RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC66A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122490

Ensembl transcript IDs: ENST00000351365.7, ENST00000357575.8, ENST00000397778.7, ENST00000466449.5, ENST00000469369.5, ENST00000474967.5, ENST00000478144.5, ENST00000494607.5, ENST00000589000.5, ENST00000589452.1, ENST00000590381.5, ENST00000590895.1, ENST00000591964.5, ENST00000593030.6

Found 665 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: PYRVSCGHPSFKVRG*WPVCPPGAGSCRPP
Trigger: GGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 90 bp GGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCCCCTCAGCCATTGCCCATGAGGGCC +
Preference number: 1 (lower is better)
Translates to: GISASRAQEWRADCM*TASARPPQPLPMRA
Trigger: GGCCCTCATGGGCAATGGCTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp TGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGT +
Preference number: 1 (lower is better)
Translates to: CHGVEGSAHRPYRVS*GHPSFKVRGCWPVC
Trigger: ACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGAGCCCTCGACCCCGTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 90 bp AGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCCCGGCCCCCTCAGCCATTGCCCATG +
Preference number: 1 (lower is better)
Translates to: RKGISASRAQEWRAD*MCTASARPPQPLPM
Trigger: CATGGGCAATGGCTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp GATGCCTGCGGGAAGCGGCCCCTCCACCTGCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCTGG +
Preference number: 1 (lower is better)
Translates to: DACGKRPLHLRKGRR*LLEPHGSIQNSEAW
Trigger: CCAGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCTTCCCGCAGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 90 bp TACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAT +
Preference number: 1 (lower is better)
Translates to: YRVSCGHPSFKVRGC*PVCPPGAGSCRPPN
Trigger: ATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR CCA 90 bp TCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCTCAG +
Preference number: 1 (lower is better)
Translates to: SAPRRKGISASRAQE*RADCMCTASARPPQ
Trigger: CTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR TCA 90 bp AGCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGGAGAA +
Preference number: 1 (lower is better)
Translates to: SPAPSAIAHEGLHVV*WSLASATSPRTRGE
Trigger: TTCTCCTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR TCA 90 bp ACTGCATGTGCACAGCCTCAGCCCGGCCCCCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTC +
Preference number: 1 (lower is better)
Translates to: TACAQPQPGPLSHCP*GPPRCLMVAGICHV
Trigger: GACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp ACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCTCAGCCATT +
Preference number: 1 (lower is better)
Translates to: TQKEGDLRQQSPRVA*RLHVHSLSPAPSAI
Trigger: AATGGCTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTaGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAG +
Preference number: 1 (lower is better)
Translates to: SPQLQGSRLLARVST*SRFLQAAQCVPWAQ
Trigger: CTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR CCA 90 bp TTCCGAGGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATaGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGC +
Preference number: 1 (lower is better)
Translates to: FRGKLEEEAAWNIFP*PRPRHRAQMPAGSG
Trigger: GCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR TCA 90 bp GCTGGCATCTGCCACGTCCCCAAGGACTCGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCT +
Preference number: 1 (lower is better)
Translates to: AGICHVPKDSRRTRG*QEQHELALAMLSRA
Trigger: AGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCTCGAGTCCTTGGGGACGTGGCAGATGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR TCA 90 bp CCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGA +
Preference number: 1 (lower is better)
Translates to: PKAQETPTVRKPGAR*PCVRTAAFPCVPGR
Trigger: TCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 90 bp CCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAAGGACTCGAGGAGAACCAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: PQPLPMRASTLSDGR*HLPRPQGLEENQRL
Trigger: CAGCCTCTGGTTCTCCTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp AAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATA +
Preference number: 1 (lower is better)
Translates to: KVRGCWPVCPPGAGS*RPPNVYLGLRRCFI
Trigger: TATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 90 bp AGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCC +
Preference number: 1 (lower is better)
Translates to: RPSLLEDGHQNCIRR*SLHPEGRGSPPAEP
Trigger: GGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp TCCCTGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCG +
Preference number: 1 (lower is better)
Translates to: SLDPRPSLLEDGHQN*IRRCSLHPEGRGSP
Trigger: CGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTaGACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTG +
Preference number: 1 (lower is better)
Translates to: LSWKMDIKTASGGAV*TQKEGDLRQQSPRV
Trigger: CACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 90 bp GGGAGGAGCTGGGTAAGGAAAACGCTGGCTGAGGCTGACCTGGGGTaGCTCAGACAGCGGGAAATGAGATCTCTAAGTTCAGTCAGGAGA +
Preference number: 1 (lower is better)
Translates to: GRSWVRKTLAEADLG*LRQREMRSLSSVRR
Trigger: TCTCCTGACTGAACTTAGAGATCTCATTTCCCGCTGTCTGAGCCACCCCAGGTCAGCCTCAGCCAGCGTTTTCCTTACCCAGCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593030.6
3UTR CCA 90 bp GTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGAAAACACTTG +
Preference number: 1 (lower is better)
Translates to: VSTWSRFLQAAQCVP*AQTVFHKRKWGKHL
Trigger: CAAGTGTTTTCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGTTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCGTTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 2 (lower is better)
Translates to: RGEVRAHQCPRLAVPHPRSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...ACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR TCA 90 bp CGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTAGCCCGCCACGCCCGTaGAGGCCAGGACGCACTGCA +
Preference number: 2 (lower is better)
Translates to: RLLARVSTWSRFLQAAQCSPPRP*RPGRTA
Trigger: TGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCT...ACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR GCA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGGGTGGGGGCAGAGCGTaGGGTGACAAGGGTCAGACT +
Preference number: 2 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQGGGRA*GDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACC...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCATTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 2 (lower is better)
Translates to: GPDQPWLSPLSTNSVPAPLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...TGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR TCA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR TCA 90 bp GCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: AQPGWTQRIHKAFRPRSHKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...GTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCACCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR CAA 90 bp TGCGGGAAGCGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCG +
Preference number: 2 (lower is better)
Translates to: CGKRPLHLRKGRRCL*EPHGSIQNSEAWGP
Trigger: CGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCTTCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CAA 90 bp GCCTCAGCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAG +
Preference number: 2 (lower is better)
Translates to: ASARPPQPLPMRAST*SDGRWHLPRPQGLE
Trigger: CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGCTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp CCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: PEVQSAPRRKGISASRAQKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...TTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp CCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: PSRVSGQGVTGSRAPLTGFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...GCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp CGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAAGCGGCCCCTCCACCTaGGGAAGGGAAGACGATGCC +
Preference number: 2 (lower is better)
Translates to: RTEASRTLRPGGRLRSVQSGPST*GREDDA
Trigger: GGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCT...TTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 2 (lower is better)
Translates to: SRLLARVSTWSRFLQAAQEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...TTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR GCA 90 bp GCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACCCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: AQPGWTQRIHKAFRPRSHPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...GTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR CAA 90 bp GGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGAGCGTGCGGTGACAAGGGTCAGACT +
Preference number: 2 (lower is better)
Translates to: GPAAVSARLLTWCDL*QRGGGRACGDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR TCA 90 bp TGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTTACAGGGTGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 2 (lower is better)
Translates to: CLARVSRGRGLRSQALQGGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...ACCCTGTAAGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp CCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCAATGGACAGGTAGGTaGTGTAGCCCGCCACGCCCG +
Preference number: 2 (lower is better)
Translates to: PQLQGSRLLARVSTWSRFQWTGR*CSPPRP
Trigger: CGGGCGTGGCGGGCTACATCACCTACCTGTCCATTG...GAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR GCA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPRPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp GCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 2 (lower is better)
Translates to: AEPKSGVQTACAQPQPGPMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...GGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp ATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGCCATCGGCCAGGACCTaGACGGCAGGGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: IPSRHTGYIQQSLRLQSAPSART*TAGAAP
Trigger: GGGGGCTGCCCCTGCCGTGCAGGTCCTGGCCGATGG...CGCCGACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR GCA 90 bp ATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACAAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 2 (lower is better)
Translates to: IQNSEAWGPAAVSARLLTRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...TGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp CGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCTGGGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 2 (lower is better)
Translates to: RPPQPLPMRASTLSDGRWGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...CCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp GGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 2 (lower is better)
Translates to: GLTGSPAVTPASRFAAAGSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...GCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp TCCCATGGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGCCCCTTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: SHGHGPGTELRCLREAAPLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp AAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTCTCCACTGCCAGAAGTaGTGGGGGTCGAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: KQGVWPGCHGVEGSAHRPLHCQK*WGSKSR
Trigger: CCTGGACTTCGACCCCCACCACTTCTGGCAGTGGAG...AGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR CAA 90 bp CGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCTGGCATCTG +
Preference number: 2 (lower is better)
Translates to: RADCMCTASARPPQP*PMRASTLSDGRWHL
Trigger: CAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCTGACAAGAGCAGCATaGGCTAGCCCTGGCGATGCT +
Preference number: 2 (lower is better)
Translates to: AEPKSGVQTACAQPQPGPLTRAA*ASPGDA
Trigger: AGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAG...GGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCAAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 2 (lower is better)
Translates to: ARWPHGPRCTASASAAWSSGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...TGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
3UTR-3UTR TCA 90 bp ACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 2 (lower is better)
Translates to: TGSPAVTPASRFAAAGPCGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...ACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp CGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAACATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: RTEASRTLRPGGRLRSVQHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...TTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAACGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 2 (lower is better)
Translates to: RTEASRTLRPGGRLRSVQRKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...TTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 2 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp AGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 2 (lower is better)
Translates to: RPYRVSCGHPSFKVRGCWSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...CCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp CGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 2 (lower is better)
Translates to: RPHSRLSVCTRQRKPQPSDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...GGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp AGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 2 (lower is better)
Translates to: RPYRVSCGHPSFKVRGCWTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...CCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR TCA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp ATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACAACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: IQNSEAWGPAAVSARLLTTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...TGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGGGGCAGAGCGTGCGGTaGCAAGGGTCAGACTGGCGG +
Preference number: 2 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLGQSVR*QGSDWR
Trigger: CCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCC...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CGAGGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: RGKLEEEAAWNIFPWPRPHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...GGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGACCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 2 (lower is better)
Translates to: QEQHELALAMLSRAGHSGPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 2 (lower is better)
Translates to: PASRFAAAGPCVHLEQVPPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...AGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 2 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPREWRAD*MCTASA
Trigger: GGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTC...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCATCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 2 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 2 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp ATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGAACATCTTCCCATaGCCACGGCCCCGGCACAGA +
Preference number: 2 (lower is better)
Translates to: IQNSEAWGPAAVSARLLTWNIFP*PRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCA...TGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTGGGGCACACCCAGCATaGCTTCGGTCAGCACAGCCA +
Preference number: 2 (lower is better)
Translates to: RVSTWSRFLQAAQCVPWAGAHPA*LRSAQP
Trigger: TGGCTGTGCTGACCGAAGCCATGCTGGGTGTGCCCC...AGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR TCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGAGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 2 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp TGCCTGTTGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTTCAGTGCAAGGCTGCTaGCATGGTGTGACCTCTTGC +
Preference number: 2 (lower is better)
Translates to: CLLEPHGSIQNSEAWGPASVQGC*HGVTSC
Trigger: GCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGA...AGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 2 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp CCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: PASRFAAAGPCVHLEQVPPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...AGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR GCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 2 (lower is better)
Translates to: SGLAATPKAQETPTVRKPRADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 2 (lower is better)
Translates to: SKLHPEVQSAPRRKGISARADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCACATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp AATGGACAGGTAGGTGATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 2 (lower is better)
Translates to: NGQVGDVARHAREGQDALEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...CAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCACCTACCTGTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
3UTR-3UTR GCA 90 bp CAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGCCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: QASQPLQRPRKHRLSENPPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...CGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGCCGAGATTGTACCACTaGACTCCAGCCTGGCGACAG +
Preference number: 2 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPRPRLYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGTACAATCTCGG...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474967.5
3UTR-3UTR TCA 90 bp GCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: ASQPLQRPRKHRLSENPETPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...CTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTAT +
Preference number: 2 (lower is better)
Translates to: VKERRLALSSLATRTSVHAWGQP*LLHPCY
Trigger: ATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGC...GTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR-3UTR TCA 90 bp CGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RSQALQGLLRSPQLQGSRGRRIT*TQESEA
Trigger: AGCCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...CCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474967.5
3UTR-3UTR GCA 90 bp GAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: EVQSAPRRKGISASRAQEPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...CTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGAAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: QEQHELALAMLSRAGHSGNCIRR*SLHPEG
Trigger: TCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTT...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: RLLARVSTWSRFLQAAQCAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...ACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp CAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: QSPRVACRLHVHSLSPAPAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...GGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp ATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 2 (lower is better)
Translates to: IPSRHTGYIQQSLRLQSASKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...CGCCGACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR CCA 90 bp CCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PCVHLEQVPAGRPMCTLGLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...GCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACACAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: QHELALAMLSRAGHSGSTQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474967.5
3UTR CAA 90 bp TTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: LLSAAVKERRLALSS*ATRTSVHSFSISSM
Trigger: CATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR CAA 90 bp CACCATCTTGATGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: HHLDAVKERRLALSS*ATRTSVHSFSISSM
Trigger: CATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCATCAAGATGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474967.5
3UTR-3UTR TCA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 2 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKSGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 2 (lower is better)
Translates to: SKLHPEVQSAPRRKGISAPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCAGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: CSAGLDTADPQGVQASQPDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...TGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 2 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 2 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGAGGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: RGKLEEEAAWNIFPWPRPLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...GGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAGAGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: STCGREDDACWSRTEASREDDAC*SRTEAS
Trigger: GGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTC...TCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CAA 90 bp TCTTCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATC +
Preference number: 2 (lower is better)
Translates to: SSSLLSAAVKERRLA*SSLATRTSVHSFSI
Trigger: GATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR CAA 90 bp AAGTGGTGGGGGTCGAAGTCCAGGAAGGACCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGC +
Preference number: 2 (lower is better)
Translates to: KWWGSKSRKDRLGAT*TSSSLLSAAVKERR
Trigger: GCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGACTTCGACCCCCACCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR TCA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR TCA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 2 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR TCA 90 bp TCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: STWSRFLQAAQCVPWAQTRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...CGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp CTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCAGGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: LVGHTDLGAQLQHQQHGQGRRIT*TQESEA
Trigger: AGCCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...CTGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474967.5
ENST00000589452.1
3UTR-3UTR GCA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGGCCTGGGGGCCGGCTaGGGTCAGTGCAAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAGLGAG*GQCKAA
Trigger: AGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCC...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR CCA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp TGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCAGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 2 (lower is better)
Translates to: CSAGLDTADPQGVQASQPVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...TGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 2 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACCAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LAICSCKGAAPGVELVGHQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589452.1
3UTR CAA 90 bp CATATTCAAAGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: HIQSTVKERRLALSS*ATRTSVHSFSISSM
Trigger: CATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCTTTGAATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR-3UTR TCA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 2 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 2 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp ACTCCCTGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: TPWTRDRLSWKMDIKTASFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...GGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCAGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 2 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHRKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR GCA 90 bp GACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACTGGTGGCGGTGGTTaGGGTAAAGCTGGGGCACAC +
Preference number: 2 (lower is better)
Translates to: DRLSWKMDIKTASGGAVCTGGGG*GKAGAH
Trigger: GTGTGCCCCAGCTTTACCGCAACCACCGCCACCAGT...GCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR GCA 90 bp TCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGCCGAGATTGTACCACTaGACTCCAGCCTGGCGACAG +
Preference number: 2 (lower is better)
Translates to: SSLLSAAVKERRLALSSLPRLYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGTACAATCTCGG...CAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589452.1
3UTR-3UTR CCA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CCA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 2 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR CCA 90 bp CCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 2 (lower is better)
Translates to: PRPSLLEDGHQNCIRRCSDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...ACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 2 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACAGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 2 (lower is better)
Translates to: QHELALAMLSRAGHSGSTVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATGCTCATGCCCTCCGTaGACTGGTGGCGGTGGTTGC +
Preference number: 2 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQCSCPP*TGGGGC
Trigger: GCAACCACCGCCACCAGTCCACGGAGGGCATGAGCA...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR CCA 90 bp GATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAATCTCATCAGAAACAATaGAGTCCAGAGGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: DVARHAREGQDALHVVRESHQKQ*SPEGSG
Trigger: TCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGA...TTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR-3UTR TCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAAGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 2 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR GCA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 2 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR CCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 2 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCCACTGCCAGAAGTGGTaGGGGTCGAAGTCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVHCQKW*GSKSRK
Trigger: CTTCCTGGACTTCGACCCCCACCACTTCTGGCAGTG...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR CCA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCA +
Preference number: 2 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPEEEAA*NIFPWP
Trigger: TGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTC...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR TCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 2 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSAKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR TCA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 2 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR GCA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCACATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR TCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 2 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 2 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 2 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR TCA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGCCACAAATGGTTTATTaGTTCCAAGTCGCCACACAG +
Preference number: 2 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPPQMVY*FQVATQ
Trigger: CTGTGTGGCGACTTGGAATCAATAAACCATTTGTGG...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR GCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCACCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSAPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR-3UTR CCA 90 bp CATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATAACATATTCAAAGCACTGTCAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: HQKQWSPEGSGITYSKHCQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...ACAGTGCTTTGAATATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR CCA 72 bp CCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTCCTCCCCACTGTCAGA +
Preference number: 3 (lower is better)
Translates to: PAGRSGPTSARG*RSHILVLPTVR
Trigger: TCTGACAGTGGGGAGGACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CAA 90 bp CAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 3 (lower is better)
Translates to: QGLLRSPQLQGSRLLARVERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...CACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR TCA 72 bp GCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGGGGGCAGAGCGTGCGG +
Preference number: 3 (lower is better)
Translates to: AGCGQCKAADMV*PLATGWGQSVR
Trigger: CCGCACGCTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 72 bp GAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGCCTCAGCCCGGCCCCC +
Preference number: 3 (lower is better)
Translates to: EGDLRQQSPRVA*RLHVHSLSPAP
Trigger: GGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 3 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRRPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 3 (lower is better)
Translates to: CSAGLDTADPQGVQASQPLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...TGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR GCA 72 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTACCTTGGGCTCAGACGG +
Preference number: 3 (lower is better)
Translates to: GCWPVCPPGAGS*RPPNVYLGLRR
Trigger: CCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 72 bp GTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: VSCGHPSFKVRG*WPVCPPGAGSC
Trigger: GCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 72 bp GTCGAGGGCTCCGCTCACAGGCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: VEGSAHRPYRVS*GHPSFKVRGCW
Trigger: CCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGAGCCCTCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR CCA 72 bp TCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SCGHPSFKVRGC*PVCPPGAGSCR
Trigger: CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CAA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 3 (lower is better)
Translates to: SKLHPEVQSAPRRKGISARPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 3 (lower is better)
Translates to: LTGLTGSPAVTPASRFAALALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...AGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 3 (lower is better)
Translates to: RVSTWSRFLQAAQCVPWAHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...AGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CAA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 3 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000590381.5
3UTR GCA 72 bp GGGAAGCGGCCCCTCCACCTGCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGAAGCATCCAGAACTCT +
Preference number: 3 (lower is better)
Translates to: GKRPLHLRKGRR*LLEPHGSIQNS
Trigger: AGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 72 bp CTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTaGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCT +
Preference number: 3 (lower is better)
Translates to: LQGSRLLARVST*SRFLQAAQCVP
Trigger: AGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR CCA 72 bp AGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGG +
Preference number: 3 (lower is better)
Translates to: RRKGISASRAQE*RADCMCTASAR
Trigger: CCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 72 bp GGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: GPSTCGREDDAC*SRTEASRTLRP
Trigger: AGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 72 bp AAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATaGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCG +
Preference number: 3 (lower is better)
Translates to: KLEEEAAWNIFP*PRPRHRAQMPA
Trigger: CGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp GCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 3 (lower is better)
Translates to: AGSCRPPNVYLGLRRCFIERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...TATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 3 (lower is better)
Translates to: SSLLSAAVKERRLALSSLERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...CAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR-3UTR CAA 90 bp TATTCAAAGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 3 (lower is better)
Translates to: YSKHCKGAAPGVELVGHTERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...CGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCTTTGAATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR-3UTR CAA 90 bp CAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCCACATGAGCACCATCTaGATGCTCATGCCCTCCGTG +
Preference number: 3 (lower is better)
Translates to: QSPRVACRLHVHSLSPAPHMSTI*MLMPSV
Trigger: CACGGAGGGCATGAGCATCAAGATGGTGCTCATGTG...GGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR-3UTR CAA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCAT +
Preference number: 3 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCMRAST*SDGRWH
Trigger: ATGCCAGCGACCATCAGACAACGTGGAGGCCCTCAT...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTTACAGGGTCCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: CLARVSRGRGLRSQALQGPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...ACCCTGTAAGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR TCA 72 bp CCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCCACGTCCCCAAGGACT +
Preference number: 3 (lower is better)
Translates to: PSAIAHEGLHVV*WSLASATSPRT
Trigger: AGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGACCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: QEQHELALAMLSRAGHSGPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CAGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 3 (lower is better)
Translates to: QLQHQQHGQDHDGALPQQLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...CTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
3UTR-3UTR CAA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGTTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 3 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR TCA 72 bp CAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCCGCCTTTCCGTGTGTA +
Preference number: 3 (lower is better)
Translates to: QETPTVRKPGAR*PCVRTAAFPCV
Trigger: TACACACGGAAAGGCGGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CCA 72 bp GAGTGTTTCCGAGGAAAACTCGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCACGGCCCCGGCACAGA +
Preference number: 3 (lower is better)
Translates to: ECFRGKLEEEAA*NIFPWPRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCGGAAACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCACGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CAA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLTWCDL*QRGGGR
Trigger: TCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGT...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 3 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp CTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTA +
Preference number: 3 (lower is better)
Translates to: LAICSCKGAAPGVELVGHRLGAT*TSSSLL
Trigger: TAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCG...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR CCA 72 bp CCACTCCCTGGACCCGAGACCGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCGGAGGTGCAGTCTGCA +
Preference number: 3 (lower is better)
Translates to: PLPGPETVSPGR*TSKLHPEVQSA
Trigger: TGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCAGGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATC +
Preference number: 3 (lower is better)
Translates to: SWKMDIKTASGGAVCTQKGRRCL*EPHGSI
Trigger: GATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCC...CTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 72 bp AAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTaGACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGC +
Preference number: 3 (lower is better)
Translates to: KMDIKTASGGAV*TQKEGDLRQQS
Trigger: GCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 72 bp CTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCA +
Preference number: 3 (lower is better)
Translates to: LLEDGHQNCIRR*SLHPEGRGSPP
Trigger: TGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 72 bp CCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: PRPSLLEDGHQN*IRRCSLHPEGR
Trigger: CCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR-3UTR CAA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTCCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 3 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR GCA 72 bp GTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTaGAGTCGGCGACAGTTTAATGTGAGGCAATTACCG +
Preference number: 3 (lower is better)
Translates to: VATQGTFSSHCA*SRRQFNVRQLP
Trigger: CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR CCA 72 bp TGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGA +
Preference number: 3 (lower is better)
Translates to: WSRFLQAAQCVP*AQTVFHKRKWG
Trigger: TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
3UTR-3UTR CAA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTA +
Preference number: 3 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVRLGAT*TSSSLL
Trigger: TAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCG...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
3UTR CCA 72 bp TGGGTAAGGAAAACGCTGGCTGAGGCTGACCTGGGGTaGCTCAGACAGCGGGAAATGAGATCTCTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: WVRKTLAEADLG*LRQREMRSLSS
Trigger: TGAACTTAGAGATCTCATTTCCCGCTGTCTGAGCCACCCCAGGTCAGCCTCAGCCAGCGTTTTCCTTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593030.6
3UTR-3UTR CAA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCTTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 3 (lower is better)
Translates to: SSLATRTSVHSFSISSMVLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
3UTR-3UTR CAA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCACGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPARPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
3UTR TCA 72 bp GCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTaGGGCAATTACCGCTACAGACATCTTGCTTCATCT +
Preference number: 3 (lower is better)
Translates to: AVTAPAVGDSLM*GNYRYRHLASS
Trigger: AGATGAAGCAAGATGTCTGTAGCGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCAGGGCAGAGCGTGCGGTaGCAAGGGTCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPGQSVR*QGSDWR
Trigger: CCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCC...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCGTCTTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGRSGPTSARGWRSHILVLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: PRGEVRAHQCPRLAVPHPSGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...AGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCGGGCAGAGCGTGCGGTaGCAAGGGTCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSGQSVR*QGSDWR
Trigger: CCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCC...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCAGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCCCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PAGRSGPTSARGWRSHILPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...GAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCAGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPEWRAD*MCTASA
Trigger: GGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTC...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCCACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AQPGWTQRIHKAFRPRSHLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...GTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCGTGGTGGGGGCAGAGCGTaGGGTGACAAGGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: RGEVRAHQCPRLAVPHPRGGGRA*GDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACC...ACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCCATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PAGRSGPTSARGWRSHILHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...GAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGGGGCCTTGGTGCCAGTaGGGTGCACGGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AAPPPAEGKTMPVGAARKGPWCQ*GARRGA
Trigger: CGCCCCACGCCGTGCACCCCACTGGCACCAAGGCCC...CTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCGGGCCTTGGTGCCAGTaGGGTGCACGGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GSPAVTPASRFAAAGPCVGPWCQ*GARRGA
Trigger: CGCCCCACGCCGTGCACCCCACTGGCACCAAGGCCC...GACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCTGACAAGAGCAGCATaGGCTAGCCCTGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: PRGEVRAHQCPRLAVPHPLTRAA*ASPGDA
Trigger: AGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAG...AGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCGTAAGCCGTCGGCGTTCTaGGTCCTGCGAATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: RGEVRAHQCPRLAVPHPRKPSAF*VLRMSR
Trigger: TCGGGACATTCGCAGGACGCAGAACGCCGACGGCTT...ACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCTTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PQLQGSRLLARVSTWSRFLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...GAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGGGCCTGGGGGCCGGCTaGGGTCAGTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QGLLRSPQLQGSRLLARVGLGAG*GQCKAA
Trigger: AGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCC...CACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAGAACTCTGAGGCCTaGGGGCCGGCTGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GSRLLARVSTWSRFLQAAQNSEA*GPAAVS
Trigger: ACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTG...GGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCACCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGCACTGCAGCCAGAAGTaGGGGAGCCAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQHCSQK*GSQHTG
Trigger: CCCCGTGTGCTGGCTCCCTCACTTCTGGCTGCAGTG...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCCATGGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGCCCCTCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SHGHGPGTELRCLREAAPHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSNCIRR*SLHPEG
Trigger: TCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTT...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACACCATCGGCCAGGACCTaGACGGCAGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QHELALAMLSRAGHSGSTPSART*TAGAAP
Trigger: GGGGGCTGCCCCTGCCGTGCAGGTCCTGGCCGATGG...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCCATGGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGCCCCTCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SHGHGPGTELRCLREAAPQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGGCCAGCACACGGGGGTaGGCAGTGGACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQASTRG*AVDRTG
Trigger: TCCTGTCCTGTCCACTGCCCACCCCCGTGTGCTGGC...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRSGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSAWGQP*LLHPCY
Trigger: ATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGC...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR TCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGAAGCCCGCCACGCCCGTaGAGGCCAGGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QEQHELALAMLSRAGHSGSPPRP*RPGRTA
Trigger: TGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCT...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp GCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AEPKSGVQTACAQPQPGPPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...GGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGCACTGCAGCCAGAAGTaGGGGAGCCAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: PAVTPASRFAAAGPCVHLHCSQK*GSQHTG
Trigger: CCCCGTGTGCTGGCTCCCTCACTTCTGGCTGCAGTG...CAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCTTGGTGCCAGTGGGGTaGACGGCGTGGGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRLVPVG*TAWGAG
Trigger: GCCGGCGCCCCACGCCGTGCACCCCACTGGCACCAA...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AEPKSGVQTACAQPQPGPPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...GGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCCCCACTCAGGAATTTaGTTCAGGCCAAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGEVRAHQCPRLAVPHPPHSGI*FRPKAQ
Trigger: CTGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGG...AGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCGGCCTGGGGGCCGGCTaGGGTCAGTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PCVHLEQVPAGRPMCTLGGLGAG*GQCKAA
Trigger: AGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCC...GCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCAGCGGCCCCTCCACCTaGGGAAGGGAAGACGATGCC +
Preference number: 4 (lower is better)
Translates to: GSPAVTPASRFAAAGPCVSGPST*GREDDA
Trigger: GGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCT...GACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCAGAGCTCAGATGCCTaGGGGAAGCGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AEPKSGVQTACAQPQPGPQSSDA*GKRPLH
Trigger: GTGGAGGGGCCGCTTCCCGCAGGCATCTGAGCTCTG...GGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 4 (lower is better)
Translates to: PSRVSGQGVTGSRAPLTGSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...GCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp TGCGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: CVRTAAFPCVPGRESPSPIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...AGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCACACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp ATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACAAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: IQNSEAWGPAAVSARLLTSGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...TGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AATGGACAGGTAGGTGATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGAGCCCGCCACGCCCGTaGAGGCCAGGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: NGQVGDVARHAREGQDALSPPRP*RPGRTA
Trigger: TGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCT...CAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCACCTACCTGTCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR TCA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPRKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: QPGWTQRIHKAFRPRSHSGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...GGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCAGGCGACAGTTTAATGTaGGGCAATTACCGCTACAGA +
Preference number: 4 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPGDSLM*GNYRYR
Trigger: TCTGTAGCGGTAATTGCCTCACATTAAACTGTCGCC...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCCCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp ACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 4 (lower is better)
Translates to: TGSPAVTPASRFAAAGPCRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...ACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RLLARVSTWSRFLQAAQCHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...ACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GGGGGCAGAGCGTGCGGTGACAAGGGTCAGACTGGCGGCTCCCACTGCAGCCAGCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: GGRACGDKGQTGGSHCSQPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...CTGGCTGCAGTGGGAGCCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCACCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp TTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: FAAAGPCVHLEQVPAGRPMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...TGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQNCIRR*SLHPEG
Trigger: TCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTT...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAGACCATCGGCCAGGACCTaGACGGCAGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: STCGREDDACWSRTEASRPSART*TAGAAP
Trigger: GGGGGCTGCCCCTGCCGTGCAGGTCCTGGCCGATGG...TCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCCGGCTGCGGTCAGTaGAAGGCTGCTGACATGGTG +
Preference number: 4 (lower is better)
Translates to: RLLARVSTWSRFLQAAQCAGCGQ*KAADMV
Trigger: CACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGC...ACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TGCCTGTTGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTCAGAGCTCAGATGCCTaGGGGAAGCGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CLLEPHGSIQNSEAWGPAQSSDA*GKRPLH
Trigger: GTGGAGGGGCCGCTTCCCGCAGGCATCTGAGCTCTG...AGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSPAVTPASRFAAAGPCVQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...GACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCTGCTCATGCCCTCCGTaGACTGGTGGCGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRCSCPP*TGGGGC
Trigger: GCAACCACCGCCACCAGTCCACGGAGGGCATGAGCA...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp CAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: QGLLRSPQLQGSRLLARVTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...CACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: PAVTPASRFAAAGPCVHLTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...CAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: PEVQSAPRRKGISASRAQTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...TTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCCAGAACTCTGAGGCCTaGGGGCCGGCTGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RPHSRLSVCTRQRKPQPSQNSEA*GPAAVS
Trigger: ACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTG...GGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGAGCGGCGCCTGGCGTTaGGCTCGTTGGCCACACGGA +
Preference number: 4 (lower is better)
Translates to: ASTLSDGRWHLPRPQGLESGAWR*ARWPHG
Trigger: TCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCT...CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: KQGVWPGCHGVEGSAHRPTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...AGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACTGGTGGCGGTGGTTaGGGTAAAGCTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPTGGGG*GKAGAH
Trigger: GTGTGCCCCAGCTTTACCGCAACCACCGCCACCAGT...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPDQPWLSPLSTNSVPAPPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...TGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GCGGTCAGTGCAAGGCTGCTGACATGGTGTGACCTCTTGCAACGGGGTGGGGGCAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 4 (lower is better)
Translates to: AVSARLLTWCDLLQRGGGRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...GCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PASRFAAAGPCVHLEQVPPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...AGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCRADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp ACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TPASRFAAAGPCVHLEQVRADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...AACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SRLLARVSTWSRFLQAAQSPRVA*RLHVHS
Trigger: GCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCT...TTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCCATGGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGCCCCTAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SHGHGPGTELRCLREAAPNCIRR*SLHPEG
Trigger: TCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTT...AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCTCGTCGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: AGRSGPTSARGWRSHILVDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGAGGCCTGGGGGCCGGCTaGGGTCAGTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRGLGAG*GQCKAA
Trigger: AGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCC...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVRKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGTCCGAGCGGCCCCTCCACCTaGGGAAGGGAAGACGATGCC +
Preference number: 4 (lower is better)
Translates to: GPGNTDCQKTRSTVTLRPSGPST*GREDDA
Trigger: GGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCT...CGGACGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGACAGAGCTCAGATGCCTaGGGGAAGCGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QEQHELALAMLSRAGHSGQSSDA*GKRPLH
Trigger: GTGGAGGGGCCGCTTCCCGCAGGCATCTGAGCTCTG...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: QGLLRSPQLQGSRLLARVRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...CACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCCCAGGCACACGTAGGTaGAGAAGCCGTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QPGWTQRIHKAFRPRSHSPGTRR*RSRRRS
Trigger: AGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGG...GGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCCCAGGCACACGTAGGTaGAGAAGCCGTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPPGTRR*RSRRRS
Trigger: AGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGG...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp TCCCATGGCCACGGCCCCGGCACAGAGCTCAGATGCCTGCGGGAAGCGGCCCCTGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SHGHGPGTELRCLREAAPVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCCGGGGCCGTGGCCATGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LTGLTGSPAVTPASRFAATSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...AGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCAAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GPDQPWLSPLSTNSVPAPKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...TGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 4 (lower is better)
Translates to: VKERRLALSSLATRTSVHSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...GTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 4 (lower is better)
Translates to: ARSTLAVPAEHKQRPSPTSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...GGTGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: QPGWTQRIHKAFRPRSHSDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...GGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: SRLLARVSTWSRFLQAAQSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...TTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCGGTCAGTGCAAGGCTGCTGACATGGTGTGACCTCTTGCAACGGGGTGGGGGCCAGAACTCTGAGGCCTaGGGGCCGGCTGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: AVSARLLTWCDLLQRGGGQNSEA*GPAAVS
Trigger: ACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTG...GCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATGGTGACTCCTGGCTGAGGCTGACCTaGGGTGGCTCAGACAGCGGG +
Preference number: 4 (lower is better)
Translates to: SVRRSRRTRGTPGGHGDSWLRLT*GGSDSG
Trigger: CCCGCTGTCTGAGCCACCCCAGGTCAGCCTCAGCCA...GGAGTCACCATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
3UTR CAA 72 bp CGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RPPQPLPMRAST*SDGRWHLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
3UTR CAA 72 bp CGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RPLHLRKGRRCL*EPHGSIQNSEA
Trigger: GGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PQLQGSRLLARVSTWSRFGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...GAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: HPSFKVRGCWPVCPPGAGTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...ACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp GGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGCTGACAAGAGCAGCATaGGCTAGCCCTGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: GCWPVCPPGAGSCRPPNVLTRAA*ASPGDA
Trigger: AGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAG...CACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGGGCAGAGCGTGCGGTaGCAAGGGTCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: RPRSHSKGPGNTDCQKTRGQSVR*QGSDWR
Trigger: CCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCC...CCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCAAAGCCGTCGGCGTTCTaGGTCCTGCGAATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: CSAGLDTADPQGVQASQPKPSAF*VLRMSR
Trigger: TCGGGACATTCGCAGGACGCAGAACGCCGACGGCTT...TGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCCGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: VRTAAFPCVPGRESPSPPEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...GGGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 4 (lower is better)
Translates to: ASTLSDGRWHLPRPQGLERSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 4 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QPGWTQRIHKAFRPRSHSPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...GGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HPSFKVRGCWPVCPPGAGEWRAD*MCTASA
Trigger: GGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTC...ACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CAGGAAGGACCGCCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCCCATCGGCCAGGACCTaGACGGCAGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QEGPPGGNLDFFILAICSPSART*TAGAAP
Trigger: GGGGGCTGCCCCTGCCGTGCAGGTCCTGGCCGATGG...GCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp AACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATGGTGTGGTGGGGGCAGAGCGTaGGGTGACAAGGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: NSEAWGPAAVSARLLTWCGGGRA*GDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACC...ACACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGGGTGGGGGCAGAGCGTaGGGTGACAAGGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRGGGRA*GDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACC...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: PSRVSGQGVTGSRAPLTGVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...GCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCACTGCCAGAAGTGGTaGGGGTCGAAGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AAPPPAEGKTMPVGAARKHCQKW*GSKSRK
Trigger: CTTCCTGGACTTCGACCCCCACCACTTCTGGCAGTG...CTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CCA 90 bp CAGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGGGGCCTTGGTGCCAGTaGGGTGCACGGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: QLQHQQHGQDHDGALPQQGPWCQ*GARRGA
Trigger: CGCCCCACGCCGTGCACCCCACTGGCACCAAGGCCC...CTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PCVHLEQVPAGRPMCTLGGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...GCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GCGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: AAPPPAEGKTMPVGAARKSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...CTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGCCAGCACACGGGGGTaGGCAGTGGACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: STWSRFLQAAQCVPWAQTASTRG*AVDRTG
Trigger: TCCTGTCCTGTCCACTGCCCACCCCCGTGTGCTGGC...CGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGCAGAACTCTGAGGCCTaGGGGCCGGCTGCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: STWSRFLQAAQCVPWAQTQNSEA*GPAAVS
Trigger: ACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTG...CGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCTGGAACATCTTCCCATaGCCACGGCCCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: ARSTLAVPAEHKQRPSPTWNIFP*PRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCA...GGTGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGACACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QEQHELALAMLSRAGHSGHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACACACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QHELALAMLSRAGHSGSTHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTCCACTGCCAGAAGTaGTGGGGGTCGAAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: PSRVSGQGVTGSRAPLTGLHCQK*WGSKSV
Trigger: TACAGACTTCGACCCCCACCACTTCTGGCAGTGGAG...GCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357575.8
3UTR CAA 72 bp GCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AAVKERRLALSS*ATRTSVHSFSI
Trigger: GATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR TCA 90 bp TCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SRLLARVSTWSRFLQAAQAWGQP*LLHPCY
Trigger: ATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGC...TTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR TCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCCCTGACAAGAGCAGCATaGGCTAGCCCTGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: VRTAAFPCVPGRESPSPPLTRAA*ASPGDA
Trigger: AGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAG...GGGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp TCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SRLLARVSTWSRFLQAAQRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...TTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AATGGACAGGTAGGTGATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: NGQVGDVARHAREGQDALGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...CAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCACCTACCTGTCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR TCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGACTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: QEQHELALAMLSRAGHSGLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGTCCGCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GPGNTDCQKTRSTVTLRPLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...CGGACGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCACTGCAGCCAGAAGTaGGGGAGCCAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVHCSQK*GSQHTG
Trigger: CCCCGTGTGCTGGCTCCCTCACTTCTGGCTGCAGTG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCTCAGTGCAAGGCTGCTaGCATGGTGTGACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRSVQGC*HGVTSC
Trigger: GCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGA...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCCAGGGCAGCAGGGTAAGGCGCCATCGGCCAGGACCTGCACGGCAGGGGCAGGGCGACAGTTTAATGTaGGGCAATTACCGCTACAGA +
Preference number: 4 (lower is better)
Translates to: AQGSRVRRHRPGPARQGQGDSLM*GNYRYR
Trigger: TCTGTAGCGGTAATTGCCTCACATTAAACTGTCGCC...CTGCCCCTGCCGTGCAGGTCCTGGCCGATGGCGCCTTACCCTGCTGCCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp ACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TPASRFAAAGPCVHLEQVEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...AACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GGGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCCGTAGTCCGAGAAGCTaGTCCACTGCCAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: GARSTLAVPAEHKQRPSPRSPRS*STARSG
Trigger: ACCACTTCTGGCAGTGGAGCAGCTTCTCGGACTACG...GGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp TCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAGACCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: STCGREDDACWSRTEASRPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...TCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAATTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PEVQSAPRRKGISASRAQFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...TTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ARSTLAVPAEHKQRPSPTPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...GGTGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GCGGTCAGTGCAAGGCTGCTGACATGGTGTGACCTCTTGCAACGGGGTGGGGGCGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AVSARLLTWCDLLQRGGGEWRAD*MCTASA
Trigger: GGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTC...GCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: GLTGSPAVTPASRFAAAGSPRVA*RLHVHS
Trigger: GCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCT...GCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCTCAGCCCGGCCCCCAACTGCATCCGGAGGTaGAGTCTGCACCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QSPRVACRLHVHSLSPAPNCIRR*SLHPEG
Trigger: TCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTT...GGGGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCCATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PCVHLEQVPAGRPMCTLGHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...GCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCGGTCAGTGCAAGGCTGCTGACATGGTGTGACCTCTTGCAACGGGGTGGGGGCCATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AVSARLLTWCDLLQRGGGHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...GCCCCCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAAGCGGCCCCTCCACCTaGGGAAGGGAAGACGATGCC +
Preference number: 4 (lower is better)
Translates to: CVHLEQVPAGRPMCTLGSSGPST*GREDDA
Trigger: GGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCT...TGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGAAGCGGCCCCTCCACCTaGGGAAGGGAAGACGATGCC +
Preference number: 4 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRSGPST*GREDDA
Trigger: GGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGCT...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCAGGCAGAGCTCAGATGCCTaGGGGAAGCGGCCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLATRTSVHSFSISSMVRQSSDA*GKRPLH
Trigger: GTGGAGGGGCCGCTTCCCGCAGGCATCTGAGCTCTG...CCTGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TGCGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: CVRTAAFPCVPGRESPSPRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...AGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp ACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: TPASRFAAAGPCVHLEQVRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...AACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp GCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCCGAGATTGTACCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: AVKERRLALSSLATRTSVPRLYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGTACAATCTCGG...CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474967.5
ENST00000589452.1
CDS-3UTR CCA 90 bp AAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: KQGVWPGCHGVEGSAHRPVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...AGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGGGGCCTTGGTGCCAGTaGGGTGCACGGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQGPWCQ*GARRGA
Trigger: CGCCCCACGCCGTGCACCCCACTGGCACCAAGGCCC...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCACCAGTGCCCGCGGCTaGCGGTCCCACATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPTSARG*RSHILV
Trigger: GACGAGGATGTGGGACCGCCAGCCGCGGGCACTGGT...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: EVQSAPRRKGISASRAQEKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...CTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 4 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: ARSTLAVPAEHKQRPSPTEDDAC*SRTEAS
Trigger: GGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTC...GGTGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: SCGHPSFKVRGCWPVCPPEDDAC*SRTEAS
Trigger: GGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTC...AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RPHSRLSVCTRQRKPQPSEEEAA*NIFPWP
Trigger: TGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTC...GGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCGGGAAATGAGATCTCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: AGNEISKFSQEKSADTGDIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...GTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGAGATCTCATTTCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR TCA 90 bp CCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTAGCCCGCCACGCCCGTaGAGGCCAGGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: PRPSLLEDGHQNCIRRCSSPPRP*RPGRTA
Trigger: TGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCT...ACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSTWSRFLQAAQCVPWATPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...AGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR TCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp TCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTTCAGTGCAAGGCTGCTaGCATGGTGTGACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SCGHPSFKVRGCWPVCPPSVQGC*HGVTSC
Trigger: GCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGA...AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AATGGACAGGTAGGTGATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGAAGCCGTCGGCGTTCTaGGTCCTGCGAATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: NGQVGDVARHAREGQDALKPSAF*VLRMSR
Trigger: TCGGGACATTCGCAGGACGCAGAACGCCGACGGCTT...CAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCACCTACCTGTCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR GCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCAGGTCCACCAGCACCTaGAGCAGGCCGCACACGGAG +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPRSTST*SRPHTE
Trigger: CTCCGTGTGCGGCCTGCTGCAGGTGCTGGTGGACCT...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCCTGGAGCAGGTTCCTaGAGGCCGCCCAATGTGTAC +
Preference number: 4 (lower is better)
Translates to: PGVELVGHTDLGAQLQHQPGAGS*RPPNVY
Trigger: GTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGG...CTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CGAGGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RGKLEEEAAWNIFPWPRPFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...GGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RVSTWSRFLQAAQCVPWAMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...AGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGATGGTCGCTGGCATCTaGCACGTCCCCAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: ASTLSDGRWHLPRPQGLEMVAGI*HVPKDS
Trigger: CGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCAT...CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLRADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGACCATCGGCCAGGACCTaGACGGCAGGGGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AAQCVPWAQTVFHKRKWGPSART*TAGAAP
Trigger: GGGGGCTGCCCCTGCCGTGCAGGTCCTGGCCGATGG...TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGGTGGGGGCAGAGCGTaGGGTGACAAGGGTCAGACT +
Preference number: 4 (lower is better)
Translates to: RPRSHSKGPGNTDCQKTRGGGRA*GDKGQT
Trigger: AGTCTGACCCTTGTCACCGCACGCTCTGCCCCCACC...CCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGCCGGCTGCGGTCAGTaGAAGGCTGCTGACATGGTG +
Preference number: 4 (lower is better)
Translates to: RPRSHSKGPGNTDCQKTRAGCGQ*KAADMV
Trigger: CACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGC...CCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GTCTTGAAGGCGTCACCACTGGTCCACATGAGCACCATCTTGATGCTCATGCCCGGCCTGGGGGCCGGCTaGGGTCAGTGCAAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLKASPLVHMSTILMLMPGLGAG*GQCKAA
Trigger: AGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCC...GGGCATGAGCATCAAGATGGTGCTCATGTGGACCAGTGGTGACGCCTTCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp GAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: EVQSAPRRKGISASRAQERKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...CTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGGGCACAGAGCTCAGATaGCTGCGGGAAGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLGTELR*LREAAP
Trigger: AGGGGCCGCTTCCCGCAGGCATCTGAGCTCTGTGCC...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR GCA 90 bp CCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: PGVELVGHTDLGAQLQHQRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...CTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR GCA 90 bp CTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCACCGAGATTGTACCACTaGACTCCAGCCTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LALAMLSRAGHSGSTRRSPRLYH*TPAWRQ
Trigger: CTGTCGCCAGGCTGGAGTGCAGTGGTACAATCTCGG...TGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474967.5
CDS-3UTR CCA 90 bp CCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCCAGGCACACGTAGGTaGAGAAGCCGTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: PGVELVGHTDLGAQLQHQPGTRR*RSRRRS
Trigger: AGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGG...CTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR CCA 90 bp CGCCACGCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGCTGCTCCAGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: RHAREGQDALHVVREAAPVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...TGGAGCAGCTTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR CCA 90 bp CGAGGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCTCCACTGCCAGAAGTaGTGGGGGTCGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGKLEEEAAWNIFPWPRPLHCQK*WGSKSR
Trigger: CCTGGACTTCGACCCCCACCACTTCTGGCAGTGGAG...GGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CCA 90 bp ATGAGCACCATCTTGATGCTCATGCCCTCCGTGGACTGGTGGCGGTGGTTGCGGGGGGCACACCCAGCATaGCTTCGGTCAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: MSTILMLMPSVDWWRWLRGAHPA*LRSAQP
Trigger: TGGCTGTGCTGACCGAAGCCATGCTGGGTGTGCCCC...CCGCAACCACCGCCACCAGTCCACGGAGGGCATGAGCATCAAGATGGTGCTCAT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CCA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCGGGCCTTGGTGCCAGTaGGGTGCACGGCGTGGGGCG +
Preference number: 4 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVGPWCQ*GARRGA
Trigger: CGCCCCACGCCGTGCACCCCACTGGCACCAAGGCCC...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCACTGTCAGAGGGCCTTaGTGCCAGTGGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVTVRGP*CQWGAR
Trigger: CCGTGCACCCCACTGGCACCAAGGCCCTCTGACAGT...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VKERRLALSSLATRTSVHLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...GTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTTACAGGGTTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CLARVSRGRGLRSQALQGLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...ACCCTGTAAGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACGCAAGGCTGCTGACATaGTGTGACCTCTTGCAACGG +
Preference number: 4 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHARLLT*CDLLQR
Trigger: CCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGC...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTTGGAACATCTTCCCATaGCCACGGCCCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: RVSTWSRFLQAAQCVPWAWNIFP*PRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCA...AGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGTGGAACATCTTCCCATaGCCACGGCCCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PGVELVGHTDLGAQLQHQWNIFP*PRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCA...CTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TGCGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: CVRTAAFPCVPGRESPSPEEEAA*NIFPWP
Trigger: TGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTC...AGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CGCCACGCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGCTGCTCCACAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RHAREGQDALHVVREAAPQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...TGGAGCAGCTTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR CAA 72 bp GATGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DAVKERRLALSS*ATRTSVHSFSI
Trigger: GATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474967.5
3UTR CAA 72 bp AGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: STVKERRLALSS*ATRTSVHSFSI
Trigger: GATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR TCA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCCAATGGACAGGTAGGTaGTGTAGCCCGCCACGCCCG +
Preference number: 4 (lower is better)
Translates to: SKLHPEVQSAPRRKGISAQWTGR*CSPPRP
Trigger: CGGGCGTGGCGGGCTACATCACCTACCTGTCCATTG...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCGGGCAGAGCGTGCGGTaGCAAGGGTCAGACTGGCGG +
Preference number: 4 (lower is better)
Translates to: DRLSWKMDIKTASGGAVCGQSVR*QGSDWR
Trigger: CCGCCAGTCTGACCCTTGTCACCGCACGCTCTGCCC...GCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp TCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAGAGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: STCGREDDACWSRTEASRAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...TCTGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCAGGCTGCTGACATGGTGTaGCCTCTTGCAACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LVGHTDLGAQLQHQQHGQAADMV*PLATGW
Trigger: CCACCCCGTTGCAAGAGGTCACACCATGTCAGCAGC...CTGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAATCAGTGCAAGGCTGCTaGCATGGTGTGACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PEVQSAPRRKGISASRAQSVQGC*HGVTSC
Trigger: GCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGA...TTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGCTGCTCCACTGCCAGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AREGQDALHVVREAAPLPGRRIT*TQESEA
Trigger: AGCCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...TGGCAGTGGAGCAGCTTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR GCA 90 bp CAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: QRPRKHRLSENPEHGDPAEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...CGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGAACTGGTGGCGGTGGTTaGGGTAAAGCTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRTGGGG*GKAGAH
Trigger: GTGTGCCCCAGCTTTACCGCAACCACCGCCACCAGT...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTACTGGTGGCGGTGGTTaGGGTAAAGCTGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSTGGGG*GKAGAH
Trigger: GTGTGCCCCAGCTTTACCGCAACCACCGCCACCAGT...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGSPRVA*RLHVHS
Trigger: GCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCT...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp CACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTCCCCACTCAGGAATTTaGTTCAGGCCAAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HPSFKVRGCWPVCPPGAGPHSGI*FRPKAQ
Trigger: CTGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGG...ACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGCCCCACTCAGGAATTTaGTTCAGGCCAAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRPHSGI*FRPKAQ
Trigger: CTGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGG...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGGCCGGCTGCGGTCAGTaGAAGGCTGCTGACATGGTG +
Preference number: 4 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLAGCGQ*KAADMV
Trigger: CACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGC...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TGCCTGTTGGAGCCGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTAGCAGTCACTGCGCCTaGAGTCGGCGACAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: CLLEPHGSIQNSEAWGPASSHCA*SRRQFN
Trigger: ATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCT...AGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCGGCTCCAACAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR CCA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTCCAGGCACACGTAGGTaGAGAAGCCGTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSPGTRR*RSRRRS
Trigger: AGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGG...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: DVARHAREGQDALHVVREVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...TTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR CCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGGCACACCCAGCATaGCTTCGGTCAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPGAHPA*LRSAQP
Trigger: TGGCTGTGCTGACCGAAGCCATGCTGGGTGTGCCCC...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp CCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PAVTPASRFAAAGPCVHLAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...CAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp ACTGCACGTAGTCCGAGAAGCTGCTCCACTGCCAGAAGTGGTGGGGGTCGAAGTAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: TARSPRSCSTARSGGGRSKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...ACTTCGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTCGGACTACGTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CCA 90 bp TGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: CVHLEQVPAGRPMCTLGSDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...TGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACAGCAAGGCTGCTGACATaGTGTGACCTCTTGCAACGG +
Preference number: 4 (lower is better)
Translates to: QHELALAMLSRAGHSGSTARLLT*CDLLQR
Trigger: CCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGC...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ASTLSDGRWHLPRPQGLEEEEAA*NIFPWP
Trigger: TGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTC...CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGACCGCCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: GPPGGNLDFFILAICSCKIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...TTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589452.1
CDS-3UTR TCA 90 bp TCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATGGTGACTCCGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SVRRSRRTRGTPGGHGDSAWGQP*LLHPCY
Trigger: ATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGC...GGAGTCACCATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR TCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCTGACAAGAGCAGCATaGGCTAGCCCTGGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVLTRAA*ASPGDA
Trigger: AGCATCGCCAGGGCTAGCTCATGCTGCTCTTGTCAG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPRRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: RPYRVSCGHPSFKVRGCWRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...CCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGCTGCTCCACTGCCAGTTCTTGACACCAGCTaGCTGGACTCCTTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AREGQDALHVVREAAPLPVLDTS*LDSFSP
Trigger: TGGAGAGAAGGAGTCCAGGCAGCTGGTGTCAAGAAC...TGGCAGTGGAGCAGCTTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp GCCTCCACGTTGTCTGATGGTCGCTGGCATCTGCCACGTCCCCAAGGACTCGAGCGTAGTCCGAGAAGCTaGTCCACTGCCAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ASTLSDGRWHLPRPQGLERSPRS*STARSG
Trigger: ACCACTTCTGGCAGTGGAGCAGCTTCTCGGACTACG...CTCGAGTCCTTGGGGACGTGGCAGATGCCAGCGACCATCAGACAACGTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp CACAGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCCCGCACACGGAGAACTaGAGAGGGGCACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: HSFSISSMVRIMMALCHSPHTEN*RGAPFS
Trigger: GCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGG...GCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPAVTPASRFAAAGPCVHDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...GTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPRKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp TCTCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: SLSSVRRSRRTRGTPGGHRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...ATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp CCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PQLQGSRLLARVSTWSRFAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...GAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GLTGSPAVTPASRFAAAGAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...GCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp AGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SFSISSMVRIMMALCHSSKVRGC*PVCPPG
Trigger: TCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTT...GCTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000474967.5
CDS-3UTR CCA 90 bp ATGAGCACCATCTTGATGCTCATGCCCTCCGTGGACTGGTGGCGGTGGTTGCGGGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: MSTILMLMPSVDWWRWLREDDAC*SRTEAS
Trigger: GGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTC...CCGCAACCACCGCCACCAGTCCACGGAGGGCATGAGCATCAAGATGGTGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CCA 90 bp CACAGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCCACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSFSISSMVRIMMALCHSHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...GCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCTGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
3UTR CAA 72 bp AAGGACCGCCTGGGGGCAACCTTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: KDRLGATLTSSS*LSAAVKERRLA
Trigger: CGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR TCA 90 bp AGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGCAATGGACAGGTAGGTaGTGTAGCCCGCCACGCCCG +
Preference number: 4 (lower is better)
Translates to: RWTSKLHPEVQSAPRRKGQWTGR*CSPPRP
Trigger: CGGGCGTGGCGGGCTACATCACCTACCTGTCCATTG...CCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp TCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGCCTGGCTGTCCCCGCTaGGCACAAACAGCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SWKMDIKTASGGAVCTQKPGCPR*AQTASQ
Trigger: CTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGG...CTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AATGGACAGGTAGGTGATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGAGGAGAACCAGAGGCTaGCAAGAGCAGCATGAGCTA +
Preference number: 4 (lower is better)
Translates to: NGQVGDVARHAREGQDALRRTRG*QEQHEL
Trigger: TAGCTCATGCTGCTCTTGTCAGCCTCTGGTTCTCCT...CAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCACCTACCTGTCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR TCA 90 bp TCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATGGACCTGGTGGGCATGGTaGCTCCTGATAAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: SKFSQEKSADTGDTWWAWTWWAW*LLIRKP
Trigger: GGGTTTCCTTATCAGGAGTCACCATGCCCACCAGGT...CCATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR GCA 90 bp AGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCAAGCCGTCGGCGTTCTaGGTCCTGCGAATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: SFSISSMVRIMMALCHSSKPSAF*VLRMSR
Trigger: TCGGGACATTCGCAGGACGCAGAACGCCGACGGCTT...GCTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR GCA 90 bp CCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGAGACACCTTCCAATCTaGCCGGACAGAGAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGVELVGHTDLGAQLQHQRHLPI*PDREAE
Trigger: TTCTGCCTCTCTGTCCGGGCAGATTGGAAGGTGTCT...CTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp TATTCAAAGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGAGAAGCTGCTCCACTaGCAGAAGTGGTGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: YSKHCKGAAPGVELVGHTEKLLH*QKWWGS
Trigger: CGACCCCCACCACTTCTGGCAGTGGAGCAGCTTCTC...CGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCTTTGAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR GCA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCGTAGTCCGAGAAGCTaGTCCACTGCCAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SSLATRTSVHSFSISSMVRSPRS*STARSG
Trigger: ACCACTTCTGGCAGTGGAGCAGCTTCTCGGACTACG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR GCA 90 bp AGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGCCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPPNVYLGLRRCFIRGNGPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...CCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp AGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGCGTGCAGACTGCATGTaGACAGCCTCAGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPPNVYLGLRRCFIRGNGRADCM*TASARP
Trigger: GGGCCGGGCTGAGGCTGTGCACATGCAGTCTGCACG...CCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GTCTTGAAGGCGTCACCACTGGTCCACATGAGCACCATCTTGATGCTCATGCCCGCCGGCTGCGGTCAGTaGAAGGCTGCTGACATGGTG +
Preference number: 4 (lower is better)
Translates to: VLKASPLVHMSTILMLMPAGCGQ*KAADMV
Trigger: CACCATGTCAGCAGCCTTGCACTGACCGCAGCCGGC...GGGCATGAGCATCAAGATGGTGCTCATGTGGACCAGTGGTGACGCCTTCAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CAGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCCAGGCACACGTAGGTaGAGAAGCCGTCGGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QLQHQQHGQDHDGALPQQPGTRR*RSRRRS
Trigger: AGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGG...CTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR CCA 90 bp CTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LAICSCKGAAPGVELVGHVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR CCA 90 bp AGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCCTCCACTGCCAGAAGTaGTGGGGGTCGAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFSISSMVRIMMALCHSSLHCQK*WGSKSR
Trigger: CCTGGACTTCGACCCCCACCACTTCTGGCAGTGGAG...GCTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CCA 90 bp GACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCTGCTCATGCCCTCCGTaGACTGGTGGCGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: DRLSWKMDIKTASGGAVCCSCPP*TGGGGC
Trigger: GCAACCACCGCCACCAGTCCACGGAGGGCATGAGCA...GCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGAGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QEQHELALAMLSRAGHSGAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp AGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGTCCAAGCAGGGTGTCTaGCCAGGGTGTCACGGGGTC +
Preference number: 4 (lower is better)
Translates to: RWTSKLHPEVQSAPRRKGSKQGV*PGCHGV
Trigger: GACCCCGTGACACCCTGGCCAGACACCCTGCTTGGA...CCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAAGCCAGCACACGGGGGTaGGCAGTGGACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQASTRG*AVDRTG
Trigger: TCCTGTCCTGTCCACTGCCCACCCCCGTGTGCTGGC...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp CAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGGCAAGGCTGCTGACATaGTGTGACCTCTTGCAACGG +
Preference number: 4 (lower is better)
Translates to: QRPRKHRLSENPEHGDPAARLLT*CDLLQR
Trigger: CCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGC...CGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp AGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGCAAGGCTGCTGACATaGTGTGACCTCTTGCAACGG +
Preference number: 4 (lower is better)
Translates to: RPRSHSKGPGNTDCQKTRARLLT*CDLLQR
Trigger: CCGTTGCAAGAGGTCACACCATGTCAGCAGCCTTGC...CCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGAGGAGGAGGCAGCGTaGAACATCTTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SGLAATPKAQETPTVRKPEEEAA*NIFPWP
Trigger: TGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTC...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGCAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRPRKHRLSENPEHGDPAQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...CGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474967.5
CDS-3UTR CCA 90 bp TCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCAGGCAAACCTGGGTATGGTaGCAGGCACCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SLATRTSVHSFSISSMVRQTWVW*QAPVVP
Trigger: TGGGACTACAGGTGCCTGCCACCATACCCAGGTTTG...CCTGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR TCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCACACCCCACAGAGGCTaGTGGAGACCCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVTPHRG*WRPQCP
Trigger: TGGGCATTGGGGTCTCCATCAGCCTCTGTGGGGTGT...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGAGGCCTCCACGTTGTCTaGTGGTCGCTGGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: AAQCVPWAQTVFHKRKWGGLHVV*WSLASA
Trigger: GGCAGATGCCAGCGACCATCAGACAACGTGGAGGCC...TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGGCGACAGTTTAATGTaGGGCAATTACCGCTACAGA +
Preference number: 4 (lower is better)
Translates to: PEVQSAPRRKGISASRAQGDSLM*GNYRYR
Trigger: TCTGTAGCGGTAATTGCCTCACATTAAACTGTCGCC...TTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp AGCGGGGACTCAAAGCGCCTTCCAAACCTGGGTATGGTGGCAGGCACCTGTAGTGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SGDSKRLPNLGMVAGTCSGRRIT*TQESEA
Trigger: AGCCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...ACTACAGGTGCCTGCCACCATACCCAGGTTTGGAAGGCGCTTTGAGTCCCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR GCA 90 bp AGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGCATCTCTGCCACACCTaGAGGGGCCACAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RPPNVYLGLRRCFIRGNGHLCHT*RGHSTH
Trigger: GTGGGTGCTGTGGCCCCTGCAGGTGTGGCAGAGATG...CCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp TTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCT +
Preference number: 4 (lower is better)
Translates to: FLQAAQCVPWAQTVFHKRFKVRG*WPVCPP
Trigger: AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA...CCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR GCA 90 bp CAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGAGCAGTCACTGCGCCTaGAGTCGGCGACAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: QASQPLQRPRKHRLSENPSSHCA*SRRQFN
Trigger: ATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCT...CGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp TTCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCG +
Preference number: 4 (lower is better)
Translates to: FILAICSCKGAAPGVELVRRSAS*ECPDTA
Trigger: CGCAGTATCGGGACATTCGCAGGACGCAGAACGCCG...AACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589452.1
CDS-3UTR CCA 90 bp TCTCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SLSSVRRSRRTRGTPGGHVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...ATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCTGCTCATGCCCTCCGTaGACTGGTGGCGGTGGTTGC +
Preference number: 4 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVCSCPP*TGGGGC
Trigger: GCAACCACCGCCACCAGTCCACGGAGGGCATGAGCA...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp AGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: RPPNVYLGLRRCFIRGNGGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...CCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGCCAGATCAACCCTaGCTGTCCCCGCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKGPDQP*LSPLST
Trigger: TGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 4 (lower is better)
Translates to: GISASRAQEWRADCMCTAVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...GGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCATACGTGATTACTCAGTaGCCAGAGTCAGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPYVITQ*PESEAE
Trigger: CTCTGCTTCTGACTCTGGTCACTGAGTAATCACGTA...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR TCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAAGGAAGTAGGCCGTCTTaGAGGCGTCACCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQGSRPS*RRHHWS
Trigger: GGACCAGTGGTGACGCCTTCAAGACGGCCTACTTCC...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGACTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AAQCVPWAQTVFHKRKWGLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCCTCAGCCATTGCCCATaGGGGCCTCCACGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVLSHCP*GPPRCL
Trigger: CAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAG...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCACCCATGCCCCATCTCTaGCACACCTGCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAPMPHL*HTCRGH
Trigger: GTGGCCCCTGCAGGTGTGGCAGAGATGGGGCATGGG...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp CCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PRPSLLEDGHQNCIRRCSPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...ACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp AGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGAGTGGCGTGCAGACTaGATGTGCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: RPPNVYLGLRRCFIRGNGEWRAD*MCTASA
Trigger: GGCTGAGGCTGTGCACATGCAGTCTGCACGCCACTC...CCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GTCTTGAAGGCGTCACCACTGGTCCACATGAGCACCATCTTGATGCTCATGCCCAGCCCAAGAGTGGCGTaGAGACTGCATGTGCACAGC +
Preference number: 4 (lower is better)
Translates to: VLKASPLVHMSTILMLMPSPRVA*RLHVHS
Trigger: GCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCT...GGGCATGAGCATCAAGATGGTGCTCATGTGGACCAGTGGTGACGCCTTCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR GCA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCCCCCACTCAGGAATTTaGTTCAGGCCAAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SKLHPEVQSAPRRKGISAPHSGI*FRPKAQ
Trigger: CTGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGG...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR GCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAACATGGTGTGACCTCTTaGAACGGGGTGGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQHGVTS*NGVGAE
Trigger: CTCTGCCCCCACCCCGTTGCAAGAGGTCACACCATG...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp CAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGCCCAATGTGTACCTTaGGCTCAGACGGTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: QASQPLQRPRKHRLSENPAQCVP*AQTVFH
Trigger: ATGAAACACCGTCTGAGCCCAAGGTACACATTGGGC...CGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CCGCCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAGGAGATGCTCAGCCGGGCTaGACACAGCGGATCCACAAG +
Preference number: 4 (lower is better)
Translates to: PPGGNLDFFILAICSCKGDAQPG*TQRIHK
Trigger: CTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATC...TCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CCA 90 bp GCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGATGGAACATCTTCCCATaGCCACGGCCCCGGCACAGA +
Preference number: 4 (lower is better)
Translates to: AAQCVPWAQTVFHKRKWGWNIFP*PRPRHR
Trigger: TCTGTGCCGGGGCCGTGGCCATGGGAAGATGTTCCA...TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAAGCCCGCCACGCCCGTaGAGGCCAGGACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSASPPRP*RPGRTA
Trigger: TGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCT...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCACAATGGACAGGTAGGTaGTGTAGCCCGCCACGCCCG +
Preference number: 4 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAQWTGR*CSPPRP
Trigger: CGGGCGTGGCGGGCTACATCACCTACCTGTCCATTG...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGAAACCCGGAGCACGGTaGCCCTGCGTCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GSTNGLLIPSRHTGYIQQKPGAR*PCVRTA
Trigger: GGCTGTGCGGACGCAGGGTCACCGTGCTCCGGGTTT...CTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp CGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTCAGTGCAAGGCTGCTaGCATGGTGTGACCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RDRLSWKMDIKTASGGAVSVQGC*HGVTSC
Trigger: GCAAGAGGTCACACCATGTCAGCAGCCTTGCACTGA...GACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR TCA 90 bp GAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGCCACAAATGGTTTATTaGTTCCAAGTCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: EVQSAPRRKGISASRAQEPQMVY*FQVATQ
Trigger: CTGTGTGGCGACTTGGAATCAATAAACCATTTGTGG...CTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCGGCAGGAGAATCACTTaGACCCAGGAGTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DRLSWKMDIKTASGGAVCGRRIT*TQESEA
Trigger: AGCCTCTGACTCCTGGGTTCAAGTGATTCTCCTGCC...GCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474967.5
CDS-3UTR GCA 90 bp ATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAGTCCCTTACAGGGTCTCCTaGGGTCACCCCAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: IDSKSPHRVHSAVTAPAVPYRVS*GHPSFK
Trigger: CTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGG...GACTGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGGATGGACATCAAAACTaGATCCGGAGGTGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLDGHQN*IRRCSL
Trigger: CAGACTGCACCTCCGGATGCAGTTTTGATGTCCATC...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GGTACATTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAACACTGCCAGAAGTGGTaGGGGTCGAAGTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTFSSHCACSRRQFNVRQHCQKW*GSKSRK
Trigger: CTTCCTGGACTTCGACCCCCACCACTTCTGGCAGTG...TTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAATGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CCA 90 bp ACTCCCTGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCTTGTCTGATGGTCGCTaGCATCTGCCACGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TPWTRDRLSWKMDIKTASLSDGR*HLPRPQ
Trigger: TTGGGGACGTGGCAGATGCCAGCGACCATCAGACAA...GGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCAGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 4 (lower is better)
Translates to: ASQPLQRPRKHRLSENPEVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...CTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp GCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCATCTCATCAGAAACAATaGAGTCCAGAGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ARWPHGPRCTASASAAWSSHQKQ*SPEGSG
Trigger: TCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGA...TGACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
3UTR CAA 72 bp GGGTCGAAGTCCAGGAAGGACCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GSKSRKDRLGAT*TSSSLLSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGACTTCGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR TCA 90 bp GGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGCACTGCAGCCAGAAGTaGGGGAGCCAGCACACGGGG +
Preference number: 4 (lower is better)
Translates to: GSTNGLLIPSRHTGYIQQHCSQK*GSQHTG
Trigger: CCCCGTGTGCTGGCTCCCTCACTTCTGGCTGCAGTG...CTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACCACAAATGGTTTATTaGTTCCAAGTCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRPQMVY*FQVATQ
Trigger: CTGTGTGGCGACTTGGAATCAATAAACCATTTGTGG...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTAGCAGTCACTGCGCCTaGAGTCGGCGACAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGSSHCA*SRRQFN
Trigger: ATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCT...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp CACCTGGTGGGCATGGTGACTCCTGATAAGGAAACCCCAATAAGATTAACAGCTCAGGACACCAGCTGGTaGAGTGGCACCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLVGMVTPDKETPIRLTAQDTSW*SGTRSQ
Trigger: CTGGCTCCTGGTGCCACTGCACCAGCTGGTGTCCTG...AGCTGTTAATCTTATTGGGGTTTCCTTATCAGGAGTCACCATGCCCACCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp GCCGCCCAATGTGTACCTTGGGCTCAGACGGTGTTTCATAAGAGGAAATGGGGAGTATCCGCAAAATGTTaGCCACCAGCAGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AAQCVPWAQTVFHKRKWGVSAKC*PPAAPG
Trigger: GCCTGGTGCTGCTGGTGGCCAACATTTTGCGGATAC...TCCCCATTTCCTCTTATGAAACACCGTCTGAGCCCAAGGTACACATTGGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CCA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCGTCTCTCCTGGAAGATaGACATCAAAACTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SKLHPEVQSAPRRKGISAVSPGR*TSKLHP
Trigger: CGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGAC...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CCA 90 bp CATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATAACATATTCAAAGCACTGTATCGCAGCGCCCGCCTaGCCGAGGCTGTCACGGGCT +
Preference number: 4 (lower is better)
Translates to: HQKQWSPEGSGITYSKHCIAAPA*PRLSRA
Trigger: AGCCCGTGACAGCCTCGGCCAGGCGGGCGCTGCGAT...ACAGTGCTTTGAATATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR CCA 90 bp CCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCACTGCCAGAAGTGGTaGGGGTCGAAGTCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: PSLLEDGHQNCIRRCSLHHCQKW*GSKSVK
Trigger: CTTTACAGACTTCGACCCCCACCACTTCTGGCAGTG...GTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357575.8
CDS-3UTR CCA 90 bp AAGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACACGGACCTCGAGTCCAGAGGGCAGTaGAATAACATATTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: KHCKGAAPGVELVGHTDLESRGQ*NNIFKA
Trigger: TGCTTTGAATATGTTATTCCACTGCCCTCTGGACTC...GAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR TCA 90 bp CCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: PGGNLDFFILAICSCKGAAWGQP*LLHPCY
Trigger: ATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGC...CGCTCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR CCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGCCAGCACACGGGGGTaGGCAGTGGACAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSAASTRG*AVDRTG
Trigger: TCCTGTCCTGTCCACTGCCCACCCCCGTGTGCTGGC...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp ACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATAACATACAATGGACAGGTAGGTaGTGTAGCCCGCCACGCCCG +
Preference number: 4 (lower is better)
Translates to: TADFSSETMESRGQWNNIQWTGR*CSPPRP
Trigger: CGGGCGTGGCGGGCTACATCACCTACCTGTCCATTG...TATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR GCA 90 bp GGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGAAGCCGTCGGCGTTCTaGGTCCTGCGAATGTCCCGA +
Preference number: 4 (lower is better)
Translates to: GSTNGLLIPSRHTGYIQQKPSAF*VLRMSR
Trigger: TCGGGACATTCGCAGGACGCAGAACGCCGACGGCTT...CTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp GGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGCGGAAGGGAAGACGATaGCTGTTGGAGCCGCACGGA +
Preference number: 4 (lower is better)
Translates to: GSTNGLLIPSRHTGYIQQRKGRR*LLEPHG
Trigger: TCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCG...CTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGGGGCACACCCAGCATaGCTTCGGTCAGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSAGAHPA*LRSAQP
Trigger: TGGCTGTGCTGACCGAAGCCATGCTGGGTGTGCCCC...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp ACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATAACATACACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TADFSSETMESRGQWNNIHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...TATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591964.5
ENST00000593030.6
CDS-3UTR CCA 90 bp AGATTAACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATCACCAGCTGGTGCAGTaGCACCAGGAGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RLTADFSSETMESRGQWNHQLVQ*HQEPVQ
Trigger: CTGGACTGGCTCCTGGTGCCACTGCACCAGCTGGTG...ATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGTTAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591964.5
ENST00000593030.6
CDS-3UTR CCA 90 bp AGATCTCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGGAGTCCAGAGGGCAGTaGAATAACATATTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSLSSVRRSRRTRGTPGGESRGQ*NNIFKA
Trigger: TGCTTTGAATATGTTATTCCACTGCCCTCTGGACTC...CCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGAGATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp GTGGGCATGGTGACTCCTGATAAGGAAACCCCAATAAGATTAACAGCTGACTTCGAGGCTGACCTGGGGTaGCTCAGACAGCGGGAAATG +
Preference number: 4 (lower is better)
Translates to: VGMVTPDKETPIRLTADFEADLG*LRQREM
Trigger: CATTTCCCGCTGTCTGAGCCACCCCAGGTCAGCCTC...GAAGTCAGCTGTTAATCTTATTGGGGTTTCCTTATCAGGAGTCACCATGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp GGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGAGCAGAGCCCAAGAGTaGCGTGCAGACTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GSTNGLLIPSRHTGYIQQSRAQE*RADCMC
Trigger: GCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCT...CTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR TCA 90 bp GGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGCCACAAATGGTTTATTaGTTCCAAGTCGCCACACAG +
Preference number: 4 (lower is better)
Translates to: GRWTSKLHPEVQSAPRRKPQMVY*FQVATQ
Trigger: CTGTGTGGCGACTTGGAATCAATAAACCATTTGTGG...CTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGAAGACGATGCCTGTTaGAGCCGCACGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSAEDDAC*SRTEAS
Trigger: GGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTC...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR GCA 90 bp AGGATCCACAAATGGTTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCACGTAGTCCGAGAAGCTaGTCCACTGCCAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RIHKWFIDSKSPHRVHSARSPRS*STARSG
Trigger: ACCACTTCTGGCAGTGGAGCAGCTTCTCGGACTACG...TGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAACCATTTGTGGATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CCA 90 bp GTGACTCCTGATAAGGAAACCCCAATAAGATTAACAGCTGACTTCTCATCAGAACATGTGCTGGGGAATTaGAGCAGGTGGCGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: VTPDKETPIRLTADFSSEHVLGN*SRWRGG
Trigger: TCCTCCCCGCCACCTGCTCCAATTCCCCAGCACATG...TTCTGATGAGAAGTCAGCTGTTAATCTTATTGGGGTTTCCTTATCAGGAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CCA 90 bp ACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATAACATATCTCATCAGAAACAATaGAGTCCAGAGGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TADFSSETMESRGQWNNISHQKQ*SPEGSG
Trigger: TCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGA...TATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591964.5
ENST00000593030.6
CDS-3UTR CAA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSRPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACATCCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SPRGGQGPPVPAAGGPTSLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...GGATGTGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp CGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: RLLARVSTWSRFLQAAQCERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...ACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp CACCCTCCCCGCGGGGAGGTCAGGGCCCACCAGTGCCCGCGGCTGGCGGTCCCACGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: HPPRGEVRAHQCPRLAVPRLGAT*TSSSLL
Trigger: TAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCG...TGGGACCGCCAGCCGCGGGCACTGGTGGGCCCTGACCTCCCCGCGGGGAGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CAA 90 bp GCCCGGCCCCCTCAGCCATTGCCCATGAGGGCCTCCACGTTGTCTGATGGTCGCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: ARPPQPLPMRASTLSDGRRPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...GCGACCATCAGACAACGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS GCA 90 bp CACCGAAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTaGTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: HRRVSCGHPSFKVRG*WPVCPPGAGSCRPP
Trigger: GGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTTCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS-3UTR CAA 90 bp TCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: SCGHPSFKVRGCWPVCPPERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...AGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp GTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCCCGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: VRTAAFPCVPGRESPSPPRPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...GGGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TGCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACGGCCCCCTCAGCCATaGCCCATGAGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: CSAGLDTADPQGVQASQPRPPQP*PMRAST
Trigger: CGTGGAGGCCCTCATGGGCAATGGCTGAGGGGGCCG...TGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS CCA 90 bp TCAGCCTCAGGACTCCATCCAAGCCCTCACAACGTGCCAGCTGTGTaGGTCGCCCGTCTTCTGCCCGGCCCTCCCGGCAGGGACAGAGGC +
Preference number: 5 (lower is better)
Translates to: SASGLHPSPHNVPAV*VARLLPGPPGRDRG
Trigger: GCCTCTGTCCCTGCCGGGAGGGCCGGGCAGAAGACGGGCGACCCACACAGCTGGCACGTTGTGAGGGCTTGGATGGAGTCCTGAGGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp GATGTAGCCCGCCACGCCCGTGAAGGCCAGGACGCACTGCACGTAGTCCGAGAAGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: DVARHAREGQDALHVVREERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...TTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000591964.5
CDS-3UTR CAA 90 bp CCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: PAVTPASRFAAAGPCVHLHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...CAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS GCA 90 bp CTCCATCTCCCTCAGCCTCAGGACTCCATCCAAGCCCTCACAACGTaGCAGCTGTGTGGGTCGCCCGTCTTCTGCCCGGCCCTCCCGGCA +
Preference number: 5 (lower is better)
Translates to: LHLPQPQDSIQALTT*QLCGSPVFCPALPA
Trigger: TGCCGGGAGGGCCGGGCAGAAGACGGGCGACCCACACAGCTGGCACGTTGTGAGGGCTTGGATGGAGTCCTGAGGCTGAGGGAGATGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS CCA 90 bp CCCTTCGGCACATTTGGCGCTCCCCAGAACCAGTGGCCCAGGCACTaGTACCCGGGTCTAGTGGCCCTGAGTCCCCTCCCACAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: PFGTFGAPQNQWPRH*YPGLVALSPLPQLS
Trigger: GCTGAGCTGTGGGAGGGGACTCAGGGCCACTAGACCCGGGTACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGTGCCGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS CCA 90 bp CGAAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTaGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAAT +
Preference number: 5 (lower is better)
Translates to: RRVSCGHPSFKVRGC*PVCPPGAGSCRPPN
Trigger: ATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS-3UTR CAA 90 bp CCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PQLQGSRLLARVSTWSRFLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...GAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp CGTCCGCACAGCCGCCTTTCCGTGTGTACCAGGCAGAGAAAGCCCCAGCCCTCCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: RPHSRLSVCTRQRKPQPSLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...GGAGGGCTGGGGCTTTCTCTGCCTGGTACACACGGAAAGGCGGCTGTGCGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: LTGLTGSPAVTPASRFAAERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...AGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS CCA 90 bp CCCGGCAGGGACAGAGGCCAAGCCTCCTGTGGCCCGATGGGGAGATaGGGTGCCTGTGACATCCCGTCCCCAGCCACACCTGAGGTTTAT +
Preference number: 5 (lower is better)
Translates to: PGRDRGQASCGPMGR*GACDIPSPATPEVY
Trigger: ATAAACCTCAGGTGTGGCTGGGGACGGGATGTCACAGGCACCCCATCTCCCCATCGGGCCACAGGAGGCTTGGCCTCTGTCCCTGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS CCA 90 bp AACCACACACTCCATCACTCCGAGCCGACCCGACGCTGCTGCTCCTaGTCCCCGTTCCTGACGAGGATGCACAGGGTCTCAGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: NHTLHHSEPTRRCCS*SPFLTRMHRVSAVP
Trigger: CGGGACCGCTGAGACCCTGTGCATCCTCGTCAGGAACGGGGACCAGGAGCAGCAGCGTCGGGTCGGCTCGGAGTGATGGAGTGTGTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp GGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCACATGAGCACCATCTaGATGCTCATGCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GSRLLARVSTWSRFLQAAHMSTI*MLMPSV
Trigger: CACGGAGGGCATGAGCATCAAGATGGTGCTCATGTG...GGCGGCCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp GGAAAACTCGAGGAGGAGGCAGCGTGGAACATCTTCCCATGGCCACGGCCCCGGCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: GKLEEEAAWNIFPWPRPRHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...CCGGGGCCGTGGCCATGGGAAGATGTTCCACGCTGCCTCCTCCTCGAGTTTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp GGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: GSPAVTPASRFAAAGPCVGRRCL*EPHGSI
Trigger: GATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCC...GACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS CCA 90 bp CCTGACTCAGAACCCTTCGGCACATTTGGCGCTCCCCAGAACCAGTaGCCCAGGCACTGGTACCCGGGTCTAGTGGCCCTGAGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PDSEPFGTFGAPQNQ*PRHWYPGLVALSPL
Trigger: GAGGGGACTCAGGGCCACTAGACCCGGGTACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGTGCCGAAGGGTTCTGAGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS-3UTR CAA 90 bp TCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: STWSRFLQAAQCVPWAQTLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...CGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp TCTCTAAGTTCAGTCAGGAGAAGTCGGCGGACACGGGGGACACCTGGTGGGCATGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: SLSSVRRSRRTRGTPGGHERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...ATGCCCACCAGGTGTCCCCCGTGTCCGCCGACTTCTCCTGACTGAACTTAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CAA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCCACATGAGCACCATCTaGATGCTCATGCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLHMSTI*MLMPSV
Trigger: CACGGAGGGCATGAGCATCAAGATGGTGCTCATGTG...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp CCCAGTCCAAGCAGGGTGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: PSPSRVSGQGVTGSRAPLRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...GAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACACCCTGCTTGGACTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp AGCTCGTTGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATGGTCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SSLATRTSVHSFSISSMVLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...GACCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR CAA 90 bp AGCTTCAGCATCAGCAGCATGGTCAGGATCATGATGGCGCTCTGCCACAGCAGCGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: SFSISSMVRIMMALCHSSERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...GCTGCTGTGGCAGAGCGCCATCATGATCCTGACCATGCTGCTGATGCTGAAGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000474967.5
ENST00000589452.1
ENST00000591964.5
CDS-3UTR CAA 90 bp CTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: LAICSCKGAAPGVELVGHHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CAA 90 bp TGTCTGGCCAGGGTGTCACGGGGTCGAGGGCTCCGCTCACAGGCCTTACAGGGTATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: CLARVSRGRGLRSQALQGMRAST*SDGRWH
Trigger: ATGCCAGCGACCATCAGACAACGTGGAGGCCCTCAT...ACCCTGTAAGGCCTGTGAGCGGAGCCCTCGACCCCGTGACACCCTGGCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp GCGGCCCCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: AAPPPAEGKTMPVGAARKPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...CTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGGGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CAAGAGCAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGAACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QEQHELALAMLSRAGHSGTWCDL*QRGGGR
Trigger: TCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGT...TCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTGCTCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp GGGATCTCCGCCAGCAGAGCCCAAGAGTGGCGTGCAGACTGCATGTGCACAGCCACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GISASRAQEWRADCMCTATWCDL*QRGGGR
Trigger: TCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGT...GGCTGTGCACATGCAGTCTGCACGCCACTCTTGGGCTCTGCTGGCGGAGATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGTTCCTGCAGGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: FKVRGCWPVCPPGAGSCRGRRCL*EPHGSI
Trigger: GATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCC...CCTGCAGGAACCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS TCA 90 bp GACGAGGATGCACAGGGTCTCAGCGGTCCCGCACTTGAAGCTGGCTaGCCTCGCTGCCTACTTCCTCCGCAGAGACTGCTCCATCTCCCT +
Preference number: 5 (lower is better)
Translates to: DEDAQGLSGPALEAG*PRCLLPPQRLLHLP
Trigger: AGGGAGATGGAGCAGTCTCTGCGGAGGAAGTAGGCAGCGAGGTCAGCCAGCTTCAAGTGCGGGACCGCTGAGACCCTGTGCATCCTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS GCA 90 bp AACTACAACCACACACTCCATCACTCCGAGCCGACCCGACGCTGCTaGTCCTGGTCCCCGTTCCTGACGAGGATGCACAGGGTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: NYNHTLHHSEPTRRC*SWSPFLTRMHRVSA
Trigger: CGCTGAGACCCTGTGCATCCTCGTCAGGAACGGGGACCAGGAGCAGCAGCGTCGGGTCGGCTCGGAGTGATGGAGTGTGTGGTTGTAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp TGGACCCGAGACCGTCTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: WTRDRLSWKMDIKTASGGERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...ACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAGACGGTCTCGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCCACTGTCAGAGGGCCTaGGTGCCAGTGGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: SGLAATPKAQETPTVRKPHCQRA*VPVGCT
Trigger: CGTGCACCCCACTGGCACCAAGGCCCTCTGACAGTG...GGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CGCACGGAAGCATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAACGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: RTEASRTLRPGGRLRSVQRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...TTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGATGCTTCCGTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TCACCCCAGCTTCAAGGTTCGCGGCTGCTGGCCCGTGTGTCCACCTGGAGCAGGCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: SPQLQGSRLLARVSTWSRRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...CCTGCTCCAGGTGGACACACGGGCCAGCAGCCGCGAACCTTGAAGCTGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp CAGCATGAGCTAGCCCTGGCGATGCTCAGCCGGGCTGGACACAGCGGATCCACAATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: QHELALAMLSRAGHSGSTMRAST*SDGRWH
Trigger: ATGCCAGCGACCATCAGACAACGTGGAGGCCCTCAT...TGTGGATCCGCTGTGTCCAGCCCGGCTGAGCATCGCCAGGGCTAGCTCATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp GGGCCAGATCAACCCTGGCTGTCCCCGCTGAGCACAAACAGCGTCCCAGCCCCACCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: GPDQPWLSPLSTNSVPAPPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...TGGGGCTGGGACGCTGTTTGTGCTCAGCGGGGACAGCCAGGGTTGATCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGGTACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HLEQVPAGRPMCTLGSDGTWCDL*QRGGGR
Trigger: TCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGT...ACCGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp GAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: EVQSAPRRKGISASRAQEGRRCL*EPHGSI
Trigger: GATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCC...CTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS GCA 90 bp CGTAACTACAACCACACACTCCATCACTCCGAGCCGACCCGACGCTaGTGCTCCTGGTCCCCGTTCCTGACGAGGATGCACAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: RNYNHTLHHSEPTRR*CSWSPFLTRMHRVS
Trigger: TGAGACCCTGTGCATCCTCGTCAGGAACGGGGACCAGGAGCAGCAGCGTCGGGTCGGCTCGGAGTGATGGAGTGTGTGGTTGTAGTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGGAGCGGCGCCTGGCGTaGAGCTCGTTGGCCACACGG +
Preference number: 5 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPERRLA*SSLATR
Trigger: CCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTC...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp GGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGCGTCCGCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: GPGNTDCQKTRSTVTLRPRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...CGGACGCAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CCTCCACCTGCGGAAGGGAAGACGATGCCTGTTGGAGCCGCACGGAAGCATCCAATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PPPAEGKTMPVGAARKHPMRAST*SDGRWH
Trigger: ATGCCAGCGACCATCAGACAACGTGGAGGCCCTCAT...TGGATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCCCTTCCGCAGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGGAAGACGATGCCTGTaGGAGCCGCACGGAAGCATC +
Preference number: 5 (lower is better)
Translates to: QASQPLQRPRKHRLSENPGRRCL*EPHGSI
Trigger: GATGCTTCCGTGCGGCTCCAACAGGCATCGTCTTCC...CGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS GCA 90 bp GGGATCCCTGAGACACGTTCCAAGTTCCGCAGCCAAGGAGAAGTATaGAGGCAAAGGACCATGACCCCGGCTCCCATCTCGCCCACACAG +
Preference number: 5 (lower is better)
Translates to: GIPETRSKFRSQGEV*RQRTMTPAPISPTQ
Trigger: CTGTGTGGGCGAGATGGGAGCCGGGGTCATGGTCCTTTGCCTGCATACTTCTCCTTGGCTGCGGAACTTGGAACGTGTCTCAGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp TCCGCTCACAGGCCTTACAGGGTCTCCTGCGGTCACCCCAGCTTCAAGGTTCGCAGTATCCGCAAAATGTaGGCCACCAGCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SAHRPYRVSCGHPSFKVRSIRKM*ATSSTR
Trigger: CCTGGTGCTGCTGGTGGCCAACATTTTGCGGATACT...GCGAACCTTGAAGCTGGGGTGACCGCAGGAGACCCTGTAAGGCCTGTGAGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS-3UTR CAA 90 bp ACATATTCAAAGCACTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: TYSKHCKGAAPGVELVGHLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGTGCTTTGAATATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591964.5
CDS-3UTR CAA 90 bp TCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCAGACGCGCCCAATGTGTACCTaGGGCTCAGACGGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: STWSRFLQAAQCVPWAQTRPMCT*GSDGVS
Trigger: TGAAACACCGTCTGAGCCCAAGGTACACATTGGGCG...CGTCTGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000590381.5
CDS TCA 90 bp AGGCTGGGCTGTGTGTGGCACGCACTCATAGAAAGCCCCAACCCCTaGCTGTTCCAGCGCGGGAATCTCAATCAGCCTGCAGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLGCVWHALIESPNP*LFQRGNLNQPAVWQ
Trigger: CTGCCAAACTGCAGGCTGATTGAGATTCCCGCGCTGGAACAGTCAGGGGTTGGGGCTTTCTATGAGTGCGTGCCACACACAGCCCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494607.5
CDS-3UTR CAA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTAGTATCCGCAAAATGTaGGCCACCAGCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSSIRKM*ATSSTR
Trigger: CCTGGTGCTGCTGGTGGCCAACATTTTGCGGATACT...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp CCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAGGAGCGCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PGGNLDFFILAICSCKGALALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...CGCTCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR CAA 90 bp GGGTGGCTCAGACAGCGGGAAATGAGATCTCTAAGTTCAGTCAGGAGAAGTCGGCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GWLRQREMRSLSSVRRSRLALSS*ATRTSV
Trigger: CACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAG...CCGACTTCTCCTGACTGAACTTAGAGATCTCATTTCCCGCTGTCTGAGCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS-3UTR CAA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTCACATGAGCACCATCTaGATGCTCATGCCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSHMSTI*MLMPSV
Trigger: CACGGAGGGCATGAGCATCAAGATGGTGCTCATGTG...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp TGTGTCCACCTGGAGCAGGTTCCTGCAGGCCGCCCAATGTGTACCTTGGGCTCACCCCCACTCAGGAATTaGCTTCAGGCCAAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: CVHLEQVPAGRPMCTLGSPPLRN*LQAKSP
Trigger: TGGGCTTTTGGCCTGAAGCAAATTCCTGAGTGGGGG...TGAGCCCAAGGTACACATTGGGCGGCCTGCAGGAACCTGCTCCAGGTGGACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp TCATCCTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGACATGGTGTGACCTCTaGCAACGGGGTGGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SSLLSAAVKERRLALSSLTWCDL*QRGGGR
Trigger: TCTGCCCCCACCCCGTTGCAAGAGGTCACACCATGT...CAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS-3UTR CAA 90 bp TCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGTATCCGCAAAATGTaGGCCACCAGCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SKLHPEVQSAPRRKGISASIRKM*ATSSTR
Trigger: CCTGGTGCTGCTGGTGGCCAACATTTTGCGGATACT...GGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
CDS-3UTR CAA 90 bp GCTCAGCCGGGCTGGACACAGCGGATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCACAAATGGTTTATaGATTCCAAGTCGCCACACA +
Preference number: 5 (lower is better)
Translates to: AQPGWTQRIHKAFRPRSHSTNGL*IPSRHT
Trigger: TGTGTGGCGACTTGGAATCAATAAACCATTTGTGGA...GTGGCTGCGAGGCCTGAACGCCTTGTGGATCCGCTGTGTCCAGCCCGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS TCA 90 bp GTTCCAAGTTCCGCAGCCAAGGAGAAGTATGCAGGCAAAGGACCATaGCCCCGGCTCCCATCTCGCCCACACAGCACCCCCAATACTATT +
Preference number: 5 (lower is better)
Translates to: VPSSAAKEKYAGKGP*PRLPSRPHSTPNTI
Trigger: AATAGTATTGGGGGTGCTGTGTGGGCGAGATGGGAGCCGGGGTCATGGTCCTTTGCCTGCATACTTCTCCTTGGCTGCGGAACTTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp CTCTCCTGGAAGATGGACATCAAAACTGCATCCGGAGGTGCAGTCTGCACCCAGCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: LSWKMDIKTASGGAVCTQRLGAT*TSSSLL
Trigger: TAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCG...CTGGGTGCAGACTGCACCTCCGGATGCAGTTTTGATGTCCATCTTCCAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CAA 90 bp ATCCAGAACTCTGAGGCCTGGGGGCCGGCTGCGGTCAGTGCAAGGCTGCTGACATCCACAAATGGTTTATaGATTCCAAGTCGCCACACA +
Preference number: 5 (lower is better)
Translates to: IQNSEAWGPAAVSARLLTSTNGL*IPSRHT
Trigger: TGTGTGGCGACTTGGAATCAATAAACCATTTGTGGA...TGTCAGCAGCCTTGCACTGACCGCAGCCGGCCCCCAGGCCTCAGAGTTCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS TCA 90 bp CGCCAGGCATCCACCATCCCACTCCCTTCTTATCCAACGGTCCTCTaGGACAAGCCTGAACCTGCACCTGCTGGTAAAATGAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: RQASTIPLPSYPTVL*DKPEPAPAGKMNAG
Trigger: ACCTGCATTCATTTTACCAGCAGGTGCAGGTTCAGGCTTGTCTCAGAGGACCGTTGGATAAGAAGGGAGTGGGATGGTGGATGCCTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469369.5
CDS-3UTR CAA 90 bp TTCAGCAGTCACTGCGCCTGCAGTCGGCGACAGTTTAATGTGAGGCAATTACCGAGTATCCGCAAAATGTaGGCCACCAGCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: FSSHCACSRRQFNVRQLPSIRKM*ATSSTR
Trigger: CCTGGTGCTGCTGGTGGCCAACATTTTGCGGATACT...CGGTAATTGCCTCACATTAAACTGTCGCCGACTGCAGGCGCAGTGACTGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp CCGCCTGGGGGCAACCTTGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAGGAAGTATCCGCAAAATGTaGGCCACCAGCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PPGGNLDFFILAICSCKGSIRKM*ATSSTR
Trigger: CCTGGTGCTGCTGGTGGCCAACATTTTGCGGATACT...TCCTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR CAA 90 bp GATCCACAAGGCGTTCAGGCCTCGCAGCCACTCCAAAGGCCCAGGAAACACCGATTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: DPQGVQASQPLQRPRKHRLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...TCGGTGTTTCCTGGGCCTTTGGAGTGGCTGCGAGGCCTGAACGCCTTGTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS-3UTR CAA 90 bp CTTGCTATCTGCAGCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTTGGCCACTTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: LAICSCKGAAPGVELVGHLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...GTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGCTGCAGATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000589452.1
CDS-3UTR CAA 90 bp TTTATTGATTCCAAGTCGCCACACAGGGTACATTCAGCAGTCACTGCGCCTGCAATGAGGGCCTCCACGTaGTCTGATGGTCGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FIDSKSPHRVHSAVTAPAMRAST*SDGRWH
Trigger: ATGCCAGCGACCATCAGACAACGTGGAGGCCCTCAT...TGCAGGCGCAGTGACTGCTGAATGTACCCTGTGTGGCGACTTGGAATCAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS-3UTR CAA 90 bp AGGTGCAGTCTGCACCCAGAAGGAAGGGGATCTCCGCCAGCAGAGCCCAAGAGTTCCACAAATGGTTTATaGATTCCAAGTCGCCACACA +
Preference number: 5 (lower is better)
Translates to: RCSLHPEGRGSPPAEPKSSTNGL*IPSRHT
Trigger: TGTGTGGCGACTTGGAATCAATAAACCATTTGTGGA...ACTCTTGGGCTCTGCTGGCGGAGATCCCCTTCCTTCTGGGTGCAGACTGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351365.7
ENST00000357575.8
ENST00000397778.7
CDS TCA 90 bp AATAACATATTCAAAGCACCAGGAAGGACCGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTATCTGCAGCTGAGGCTCCTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: NNIFKAPGRTAWGQP*LLHPCYLQLRLLAW
Trigger: CCAGGCAAGGAGCCTCAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGTGCTTTGAATATGTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS CCA 90 bp AGGTTTATAAAAGCAGAAGTTAGCCCAGGTGATCTCACAGGGGCTTaGCACTCACCCAGGGAGCAGGGCAAACTCAGAGGTAGAACACCT +
Preference number: 5 (lower is better)
Translates to: RFIKAEVSPGDLTGA*HSPREQGKLRGRTP
Trigger: AGGTGTTCTACCTCTGAGTTTGCCCTGCTCCCTGGGTGAGTGCCAAGCCCCTGTGAGATCACCTGGGCTAACTTCTGCTTTTATAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS-3UTR CAA 90 bp TCCAAAGGCCCAGGAAACACCGACTGTCAGAAAACCCGGAGCACGGTGACCCTGTTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: SKGPGNTDCQKTRSTVTLLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...CAGGGTCACCGTGCTCCGGGTTTTCTGACAGTCGGTGTTTCCTGGGCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351365.7
ENST00000397778.7
CDS TCA 90 bp AAGCGCCTTCCAAACAGGCAAAGAAGCAGGTACGTGATTACTCAGTaGCCAGAGTCAGAAGCAGAGTTCTTGACACCAGCTGCCTGGACT +
Preference number: 5 (lower is better)
Translates to: KRLPNRQRSRYVITQ*PESEAEFLTPAAWT
Trigger: AGTCCAGGCAGCTGGTGTCAAGAACTCTGCTTCTGACTCTGGTCACTGAGTAATCACGTACCTGCTTCTTTGCCTGTTTGGAAGGCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS TCA 90 bp CATCCTTGCTATCTGCAGCTGAGGCTCCTTGCCTGGAAAGCAGTGTaGTCAGATCCACGTTTGTGTAGGATGGAATGCAGAGTTCTGATG +
Preference number: 5 (lower is better)
Translates to: HPCYLQLRLLAWKAV*SDPRLCRMECRVLM
Trigger: CATCAGAACTCTGCATTCCATCCTACACAAACGTGGATCTGATCACACTGCTTTCCAGGCAAGGAGCCTCAGCTGCAGATAGCAAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS CCA 90 bp TTAACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTaGAATAACATATTCAAAGCACCAGGAAGGACCGCCTGGGGGCAA +
Preference number: 5 (lower is better)
Translates to: LTADFSSETMESRGQ*NNIFKAPGRTAWGQ
Trigger: TTGCCCCCAGGCGGTCCTTCCTGGTGCTTTGAATATGTTATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000466449.5
ENST00000589000.5
ENST00000593030.6
CDS CCA 90 bp AGCGGGGACTCAAAGCGCCTTCCAAACCTGCCAAATCCTGAATGTTaGCATTCCACAGAGTGTGATCTGCTGAATGCTGGTTTTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SGDSKRLPNLPNPEC*HSTECDLLNAGFAK
Trigger: TTTTGCAAAACCAGCATTCAGCAGATCACACTCTGTGGAATGCCAACATTCAGGATTTGGCAGGTTTGGAAGGCGCTTTGAGTCCCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478144.5
CDS-3UTR CAA 90 bp AGATTAACAGCTGACTTCTCATCAGAAACAATGGAGTCCAGAGGGCAGTGGAATCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTA +
Preference number: 5 (lower is better)
Translates to: RLTADFSSETMESRGQWNRLGAT*TSSSLL
Trigger: TAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCG...ATTCCACTGCCCTCTGGACTCCATTGTTTCTGATGAGAAGTCAGCTGTTAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS TCA 90 bp ACCTGCCAAATCCTGAATGTTGGCATTCCACAGAGTGTGATCTGCTaGATGCTGGTTTTGCAAAATGGTAGTAAGGACAGAAGAGTATCC +
Preference number: 5 (lower is better)
Translates to: TCQILNVGIPQSVIC*MLVLQNGSKDRRVS
Trigger: GGATACTCTTCTGTCCTTACTACCATTTTGCAAAACCAGCATTCAGCAGATCACACTCTGTGGAATGCCAACATTCAGGATTTGGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478144.5
CDS-3UTR CAA 90 bp ATGGTGACTCCTGATAAGGAAACCCCAATAAGATTAACAGCTGACTTCTCATCATTGACTTCTTCATCCTaGCTATCTGCAGCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: MVTPDKETPIRLTADFSSLTSSS*LSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAA...TGATGAGAAGTCAGCTGTTAATCTTATTGGGGTTTCCTTATCAGGAGTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593030.6
CDS CCA 72 bp GGACTCCATCCAAGCCCTCACAACGTGCCAGCTGTGTaGGTCGCCCGTCTTCTGCCCGGCCCTCCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: GLHPSPHNVPAV*VARLLPGPPGR
Trigger: CCTGCCGGGAGGGCCGGGCAGAAGACGGGCGACCCACACAGCTGGCACGTTGTGAGGGCTTGGATGGAGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS GCA 72 bp CCTCAGCCTCAGGACTCCATCCAAGCCCTCACAACGTaGCAGCTGTGTGGGTCGCCCGTCTTCTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PQPQDSIQALTT*QLCGSPVFCPA
Trigger: GGCCGGGCAGAAGACGGGCGACCCACACAGCTGGCACGTTGTGAGGGCTTGGATGGAGTCCTGAGGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS CCA 72 bp GACAGAGGCCAAGCCTCCTGTGGCCCGATGGGGAGATaGGGTGCCTGTGACATCCCGTCCCCAGCCACACCT +
Preference number: 6 (lower is better)
Translates to: DRGQASCGPMGR*GACDIPSPATP
Trigger: AGGTGTGGCTGGGGACGGGATGTCACAGGCACCCCATCTCCCCATCGGGCCACAGGAGGCTTGGCCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS GCA 72 bp CACACACTCCATCACTCCGAGCCGACCCGACGCTGCTaGTCCTGGTCCCCGTTCCTGACGAGGATGCACAGG +
Preference number: 6 (lower is better)
Translates to: HTLHHSEPTRRC*SWSPFLTRMHR
Trigger: CCTGTGCATCCTCGTCAGGAACGGGGACCAGGAGCAGCAGCGTCGGGTCGGCTCGGAGTGATGGAGTGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS CCA 72 bp ACATTTGGCGCTCCCCAGAACCAGTGGCCCAGGCACTaGTACCCGGGTCTAGTGGCCCTGAGTCCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: TFGAPQNQWPRH*YPGLVALSPLP
Trigger: TGGGAGGGGACTCAGGGCCACTAGACCCGGGTACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS CCA 72 bp GAACCCTTCGGCACATTTGGCGCTCCCCAGAACCAGTaGCCCAGGCACTGGTACCCGGGTCTAGTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: EPFGTFGAPQNQ*PRHWYPGLVAL
Trigger: CAGGGCCACTAGACCCGGGTACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGTGCCGAAGGGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS CCA 72 bp CTCCATCACTCCGAGCCGACCCGACGCTGCTGCTCCTaGTCCCCGTTCCTGACGAGGATGCACAGGGTCTCA +
Preference number: 6 (lower is better)
Translates to: LHHSEPTRRCCS*SPFLTRMHRVS
Trigger: TGAGACCCTGTGCATCCTCGTCAGGAACGGGGACCAGGAGCAGCAGCGTCGGGTCGGCTCGGAGTGATGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS TCA 72 bp GCACAGGGTCTCAGCGGTCCCGCACTTGAAGCTGGCTaGCCTCGCTGCCTACTTCCTCCGCAGAGACTGCTC +
Preference number: 6 (lower is better)
Translates to: AQGLSGPALEAG*PRCLLPPQRLL
Trigger: GAGCAGTCTCTGCGGAGGAAGTAGGCAGCGAGGTCAGCCAGCTTCAAGTGCGGGACCGCTGAGACCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS CAA 90 bp GCCGTAAGACCCCCATACAGCCTGACTCAGAACCCTTCGGCACATTaGGCGCTCCCCAGAACCAGTGGCCCAGGCACTGGTACCCGGGTC +
Preference number: 6 (lower is better)
Translates to: AVRPPYSLTQNPSAH*ALPRTSGPGTGTRV
Trigger: GACCCGGGTACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGTGCCGAAGGGTTCTGAGTCAGGCTGTATGGGGGTCTTACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS CAA 90 bp TGGGGGTCGAAGTCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATCAGCAGCATG +
Preference number: 6 (lower is better)
Translates to: WGSKSVKERRLALSS*ATRTSVHSFSISSM
Trigger: CATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGACTTCGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357575.8
ENST00000478144.5
CDS GCA 72 bp ACACGTAGGTGGAGAAGCCGTCGGCGTTCTGCGTCCTaGGAATGTCCCGATACTGCGGGACGTAGGGCACCA +
Preference number: 6 (lower is better)
Translates to: TRRWRSRRRSAS*ECPDTAGRRAP
Trigger: TGGTGCCCTACGTCCCGCAGTATCGGGACATTCGCAGGACGCAGAACGCCGACGGCTTCTCCACCTACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357575.8
ENST00000397778.7
ENST00000474967.5
ENST00000478144.5
ENST00000589452.1
ENST00000590381.5
ENST00000591964.5
ENST00000593030.6
CDS CAA 72 bp CCCCCATACAGCCTGACTCAGAACCCTTCGGCACATTaGGCGCTCCCCAGAACCAGTGGCCCAGGCACTGGT +
Preference number: 6 (lower is better)
Translates to: PPYSLTQNPSAH*ALPRTSGPGTG
Trigger: ACCAGTGCCTGGGCCACTGGTTCTGGGGAGCGCCAAATGTGCCGAAGGGTTCTGAGTCAGGCTGTATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466449.5
CDS CAA 72 bp AAGTCTGTAAAGGAGCGGCGCCTGGCGTTGAGCTCGTaGGCCACACGGACCTCGGTGCACAGCTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: KSVKERRLALSS*ATRTSVHSFSI
Trigger: GATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTTACAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357575.8
ENST00000478144.5
CDS GCA 72 bp GAGACACGTTCCAAGTTCCGCAGCCAAGGAGAAGTATaGAGGCAAAGGACCATGACCCCGGCTCCCATCTCG +
Preference number: 6 (lower is better)
Translates to: ETRSKFRSQGEV*RQRTMTPAPIS
Trigger: CGAGATGGGAGCCGGGGTCATGGTCCTTTGCCTGCATACTTCTCCTTGGCTGCGGAACTTGGAACGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590895.1
CDS TCA 72 bp TGTGTGTGGCACGCACTCATAGAAAGCCCCAACCCCTaGCTGTTCCAGCGCGGGAATCTCAATCAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: CVWHALIESPNP*LFQRGNLNQPA
Trigger: TGCAGGCTGATTGAGATTCCCGCGCTGGAACAGTCAGGGGTTGGGGCTTTCTATGAGTGCGTGCCACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494607.5
CDS CAA 72 bp AAGGACCGCCTGGGGGCAACCTTGACTTCTTCATCCTaGCTATCTGCAGCTGAGGCTCCTTGCCTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: KDRLGATLTSSS*LSAAEAPCLES
Trigger: GCTTTCCAGGCAAGGAGCCTCAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS TCA 72 bp TTCAAAGCACCAGGAAGGACCGCCTGGGGGCAACCTTaGCTTCTTCATCCTTGCTATCTGCAGCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: FKAPGRTAWGQP*LLHPCYLQLRL
Trigger: GAGCCTCAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGTGCTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS CAA 72 bp ATTCAAAGCACCAGGAAGGACCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTATCTGCAGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: IQSTRKDRLGAT*TSSSLLSAAEA
Trigger: AGCCTCAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGTGCTTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS TCA 72 bp TCCACCATCCCACTCCCTTCTTATCCAACGGTCCTCTaGGACAAGCCTGAACCTGCACCTGCTGGTAAAATG +
Preference number: 6 (lower is better)
Translates to: STIPLPSYPTVL*DKPEPAPAGKM
Trigger: CATTTTACCAGCAGGTGCAGGTTCAGGCTTGTCTCAGAGGACCGTTGGATAAGAAGGGAGTGGGATGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469369.5
CDS GCA 72 bp CCTCTTCATAGGAAGAGCAGCAGACACCTTCCAATCTaGCCGGACAGAGAGGCAGAAGAGTATCCGCAAAAT +
Preference number: 6 (lower is better)
Translates to: PLHRKSSRHLPI*PDREAEEYPQN
Trigger: ATTTTGCGGATACTCTTCTGCCTCTCTGTCCGGGCAGATTGGAAGGTGTCTGCTGCTCTTCCTATGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS CAA 72 bp ATTCAAAGCACCAGGAAGGACCGCCTGGGGGCAACCTaGACTTCTTCATCCTTGCTATCTGCAGCTGTAAAG +
Preference number: 6 (lower is better)
Translates to: IQSTRKDRLGAT*TSSSLLSAAVK
Trigger: CTTTACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGTGCTTTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466449.5
ENST00000593030.6
CDS TCA 72 bp TATCTGCAGCTGAGGCTCCTTGCCTGGAAAGCAGTGTaGTCAGATCCACGTTTGTGTAGGATGGAATGCAGA +
Preference number: 6 (lower is better)
Translates to: YLQLRLLAWKAV*SDPRLCRMECR
Trigger: TCTGCATTCCATCCTACACAAACGTGGATCTGATCACACTGCTTTCCAGGCAAGGAGCCTCAGCTGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589000.5
CDS TCA 72 bp CCAAACAGGCAAAGAAGCAGGTACGTGATTACTCAGTaGCCAGAGTCAGAAGCAGAGTTCTTGACACCAGCT +
Preference number: 6 (lower is better)
Translates to: PNRQRSRYVITQ*PESEAEFLTPA
Trigger: AGCTGGTGTCAAGAACTCTGCTTCTGACTCTGGTCACTGAGTAATCACGTACCTGCTTCTTTGCCTGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000351365.7
CDS CCA 72 bp TCAAAGCGCCTTCCAAACCTGCCAAATCCTGAATGTTaGCATTCCACAGAGTGTGATCTGCTGAATGCTGGT +
Preference number: 6 (lower is better)
Translates to: SKRLPNLPNPEC*HSTECDLLNAG
Trigger: ACCAGCATTCAGCAGATCACACTCTGTGGAATGCCAACATTCAGGATTTGGCAGGTTTGGAAGGCGCTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478144.5
CDS TCA 72 bp ATCCTGAATGTTGGCATTCCACAGAGTGTGATCTGCTaGATGCTGGTTTTGCAAAATGGTAGTAAGGACAGA +
Preference number: 6 (lower is better)
Translates to: ILNVGIPQSVIC*MLVLQNGSKDR
Trigger: TCTGTCCTTACTACCATTTTGCAAAACCAGCATTCAGCAGATCACACTCTGTGGAATGCCAACATTCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478144.5