWSSSS*SNFSPSSGTQE
Trigger: CTCCTGGGTCCCCGAGGAGGGAGAGAAGTTGGACCAGGAAGACGAGGACCAGGAGCCTTCTTCATCCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535347.5
ENST00000536116.5
CDS CAA 72 bp AATGGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTaGTTGGGGAGGGCCCAAAGTTCCGGCCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: NGSPSPRLSVLP*LGRAQSSGQHC
Trigger: GCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS CAA 72 bp GGCAGCGGGCAGGAACCCCTCACCTGTGATCATTTATaGCAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTT +
Preference number: 6 (lower is better)
Translates to: GSGQEPLTCDHL*QFLGPRECPEV
Trigger: AACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS CAA 90 bp CCTACAAATGGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTTGTaGGGGAGGGCCCAAAGTTCCGGCCAGCACTGCCATCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: PTNGSPSPRLSVLPL*GRAQSSGQHCHPSR
Trigger: CCTGCTTGGATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCCATTTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000545058.5
ENST00000684302.1
CDS CAA 90 bp CACCCTACAAATGGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTaGTTGGGGAGGGCCCAAAGTTCCGGCCAGCACTGCCATCCAAGC +
Preference number: 6 (lower is better)
Translates to: HPTNGSPSPRLSVLP*LGRAQSSGQHCHPS
Trigger: GCTTGGATGGCAGTGCTGGCCGGAACTTTGGGCCCTCCCCAACAAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCCATTTGTAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000545058.5
ENST00000684302.1
CDS TCA 72 bp CCCAGCGCAGGGAGCCCAGGTCATGGATGCCCGAGGTaGTGCCCAGAACTCGTCTCCTGTGTTCCAAAAGTT +
Preference number: 6 (lower is better)
Translates to: PSAGSPGHGCPR*CPELVSCVPKV
Trigger: AACTTTTGGAACACAGGAGACGAGTTCTGGGCATCACCTCGGGCATCCATGACCTGGGCTCCCTGCGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538272.5
CDS GCA 72 bp GCAGCGGGCAGGAACCCCTCACCTGTGATCATTTATTaGAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTTT +
Preference number: 6 (lower is better)
Translates to: AAGRNPSPVIIY*SSWALGNAPRF
Trigger: AAACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGTGAGGGGTTCCTGCCCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538424.1
CDS CCA 72 bp TTAGGAGCCGCCTGGCCTCTGGCCACACCCTACAAATaGGTCTCCTTCTCCCCGGCTATCAGTCCTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LGAAWPLATPYK*VSFSPAISPSL
Trigger: AAGGGAAGGACTGATAGCCGGGGAGAAGGAGACCCATTTGTAGGGTGTGGCCAGAGGCCAGGCGGCTCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000545058.5
ENST00000684302.1
CDS TCA 72 bp GAGGTAGCAAGGGTCAACGGGCAGGTGTGGCCGAAGTaGCTGCATGGTTCTCTCCTAGCCAGCTGTGTGCTA +
Preference number: 6 (lower is better)
Translates to: EVARVNGQVWPK*LHGSLLASCVL
Trigger: TAGCACACAGCTGGCTAGGAGAGAACCATGCAGTCACTTCGGCCACACCTGCCCGTTGACCCTTGCTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS TCA 72 bp GGCACCTGGGGAAGTGGTCCCAGCACGGTACATACCTaGGGGTCCTTGAGGCGGAACAAATCTGGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: GTWGSGPSTVHT*GSLRRNKSGFK
Trigger: CTTGAAGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGTATGTACCGTGCTGGGACCACTTCCCCAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540094.1
CDS GCA 72 bp GTGGGCATCAGGTCTCCAGGAGAGTCCCAAGGCAGCTaGTTATGGGAAAGCCAAGAGAGCCGGGACCTGAAA +
Preference number: 6 (lower is better)
Translates to: VGIRSPGESQGS*LWESQESRDLK
Trigger: TTTCAGGTCCCGGCTCTCTTGGCTTTCCCATAAGCAGCTGCCTTGGGACTCTCCTGGAGACCTGATGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535347.5
ENST00000536824.5
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp GGAGCCAGCAGCTCTGGGCAGCAAGACAATGAGTCGTaGAGCTGGGTCTCTAACTTGCTGTGTGACCTCAGG +
Preference number: 6 (lower is better)
Translates to: GASSSGQQDNES*SWVSNLLCDLR
Trigger: CCTGAGGTCACACAGCAAGTTAGAGACCCAGCTCCACGACTCATTGTCTTGCTGCCCAGAGCTGCTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424061.6
CDS CAA 72 bp TGGGGGTTAGCTCAGTGTGAGAGAGTACAGGCAGTCTaGCGTGGGAATGCAGGTGGACGAGTGTGGGCACAC +
Preference number: 6 (lower is better)
Translates to: WGLAQCERVQAV*RGNAGGRVWAH
Trigger: GTGTGCCCACACTCGTCCACCTGCATTCCCACGCAAGACTGCCTGTACTCTCTCACACTGAGCTAACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS TCA 72 bp GGGAATGCAGGTGGACGAGTGTGGGCACACGTAATGTaGAGGGGTACGTTGTCAGGTGAGAGGGTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: GNAGGRVWAHVM*RGTLSGERVSV
Trigger: CACACTCACCCTCTCACCTGACAACGTACCCCTTCACATTACGTGTGCCCACACTCGTCCACCTGCATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CCA 72 bp AAGGGTCAACGGGCAGGTGTGGCCGAAGTGACTGCATaGTTCTCTCCTAGCCAGCTGTGTGCTAAGGTGATC +
Preference number: 6 (lower is better)
Translates to: KGQRAGVAEVTA*FSPSQLCAKVI
Trigger: GATCACCTTAGCACACAGCTGGCTAGGAGAGAACCATGCAGTCACTTCGGCCACACCTGCCCGTTGACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS TCA 72 bp GAGTGTGTGAGTGGAGGGTGTGCCCATGTCTTGATGTaGGCACTCCCGCCTTGGGCAATTTCAAGCTACTGG +
Preference number: 6 (lower is better)
Translates to: ECVSGGCAHVLM*ALPPWAISSYW
Trigger: CCAGTAGCTTGAAATTGCCCAAGGCGGGAGTGCTCACATCAAGACATGGGCACACCCTCCACTCACACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS GCA 72 bp GGTATTGAGGGAATCAAAGCGACCAGGTCTACCAAGTaGCCCACGCTCCTCCAAGGCTCTAGAGAAACAGGG +
Preference number: 6 (lower is better)
Translates to: GIEGIKATRSTK*PTLLQGSRETG
Trigger: CCCTGTTTCTCTAGAGCCTTGGAGGAGCGTGGGGCACTTGGTAGACCTGGTCGCTTTGATTCCCTCAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537793.1
CDS CCA 72 bp CAGGATGACGAGGGCCAAAGCCAAGACAATGAGTCGTaGAGCTGGGTCTCTAACTTGCTGTGTGACCTCAGG +
Preference number: 6 (lower is better)
Translates to: QDDEGQSQDNES*SWVSNLLCDLR
Trigger: CCTGAGGTCACACAGCAAGTTAGAGACCCAGCTCCACGACTCATTGTCTTGGCTTTGGCCCTCGTCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000535347.5
ENST00000536116.5
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp ATCAGGTCTCCAGGAGAGTCCCAAGGCAGCTGCTTATaGGAAAGCCAAGAGAGCCGGGACCTGAAAGGGAAA +
Preference number: 6 (lower is better)
Translates to: IRSPGESQGSCL*ESQESRDLKGK
Trigger: TTTCCCTTTCAGGTCCCGGCTCTCTTGGCTTTCCCATAAGCAGCTGCCTTGGGACTCTCCTGGAGACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535347.5
ENST00000536824.5
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp CTGAAGGTGGACATGACGGATAAATGTGAGTCTCCGTaGACCCGTGTGGGTAGATGTGAGAGCGTTCTCCCC +
Preference number: 6 (lower is better)
Translates to: LKVDMTDKCESP*TRVGRCESVLP
Trigger: GGGGAGAACGCTCTCACATCTACCCACACGGGTCCACGGAGACTCACATTTATCCGTCATGTCCACCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CAA 72 bp TTACCCTGTTCCTCCCAGCGCAGAATCCCATGTGACTaGTCCAGGGACTCCCAGACAGAAAGAAGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: LPCSSQRRIPCD*SRDSQTERSRV
Trigger: CACACGGCTTCTTTCTGTCTGGGAGTCCCTGGACAAGTCACATGGGATTCTGCGCTGGGAGGAACAGGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684302.1
CDS CAA 90 bp GTTCACGCCTTACCCTGTTCCTCCCAGCGCAGAATCCCATGTGACTaGTCCAGGGACTCCCAGACAGAAAGAAGCCGTGTGTGTATGTGT +
Preference number: 6 (lower is better)
Translates to: VHALPCSSQRRIPCD*SRDSQTERSRVCMC
Trigger: ACACATACACACACGGCTTCTTTCTGTCTGGGAGTCCCTGGACAAGTCACATGGGATTCTGCGCTGGGAGGAACAGGGTAAGGCGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684302.1
CDS CCA 72 bp GACGAGGGCCAAAGCCAAGACAATGAGTCGTGGAGCTaGGTCTCTAACTTGCTGTGTGACCTCAGGCAAATC +
Preference number: 6 (lower is better)
Translates to: DEGQSQDNESWS*VSNLLCDLRQI
Trigger: GATTTGCCTGAGGTCACACAGCAAGTTAGAGACCCAGCTCCACGACTCATTGTCTTGGCTTTGGCCCTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359674.8
ENST00000535347.5
ENST00000536116.5
ENST00000537826.1
ENST00000684302.1
CDS CCA 72 bp AGCAGCTCTGGGCAGCAAGACAATGAGTCGTGGAGCTaGGTCTCTAACTTGCTGTGTGACCTCAGGCAAATC +
Preference number: 6 (lower is better)
Translates to: SSSGQQDNESWS*VSNLLCDLRQI
Trigger: GATTTGCCTGAGGTCACACAGCAAGTTAGAGACCCAGCTCCACGACTCATTGTCTTGCTGCCCAGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424061.6
CDS CCA 72 bp ATGCAGTCCCTGAGGGTCCTTGAGGCGGAACAAATCTaGCTTCAAGTAGTAGATGATGCCCTGGTAGGCTCC +
Preference number: 6 (lower is better)
Translates to: MQSLRVLEAEQI*LQVVDDALVGS
Trigger: GGAGCCTACCAGGGCATCATCTACTACTTGAAGCCAGATTTGTTCCGCCTCAAGGACCCTCAGGGACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542825.5
CDS TCA 72 bp GCCCAGAACTCGTCTCTCCCAGAATTCCATGACAGGTaGGGTAAAATTCTCAAATGGGGTCACTGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: AQNSSLPEFHDR*GKILKWGHCAG
Trigger: GCCGGCACAGTGACCCCATTTGAGAATTTTACCTCACCTGTCATGGAATTCTGGGAGAGACGAGTTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000540094.1
ENST00000684302.1
CDS CCA 72 bp ACTCTAAGTTTCCCTGTGATCATTTATTGCAGTTCCTaGGCCCTCGGGAATGCCCCGAGGTTTCTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: TLSFPVIIYCSS*ALGNAPRFLLS
Trigger: GGACAGGAGAAACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGGAAACTTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS CAA 72 bp CCCTCTCTGAACTCTAAGTTTCCCTGTGATCATTTATaGCAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTT +
Preference number: 6 (lower is better)
Translates to: PSLNSKFPCDHL*QFLGPRECPEV
Trigger: AACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGGAAACTTAGAGTTCAGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS CAA 90 bp AATCACACCCCCTCTCTGAACTCTAAGTTTCCCTGTGATCATTTATaGCAGTTCCTGGGCCCTCGGGAATGCCCCGAGGTTTCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: NHTPSLNSKFPCDHL*QFLGPRECPEVSPV
Trigger: GACAGGAGAAACCTCGGGGCATTCCCGAGGGCCCAGGAACTGCAATAAATGATCACAGGGAAACTTAGAGTTCAGAGAGGGGGTGTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359674.8
CDS GCA 72 bp TGTCATAGAAACGGTCCGCCCCATACACCCAGCTTATaGAGACCACTTCAAACAATGACAGGAACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: CHRNGPPHTPSL*RPLQTMTGTAG
Trigger: GCCTGCTGTTCCTGTCATTGTTTGAAGTGGTCTGCATAAGCTGGGTGTATGGGGCGGACCGTTTCTATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000536824.5
ENST00000545058.5
ENST00000684302.1
CDS CAA 72 bp CAGGATGACGAGGGCCAAAGCCTTAGTTTTCTGAGTTaGCAGATGAGGAAATCCAGGCCTTGGCAGATGAAG +
Preference number: 6 (lower is better)
Translates to: QDDEGQSLSFLS*QMRKSRPWQMK
Trigger: CTTCATCTGCCAAGGCCTGGATTTCCTCATCTGCAAACTCAGAAAACTAAGGCTTTGGCCCTCGTCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397296.6
ENST00000424061.6
CDS CCA 72 bp AATATGAGCATGATAAAGAACAGGCAGGACCACAGCTaGGATAAGGGCATCATAGTCACAGCCTTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: NMSMIKNRQDHS*DKGIIVTALGK
Trigger: CTTCCCCAAGGCTGTGACTATGATGCCCTTATCCCAGCTGTGGTCCTGCCTGTTCTTTATCATGCTCATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359674.8
ENST00000397296.6
ENST00000424061.6
ENST00000535498.5
ENST00000536824.5
ENST00000542825.5
ENST00000684302.1
CDS CCA 72 bp AGCCTCCCGAAGTGCTCACTACTTAACGAAGGACTGTaGACCTTTCAGAACAGCCTGGCTGAAAAATCAATG +
Preference number: 6 (lower is better)
Translates to: SLPKCSLLNEGL*TFQNSLAEKSM
Trigger: CATTGATTTTTCAGCCAGGCTGTTCTGAAAGGTCCACAGTCCTTCGTTAAGTAGTGAGCACTTCGGGAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538272.5
CDS CCA 72 bp CTCAGACATCCAAATTTCCTCTTCATATGTGGCAAATaGGCCCAGCACCTACTCCCAGAATTCCATGACAGG +
Preference number: 6 (lower is better)
Translates to: LRHPNFLFICGK*AQHLLPEFHDR
Trigger: CCTGTCATGGAATTCTGGGAGTAGGTGCTGGGCCCATTTGCCACATATGAAGAGGAAATTTGGATGTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CCA 72 bp TGCACAGCTCAGACATCCAAATTTCCTCTTCATATGTaGCAAATGGGCCCAGCACCTACTCCCAGAATTCCA +
Preference number: 6 (lower is better)
Translates to: CTAQTSKFPLHM*QMGPAPTPRIP
Trigger: TGGAATTCTGGGAGTAGGTGCTGGGCCCATTTGCCACATATGAAGAGGAAATTTGGATGTCTGAGCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CAA 72 bp GAGGAAGTGCTGGAAAGCACACACAGAATCTTAAACTaGCACCCCAGACATTCAGACTTGCACAGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: EEVLESTHRILN*HPRHSDLHSSD
Trigger: GTCTGAGCTGTGCAAGTCTGAATGTCTGGGGTGCAAGTTTAAGATTCTGTGTGTGCTTTCCAGCACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CAA 90 bp GAAAGCACACACAGAATCTTAAACTTGCACCCCAGACATTCAGACTaGCACAGCTCAGACATCCAAATTTCCTCTTCATATGTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: ESTHRILNLHPRHSD*HSSDIQISSSYVAN
Trigger: ATTTGCCACATATGAAGAGGAAATTTGGATGTCTGAGCTGTGCAAGTCTGAATGTCTGGGGTGCAAGTTTAAGATTCTGTGTGTGCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538580.1
CDS CAA 72 bp CACAGAATCTTAAACTTGCACCCCAGACATTCAGACTaGCACAGCTCAGACATCCAAATTTCCTCTTCATAT +
Preference number: 6 (lower is better)
Translates to: HRILNLHPRHSD*HSSDIQISSSY
Trigger: ATATGAAGAGGAAATTTGGATGTCTGAGCTGTGCAAGTCTGAATGTCTGGGGTGCAAGTTTAAGATTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538580.1