Pregenerated sensors for SLC66A1L (Homo sapiens)
Ensembl gene IDs: ENSG00000174899Ensembl transcript IDs: ENST00000461040.5, ENST00000468043.5, ENST00000498159.1, ENST00000650979.1, ENST00000651011.1, ENST00000651325.1, ENST00000651329.1, ENST00000652117.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGAAGGAGAAACCCACAGCACGCACGCAGGAGGCTGCCCTGCGTTaGCCAGCAGCCGGCGCCTCCGAGAGATCAGGGAAGAAAAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LKEKPTARTQEAALR*PAAGASERSGKKSC Trigger: ACAGCTTTTCTTCCCTGATCTCTCGGAGGCGCCGGCTGCTGGCCAACGCAGGGCAGCCTCCTGCGTGCGTGCTGTGGGTTTCTCCTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468043.5 ENST00000498159.1 ENST00000651325.1 |
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| CDS TCA 90 bp | ATGTACCGCCGTGTTCGGGCCCAACCTCAGGCAATGAGAGGAAACTaGAGGAGAAACCCACAGCACGCACGCAGGAGGCTGCCCTGCGTT | + |
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Preference number: 5 (lower is better) Translates to: MYRRVRAQPQAMRGN*RRNPQHARRRLPCV Trigger: AACGCAGGGCAGCCTCCTGCGTGCGTGCTGTGGGTTTCTCCTTCAGTTTCCTCTCATTGCCTGAGGTTGGGCCCGAACACGGCGGTACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461040.5 ENST00000468043.5 ENST00000498159.1 ENST00000650979.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS TCA 90 bp | CTCTCAAGGAAATGTACCGCCGTGTTCGGGCCCAACCTCAGGCAATaGGAGGAAACTGAAGGAGAAACCCACAGCACGCACGCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSRKCTAVFGPNLRQ*EETEGETHSTHAGG Trigger: GCCTCCTGCGTGCGTGCTGTGGGTTTCTCCTTCAGTTTCCTCTCATTGCCTGAGGTTGGGCCCGAACACGGCGGTACATTTCCTTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461040.5 ENST00000468043.5 ENST00000650979.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS TCA 90 bp | ATCTCAAGGAAATGTACCGCCGTGTTCGGGCCCAACCTCAGGCAATaGGAGGAAACTGAAGGAGAAACCCACAGCACGCACGCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISRKCTAVFGPNLRQ*EETEGETHSTHAGG Trigger: GCCTCCTGCGTGCGTGCTGTGGGTTTCTCCTTCAGTTTCCTCTCATTGCCTGAGGTTGGGCCCGAACACGGCGGTACATTTCCTTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498159.1 |
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| CDS GCA 90 bp | AACTCAATCTTGCTCTTCCCTGGTGTTTGTAGGTGGCAAGAGCTGTaGTGGAGGTTGAGGCCTTGCTCGAAGACACTTGCAGGTGCCACT | + |
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Preference number: 5 (lower is better) Translates to: NSILLFPGVCRWQEL*WRLRPCSKTLAGAT Trigger: AGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGGGAAGAGCAAGATTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS CCA 90 bp | TCAATCTTGCTCTTCCCTGGTGTTTGTAGGTGGCAAGAGCTGTGCTaGAGGTTGAGGCCTTGCTCGAAGACACTTGCAGGTGCCACTTGT | + |
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Preference number: 5 (lower is better) Translates to: SILLFPGVCRWQELC*RLRPCSKTLAGATC Trigger: ACAAGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGGGAAGAGCAAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS GCA 90 bp | CCTGGTGTTTGTAGGTGGCAAGAGCTGTGCTGGAGGTTGAGGCCTTaGTCGAAGACACTTGCAGGTGCCACTTGTCTGAAAAGTTCTAAT | + |
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Preference number: 5 (lower is better) Translates to: PGVCRWQELCWRLRP*SKTLAGATCLKSSN Trigger: ATTAGAACTTTTCAGACAAGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS TCA 90 bp | CAGCCTTCTAAGGCAGGTCAAGTGCTCTCCGGACGTATCAGTGCTTaGGTTTGCAGTGTTGACTCTATAGTTTCCCACGACTTTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: QPSKAGQVLSGRISA*VCSVDSIVSHDFHS Trigger: GCTATGAAAGTCGTGGGAAACTATAGAGTCAACACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461040.5 |
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| CDS TCA 90 bp | CTGACTTCTAAGGCAGGTCAAGTGCTCTCCGGACGTATCAGTGCTTaGGTTTGCAGTGTTGACTCTATAGTTTCCCACGACTTTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: LTSKAGQVLSGRISA*VCSVDSIVSHDFHS Trigger: GCTATGAAAGTCGTGGGAAACTATAGAGTCAACACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000650979.1 ENST00000651011.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS GCA 90 bp | CATGCTACAGTATTCCCAGGAGTTGGACACACATCTTGCAGGAGATaGCAAATCCATAAAGTCCCAGTCACACAAATCTTCCTGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: HATVFPGVGHTSCRR*QIHKVPVTQIFLSS Trigger: AGAGGACAGGAAGATTTGTGTGACTGGGACTTTATGGATTTGGCATCTCCTGCAAGATGTGTGTCCAACTCCTGGGAATACTGTAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468043.5 ENST00000498159.1 |
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| CDS TCA 90 bp | AAATCTTCTAAGGCAGGTCAAGTGCTCTCCGGACGTATCAGTGCTTaGGTTTGCAGTGTTGACTCTATAGTTTCCCACGACTTTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: KSSKAGQVLSGRISA*VCSVDSIVSHDFHS Trigger: GCTATGAAAGTCGTGGGAAACTATAGAGTCAACACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468043.5 |
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| CDS GCA 90 bp | CCAGTCACACAAATCTTCCTGTCCTCTACTGAGGAGATACGCAGTTaGACCTGTGATTCCATAATTAAAGTCTGGATGGTTGATGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: PVTQIFLSSTEEIRS*TCDSIIKVWMVDVA Trigger: AGCAACATCAACCATCCAGACTTTAATTATGGAATCACAGGTGCAACTGCGTATCTCCTCAGTAGAGGACAGGAAGATTTGTGTGACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468043.5 ENST00000498159.1 |
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| CDS GCA 90 bp | ATTCCATGTAAAGATTTCTTCATCAGCCTTCTAAGGCAGGTCAAGTaGTCTCCGGACGTATCAGTGCTTGAGTTTGCAGTGTTGACTCTA | + |
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Preference number: 5 (lower is better) Translates to: IPCKDFFISLLRQVK*SPDVSVLEFAVLTL Trigger: TAGAGTCAACACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGGCTGATGAAGAAATCTTTACATGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461040.5 |
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| CDS TCA 90 bp | TCCATACGTGAAGTTCCCAATCATGGCCAATGCAAACAGCAGAAATaGAGTTCCTTCCGTAGATCTTCTTCAGAACTGAATAGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SIREVPNHGQCKQQK*SSFRRSSSELNRQL Trigger: CAACTGCCTATTCAGTTCTGAAGAAGATCTACGGAAGGAACTTCATTTCTGCTGTTTGCATTGGCCATGATTGGGAACTTCACGTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650979.1 |
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| CDS GCA 90 bp | TATCATCTGCAAAGTGCTTCTATTAGTCAAGAGAGAGATACAAACTaGCACATAACAGGGCCTCTGTGGTTTATAATGATAATAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: YHLQSASISQERDTN*HITGPLWFIMIIAN Trigger: ATTAGCTATTATCATTATAAACCACAGAGGCCCTGTTATGTGGCAGTTTGTATCTCTCTCTTGACTAATAGAAGCACTTTGCAGATGATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS GCA 72 bp | AGGAGAAACCCACAGCACGCACGCAGGAGGCTGCCCTaGGTTGGCCAGCAGCCGGCGCCTCCGAGAGATCAG | + |
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Preference number: 6 (lower is better) Translates to: RRNPQHARRRLP*VGQQPAPPRDQ Trigger: CTGATCTCTCGGAGGCGCCGGCTGCTGGCCAACGCAGGGCAGCCTCCTGCGTGCGTGCTGTGGGTTTCTCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000468043.5 ENST00000498159.1 ENST00000650979.1 ENST00000651325.1 |
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| CDS GCA 72 bp | GCGACTGCCAGGGAAGGCACGCCCCACCCAGTCAGCTaGCAGGTTTGCGAGCACCACCTCCCAGGAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATAREGTPHPVS*QVCEHHLPGSS Trigger: GCTGCTTCCTGGGAGGTGGTGCTCGCAAACCTGGCAGCTGACTGGGTGGGGCGTGCCTTCCCTGGCAGTCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651325.1 |
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| CDS TCA 72 bp | CGTGTTCGGGCCCAACCTCAGGCAATGAGAGGAAACTaGAGGAGAAACCCACAGCACGCACGCAGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RVRAQPQAMRGN*RRNPQHARRRL Trigger: CAGCCTCCTGCGTGCGTGCTGTGGGTTTCTCCTTCAGTTTCCTCTCATTGCCTGAGGTTGGGCCCGAACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461040.5 ENST00000468043.5 ENST00000498159.1 ENST00000650979.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS TCA 72 bp | AAATGTACCGCCGTGTTCGGGCCCAACCTCAGGCAATaGGAGGAAACTGAAGGAGAAACCCACAGCACGCAC | + |
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Preference number: 6 (lower is better) Translates to: KCTAVFGPNLRQ*EETEGETHSTH Trigger: GTGCGTGCTGTGGGTTTCTCCTTCAGTTTCCTCTCATTGCCTGAGGTTGGGCCCGAACACGGCGGTACATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461040.5 ENST00000468043.5 ENST00000498159.1 ENST00000650979.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS TCA 72 bp | CTGGTGTTTGTAGGTGGCAAGAGCTGTGCTGGAGGTTaGGGCCTTGCTCGAAGACACTTGCAGGTGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: LVFVGGKSCAGG*GLARRHLQVPL Trigger: AAGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS CCA 72 bp | CTCTTCCCTGGTGTTTGTAGGTGGCAAGAGCTGTGCTaGAGGTTGAGGCCTTGCTCGAAGACACTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LFPGVCRWQELC*RLRPCSKTLAG Trigger: ACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGGGAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS GCA 72 bp | TGTAGGTGGCAAGAGCTGTGCTGGAGGTTGAGGCCTTaGTCGAAGACACTTGCAGGTGCCACTTGTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: CRWQELCWRLRP*SKTLAGATCLK Trigger: TTTCAGACAAGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS GCA 72 bp | TTGCTCTTCCCTGGTGTTTGTAGGTGGCAAGAGCTGTaGTGGAGGTTGAGGCCTTGCTCGAAGACACTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLFPGVCRWQEL*WRLRPCSKTLA Trigger: TGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGGGAAGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS CAA 90 bp | TTGCTCTTCCCTGGTGTTTGTAGGTGGCAAGAGCTGTGCTGGAGGTaGAGGCCTTGCTCGAAGACACTTGCAGGTGCCACTTGTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LLFPGVCRWQELCWR*RPCSKTLAGATCLK Trigger: TTTCAGACAAGTGGCACCTGCAAGTGTCTTCGAGCAAGGCCTCAACCTCCAGCACAGCTCTTGCCACCTACAAACACCAGGGAAGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS TCA 72 bp | AAGGCAGGTCAAGTGCTCTCCGGACGTATCAGTGCTTaGGTTTGCAGTGTTGACTCTATAGTTTCCCACGAC | + |
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Preference number: 6 (lower is better) Translates to: KAGQVLSGRISA*VCSVDSIVSHD Trigger: GTCGTGGGAAACTATAGAGTCAACACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461040.5 ENST00000468043.5 ENST00000650979.1 ENST00000651011.1 ENST00000651325.1 ENST00000651329.1 |
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| CDS GCA 72 bp | CATGCTACAGTATTCCCAGGAGTTGGACACACATCTTaGAGGAGATGCCAAATCCATAAAGTCCCAGTCACA | + |
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Preference number: 6 (lower is better) Translates to: HATVFPGVGHTS*RRCQIHKVPVT Trigger: TGTGACTGGGACTTTATGGATTTGGCATCTCCTGCAAGATGTGTGTCCAACTCCTGGGAATACTGTAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468043.5 ENST00000498159.1 |
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| CDS GCA 72 bp | AAAGATTTCTTCATCAGCCTTCTAAGGCAGGTCAAGTaGTCTCCGGACGTATCAGTGCTTGAGTTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: KDFFISLLRQVK*SPDVSVLEFAV Trigger: CACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGGCTGATGAAGAAATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461040.5 |
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| CDS GCA 72 bp | TTAGCTGCAAATGGATGTGGAGTTTTCTCTGGGTCTTaGGAGGTGTTTCACTCTTCTTCCAAGCCATGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LAANGCGVFSGS*EVFHSSSKPCN Trigger: GTTACATGGCTTGGAAGAAGAGTGAAACACCTCGCAAGACCCAGAGAAAACTCCACATCCATTTGCAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS CAA 90 bp | AGGCCAGGGGATTTCTCCTGGGCTTTCCACTTTACCTTTGTGATTTaGTCTAAGTCATTTAACTTCCTAGGGCCTCAATGTCCTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: RPGDFSWAFHFTFVI*SKSFNFLGPQCPHL Trigger: CAAATGAGGACATTGAGGCCCTAGGAAGTTAAATGACTTAGACAAAATCACAAAGGTAAAGTGGAAAGCCCAGGAGAAATCCCCTGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS GCA 72 bp | TACAAATTGTTTTCAAATCTTCTAAGGCAGGTCAAGTaGTCTCCGGACGTATCAGTGCTTGAGTTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: YKLFSNLLRQVK*SPDVSVLEFAV Trigger: CACTGCAAACTCAAGCACTGATACGTCCGGAGAGCACTTGACCTGCCTTAGAAGATTTGAAAACAATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468043.5 |
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| CDS GCA 72 bp | CAAATCTTCCTGTCCTCTACTGAGGAGATACGCAGTTaGACCTGTGATTCCATAATTAAAGTCTGGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: QIFLSSTEEIRS*TCDSIIKVWMV Trigger: AACCATCCAGACTTTAATTATGGAATCACAGGTGCAACTGCGTATCTCCTCAGTAGAGGACAGGAAGATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468043.5 ENST00000498159.1 |
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| CDS TCA 72 bp | GAAGTTCCCAATCATGGCCAATGCAAACAGCAGAAATaGAGTTCCTTCCGTAGATCTTCTTCAGAACTGAAT | + |
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Preference number: 6 (lower is better) Translates to: EVPNHGQCKQQK*SSFRRSSSELN Trigger: ATTCAGTTCTGAAGAAGATCTACGGAAGGAACTTCATTTCTGCTGTTTGCATTGGCCATGATTGGGAACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650979.1 |
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| CDS CAA 72 bp | AGTCTTATAAGCCTTGGTGTGTTTTCACCAGACTTTTaGCTTCTCCTTGTCCATGGGAACAGCATATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLISLGVFSPDF*LLLVHGNSIFH Trigger: ATGGAATATGCTGTTCCCATGGACAAGGAGAAGCAAAAAGTCTGGTGAAAACACACCAAGGCTTATAAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461040.5 |
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| CDS CAA 90 bp | ACAATAGAAACCAATTCTATAATCATGCTACAGTATTCCCAGGAGTaGGACACACATCTTGCAGGAGATGCCAAATCCATAAAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TIETNSIIMLQYSQE*DTHLAGDAKSIKSQ Trigger: CTGGGACTTTATGGATTTGGCATCTCCTGCAAGATGTGTGTCCAACTCCTGGGAATACTGTAGCATGATTATAGAATTGGTTTCTATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468043.5 ENST00000498159.1 |
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| CDS TCA 72 bp | GAAGTTCCCAATCATGGCCAATGCAAACAGCAGAAATaGAGTTCCTTCCGTAGATCTTCTTCAGAAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: EVPNHGQCKQQK*SSFRRSSSEIS Trigger: AGAAATTTCTGAAGAAGATCTACGGAAGGAACTTCATTTCTGCTGTTTGCATTGGCCATGATTGGGAACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652117.1 |
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| CDS CAA 90 bp | ACTGATGAAAGTCTTATAAGCCTTGGTGTGTTTTCACCAGACTTTTaGCTTCTCCTTGTCCATGGGAACAGCATATTCCATGTAAAGATT | + |
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Preference number: 6 (lower is better) Translates to: TDESLISLGVFSPDF*LLLVHGNSIFHVKI Trigger: AATCTTTACATGGAATATGCTGTTCCCATGGACAAGGAGAAGCAAAAAGTCTGGTGAAAACACACCAAGGCTTATAAGACTTTCATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461040.5 |
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| CDS GCA 72 bp | CAAAGTGCTTCTATTAGTCAAGAGAGAGATACAAACTaGCACATAACAGGGCCTCTGTGGTTTATAATGATA | + |
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Preference number: 6 (lower is better) Translates to: QSASISQERDTN*HITGPLWFIMI Trigger: TATCATTATAAACCACAGAGGCCCTGTTATGTGGCAGTTTGTATCTCTCTCTTGACTAATAGAAGCACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651011.1 ENST00000651329.1 |
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| CDS CAA 72 bp | AACAATGCTTTGATTCATACTGAAGTTGGCTACAAATaGTTTTCAAATCTTCTAAGGCAGGTCAAGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: NNALIHTEVGYK*FSNLLRQVKCS Trigger: AGAGCACTTGACCTGCCTTAGAAGATTTGAAAACAATTTGTAGCCAACTTCAGTATGAATCAAAGCATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468043.5 |
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