RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC5A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000117834

Ensembl transcript IDs: ENST00000236495.9, ENST00000425816.5, ENST00000438567.7, ENST00000441260.2, ENST00000471020.1, ENST00000493837.6, ENST00000525901.1, ENST00000527929.1, ENST00000532322.5, ENST00000533824.5

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGCTTGGGGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGGGCACTCCCCGGCTGGCCTCTCGGA +
Preference number: 1 (lower is better)
Translates to: PAWGFRLLLAQARVL*RSTSCRALPGWPLG
Trigger: TCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR GCA 90 bp AGGCTGCTCCTGGCCCAGGCTCGAGTTCTCTGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCT +
Preference number: 1 (lower is better)
Translates to: RLLLAQARVLCRSTS*RALPGWPLGYLRCA
Trigger: AGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR GCA 90 bp CTCCTGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTaGTCTCGTGGGCCTCCTTCTCCAGCTCAGAGAGGGGGCAGTTCC +
Preference number: 1 (lower is better)
Translates to: LLQGTPRLASRISPV*SRGPPSPAQRGGSS
Trigger: GGAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CCA 90 bp GGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCAGAGAGGGGGCAGTTCCGAGTCCAC +
Preference number: 1 (lower is better)
Translates to: GHSPAGLSDISGVLS*ASFSSSERGQFRVH
Trigger: GTGGACTCGGAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CCA 90 bp GCTCGAGTTCTCTGCCGCTCCACCTCCTGCAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: ARVLCRSTSCRALPG*PLGYLRCALVGLLL
Trigger: GAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CCA 90 bp CCATGTGAGGCGTGTGAGCTGAAACACACCTGGGCCCTGTCCTCATaGATTTTACAGACTGAGGCAAATGAGGCTGGACAGGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: PCEACELKHTWALSS*ILQTEANEAGQGGR
Trigger: CCTGCCTCCCTGTCCAGCCTCATTTGCCTCAGTCTGTAAAATCCATGAGGACAGGGCCCAGGTGTGTTTCAGCTCACACGCCTCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR TCA 90 bp GAACACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTaGCTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGT +
Preference number: 1 (lower is better)
Translates to: EHHKHSAHHHQLLLC*LPAEALPHINGEQG
Trigger: ACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
3UTR GCA 90 bp GCTGACAATGACAATGACGATGGCAGTGAGCCCGCAGAGGAGGATTaGAAAGTACAGGTAGTGGAAGTCCTTCAGCACTGCTGGCCTCCG +
Preference number: 1 (lower is better)
Translates to: ADNDNDDGSEPAEED*KVQVVEVLQHCWPP
Trigger: CGGAGGCCAGCAGTGCTGAAGGACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTCATTGTCATTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR CCA 90 bp CAGGTCTGGACGTTGCGGCAGCTTCCTGGCGAAGGGACACTTAACTaGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAA +
Preference number: 1 (lower is better)
Translates to: QVWTLRQLPGEGTLN*GHSVFQGMRIHGKQ
Trigger: TTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGGAAGCTGCCGCAACGTCCAGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 90 bp CTGGGTACAAAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTaGAGTCTTCCATCTCAGTGTGATCAGTGCTGTGACAGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: LGTKSLGIWPLVLAP*SLPSQCDQCCDRSR
Trigger: CCTGCTTCTGTCACAGCACTGATCACACTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTTTGTACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 90 bp CTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATaGGGATTCATGGCAAGCAAAGGGAGAAGGACAGAGAAGCACAGG +
Preference number: 1 (lower is better)
Translates to: LAKGHLTGVTVYSKV*GFMASKGRRTEKHR
Trigger: CCTGTGCTTCTCTGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 90 bp AGGCAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTaGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTT +
Preference number: 1 (lower is better)
Translates to: RQYIRKSGETPCDTF*VVLNKPSALSGLLF
Trigger: AAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR TCA 90 bp GTTTCTGTGGCTGACAGGCTTGGGCTTTGTTTAATCTGTCTACACTaGAGCCAGGTCTGTGGAATCACGCAAAATAGCCCCAGAGGAAGA +
Preference number: 1 (lower is better)
Translates to: VSVADRLGLCLICLH*SQVCGITQNSPRGR
Trigger: TCTTCCTCTGGGGCTATTTTGCGTGATTCCACAGACCTGGCTTCAGTGTAGACAGATTAAACAAAGCCCAAGCCTGTCAGCCACAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR CCA 90 bp TCTCTGGGCTTCTGTTTCTCCACTTGTCAAGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCTTGCAGTCTTGACTTCTGTGATCTC +
Preference number: 1 (lower is better)
Translates to: SLGFCFSTCQVCRLS*ILFRGACSLDFCDL
Trigger: GAGATCACAGAAGTCAAGACTGCAAGCTCCCCTGAAGAGAATCCAACTCAACCTGCACACTTGACAAGTGGAGAAACAGAAGCCCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 90 bp ACTTGTCAAGTGTGCAGGTTGAGTTGGATTCTCTTCAGGGGAGCTTaGAGTCTTGACTTCTGTGATCTCCAGTTTAGACAGCAAAGTAAG +
Preference number: 1 (lower is better)
Translates to: TCQVCRLSWILFRGA*SLDFCDLQFRQQSK
Trigger: CTTACTTTGCTGTCTAAACTGGAGATCACAGAAGTCAAGACTGCAAGCTCCCCTGAAGAGAATCCAACTCAACCTGCACACTTGACAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000236495.9
ENST00000438567.7
ENST00000532322.5
3UTR CCA 90 bp TACACATTTATTGAACAGCTGTTATTTTCTGGGTACAAAGTCACTTaGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCA +
Preference number: 1 (lower is better)
Translates to: YTFIEQLLFSGYKVT*DMALGPCPLESSIS
Trigger: TGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTTTGTACCCAGAAAATAACAGCTGTTCAATAAATGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTaGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAAAG +
Preference number: 1 (lower is better)
Translates to: DSHHCGATNGNIGLS*VNSCNKEIIGENRK
Trigger: CTTTCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 90 bp CAAGTCATGTCTCTCCAACTGCTTCTCAAGGCCATAGAGAGTTTGTaGATATTTGGGTTAGAGAGTAGGAAGAGGCAGAATTTAAATAGT +
Preference number: 1 (lower is better)
Translates to: QVMSLQLLLKAIESL*IFGLESRKRQNLNS
Trigger: ACTATTTAAATTCTGCCTCTTCCTACTCTCTAACCCAAATATGCACAAACTCTCTATGGCCTTGAGAAGCAGTTGGAGAGACATGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp TTTCCCCAGGACCTGCTTGGGGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGG +
Preference number: 2 (lower is better)
Translates to: FPQDLLGASGCSWPRLEFRALPG*PLGYLR
Trigger: CCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCT...GAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR-3UTR TCA 90 bp GCTGCTCCTGGCCCAGGCTCGAGTTCTCTGCCGCTCCACCTCCTGCAGGGCACTGGGCCAGGTAACTGGTaGCAGCCTGGATGTAGTCGA +
Preference number: 2 (lower is better)
Translates to: AAPGPGSSSLPLHLLQGTGPGNW*QPGCSR
Trigger: TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCC...AGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR CCA 90 bp GCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCGAGCTGAAACACACCTaGGCCCTGTCCTCATGGATT +
Preference number: 2 (lower is better)
Translates to: AGHSPAGLSDISGVLSWAELKHT*ALSSWI
Trigger: AATCCATGAGGACAGGGCCCAGGTGTGTTTCAGCTC...GGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR-3UTR GCA 90 bp ACGCAGAAGCCCCACTCCCAGGCCAAACACGAGGCCCCAGAAAGCTCCGGGCTCTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 2 (lower is better)
Translates to: TQKPHSQAKHEAPESSGLFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...GAGCCCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCCACCCCTTCGGGTCTaGCAGCCACCACTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQPPLRV*QPPLWS
Trigger: GCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGGGCTCCCCCTACCATaGTCACCGTCTGCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRGLPLP*SPSAEH
Trigger: ATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCC...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000441260.2
3UTR-3UTR TCA 90 bp CCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCCAAGGGAGGCAGGCACTTaGGAACAAGTCTTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: PRLASRISPVCSRGPPSPREAGT*EQVFKG
Trigger: ACCTTTGAAGACTTGTTCTCAAGTGCCTGCCTCCCT...TGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR-3UTR GCA 90 bp TCCCACTCGGGCCCCACAGATTCTTTGGCAGACATCAGGGTCCACGCAGCCCACTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 2 (lower is better)
Translates to: SHSGPTDSLADIRVHAAHFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...GTGGGCTGCGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGCCCGAGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
3UTR-3UTR TCA 90 bp ACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGGAGCCTCCCTTGGCATaGGACAGACTCTTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: TNTLPTTISSCSVDFLRKEPPLA*DRLLAE
Trigger: CTCGGCCAAGAGTCTGTCTCATGCCAAGGGAGGCTC...CTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441260.2
3UTR-3UTR GCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCTCCCAGGCTGTTTGTaGTGCCCGCTGTGGGGCTTA +
Preference number: 2 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQLPGCL*CPLWGL
Trigger: TAAGCCCCACAGCGGGCAGCACAAACAGCCTGGGAG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCTTAAAGTCCACCCTTaGCTCCCCACCCCTTCGGGT +
Preference number: 2 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQLKVHP*LPTPSG
Trigger: ACCCGAAGGGGTGGGGAGCCAAGGGTGGACTTTAAG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp CCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAGCCCCACAGATTCTTTaGCAGACATCAGGGTCCACG +
Preference number: 2 (lower is better)
Translates to: PQTLCPPPSAPALLTSCGAPQIL*QTSGST
Trigger: CGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGC...TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
3UTR-3UTR TCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIVKCAG*VGFSSG
Trigger: CCCTGAAGAGAATCCAACTCAACCTGCACACTTGAC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTGGGGAAACCCCGTGTaGCACCTTCTGGGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNWGNPV*HLLGGP
Trigger: AGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp GACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTGTAGATCACGGCCATaGGGCCACCTGCAATGGTGT +
Preference number: 2 (lower is better)
Translates to: DQLRVGNVGTSHSGPTDSCRSRP*GHLQWC
Trigger: ACACCATTGCAGGTGGCCTCATGGCCGTGATCTACA...AGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
3UTR-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACCAGGCTGTTTGTGCTaGCCGCTGTGGGGCTTACCC +
Preference number: 2 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTPGCLC*PLWGLP
Trigger: GGGTAAGCCCCACAGCGGGCAGCACAAACAGCCTGG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCCCCTCTTGCAGAAGATaGCCAGCAGGAAGAGAGCGG +
Preference number: 2 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSPSCRR*PAGRER
Trigger: CCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGG...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR TCA 90 bp GCCAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: ASKRTALMLQTCLQSGSSACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR-3UTR TCA 90 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTTGGCTGGCGCTGGGTATaGGAACTCCAGGATCATACG +
Preference number: 2 (lower is better)
Translates to: CCRHVSRVAPPQCLSASVGWRWV*ELQDHT
Trigger: CGTATGATCCTGGAGTTCTCATACCCAGCGCCAGCC...AACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR GCA 90 bp AACACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGACACCACAAACACTCTaGCCACCACCATCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: NTTNTLPTTISSCSVDFLTPQTL*PPPSAP
Trigger: AGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGT...CAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
3UTR-3UTR GCA 90 bp ATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTGCTCTGTTGACTTCCTaGGGAAGCGCTGCCACACAT +
Preference number: 2 (lower is better)
Translates to: MLQTCLQSGSSSMLVSFCALLTS*GSAATH
Trigger: ATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGC...ACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR GCA 90 bp ACTGAAGCCAGGTCTGTGGAATCACGCAAAATAGCCCCAGAGGAAGATGTTGATACTTTCCCCAGGACCTaGTTGGGGCTTCAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: TEARSVESRKIAPEEDVDTFPRT*LGLQAA
Trigger: AGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGT...ATCAACATCTTCCTCTGGGGCTATTTTGCGTGATTCCACAGACCTGGCTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CAA 90 bp GTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCCACTaGTCAAGTGTGCAGGTTGAGTTGGATTCTCTTCAGGGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: VLNKPSALSGLLFLH*SSVQVELDSLQGSL
Trigger: CAAGCTCCCCTGAAGAGAATCCAACTCAACCTGCACACTTGACAAGTGGAGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTGGAAACAGTGTGTTTaGGGTAGGTCTGTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQWKQCV*GRSVRQ
Trigger: TTGCCTTACAGACCTACCTCAAACACACTGTTTCCA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp AGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCATGTTGGAGCTTTGGATaGTGGGGATCCAGAGGATGC +
Preference number: 2 (lower is better)
Translates to: SKRTALMLQTCLQSGSSSCWSFG*WGSRGC
Trigger: GCATCCTCTGGATCCCCATCATCCAAAGCTCCAACA...TGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 90 bp GTTATTTTCTGGGTACAAAGTCACTTGGGATATGGCCCTTGGTCCTaGCCCCCTGGAGTCTTCCATCTCAGTGTGATCAGTGCTGTGACA +
Preference number: 2 (lower is better)
Translates to: VIFWVQSHLGYGPWS*PPGVFHLSVISAVT
Trigger: TGTCACAGCACTGATCACACTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTTTGTACCCAGAAAATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR GCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTTACCATCTGTCACCATaGTTAAAGTCCACCCTTGGC +
Preference number: 2 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIYHLSP*LKSTLG
Trigger: GCCAAGGGTGGACTTTAAGCATGGTGACAGATGGTA...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR GCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTGTCTAAGAGCTTTCTaGCCAAAATACCATCTGTCA +
Preference number: 2 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQCLRAF*PKYHLS
Trigger: TGACAGATGGTATTTTGGGCAGAAAGCTCTTAGACA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp ATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: IDVADMSPEWLLLNACQLVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...AAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR-3UTR TCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTGGAAACAGTGTGTTTaGGGTAGGTCTGTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNWKQCV*GRSVRQ
Trigger: TTGCCTTACAGACCTACCTCAAACACACTGTTTCCA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGG +
Preference number: 2 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIVKCAG*VGFSSG
Trigger: CCCTGAAGAGAATCCAACTCAACCTGCACACTTGAC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACATGTCTAAGAGCTTTCTaGCCAAAATACCATCTGTCA +
Preference number: 2 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTCLRAF*PKYHLS
Trigger: TGACAGATGGTATTTTGGGCAGAAAGCTCTTAGACA...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCCATAGAGAGTTTGTaGATATTTGGGTTAGAGAGT +
Preference number: 2 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTAIESL*IFGLES
Trigger: ACTCTCTAACCCAAATATGCACAAACTCTCTATGGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR TCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 90 bp GAGAGTAGGAAGAGGCAGAATTTAAATAGTGCTTTGGATAGTCCATaGTCTAAGAGCTTTCTGCCCAAAATACCATCTGTCACCATGCTT +
Preference number: 2 (lower is better)
Translates to: ESRKRQNLNSALDSP*SKSFLPKIPSVTML
Trigger: AAGCATGGTGACAGATGGTATTTTGGGCAGAAAGCTCTTAGACAATGGACTATCCAAAGCACTATTTAAATTCTGCCTCTTCCTACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGAGCAAAGGTGCTCTTaGATTTTTGCAAATTTCTTC +
Preference number: 2 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIEQRCS*IFANFF
Trigger: GAAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp GGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGGGCACTCCCCGGCTGG +
Preference number: 3 (lower is better)
Translates to: GFRLLLAQARVL*RSTSCRALPGW
Trigger: CCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR GCA 72 bp CTGGCCCAGGCTCGAGTTCTCTGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGGCCTCTCGGATATCTC +
Preference number: 3 (lower is better)
Translates to: LAQARVLCRSTS*RALPGWPLGYL
Trigger: GAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CCA 72 bp CCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCAGAGAGGGGGCAGTTC +
Preference number: 3 (lower is better)
Translates to: PAGLSDISGVLS*ASFSSSERGQF
Trigger: GAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR TCA 72 bp CCTCCGGTCCACCTCCCCACAGGCTGGCGCTGGGTATaGGAACTCCAGGATCATACGCAGAAGCCCCACTCC +
Preference number: 3 (lower is better)
Translates to: PPVHLPTGWRWV*ELQDHTQKPHS
Trigger: GGAGTGGGGCTTCTGCGTATGATCCTGGAGTTCTCATACCCAGCGCCAGCCTGTGGGGAGGTGGACCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR TCA 72 bp AAGCAGGTCAAGGCTATGGGAGCAGGAGTGGGAACTTaGCCCAGGTCTGGACGTTGCGGCAGCTTCCTGGCG +
Preference number: 3 (lower is better)
Translates to: KQVKAMGAGVGT*PRSGRCGSFLA
Trigger: CGCCAGGAAGCTGCCGCAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGCTCCCATAGCCTTGACCTGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp GATTGCAAAGTACAGGTAGTGGAAGTCCTTCAGCACTaGTGGCCTCCGGTCCACCTCCCCACAGGCTGGCGC +
Preference number: 3 (lower is better)
Translates to: DCKVQVVEVLQH*WPPVHLPTGWR
Trigger: GCGCCAGCCTGTGGGGAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTCCACTACCTGTACTTTGCAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR-3UTR CAA 90 bp CCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCCATGTCAAGTGTGCAGGTaGAGTTGGATTCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: PRLASRISPVCSRGPPSPCQVCR*SWILFR
Trigger: CCTGAAGAGAATCCAACTCAACCTGCACACTTGACA...TGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR-3UTR CAA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTTGGCTCCCAGGCTGTTaGTGCTGCCCGCTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIWLPGC*CCPLWG
Trigger: GCCCCACAGCGGGCAGCACAAACAGCCTGGGAGCCA...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 72 bp TGTGACAGAAGCAGGTCAAGGCTATGGGAGCAGGAGTaGGAACTTGACCCAGGTCTGGACGTTGCGGCAGCT +
Preference number: 3 (lower is better)
Translates to: CDRSRSRLWEQE*ELDPGLDVAAA
Trigger: AGCTGCCGCAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGCTCCCATAGCCTTGACCTGCTTCTGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGAGCAGGAGTGGGAACTaGACCCAGGTCTGGACGTTG +
Preference number: 3 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQSRSGN*TQVWTL
Trigger: CAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGCT...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR TCA 72 bp GTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTaGACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: VGKPRVTPSGWS*TNPVLSLGFCF
Trigger: GAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp ATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAACAGGGTGCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: ISSCSVDFLRKR*HTSMVNRVLLL
Trigger: CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
3UTR GCA 72 bp AACACCACAAACACTCTGCCCACCACCATCAGCTCCTaGTCTGTTGACTTCCTGCGGAAGCGCTGCCACACA +
Preference number: 3 (lower is better)
Translates to: NTTNTLPTTISS*SVDFLRKRCHT
Trigger: TGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
3UTR-3UTR CAA 90 bp AACACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGTCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCT +
Preference number: 3 (lower is better)
Translates to: NTTNTLPTTISSCSVDFLSAPAL*TSCGSA
Trigger: AGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGA...CAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
3UTR-3UTR CAA 90 bp CTGTTCCTCAGGGATGGGAGTTGTACAGAGGCTGACAATGACAATGACGATGGCGGCTCTGTGACCCTCTaGCAGAAGATGGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: LFLRDGSCTEADNDNDDGGSVTL*QKMASR
Trigger: CCTGCTGGCCATCTTCTGCAAGAGGGTCACAGAGCC...GCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATCCCTGAGGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
3UTR TCA 72 bp TTAAAGTCCACCCTTGGCTCCCCACCCCTTCGGGTCTaGCAGCCACCACTGTGGAGCCACCAATGGAAATAT +
Preference number: 3 (lower is better)
Translates to: LKSTLGSPPLRV*QPPLWSHQWKY
Trigger: ATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGGAGCCAAGGGTGGACTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp CTTGCCCCCTGGAGTCTTCCATCTCAGTGTGATCAGTaGTGTGACAGAAGCAGGTCAAGGCTATGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: LAPWSLPSQCDQ*CDRSRSRLWEQ
Trigger: CTGCTCCCATAGCCTTGACCTGCTTCTGTCACAGCACTGATCACACTGAGATGGAAGACTCCAGGGGGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 72 bp ATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTaGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: IRKSGETPCDTF*VVLNKPSALSG
Trigger: CCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATaGTTGTCAGCTTCTGTTCTAGCGCAGCCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: CCRHVSRVAPPQ*LSASVLAQPSL
Trigger: CAGAGAAGGCTGCGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR CCA 72 bp ACGTTGCGGCAGCTTCCTGGCGAAGGGACACTTAACTaGGGTCACAGTGTATTCCAAGGTATGCGGATTCAT +
Preference number: 3 (lower is better)
Translates to: TLRQLPGEGTLN*GHSVFQGMRIH
Trigger: ATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGGAAGCTGCCGCAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTGTCAAGTGTGCAGGTaGAGTTGGATTCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSCQVCR*SWILFR
Trigger: CCTGAAGAGAATCCAACTCAACCTGCACACTTGACA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR TCA 72 bp TGGGCTTCTGTTTCTCCACTTGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGGGAGCTTGCAGTCTTG +
Preference number: 3 (lower is better)
Translates to: WASVSPLVKCAG*VGFSSGELAVL
Trigger: CAAGACTGCAAGCTCCCCTGAAGAGAATCCAACTCAACCTGCACACTTGACAAGTGGAGAAACAGAAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR TCA 72 bp GCTGACAGGCTTGGGCTTTGTTTAATCTGTCTACACTaGAGCCAGGTCTGTGGAATCACGCAAAATAGCCCC +
Preference number: 3 (lower is better)
Translates to: ADRLGLCLICLH*SQVCGITQNSP
Trigger: GGGGCTATTTTGCGTGATTCCACAGACCTGGCTTCAGTGTAGACAGATTAAACAAAGCCCAAGCCTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
3UTR GCA 72 bp GGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATaGGGATTCATGGCAAGCAAAGGGAGAAGGACAGAG +
Preference number: 3 (lower is better)
Translates to: GHLTGVTVYSKV*GFMASKGRRTE
Trigger: CTCTGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 72 bp ATTGAACAGCTGTTATTTTCTGGGTACAAAGTCACTTaGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: IEQLLFSGYKVT*DMALGPCPLES
Trigger: AGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTTTGTACCCAGAAAATAACAGCTGTTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGTGTCAAGTGTGCAGGTaGAGTTGGATTCTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGCQVCR*SWILFR
Trigger: CCTGAAGAGAATCCAACTCAACCTGCACACTTGACA...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGGTGCTCTTGGATTTTaGCAAATTTCTTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTGALGF*QISSCS
Trigger: GGAGCAGGAAGAAATTTGCAAAAATCCAAGAGCACC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGGAGCAAAGGTGCTCTaGGATTTTTGCAAATTTCTT +
Preference number: 3 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTGAKVL*DFCKFL
Trigger: AAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTCC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp TCTCTCCAACTGCTTCTCAAGGCCATAGAGAGTTTGTaGATATTTGGGTTAGAGAGTAGGAAGAGGCAGAAT +
Preference number: 3 (lower is better)
Translates to: SLQLLLKAIESL*IFGLESRKRQN
Trigger: ATTCTGCCTCTTCCTACTCTCTAACCCAAATATGCACAAACTCTCTATGGCCTTGAGAAGCAGTTGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CCA 72 bp CACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTaGGTAAATTCATGCAACAAAGAGATTATTGGTGAG +
Preference number: 3 (lower is better)
Translates to: HCGATNGNIGLS*VNSCNKEIIGE
Trigger: CTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR GCA 72 bp ATAGTGCTTTGGATAGTCCATTGTCTAAGAGCTTTCTaGCCAAAATACCATCTGTCACCATGCTTAAAGTCC +
Preference number: 3 (lower is better)
Translates to: IVLWIVHCLRAF*PKYHLSPCLKS
Trigger: GGACTTTAAGCATGGTGACAGATGGTATTTTGGGCAGAAAGCTCTTAGACAATGGACTATCCAAAGCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR-3UTR CAA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGACTTCTGTTTCTCCACTaGTCAAGTGTGCAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRLLFLH*SSVQVE
Trigger: CTCAACCTGCACACTTGACAAGTGGAGAAACAGAAG...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR TCA 72 bp TTTCTACTCTCAAGACACACATTCAGTAAAGGCTACTaGATACATTCAAGAAGAGGGTGGAAACAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: FLLSRHTFSKGY*IHSRRGWKQCV
Trigger: AACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGAATGTGTGTCTTGAGAGTAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CRALPGWPLGYLRCALVGQARVL*RSTSCR
Trigger: CCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTG...GCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp GCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCAAGCTCCGGGCTCTGTaGCCCTCTTGCAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: AGHSPAGLSDISGVLSWAKLRAL*PSCRRW
Trigger: CCATCTTCTGCAAGAGGGTCACAGAGCCCGGAGCTT...GGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TTTCCCCAGGACCTGCTTGGGGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCGCTGGGCTCAGGGCCTaGTCCGGTGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FPQDLLGASGCSWPRLEFAGLRA*SGVPES
Trigger: GCTCTCTGGAACACCGGAGCAGGCCCTGAGCCCAGC...GAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp TGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: CRALPGWPLGYLRCALVGSGVLS*ASFSSS
Trigger: TGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGA...GCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp GCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCGATACTGCGGCATTGTaGCCACACCTGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: AGHSPAGLSDISGVLSWADTAAL*PHLLRC
Trigger: ACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATC...GGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCGGATATCTCCGGTGTaGTCTCGTGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CRALPGWPLGYLRCALVGRISPV*SRGPPS
Trigger: AGAAGGAGGCCCACGAGAGCACACCGGAGATATCCG...GCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR GCA 90 bp CCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCCAGGCCATGAGGCCACCTaGAATGGTGTAGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRLASRISPVCSRGPPSPGHEAT*NGVDGS
Trigger: ACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCC...TGGAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATATGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNICRSTS*RALPGW
Trigger: CCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCA...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTTCCCCAGGACCTGCTTGGGGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCCAGGAGCAGCCAGGTTaGGTTCCACTCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: FPQDLLGASGCSWPRLEFQEQPG*VPLEAT
Trigger: GGTGGCTTCGAGTGGAACGCAACCTGGCTGCTCCTG...GAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp GGGCAGTTCCGAGTCCACCATGTGAGGCGTGTGAGCTGTTCCTCAGGGATGGGAGCAGCCCACCTCGTCTaGGAACAGGGCCCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQFRVHHVRRVSCSSGMGAAHLV*EQGPAD
Trigger: ATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGC...TCCCATCCCTGAGGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp AAGCCCCACTCCCAGGCCAAACACGAGGCCCCAGAAAGCTCCGGGCTCTGTGACGGCTGGCGCTGGGTATaGGAACTCCAGGATCATACG +
Preference number: 4 (lower is better)
Translates to: KPHSQAKHEAPESSGLCDGWRWV*ELQDHT
Trigger: CGTATGATCCTGGAGTTCTCATACCCAGCGCCAGCC...GTCACAGAGCCCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GACGATGGCAGTGAGCCCGCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCTGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: DDGSEPAEEDCKVQVVEVCRSTS*RALPGW
Trigger: CCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCA...GACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TGTGACCCTCTTGCAGAAGATGGCCAGCAGGAAGAGAGCGGTGATGGGTGGGGCCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CDPLAEDGQQEESGDGWGQARVL*RSTSCR
Trigger: CCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTG...GCCCCACCCATCACCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GGCCTCCTTCTCCAGCTCAGAGAGGGGGCAGTTCCGAGTCCACCATGTGAGGCGACTTTCCCCAGGACCTaGTTGGGGCTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GLLLQLREGAVPSPPCEATFPRT*LGLQAA
Trigger: AGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGT...CGCCTCACATGGTGGACTCGGAACTGCCCCCTCTCTGAGCTGGAGAAGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACCGCTGCTCCAGGCCTaGGTACCAGCCCACGTCCTG +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIPLLQA*VPAHVL
Trigger: CAGGACGTGGGCTGGTACCCAGGCCTGGAGCAGCGG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGHSPAGLSDISGVLSWAVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...GGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR TCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGAGCTGTCTCAGTCCTaGCCCCGTCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRELSQS*PRPLKL
Trigger: GAGCTTCAGGGGACGGGGTCAGGACTGAGACAGCTC...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp AGCTCAGAGAGGGGGCAGTTCCGAGTCCACCATGTGAGGCGTGTGAGCTGTTCCTCCCAGCCAGGCCGATaGACAAGCCACTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SSERGQFRVHHVRRVSCSSQPGR*TSHCPH
Trigger: ATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGA...GGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCCCCTCTCTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCAACTCTGGAGTCCAGTaGTATGTGTGGAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CRALPGWPLGYLRCALVGNSGVQ*YVWSCL
Trigger: GAGACAGCTCCACACATAGCACTGGACTCCAGAGTT...GCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCCGCTGCTCCAGGCCTaGGTACCAGCCCACGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQPLLQA*VPAHVL
Trigger: CAGGACGTGGGCTGGTACCCAGGCCTGGAGCAGCGG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCCCACTCGGGCCCCACAGATTCTTTGGCAGACATCAGGGTCCACGCAGCCCACGCACGGAGCCTCCCTTaGCATGAGACAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SHSGPTDSLADIRVHAAHARSLP*HETDSW
Trigger: CCAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGC...GTGGGCTGCGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGCCCGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
CDS-3UTR TCA 90 bp CCACTCGGGCCCCACAGATTCTTTGGCAGACATCAGGGTCCACGCAGCCCACCTGATACTGCGGCATTGTaGCCACACCTGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: PLGPHRFFGRHQGPRSPPDTAAL*PHLLRC
Trigger: ACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATC...AGGTGGGCTGCGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGCCCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
CDS-3UTR TCA 90 bp TTTCCCCAGGACCTGCTTGGGGCTTCAGGCTGCTCCTGGCCCAGGCTCGAGTTCCCAATGCCATCTGGATaGAGAGGGCTCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FPQDLLGASGCSWPRLEFPMPSG*RGLQRR
Trigger: TCTTCTCTGGAGCCCTCTTCATCCAGATGGCATTGG...GAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTCGGGCCGTGGGAGGTaGCAGGTGGTGTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQSGRGR*QVVLGT
Trigger: AGTCCCCAACACCACCTGTCACCTCCCACGGCCCGA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGCCTGCCTGTACCGCTaGTCCAGGCCTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQACLYR*SRPGYQ
Trigger: CTGGTACCCAGGCCTGGAGCAGCGGTACAGGCAGGC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSCRSTS*RALPGW
Trigger: CCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCA...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGG +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSRALPG*PLGYLR
Trigger: CCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCT...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TGTGACCCTCTTGCAGAAGATGGCCAGCAGGAAGAGAGCGGTGATGGGTGGGGCTGTAGATCACGGCCATaGGGCCACCTGCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: CDPLAEDGQQEESGDGWGCRSRP*GHLQWC
Trigger: ACACCATTGCAGGTGGCCTCATGGCCGTGATCTACA...GCCCCACCCATCACCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp GACTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGTGCTGCTGCTGGGGCCAGGTAACTGGTaGCAGCCTGGATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: DFLRKRCHTSMVNRVLLLGPGNW*QPGCSR
Trigger: TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCC...CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp CCACTCGGGCCCCACAGATTCTTTGGCAGACATCAGGGTCCACGCAGCCCACCTAATGGTCCCTCGACTTaGACGGATGGACGACCAGAT +
Preference number: 4 (lower is better)
Translates to: PLGPHRFFGRHQGPRSPPNGPST*TDGRPD
Trigger: ATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATT...AGGTGGGCTGCGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGCCCGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTCAGGAGCAGCCAGGTTaGCTGGGACCTGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSQEQPG*LGPDPS
Trigger: ACTGGGGTCAGGTCCCAGGCAACCTGGCTGCTCCTG...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR GCA 90 bp TCATACGCAGAAGCCCCACTCCCAGGCCAAACACGAGGCCCCAGAAAGCTCCGGACACCACAAACACTCTaGCCACCACCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SYAEAPLPGQTRGPRKLRTPQTL*PPPSAP
Trigger: AGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGT...CCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGAAGTCCTTCAGCACTaGTGGCCTCCGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIEVLQH*WPPVHL
Trigger: GAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTGCCGCTCCACCTCCTaGAGGGCACTCCCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNCRSTS*RALPGW
Trigger: CCAGCCGGGGAGTGCCCTGCAGGAGGTGGAGCGGCA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACTCCCAGGCTGTTTGTaGTGCCCGCTGTGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNILPGCL*CPLWGL
Trigger: TAAGCCCCACAGCGGGCAGCACAAACAGCCTGGGAG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGACAGGAGCAGCCAGGTTaGGTTCCACTCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: PQTLCPPPSAPALLTSCGQEQPG*VPLEAT
Trigger: GGTGGCTTCGAGTGGAACGCAACCTGGCTGCTCCTG...TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp GACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTGCAGCCCACCTCGTCTaGGAACAGGGCCCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: DQLRVGNVGTSHSGPTDSAAHLV*EQGPAD
Trigger: ATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGC...AGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGAGCCTCCCTTGGCATaGGACAGACTCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQEPPLA*DRLLAE
Trigger: CTCGGCCAAGAGTCTGTCTCATGCCAAGGGAGGCTC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GGGCAGTTCCGAGTCCACCATGTGAGGCGTGTGAGCTGTTCCTCAGGGATGGGATGTTGGAGCTTTGGATaGTGGGGATCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: GQFRVHHVRRVSCSSGMGCWSFG*WGSRGC
Trigger: GCATCCTCTGGATCCCCATCATCCAAAGCTCCAACA...TCCCATCCCTGAGGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGCTGGCGCTGGGTATaGGAACTCCAGGATCATACG +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIGWRWV*ELQDHT
Trigger: CGTATGATCCTGGAGTTCTCATACCCAGCGCCAGCC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAGGATCATACGCAGAAGCCCCACTCCCAGGCCAAACACGAGGCCCCAGAAAGCCCCAGAGGAAGATGTTaGTGGCCAGCAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: QDHTQKPHSQAKHEAPESPRGRC*WPAKGQ
Trigger: CTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGG...GCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGTATGATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCCACCCCTTCGGGTCTaGCAGCCACCACTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLPPLRV*QPPLWS
Trigger: GCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGCAGGAGTGGGAACTTaGCCCAGGTCTGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSAGVGT*PRSGRC
Trigger: GCAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAGCTCCAGGCCCCATTaGTGCCAGCTCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TTNTLPTTISSCSVDFLRSSRPH*CQLLAH
Trigger: ATGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCT...CCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAAGCTCCAGGCCCCATTaGTGCCAGCTCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNISSRPH*CQLLAH
Trigger: ATGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCT...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGGGCCATGAGGCCACCTaGAATGGTGTAGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: TTNTLPTTISSCSVDFLRGHEAT*NGVDGS
Trigger: ACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCC...CCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCGCTGGGCTCAGGGCCTaGTCCGGTGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLAGLRA*SGVPES
Trigger: GCTCTCTGGAACACCGGAGCAGGCCCTGAGCCCAGC...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR GCA 90 bp GCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCCAGATAGACTGTAAGTaGCAGGATCTTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGHSPAGLSDISGVLSWAQIDCK*QDLQSS
Trigger: AGAACTTTGAAGATCCTGGCACTTACAGTCTATCTG...GGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CCA 90 bp CCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGATGGTCAACAGCAGGCTaGACTTTGAGGCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PQTLCPPPSAPALLTSCGWSTAG*TLRRSW
Trigger: CCAGGAGCGCCTCAAAGTCCAGCCTGCTGTTGACCA...TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACCAGCAGGATCCCTGTaGAGAGGTACAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIPAGSL*RGTGSS
Trigger: GCTGGAACCTGTACCTCTCCACAGGGATCCTGCTGG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGCCCCACAGATTCTTTaGCAGACATCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRAPQIL*QTSGST
Trigger: CGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGC...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIRALPG*PLGYLR
Trigger: CCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCT...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTTCAGGCTGCTCCTaGCCCAGGCTCGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSASGCS*PRLEFS
Trigger: AGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGCTTCAGGCTGCTCCTaGCCCAGGCTCGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQASGCS*PRLEFS
Trigger: AGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 72 bp AATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTaGGCAGACATCAGGGTCCACGCAGCCCACCTCGTC +
Preference number: 4 (lower is better)
Translates to: NVGTSHSGPTDS*ADIRVHAAHLV
Trigger: GACGAGGTGGGCTGCGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441260.2
CDS-3UTR TCA 90 bp CAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACAGAGCTGTCTCAGTCCTaGCCCCGTCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QTNRHEGHDQLRVGNVGTELSQS*PRPLKL
Trigger: GAGCTTCAGGGGACGGGGTCAGGACTGAGACAGCTC...TGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTGGGCTCCCCCTACCATaGTCACCGTCTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSGLPLP*SPSAEH
Trigger: ATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCC...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATGGGCTCCCCCTACCATaGTCACCGTCTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: HDQLRVGNVGTSHSGPTDGLPLP*SPSAEH
Trigger: ATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCC...ATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGAAAGCCCAGAAACATaGGGACCAGGGCTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSESPET*GPGLPL
Trigger: TAGGGGGAGCCCTGGTCCTCATGTTTCTGGGCTTTC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AACACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGGAGCCTCCCTTGGCATaGGACAGACTCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: NTTNTLPTTISSCSVDFLEPPLA*DRLLAE
Trigger: CTCGGCCAAGAGTCTGTCTCATGCCAAGGGAGGCTC...CAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGGGCCAGGTAACTGGTaGCAGCCTGGATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQGPGNW*QPGCSR
Trigger: TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGGCTGGCGCTGGGTATaGGAACTCCAGGATCATACG +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSGWRWV*ELQDHT
Trigger: CGTATGATCCTGGAGTTCTCATACCCAGCGCCAGCC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAGCTCAGAGAGGGGGCAGTTCCGAGTCCACCATGTGAGGCGTGTGAGCTGAAAGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLREGAVPSPPCEACELKACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...TTTCAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCCCCTCTCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR TCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTGGGGAAACCCCGTGTaGCACCTTCTGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSWGNPV*HLLGGP
Trigger: AGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGTGCTGCTGCTGGCTGGACATCAGAGATaGTCCAATTGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DFLRKRCHTSMVNRVLLLAGHQR*SNWPPA
Trigger: AGCTGGTGGCCAATTGGAGCATCTCTGATGTCCAGC...CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp GACTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGTGCTGCTGCTGAGCCACTGCCCACATTaGTGGACATCAGAGATGCTC +
Preference number: 4 (lower is better)
Translates to: DFLRKRCHTSMVNRVLLLSHCPH*WTSEML
Trigger: GAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCT...CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGCCTGCCTGTACCGCTaGTCCAGGCCTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNACLYR*SRPGYQ
Trigger: CTGGTACCCAGGCCTGGAGCAGCGGTACAGGCAGGC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGACACCACAAACACTCTaGCCACCACCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRTPQTL*PPPSAP
Trigger: AGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGT...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp GCCAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCGAAGTCCTTCAGCACTaGTGGCCTCCGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: ASKRTALMLQTCLQSGSSEVLQH*WPPVHL
Trigger: GAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTC...GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTCGGATATCTCCGGTGTaGTCTCGTGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSRISPV*SRGPPS
Trigger: AGAAGGAGGCCCACGAGAGCACACCGGAGATATCCG...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCCAGGCTGTTTGTGCTaGCCGCTGTGGGGCTTACCC +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIPGCLC*PLWGLP
Trigger: GGGTAAGCCCCACAGCGGGCAGCACAAACAGCCTGG...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTGGTCAACAGCAGGCTaGACTTTGAGGCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQWSTAG*TLRRSW
Trigger: CCAGGAGCGCCTCAAAGTCCAGCCTGCTGTTGACCA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR CCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGCGTGCAGACCAACTCTaGAGTCCAGTGCTATGTGTG +
Preference number: 4 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRRADQL*SPVLCV
Trigger: CACACATAGCACTGGACTCCAGAGTTGGTCTGCACG...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp GACGATGGCAGTGAGCCCGCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCCTCGACTTGCACGGATaGACGACCAGATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DDGSEPAEEDCKVQVVEVLDLHG*TTRSPQ
Trigger: CTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAG...GACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTTTGGCCACCAGCTCATaGACCTCCCGGCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSLATSS*TSRPGN
Trigger: ATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAA...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GGCAATCATCAGCCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGCAGAGATGCTCCAATTaGCCACCAGCTCATGGACCT +
Preference number: 4 (lower is better)
Translates to: GNHQPPQTNRHEGHDQLRQRCSN*PPAHGP
Trigger: AGGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTG...CCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGGCTGATGATTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACATGAGACAGACTCTTaGCCGAGAGAGACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIHETDS*PRETAA
Trigger: TGCAGCGGTCTCTCTCGGCCAAGAGTCTGTCTCATG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGACATGAGACAGACTCTTaGCCGAGAGAGACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQTLCPPPSAPALLTSCGHETDS*PRETAA
Trigger: TGCAGCGGTCTCTCTCGGCCAAGAGTCTGTCTCATG...TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTCCCTCTTGCAGAAGATaGCCAGCAGGAAGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSPSCRR*PAGRER
Trigger: CCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGG...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACGATGGCAGTGAGCCCGCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCCCCTCTTGCAGAAGATaGCCAGCAGGAAGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: DDGSEPAEEDCKVQVVEVPSCRR*PAGRER
Trigger: CCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGG...GACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSSGVLS*ASFSSS
Trigger: TGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 72 bp CAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCTGCCACACATCAATGG +
Preference number: 4 (lower is better)
Translates to: QTLCPPPSAPAL*TSCGSAATHQW
Trigger: CCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGTCCCAGCCAGGCCGATaGACAAGCCACTGCCCACAT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLSQPGR*TSHCPH
Trigger: ATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGA...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGGTTGCCTGGGACCTaGCCCCAGTCCTCCCGTGTG +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGRLPGT*PQSSRV
Trigger: CACACGGGAGGACTGGGGTCAGGTCCCAGGCAACCT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR TCA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCGGGCTCCCCCTACCATaGTCACCGTCTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLGLPLP*SPSAEH
Trigger: ATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCC...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGGGCTCCCCCTACCATaGTCACCGTCTGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLGLPLP*SPSAEH
Trigger: ATGCTCTGCAGACGGTGATCATGGTAGGGGGAGCCC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACATCGGGCCGTGGGAGGTaGCAGGTGGTGTTGGGGACT +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTSGRGR*QVVLGT
Trigger: AGTCCCCAACACCACCTGTCACCTCCCACGGCCCGA...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGAGCCTCCCTTGGCATaGGACAGACTCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLEPPLA*DRLLAE
Trigger: CTCGGCCAAGAGTCTGTCTCATGCCAAGGGAGGCTC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTAAGCTCCGGGCTCTGTaGCCCTCTTGCAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSKLRAL*PSCRRW
Trigger: CCATCTTCTGCAAGAGGGTCACAGAGCCCGGAGCTT...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACCACCCCTTCGGGTCTaGCAGCCACCACTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTPPLRV*QPPLWS
Trigger: GCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAGCTGGACATCAGAGATaGTCCAATTGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: PQTLCPPPSAPALLTSCGAGHQR*SNWPPA
Trigger: AGCTGGTGGCCAATTGGAGCATCTCTGATGTCCAGC...TCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTCATTGTGACCACACCTaGTGCGATGTACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPQTNRHEGHDQLRVGNVHCDHT*CDVHRD
Trigger: GTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATG...AACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTACATTAGGGATGGCCTaGCTGTACCGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSTLGMA*LYRCSR
Trigger: CCTGGAGCAGCGGTACAGGCAGGCCATCCCTAATGT...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTGCCGAGAGAGACCGCTaGACAATGACCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSAERDR*TMTWSV
Trigger: CACAGACCAGGTCATTGTGCAGCGGTCTCTCTCGGC...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTGTTGACTTCCTaGGGAAGCGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSALLTS*GSAATH
Trigger: ATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNQARVL*RSTSCR
Trigger: CCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTG...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGACTTTCCCCAGGACCTaGTTGGGGCTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RHEGHDQLRVGNVGTSHSTFPRT*LGLQAA
Trigger: AGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGT...CGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCTGGGCTCAGGGCCTaGTCCGGTGTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTAGLRA*SGVPES
Trigger: GCTCTCTGGAACACCGGAGCAGGCCCTGAGCCCAGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGGCCGAGAGAGACCGCTaGACAATGACCCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: TTNTLPTTISSCSVDFLRAERDR*TMTQKH
Trigger: ATGTTTCTGGGTCATTGTGCAGCGGTCTCTCTCGGC...CCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CCCCCGCAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGCCGAGAGAGACCGCTaGACAATGACCCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: PPQTNRHEGHDQLRVGNVAERDR*TMTQKH
Trigger: ATGTTTCTGGGTCATTGTGCAGCGGTCTCTCTCGGC...AACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp AGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGCTCGACTTGCACGGATaGACGACCAGATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RHEGHDQLRVGNVGTSHSLDLHG*TTRSPQ
Trigger: CTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAG...CGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTTGGCCACCAGCTCATaGACCTCCCGGCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSLATSS*TSRPGN
Trigger: ATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTTGGCCACCAGCTCATaGACCTCCCGGCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: DQLRVGNVGTSHSGPTDSLATSS*TSRPGN
Trigger: ATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAA...AGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCAGCCCACCTCGTCTaGGAACAGGGCCCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTAAHLV*EQGPAD
Trigger: ATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGCCCCACAGATTCTTTaGCAGACATCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQAPQIL*QTSGST
Trigger: CGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLSGVLS*ASFSSS
Trigger: TGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGA...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTCCGGTGTGCTCTCGTaGGCCTCCTTCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSSGVLS*ASFSSS
Trigger: TGAGCTGGAGAAGGAGGCCCACGAGAGCACACCGGA...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp ATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGG +
Preference number: 4 (lower is better)
Translates to: IDVADMSPEWLLLNACQLRALPG*PLGYLR
Trigger: CCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCT...AAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCGCTTCAGGCTGCTCCTaGCCCAGGCTCGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLASGCS*PRLEFS
Trigger: AGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGC...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCTTAAAGTCCACCCTTaGCTCCCCACCCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSLKVHP*LPTPSG
Trigger: ACCCGAAGGGGTGGGGAGCCAAGGGTGGACTTTAAG...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGAGCTGTCTCAGTCCTaGCCCCGTCCCCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGELSQS*PRPLKL
Trigger: GAGCTTCAGGGGACGGGGTCAGGACTGAGACAGCTC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCGAGCCTCCCTTGGCATaGGACAGACTCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: LMLQTCLQSGSSSMLVSFEPPLA*DRLLAE
Trigger: CTCGGCCAAGAGTCTGTCTCATGCCAAGGGAGGCTC...GAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTTGTTGGAGCTTTGGATaGTGGGGATCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSCWSFG*WGSRGC
Trigger: GCATCCTCTGGATCCCCATCATCCAAAGCTCCAACA...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTGTTGGAGCTTTGGATaGTGGGGATCCAGAGGATGC +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQCWSFG*WGSRGC
Trigger: GCATCCTCTGGATCCCCATCATCCAAAGCTCCAACA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGGGCCAGGTAACTGGTaGCAGCCTGGATGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIGPGNW*QPGCSR
Trigger: TCGACTACATCCAGGCTGTCACCAGTTACCTGGCCC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCCTTCTGGGTGGTCCTaGACAAACCCAGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSPSGWS*TNPVLS
Trigger: AGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGG...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGCAGGAGTGGGAACTTaGCCCAGGTCTGGACGTTGC +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNAGVGT*PRSGRC
Trigger: GCAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACGATGGCAGTGAGCCCGCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCAATGGTCCCTCGACTTaGACGGATGGACGACCAGAT +
Preference number: 4 (lower is better)
Translates to: DDGSEPAEEDCKVQVVEVNGPST*TDGRPD
Trigger: ATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATT...GACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGAATGGTCCCTCGACTTaGACGGATGGACGACCAGAT +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQNGPST*TDGRPD
Trigger: ATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATT...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACGATGGCAGTGAGCCCGCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCAGCCACTGCCCACATTaGTGGACATCAGAGATGCTC +
Preference number: 4 (lower is better)
Translates to: DDGSEPAEEDCKVQVVEVSHCPH*WTSEML
Trigger: GAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCT...GACTTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGCTCACTGCCATCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTAGCCACTGCCCACATTaGTGGACATCAGAGATGCTC +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSSHCPH*WTSEML
Trigger: GAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCT...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTTGTGACCACACCTGCTaGGATGTACACAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSCDHTC*DVHRDE
Trigger: TTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACA...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTCATTGTGACCACACCTaGTGCGATGTACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSHCDHT*CDVHRD
Trigger: GTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATG...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CGCTGCACAATGACCCAGAAACATGAGGACCAGGGCTCCCCCTACCATGATCACCGCTTCTTCAGATACTaGGGCATTGTGACCACACCT +
Preference number: 4 (lower is better)
Translates to: RCTMTQKHEDQGSPYHDHRFFRY*GIVTTP
Trigger: AGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCG...GTGATCATGGTAGGGGGAGCCCTGGTCCTCATGTTTCTGGGTCATTGTGCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441260.2
CDS-3UTR GCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGGCCATGAGGCCACCTaGAATGGTGTAGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIGHEAT*NGVDGS
Trigger: ACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGCCGAGAGAGACCGCTaGACAATGACCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLAERDR*TMTWSV
Trigger: CACAGACCAGGTCATTGTGCAGCGGTCTCTCTCGGC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TNTLPTTISSCSVDFLRKFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...CTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp TTCCTCAGGGATGGGAGTTGTACAGAGGCTGACAATGACAATGACGATGGCAGTGAAGTCCTTCAGCACTaGTGGCCTCCGGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: FLRDGSCTEADNDNDDGSEVLQH*WPPVHL
Trigger: GAGGTGGACCGGAGGCCAGCAGTGCTGAAGGACTTC...ACTGCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATCCCTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACCCGCAGAGGAGGATTaGAAAGTACAGGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIPAEED*KVQVVE
Trigger: TTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGA +
Preference number: 4 (lower is better)
Translates to: DQLRVGNVGTSHSGPTDSGNSRQ*SLDLHG
Trigger: TCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCC...AGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTTGTTGGCCACCAGCTCATaGACCTCCCGGCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QLRVGNVGTSHSGPTDSLLATSS*TSRPGN
Trigger: ATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAA...CAAAGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCCGTGTGACCTTGGATaGATCCCTCTGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSPCDLG*IPLSPP
Trigger: TGGAGGAGACAGAGGGATCCATCCAAGGTCACACGG...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGAAAGCATCGGGCCGTaGGAGGTGACAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIESIGP*EVTGGV
Trigger: AACACCACCTGTCACCTCCCACGGCCCGATGCTTTC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGGGTCCCGAAGAATGTaGAAAGCATCGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNGSRRM*KASGRG
Trigger: CCCACGGCCCGATGCTTTCCACATTCTTCGGGACCC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCCCGAAAATGAGACCTaGCCAAGGGATGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLPENET*PRDVPA
Trigger: AGCGGGGACATCCCTTGGCCAGGTCTCATTTTCGGG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGCCCCACAGATTCTTTaGCAGACATCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: RHEGHDQLRVGNVGTSHSAPQIL*QTSGST
Trigger: CGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGC...CGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGACATGTCTCCAGAGTaGCTCCTCCTCAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIDMSPE*LLLNAC
Trigger: ACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGAAGCACAGGCACAGTaGCTCCCAGGCTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIEAQAQ*LPGCLC
Trigger: GCACAAACAGCCTGGGAGCCACTGTGCCTGTGCTTC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCTATGGGAGCAGGAGTaGGAACTTGACCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSLWEQE*ELDPGL
Trigger: CAGACCTGGGTCAAGTTCCCACTCCTGCTCCCATAG...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 72 bp TGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTaGTCAGCTTCTGTTCTAGCGCAGCCTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CRHVSRVAPPQC*SASVLAQPSLL
Trigger: CAGCAGAGAAGGCTGCGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGTCTCCTCCAGACCTTaGTTTCCTCATGTTCCACTC +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQVSSRP*FPHVPL
Trigger: GAGTGGAACATGAGGAAATCAAGGTCTGGAGGAGAC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR TCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTTGTAGATCACGGCCATaGGGCCACCTGCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRICRSRP*GHLQWC
Trigger: ACACCATTGCAGGTGGCCTCATGGCCGTGATCTACA...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGTGTAGATCACGGCCATaGGGCCACCTGCAATGGTGT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLCRSRP*GHLQWC
Trigger: ACACCATTGCAGGTGGCCTCATGGCCGTGATCTACA...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCCTTCTGGGTGGTCCTaGACAAACCCAGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLPSGWS*TNPVLS
Trigger: AGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTCCAGGCCCCATTGCTaGCAGCTCCTTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: LMLQTCLQSGSSSMLVSFSRPHC*QLLAHL
Trigger: CAGATGAGCAAGGAGCTGGCAGCAATGGGGCCTGGA...GAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATAGCTCCAGGCCCCATTaGTGCCAGCTCCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNSSRPH*CQLLAH
Trigger: ATGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCT...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GCCAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTGTGACCACACCTGCTaGGATGTACACAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: ASKRTALMLQTCLQSGSSCDHTC*DVHRDE
Trigger: TTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACA...GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTGTGACCACACCTGCTaGGATGTACACAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: DQLRVGNVGTSHSGPTDSCDHTC*DVHRDE
Trigger: TTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACA...AGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp AGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGCATTGTGACCACACCTaGTGCGATGTACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: RHEGHDQLRVGNVGTSHSHCDHT*CDVHRD
Trigger: GTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATG...CGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HDQLRVGNVGTSHSGPTDFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...ATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATTCTTTGGCTCTGTTGACTTCCTaGGGAAGCGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: QLRVGNVGTSHSGPTDSLALLTS*GSAATH
Trigger: ATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGC...CAAAGAATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp ACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGCCCGCAGAGGAGGATTaGAAAGTACAGGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: TNTLPTTISSCSVDFLRKPAEED*KVQVVE
Trigger: TTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGG...CTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACAGGAGCAGCCAGGTTaGGTTCCACTCGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTQEQPG*VPLEAT
Trigger: GGTGGCTTCGAGTGGAACGCAACCTGGCTGCTCCTG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATCTCGACTTGCACGGATaGACGACCAGATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNLDLHG*TTRSPQ
Trigger: CTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAG...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGA +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLGNSRQ*SLDLHG
Trigger: TCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCAGAGATGCTCCAATTaGCCACCAGCTCATGGACCT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSQRCSN*PPAHGP
Trigger: AGGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTG...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TGTTCCTCAGGGATGGGAGTTGTACAGAGGCTGACAATGACAATGACGATGGCACCAGCAGGATCCCTGTaGAGAGGTACAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSGMGVVQRLTMTMTMAPAGSL*RGTGSS
Trigger: GCTGGAACCTGTACCTCTCCACAGGGATCCTGCTGG...TGCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATCCCTGAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCCATGAGACAGACTCTTaGCCGAGAGAGACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLHETDS*PRETAA
Trigger: TGCAGCGGTCTCTCTCGGCCAAGAGTCTGTCTCATG...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGAGACAGACTCTTaGCCGAGAGAGACCGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIHETDS*PRETAA
Trigger: TGCAGCGGTCTCTCTCGGCCAAGAGTCTGTCTCATG...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCGCACGGAGCCTCCCTTaGCATGAGACAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LMLQTCLQSGSSSMLVSFARSLP*HETDSW
Trigger: CCAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGC...GAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp ACTGAAGCCAGGTCTGTGGAATCACGCAAAATAGCCCCAGAGGAAGATGTTGATGCTTCAGGCTGCTCCTaGCCCAGGCTCGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TEARSVESRKIAPEEDVDASGCS*PRLEFS
Trigger: AGAGAACTCGAGCCTGGGCCAGGAGCAGCCTGAAGC...ATCAACATCTTCCTCTGGGGCTATTTTGCGTGATTCCACAGACCTGGCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATACTGTGGAGCCACCAATaGAAATATAGGACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PHPFGSDSHHCGATNGNILWSHQ*KYRTLL
Trigger: CAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAG...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCTATGGGAGCAGGAGTaGGAACTTGACCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRILWEQE*ELDPGL
Trigger: CAGACCTGGGTCAAGTTCCCACTCCTGCTCCCATAG...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAAGTCACTTGGGATATaGCCCTTGGTCCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLKSLGI*PLVLAP
Trigger: GGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 72 bp TGGGTACAAAGTCACTTGGGATATGGCCCTTGGTCCTaGCCCCCTGGAGTCTTCCATCTCAGTGTGATCAGT +
Preference number: 4 (lower is better)
Translates to: WVQSHLGYGPWS*PPGVFHLSVIS
Trigger: ACTGATCACACTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTTTGTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCCAATGCCATCTGGATaGAGAGGGCTCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLPMPSG*RGLQRR
Trigger: TCTTCTCTGGAGCCCTCTTCATCCAGATGGCATTGG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAAGCTCCGGGCTCTGTaGCCCTCTTGCAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGKLRAL*PSCRRW
Trigger: CCATCTTCTGCAAGAGGGTCACAGAGCCCGGAGCTT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCCCAGAGGAAGATGTTaGTGGCCAGCAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLPRGRC*WPAKGQ
Trigger: CTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTAACTCTGGAGTCCAGTaGTATGTGTGGAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSNSGVQ*YVWSCL
Trigger: GAGACAGCTCCACACATAGCACTGGACTCCAGAGTT...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AGGAACACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCAACTCTGGAGTCCAGTaGTATGTGTGGAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RNTTNTLPTTISSCSVDFNSGVQ*YVWSCL
Trigger: GAGACAGCTCCACACATAGCACTGGACTCCAGAGTT...GAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR GCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGTGTGACCACACCTGCTaGGATGTACACAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLCDHTC*DVHRDE
Trigger: TTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACA...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGGCCATGAGGCCACCTaGAATGGTGTAGACGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGGHEAT*NGVDGS
Trigger: ACTGCCGTCTACACCATTGCAGGTGGCCTCATGGCC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAGCTCTGTTGACTTCCTaGGGAAGCGCTGCCACACAT +
Preference number: 4 (lower is better)
Translates to: SKRTALMLQTCLQSGSSSALLTS*GSAATH
Trigger: ATGTGTGGCAGCGCTTCCGCAGGAAGTCAACAGAGC...TGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCGGATATCTCCGGTGTaGTCTCGTGGGCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGRISPV*SRGPPS
Trigger: AGAAGGAGGCCCACGAGAGCACACCGGAGATATCCG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGACTTTCCCCAGGACCTaGTTGGGGCTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGTFPRT*LGLQAA
Trigger: AGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGGTGGCTCCTCCTCAATaGTTGTCAGCTTCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQVAPPQ*LSASVL
Trigger: TAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCAC...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAATGGCCCTTGGTCCTTaGCCCCTGGAGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTMALGP*PLESSI
Trigger: GATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCAT...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACTCGACTTGCACGGATaGACGACCAGATCCCCACAG +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTLDLHG*TTRSPQ
Trigger: CTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTTGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGA +
Preference number: 4 (lower is better)
Translates to: CCRHVSRVAPPQCLSASVGNSRQ*SLDLHG
Trigger: TCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCC...AACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp CAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACACAGAGATGCTCCAATTaGCCACCAGCTCATGGACCT +
Preference number: 4 (lower is better)
Translates to: QTNRHEGHDQLRVGNVGTQRCSN*PPAHGP
Trigger: AGGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTG...TGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCCAGCAGGATCCCTGTaGAGAGGTACAGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGPAGSL*RGTGSS
Trigger: GCTGGAACCTGTACCTCTCCACAGGGATCCTGCTGG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATCGCTGCACAATGACCTaGTCTGTGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNRCTMT*SVHQHQ
Trigger: CTGGTGTTGGTGCACAGACCAGGTCATTGTGCAGCG...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGCACGGAGCCTCCCTTaGCATGAGACAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGARSLP*HETDSW
Trigger: CCAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GAGAACAAGTCTTCAAAGGTCAGGCTGAGGAGTCGTAGCTTAAAGAACAAAAACAGGGCACTCCCCGGCTaGCCTCTCGGATATCTCCGG +
Preference number: 4 (lower is better)
Translates to: ENKSSKVRLRSRSLKNKNRALPG*PLGYLR
Trigger: CCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCT...GTTTTTGTTCTTTAAGCTACGACTCCTCAGCCTGACCTTTGAAGACTTGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCTGTGGAGCCACCAATaGAAATATAGGACTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQLWSHQ*KYRTLL
Trigger: CAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCTTAAAGTCCACCCTTaGCTCCCCACCCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGLKVHP*LPTPSG
Trigger: ACCCGAAGGGGTGGGGAGCCAAGGGTGGACTTTAAG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAGCAGGTCAAGGCTATaGGAGCAGGAGTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLSRSRL*EQEWEL
Trigger: AAGTTCCCACTCCTGCTCCCATAGCCTTGACCTGCT...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTAGCAGGTCAAGGCTATaGGAGCAGGAGTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRISRSRL*EQEWEL
Trigger: AAGTTCCCACTCCTGCTCCCATAGCCTTGACCTGCT...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGATACTGCGGCATTGTaGCCACACCTGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTDTAAL*PHLLRC
Trigger: ACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GCCAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCGCAAAAGGACAGCATTaGTGTTGCAGACATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ASKRTALMLQTCLQSGSSAKGQH*CCRHVS
Trigger: GGAGACATGTCTGCAACATCAATGCTGTCCTTTTGC...GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTTCCCAGAGGAAGATGTTaGTGGCCAGCAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: CCRHVSRVAPPQCLSASVPRGRC*WPAKGQ
Trigger: CTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGG...AACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGCCTGTTTCTGTGGCTaGCAGGCTTGGGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNACFCG*QAWALF
Trigger: AAACAAAGCCCAAGCCTGTCAGCCACAGAAACAGGC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLVKCAG*VGFSSG
Trigger: CCCTGAAGAGAATCCAACTCAACCTGCACACTTGAC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTTGGAAACAGTGTGTTTaGGGTAGGTCTGTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSWKQCV*GRSVRQ
Trigger: TTGCCTTACAGACCTACCTCAAACACACTGTTTCCA...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGCGCTTCTTCAGATACTaGGGCATTGTGACCACACCT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLRFFRY*GIVTTP
Trigger: AGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCG...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATACACCACAAACACTCTaGCCACCACCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNTPQTL*PPPSAP
Trigger: AGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGT...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GCAGAGGAGGATTGCAAAGTACAGGTAGTGGAAGTCCTTCAGCACTGCTGGCCTGTGGCTCCTCCTCAATaGTTGTCAGCTTCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: AEEDCKVQVVEVLQHCWPVAPPQ*LSASVL
Trigger: TAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCAC...AGGCCAGCAGTGCTGAAGGACTTCCACTACCTGTACTTTGCAATCCTCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGGNSRQ*SLDLHG
Trigger: TCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCCCCACAGATTCTTTaGCAGACATCAGGGTCCACG +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTAPQIL*QTSGST
Trigger: CGTGGACCCTGATGTCTGCCAAAGAATCTGTGGGGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCGACATGTCTCCAGAGTaGCTCCTCCTCAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLDMSPE*LLLNAC
Trigger: ACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTC...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGGTGTGCAGGTTGAGTTaGATTCTCTTCAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLVCRLS*ILFRGA
Trigger: AGCTCCCCTGAAGAGAATCCAACTCAACCTGCACAC...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTTGGTCCTTGCCCCCTaGAGTCTTCCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNLVLAP*SLPSQC
Trigger: ACACTGAGATGGAAGACTCCAGGGGGCAAGGACCAA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTTGAGCTGAAACACACCTaGGCCCTGTCCTCATGGATT +
Preference number: 4 (lower is better)
Translates to: CCRHVSRVAPPQCLSASVELKHT*ALSSWI
Trigger: AATCCATGAGGACAGGGCCCAGGTGTGTTTCAGCTC...AACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532322.5
3UTR CAA 72 bp CAGAGGAAGATGTTGATGGCCAGCAAAAGGACAGCATaGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRKMLMASKRTA*MLQTCLQSGSS
Trigger: GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGCCATCAACATCTTCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCGCAAAAGGACAGCATTaGTGTTGCAGACATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSAKGQH*CCRHVS
Trigger: GGAGACATGTCTGCAACATCAATGCTGTCCTTTTGC...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR TCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCCCAGAGGAAGATGTTaGTGGCCAGCAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGPRGRC*WPAKGQ
Trigger: CTGTCCTTTTGCTGGCCATCAACATCTTCCTCTGGG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNVKCAG*VGFSSG
Trigger: CCCTGAAGAGAATCCAACTCAACCTGCACACTTGAC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTTTGCTGCCAGCTCCTTaGTCATCTGTTAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRILLPAP*SSVSVG
Trigger: ACCAACACTAACAGATGAGCAAGGAGCTGGCAGCAA...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTGCTGCCAGCTCCTTaGTCATCTGTTAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSLLPAP*SSVSVG
Trigger: ACCAACACTAACAGATGAGCAAGGAGCTGGCAGCAA...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAAATGGTCCCTCGACTTaGACGGATGGACGACCAGAT +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTNGPST*TDGRPD
Trigger: ATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATT...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCATTGTGACCACACCTaGTGCGATGTACACAGGGAC +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGHCDHT*CDVHRD
Trigger: GTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCCGCTTCTTCAGATACTaGGGCATTGTGACCACACCT +
Preference number: 4 (lower is better)
Translates to: LMLQTCLQSGSSSMLVSFRFFRY*GIVTTP
Trigger: AGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCG...GAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR GCA 90 bp TTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCCCCGCAGAGGAGGATTaGAAAGTACAGGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LMLQTCLQSGSSSMLVSFPAEED*KVQVVE
Trigger: TTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGG...GAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR GCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTCAGGCTCGAGTTCTCTaGCGCTCCACCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIQARVL*RSTSCR
Trigger: CCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTG...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCCAGGCTGTTTGTGCTaGCCGCTGTGGGGCTTACCC +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEPGCLC*PLWGLP
Trigger: GGGTAAGCCCCACAGCGGGCAGCACAAACAGCCTGG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACGTGCAGACCAACTCTaGAGTCCAGTGCTATGTGTG +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTRADQL*SPVLCV
Trigger: CACACATAGCACTGGACTCCAGAGTTGGTCTGCACG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACACAGAGATGCTCCAATTaGCCACCAGCTCATGGACCT +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTQRCSN*PPAHGP
Trigger: AGGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTG...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCTTCTGTTGACATGTCTCCAGAGTaGCTCCTCCTCAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: CCRHVSRVAPPQCLSASVDMSPE*LLLNAC
Trigger: ACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTC...AACAGAAGCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTGAAGGGACACTTAACTaGGGTCACAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSEGTLN*GHSVFQ
Trigger: TTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTC...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGTTGGTCCTTGCCCCCTaGAGTCTTCCATCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGLVLAP*SLPSQC
Trigger: ACACTGAGATGGAAGACTCCAGGGGGCAAGGACCAA...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGGGTACAAAGTCACTTaGGATATGGCCCTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNGYKVT*DMALGP
Trigger: AGGACCAAGGGCCATATCCCAAGTGACTTTGTACCC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTTGCTGCCAGCTCCTTaGTCATCTGTTAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNLLPAP*SSVSVG
Trigger: ACCAACACTAACAGATGAGCAAGGAGCTGGCAGCAA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAACTCTGGAGTCCAGTaGTATGTGTGGAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGNSGVQ*YVWSCL
Trigger: GAGACAGCTCCACACATAGCACTGGACTCCAGAGTT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGCCCGCAGAGGAGGATTaGAAAGTACAGGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGPAEED*KVQVVE
Trigger: TTCCACTACCTGTACTTTGCAATCCTCCTCTGCGGG...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATGTGGCTCCTCCTCAATaGTTGTCAGCTTCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNVAPPQ*LSASVL
Trigger: TAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCAC...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp AGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAGTGGCTCCTCCTCAATaGTTGTCAGCTTCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: SKRTALMLQTCLQSGSSSVAPPQ*LSASVL
Trigger: TAGAACAGAAGCTGACAAGCATTGAGGAGGAGCCAC...TGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR GCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTGCCATAGAGAGTTTGTaGATATTTGGGTTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSAIESL*IFGLES
Trigger: ACTCTCTAACCCAAATATGCACAAACTCTCTATGGC...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGCAGCCCACCTCGTCTaGGAACAGGGCCCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRAAHLV*EQGPAD
Trigger: ATCAGCCGGGCCCTGTTCCCAGACGAGGTGGGCTGC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATAGGTATGCGGATTCATaGCAAGCAAAGGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNRYADS*QAKGEG
Trigger: TCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCT...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGACAGCTGTTATTTTCTaGGTACAAAGTCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQTAVIF*VQSHLG
Trigger: TCCCAAGTGACTTTGTACCCAGAAAATAACAGCTGT...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
3UTR CAA 72 bp AAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTCCACTaGTCAAGTGTGCAGGTTGAGTTGGATTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KPSALSGLLFLH*SSVQVELDSLQ
Trigger: CTGAAGAGAATCCAACTCAACCTGCACACTTGACAAGTGGAGAAACAGAAGCCCAGAGAGAGCACTGGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTTCCAGGCCCCATTGCTaGCAGCTCCTTGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEISRPHC*QLLAHL
Trigger: CAGATGAGCAAGGAGCTGGCAGCAATGGGGCCTGGA...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACATACCATCTGTCACCATaGTTAAAGTCCACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTYHLSP*LKSTLG
Trigger: GCCAAGGGTGGACTTTAAGCATGGTGACAGATGGTA...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACATCTCAGTGTGATCAGTaGTGTGACAGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTSQCDQ*CDRSRS
Trigger: TGACCTGCTTCTGTCACAGCACTGATCACACTGAGA...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCCCGAAAATGAGACCTaGCCAAGGGATGTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEPENET*PRDVPA
Trigger: AGCGGGGACATCCCTTGGCCAGGTCTCATTTTCGGG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGGCACGGAGCCTCCCTTaGCATGAGACAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEARSLP*HETDSW
Trigger: CCAAGAGTCTGTCTCATGCCAAGGGAGGCTCCGTGC...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCCCTCTTGCAGAAGATaGCCAGCAGGAAGAGAGCGG +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEPSCRR*PAGRER
Trigger: CCGCTCTCTTCCTGCTGGCCATCTTCTGCAAGAGGG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGATACTGCGGCATTGTaGCCACACCTGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIDTAAL*PHLLRC
Trigger: ACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp CTGAGGAGTCGTAGCTTAAAGAACAAAAACCCTGTAGGCAATGGAGAGTCACTGAAAGTTCTCTTGGAGTaGATTGAAAGGGGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRSRSLKNKNPVGNGESLKVLLE*IERGPA
Trigger: GGCTGGACCCCTTTCAATTCACTCCAAGAGAACTTT...CAGTGACTCTCCATTGCCTACAGGGTTTTTGTTCTTTAAGCTACGACTCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGGGTCCCGAAGAATGTaGAAAGCATCGGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRGSRRM*KASGRG
Trigger: CCCACGGCCCGATGCTTTCCACATTCTTCGGGACCC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp AAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAACAAACCCAGTAATATAGGACTCTCCTaGGTAAATTCATGCAACAAA +
Preference number: 4 (lower is better)
Translates to: KSGETPCDTFWVVLNKPSNIGLS*VNSCNK
Trigger: TTTGTTGCATGAATTTACCCAGGAGAGTCCTATATT...ACTGGGTTTGTTCAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGAAGGGACACTTAACTaGGGTCACAGTGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTEGTLN*GHSVFQ
Trigger: TTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTAAGTCACTTGGGATATaGCCCTTGGTCCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIKSLGI*PLVLAP
Trigger: GGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCCAATGCCATCTGGATaGAGAGGGCTCCAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEPMPSG*RGLQRR
Trigger: TCTTCTCTGGAGCCCTCTTCATCCAGATGGCATTGG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGAAAGCCCAGAAACATaGGGACCAGGGCTCCCCCTA +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRESPET*GPGLPL
Trigger: TAGGGGGAGCCCTGGTCCTCATGTTTCTGGGCTTTC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GAGAACAAGTCTTCAAAGGTCAGGCTGAGGAGTCGTAGCTTAAAGAACAAAAACGTCAAGTGTGCAGGTTaGGTTGGATTCTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ENKSSKVRLRSRSLKNKNVKCAG*VGFSSG
Trigger: CCCTGAAGAGAATCCAACTCAACCTGCACACTTGAC...GTTTTTGTTCTTTAAGCTACGACTCCTCAGCCTGACCTTTGAAGACTTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR GCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGCTGGACATCAGAGATaGTCCAATTGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIAGHQR*SNWPPA
Trigger: AGCTGGTGGCCAATTGGAGCATCTCTGATGTCCAGC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAACATTAGGGATGGCCTaGCTGTACCGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRTLGMA*LYRCSR
Trigger: CCTGGAGCAGCGGTACAGGCAGGCCATCCCTAATGT...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGTTCCTGCGGAAGCGCTaGCACACATCAATGGTGAAC +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEFLRKR*HTSMVN
Trigger: GTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAA...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGACACCACAAACACTCTaGCCACCACCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFETPQTL*PPPSAP
Trigger: AGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGTGT...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAACTTTCCCCAGGACCTaGTTGGGGCTTCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRTFPRT*LGLQAA
Trigger: AGCAGCCTGAAGCCCCAAGCAGGTCCTGGGGAAAGT...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTTCCTGGGTAAATTCATaGAACAAAGAGATTATTGGT +
Preference number: 4 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSSWVNS*NKEIIG
Trigger: ACCAATAATCTCTTTGTTGCATGAATTTACCCAGGA...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAATGGCCCTTGGTCCTTaGCCCCTGGAGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRMALGP*PLESSI
Trigger: GATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCAT...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCGTGCAGACCAACTCTaGAGTCCAGTGCTATGTGTG +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFERADQL*SPVLCV
Trigger: CACACATAGCACTGGACTCCAGAGTTGGTCTGCACG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGAAAGCATCGGGCCGTaGGAGGTGACAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRESIGP*EVTGGV
Trigger: AACACCACCTGTCACCTCCCACGGCCCGATGCTTTC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATACAGCTGTTATTTTCTaGGTACAAAGTCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNTAVIF*VQSHLG
Trigger: TCCCAAGTGACTTTGTACCCAGAAAATAACAGCTGT...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCGCTTCTTCAGATACTaGGGCATTGTGACCACACCT +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFERFFRY*GIVTTP
Trigger: AGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGTGTCTAAGAGCTTTCTaGCCAAAATACCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGCLRAF*PKYHLS
Trigger: TGACAGATGGTATTTTGGGCAGAAAGCTCTTAGACA...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGACGCTGCACAATGACCTaGTCTGTGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRRCTMT*SVHQHQ
Trigger: CTGGTGTTGGTGCACAGACCAGGTCATTGTGCAGCG...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGACATGTCTCCAGAGTaGCTCCTCCTCAATGCTTGT +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIDMSPE*LLLNAC
Trigger: ACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGCAAAAGGACAGCATTaGTGTTGCAGACATGTCTCC +
Preference number: 4 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIAKGQH*CCRHVS
Trigger: GGAGACATGTCTGCAACATCAATGCTGTCCTTTTGC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGCTGGACATCAGAGATaGTCCAATTGGCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRAGHQR*SNWPPA
Trigger: AGCTGGTGGCCAATTGGAGCATCTCTGATGTCCAGC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAAGCCACTGCCCACATTaGTGGACATCAGAGATGCTC +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRSHCPH*WTSEML
Trigger: GAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCT...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGAGCAAAGGTGCTCTTaGATTTTTGCAAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGEQRCS*IFANFF
Trigger: GAAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGAGCAAAGGTGCTCTTaGATTTTTGCAAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTEQRCS*IFANFF
Trigger: GAAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGAGGTATGCGGATTCATaGCAAGCAAAGGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFERYADS*QAKGEG
Trigger: TCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCT...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGTCCTGGGTAAATTCATaGAACAAAGAGATTATTGGT +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGSWVNS*NKEIIG
Trigger: ACCAATAATCTCTTTGTTGCATGAATTTACCCAGGA...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CCA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAATATAGGACTCTCCTaGGTAAATTCATGCAACAAA +
Preference number: 4 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGNIGLS*VNSCNK
Trigger: TTTGTTGCATGAATTTACCCAGGAGAGTCCTATATT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR TCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGCAAAAGGACAGCATTaGTGTTGCAGACATGTCTCC +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRAKGQH*CCRHVS
Trigger: GGAGACATGTCTGCAACATCAATGCTGTCCTTTTGC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGATACCATCTGTCACCATaGTTAAAGTCCACCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRYHLSP*LKSTLG
Trigger: GCCAAGGGTGGACTTTAAGCATGGTGACAGATGGTA...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGATCTCAGTGTGATCAGTaGTGTGACAGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRSQCDQ*CDRSRS
Trigger: TGACCTGCTTCTGTCACAGCACTGATCACACTGAGA...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGGCCATAGAGAGTTTGTaGATATTTGGGTTAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEAIESL*IFGLES
Trigger: ACTCTCTAACCCAAATATGCACAAACTCTCTATGGC...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR GCA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGTGTATTCCAAGGTATaGGGATTCATGGCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRVYSKV*GFMASK
Trigger: TTTGCTTGCCATGAATCCGCATACCTTGGAATACAC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TGCAGGGCACTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCTCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: CRALPGWPLGYLRCALVGSAPAL*TSCGSA
Trigger: AGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGA...GCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAGTGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp ACGCAGAAGCCCCACTCCCAGGCCAAACACGAGGCCCCAGAAAGCTCCGGGCTCTCAGAGATGCTCCAATaGGCCACCAGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: TQKPHSQAKHEAPESSGLSEMLQ*ATSSWT
Trigger: GGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGA...GAGCCCGGAGCTTTCTGGGGCCTCGTGTTTGGCCTGGGAGTGGGGCTTCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp CTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCGCCCGCAGAGGAGGATaGCAAAGTACAGGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: LPGWPLGYLRCALVGLLLARRGG*QSTGSG
Trigger: TCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGC...GAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS GCA 90 bp CTGGATGTAGACAGAGGGGCGGCTTCCCACCCAGAGGCAGTGCTGTaGTGTGGGAGGCCCCCGAACAGAGAAATAAGAGACCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: LDVDRGAASHPEAVL*CGRPPNREIRDLGP
Trigger: AGGTCCCAGGTCTCTTATTTCTCTGTTCGGGGGCCTCCCACAGCACAGCACTGCCTCTGGGTGGGAAGCCGCCCCTCTGTCTACATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493837.6
ENST00000527929.1
CDS CCA 90 bp TTGGCCACCAGCTCATGGACCTCCCGGCCAGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGATGGACGACCAGATCCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: LATSSWTSRPGNSRQ*SLDLHGWTTRSPQQ
Trigger: TTGCTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS-3UTR CAA 90 bp GGGCAGTTCCGAGTCCACCATGTGAGGCGTGTGAGCTGTTCCTCAGGGATGGGAGGCTCTGTGACCCTCTaGCAGAAGATGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GQFRVHHVRRVSCSSGMGGSVTL*QKMASR
Trigger: CCTGCTGGCCATCTTCTGCAAGAGGGTCACAGAGCC...TCCCATCCCTGAGGAACAGCTCACACGCCTCACATGGTGGACTCGGAACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTGGCTCCCAGGCTGTTaGTGCTGCCCGCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQWLPGC*CCPLWG
Trigger: GCCCCACAGCGGGCAGCACAAACAGCCTGGGAGCCA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GCTGCTCCTGGCCCAGGCTCGAGTTCTCTGCCGCTCCACCTCCTGCAGGGCACTTTCTCTTGGAGTGAATaGAAAGGGGTCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: AAPGPGSSSLPLHLLQGTFSWSE*KGVQPG
Trigger: TCCAGGCTGGACCCCTTTCAATTCACTCCAAGAGAA...AGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS TCA 90 bp GTGCTGTGGGAGGCCCCCGAACAGAGAAATAAGAGACCTGGGACCTaGCCCCAGTCCTCCCGTGTGACCTTGGATGGATCCCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: VLWEAPEQRNKRPGT*PQSSRVTLDGSLCL
Trigger: GAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGTCAGGTCCCAGGTCTCTTATTTCTCTGTTCGGGGGCCTCCCACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493837.6
ENST00000527929.1
CDS CCA 90 bp GCACCAACACCAGGTGGCCAGCACTGTGAGCCCGAAAATGAGACCTaGCCAAGGGATGTCCCCGCTCACAGGGTCCCGAAGAATGTGGAA +
Preference number: 5 (lower is better)
Translates to: APTPGGQHCEPENET*PRDVPAHRVPKNVE
Trigger: TTCCACATTCTTCGGGACCCTGTGAGCGGGGACATCCCTTGGCCAGGTCTCATTTTCGGGCTCACAGTGCTGGCCACCTGGTGTTGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236495.9
ENST00000438567.7
ENST00000493837.6
ENST00000533824.5
CDS TCA 90 bp GGGGGTGAAGGAGGAAGATGGGGCTTGGGCTCAAGACCCTTGGTTTaGAGTAGCGAGAACCCTGCTCTTTGGGAGCTGCAGCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GGEGGRWGLGSRPLV*SSENPALWELQPGE
Trigger: CTCTCCAGGCTGCAGCTCCCAAAGAGCAGGGTTCTCGCTACTTCAAACCAAGGGTCTTGAGCCCAAGCCCCATCTTCCTCCTTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS GCA 90 bp GCCCCCAAATCGCTTCTTCAGATACTGCGGCATTGTGACCACACCTaGTGCGATGTACACAGGGACGAAGACCCAGCCAAGGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: APKSLLQILRHCDHT*CDVHRDEDPAKGQE
Trigger: CTCCTGGCCCTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS-3UTR CAA 90 bp CTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCAGGACAGCATTGATGTaGCAGACATGTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LPGWPLGYLRCALVGLLLRTALM*QTCLQS
Trigger: ACTCTGGAGACATGTCTGCAACATCAATGCTGTCCT...GAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CAA 90 bp GCTGCTCCTGGCCCAGGCTCGAGTTCTCTGCCGCTCCACCTCCTGCAGGGCACTAGCAAAAGGACAGCATaGATGTTGCAGACATGTCTC +
Preference number: 5 (lower is better)
Translates to: AAPGPGSSSLPLHLLQGTSKRTA*MLQTCL
Trigger: GAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT...AGTGCCCTGCAGGAGGTGGAGCGGCAGAGAACTCGAGCCTGGGCCAGGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS GCA 90 bp CCCAAATCGCTTCTTCAGATACTGCGGCATTGTGACCACACCTGCTaGGATGTACACAGGGACGAAGACCCAGCCAAGGGCCAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: PKSLLQILRHCDHTC*DVHRDEDPAKGQEQ
Trigger: CTGCTCCTGGCCCTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCGATTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS CCA 90 bp GGATTGGGGGTGAAGGAGGAAGATGGGGCTTGGGCTCAAGACCCTTaGTTTGAAGTAGCGAGAACCCTGCTCTTTGGGAGCTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GLGVKEEDGAWAQDP*FEVARTLLFGSCSL
Trigger: CAGGCTGCAGCTCCCAAAGAGCAGGGTTCTCGCTACTTCAAACCAAGGGTCTTGAGCCCAAGCCCCATCTTCCTCCTTCACCCCCAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS-3UTR CAA 90 bp GACTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGTGCTGCTGCTGTCAGAGATGCTCCAATaGGCCACCAGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: DFLRKRCHTSMVNRVLLLSEMLQ*ATSSWT
Trigger: GGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGA...CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CAA 90 bp CTCCCCGGCTGGCCTCTCGGATATCTCCGGTGTGCTCTCGTGGGCCTCCTTCTCAGCAAAAGGACAGCATaGATGTTGCAGACATGTCTC +
Preference number: 5 (lower is better)
Translates to: LPGWPLGYLRCALVGLLLSKRTA*MLQTCL
Trigger: GAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT...GAGAAGGAGGCCCACGAGAGCACACCGGAGATATCCGAGAGGCCAGCCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CAA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATATATGGCCCTTGGTCCTaGCCCCCTGGAGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIYGPWS*PPGVFH
Trigger: ATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATA...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GACTTCCTGCGGAAGCGCTGCCACACATCAATGGTGAACAGGGTGCTGCTGCTGGCTCATCTGTTAGTGTaGGTCAACAGCAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: DFLRKRCHTSMVNRVLLLAHLLV*VNSRLD
Trigger: GTCCAGCCTGCTGTTGACCAACACTAACAGATGAGC...CAGCAGCAGCACCCTGTTCACCATTGATGTGTGGCAGCGCTTCCGCAGGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp ACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGCAATGGTCCCTCGACTaGCACGGATGGACGACCAGA +
Preference number: 5 (lower is better)
Translates to: TNTLPTTISSCSVDFLRKQWSLD*HGWTTR
Trigger: TCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTG...CTTCCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CAA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTGGCTCTGTGACCCTCTaGCAGAAGATGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSGSVTL*QKMASR
Trigger: CCTGCTGGCCATCTTCTGCAAGAGGGTCACAGAGCC...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGCCCGCAGAGGAGGATaGCAAAGTACAGGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIARRGG*QSTGSG
Trigger: TCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS CCA 90 bp CCTGCTCTTTGGGAGCTGCAGCCTGGAGAGGGGACATGGCTCACATaGCTCTATGCACTGGAAAGTTTCAATCGAACTGTGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PALWELQPGEGTWLT*LYALESFNRTVEVA
Trigger: TGCCACCTCCACAGTTCGATTGAAACTTTCCAGTGCATAGAGCCATGTGAGCCATGTCCCCTCTCCAGGCTGCAGCTCCCAAAGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS-3UTR CAA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGAAGCTCCAGGCCCCATaGCTGCCAGCTCCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLKLQAP*LPAPCS
Trigger: TGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCTT...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CTGTTCCTCAGGGATGGGAGTTGTACAGAGGCTGACAATGACAATGACGATGGCAAGCTCCAGGCCCCATaGCTGCCAGCTCCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LFLRDGSCTEADNDNDDGKLQAP*LPAPCS
Trigger: TGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCTT...GCCATCGTCATTGTCATTGTCAGCCTCTGTACAACTCCCATCCCTGAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp CATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGGGCCCCACAGATCAATGGTCCCTCGACTaGCACGGATGGACGACCAGA +
Preference number: 5 (lower is better)
Translates to: HDQLRVGNVGTSHSGPTDQWSLD*HGWTTR
Trigger: TCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTG...ATCTGTGGGGCCCGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CAA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGTCAGAGATGCTCCAATaGGCCACCAGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQSEMLQ*ATSSWT
Trigger: GGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGA...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp ACCACAAACACTCTGCCCACCACCATCAGCTCCTGCTCTGTTGACTTCCTGCGGAAGCCACTGCCCACATaGCTGGACATCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: TTNTLPTTISSCSVDFLRKPLPT*LDIRDA
Trigger: AGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTT...CCGCAGGAAGTCAACAGAGCAGGAGCTGATGGTGGTGGGCAGAGTGTTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CAA 90 bp AGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACATCCCACTCGTCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: RHEGHDQLRVGNVGTSHSSAPAL*TSCGSA
Trigger: AGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGA...CGAGTGGGATGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000441260.2
CDS-3UTR CAA 90 bp CACCTTCTGGGTGGTCCTGAACAAACCCAGTGCTCTCTCTGGGCTTCTGTTTCTAGCAGGAGTGGGAACTaGACCCAGGTCTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: HLLGGPEQTQCSLWASVSSRSGN*TQVWTL
Trigger: CAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGCT...AGAAACAGAAGCCCAGAGAGAGCACTGGGTTTGTTCAGGACCACCCAGAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CAATATATCAGAAAGAGTGGGGAAACCCCGTGTGACACCTTCTGGGTGGTCCTGTATGGCCCTTGGTCCTaGCCCCCTGGAGTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: QYIRKSGETPCDTFWVVLYGPWS*PPGVFH
Trigger: ATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATA...CAGGACCACCCAGAAGGTGTCACACGGGGTTTCCCCACTCTTTCTGATATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNSAPAL*TSCGSA
Trigger: AGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GCCAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCGCTCCTCCTCAATGCTaGTCAGCTTCTGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: ASKRTALMLQTCLQSGSSAPPQC*SASVLA
Trigger: CGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGC...GGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425816.5
ENST00000532322.5
CDS-3UTR CAA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATATGTCAAGTGTGCAGGTaGAGTTGGATTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PHPFGSDSHHCGATNGNICQVCR*SWILFR
Trigger: CCTGAAGAGAATCCAACTCAACCTGCACACTTGACA...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAGCTTTGGATAGTCCATaGTCTAAGAGCTTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PHPFGSDSHHCGATNGNIALDSP*SKSFLP
Trigger: GGGCAGAAAGCTCTTAGACAATGGACTATCCAAAGC...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCAGAGATGCTCCAATaGGCCACCAGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNSEMLQ*ATSSWT
Trigger: GGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGA...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCAATGCTTGTCAGCAAGCCACTGCCCACATaGCTGGACATCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: ALMLQTCLQSGSSSMLVSKPLPT*LDIRDA
Trigger: AGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTT...GCTGACAAGCATTGAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTAAGCCACTGCCCACATaGCTGGACATCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIKPLPT*LDIRDA
Trigger: AGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTT...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGTCAGCTCCTGCTCTGTaGACTTCCTGCGGAAGCGCT +
Preference number: 5 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGSAPAL*TSCGSA
Trigger: AGCGCTTCCGCAGGAAGTCAACAGAGCAGGAGCTGA...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTGCTCCTCCTCAATGCTaGTCAGCTTCTGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIAPPQC*SASVLA
Trigger: CGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGC...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CAGACCAACAGGCATGAGGGCCATGACCAACTTAGGGTAGGCAATGTTGGAACAGCTCCTCCTCAATGCTaGTCAGCTTCTGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: QTNRHEGHDQLRVGNVGTAPPQC*SASVLA
Trigger: CGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGC...TGTTCCAACATTGCCTACCCTAAGTTGGTCATGGCCCTCATGCCTGTTGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425816.5
CDS-3UTR CAA 90 bp CCCCACCCCTTCGGGTCTGACAGCCACCACTGTGGAGCCACCAATGGAAATATAAGCAAAAGGACAGCATaGATGTTGCAGACATGTCTC +
Preference number: 5 (lower is better)
Translates to: PHPFGSDSHHCGATNGNISKRTA*MLQTCL
Trigger: GAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT...TATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTCAGACCCGAAGGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp AAGTCACTTGGGATATGGCCCTTGGTCCTTGCCCCCTGGAGTCTTCCATCTCAGCTTCTGTTTCTCCACTaGTCAAGTGTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: KSLGIWPLVLAPWSLPSQLLFLH*SSVQVE
Trigger: CTCAACCTGCACACTTGACAAGTGGAGAAACAGAAG...CTGAGATGGAAGACTCCAGGGGGCAAGGACCAAGGGCCATATCCCAAGTGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGTGGCTCCCAGGCTGTTaGTGCTGCCCGCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEWLPGC*CCPLWG
Trigger: GCCCCACAGCGGGCAGCACAAACAGCCTGGGAGCCA...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCCCGCAGAGGAGGATaGCAAAGTACAGGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTARRGG*QSTGSG
Trigger: TCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS TCA 90 bp CACGAGGCCCCAGAAAGCTCCATTATTTTTGTGGAGTGGTGTCCATaGTATCCCTCAGCTTCTCAAGGTACAGCCAGCCTGTCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: HEAPESSIIFVEWCP*YPSASQGTASLSLL
Trigger: TAGAAGAGACAGGCTGGCTGTACCTTGAGAAGCTGAGGGATATCATGGACACCACTCCACAAAAATAATGGAGCTTTCTGGGGCCTCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525901.1
CDS-3UTR CAA 90 bp CTGAGGAGTCGTAGCTTAAAGAACAAAAACCCTGTAGGCAATGGAGAGTCACTGGCCCGCAGAGGAGGATaGCAAAGTACAGGTAGTGGA +
Preference number: 5 (lower is better)
Translates to: LRSRSLKNKNPVGNGESLARRGG*QSTGSG
Trigger: TCCACTACCTGTACTTTGCAATCCTCCTCTGCGGGC...CAGTGACTCTCCATTGCCTACAGGGTTTTTGTTCTTTAAGCTACGACTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCTCCTCCTCAATGCTaGTCAGCTTCTGTTCTAGCG +
Preference number: 5 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTAPPQC*SASVLA
Trigger: CGCTAGAACAGAAGCTGACAAGCATTGAGGAGGAGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CCTGGCGAAGGGACACTTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTAGGACAGCATTGATGTaGCAGACATGTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: PGEGTLNWGHSVFQGMRIRTALM*QTCLQS
Trigger: ACTCTGGAGACATGTCTGCAACATCAATGCTGTCCT...AATCCGCATACCTTGGAATACACTGTGACCCCAGTTAAGTGTCCCTTCGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp CAGCAAAAGGACAGCATTGATGTTGCAGACATGTCTCCAGAGTGGCTCCTCCTCTGTCAAGTGTGCAGGTaGAGTTGGATTCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QQKDSIDVADMSPEWLLLCQVCR*SWILFR
Trigger: CCTGAAGAGAATCCAACTCAACCTGCACACTTGACA...GAGGAGGAGCCACTCTGGAGACATGTCTGCAACATCAATGCTGTCCTTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CAA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGAAGCTCCAGGCCCCATaGCTGCCAGCTCCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEKLQAP*LPAPCS
Trigger: TGAGCAAGGAGCTGGCAGCAATGGGGCCTGGAGCTT...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGGGCTCTGTGACCCTCTaGCAGAAGATGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEGSVTL*QKMASR
Trigger: CCTGCTGGCCATCTTCTGCAAGAGGGTCACAGAGCC...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TCAGTAAAGGCTACTGAATACATTCAAGAAGAGGGTGGAAACAGTGTGTTTGAGCAATGGTCCCTCGACTaGCACGGATGGACGACCAGA +
Preference number: 5 (lower is better)
Translates to: SVKATEYIQEEGGNSVFEQWSLD*HGWTTR
Trigger: TCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTG...CTCAAACACACTGTTTCCACCCTCTTCTTGAATGTATTCAGTAGCCTTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTCAATGGTCCCTCGACTaGCACGGATGGACGACCAGA +
Preference number: 5 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIQWSLD*HGWTTR
Trigger: TCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTG...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGGACAGCATTGATGTaGCAGACATGTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGRTALM*QTCLQS
Trigger: ACTCTGGAGACATGTCTGCAACATCAATGCTGTCCT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GACAGCCACCACTGTGGAGCCACCAATGGAAATATAGGACTCTCCTGGGTAAATAGCAAAAGGACAGCATaGATGTTGCAGACATGTCTC +
Preference number: 5 (lower is better)
Translates to: DSHHCGATNGNIGLSWVNSKRTA*MLQTCL
Trigger: GAGACATGTCTGCAACATCAATGCTGTCCTTTTGCT...ATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGCTCCACAGTGGTGGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAGCTTTGGATAGTCCATaGTCTAAGAGCTTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTALDSP*SKSFLP
Trigger: GGGCAGAAAGCTCTTAGACAATGGACTATCCAAAGC...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS CCA 90 bp TCACATGGCTCTATGCACTGGAAAGTTTCAATCGAACTGTGGAGGTaGCAGAGACAGGACAGAGAGGAATTTAAGAATGACAGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: SHGSMHWKVSIELWR*QRQDREEFKNDSGV
Trigger: TACCCCACTGTCATTCTTAAATTCCTCTCTGTCCTGTCTCTGCCACCTCCACAGTTCGATTGAAACTTTCCAGTGCATAGAGCCATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGGTGCTCTTGGATTTTaGCAAATTTCTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGGALGF*QISSCS
Trigger: GGAGCAGGAAGAAATTTGCAAAAATCCAAGAGCACC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGCTCATCTGTTAGTGTaGGTCAACAGCAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIAHLLV*VNSRLD
Trigger: GTCCAGCCTGCTGTTGACCAACACTAACAGATGAGC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000236495.9
CDS-3UTR CAA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTAAGCCACTGCCCACATaGCTGGACATCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIKPLPT*LDIRDA
Trigger: AGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTT...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAGAAGGACAAAGGCCATAGAGAGTTaGTGCATATTTGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: VTVYSKVCGFMASKGRRTKAIES*CIFGLE
Trigger: CTCTAACCCAAATATGCACAAACTCTCTATGGCCTT...TGTCCTTCTCCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGAAGGCCATAGAGAGTTaGTGCATATTTGGGTTAGAG +
Preference number: 5 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGKAIES*CIFGLE
Trigger: CTCTAACCCAAATATGCACAAACTCTCTATGGCCTT...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAAGCAGGAGTGGGAACTaGACCCAGGTCTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRSRSGN*TQVWTL
Trigger: CAACGTCCAGACCTGGGTCAAGTTCCCACTCCTGCT...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp GAGAACAAGTCTTCAAAGGTCAGGCTGAGGAGTCGTAGCTTAAAGAACAAAAACAGGACAGCATTGATGTaGCAGACATGTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: ENKSSKVRLRSRSLKNKNRTALM*QTCLQS
Trigger: ACTCTGGAGACATGTCTGCAACATCAATGCTGTCCT...GTTTTTGTTCTTTAAGCTACGACTCCTCAGCCTGACCTTTGAAGACTTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532322.5
CDS-3UTR CAA 90 bp TTAACTGGGGTCACAGTGTATTCCAAGGTATGCGGATTCATGGCAAGCAAAGGGGGAGCAAAGGTGCTCTaGGATTTTTGCAAATTTCTT +
Preference number: 5 (lower is better)
Translates to: LTGVTVYSKVCGFMASKGGAKVL*DFCKFL
Trigger: AAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTCC...CCCTTTGCTTGCCATGAATCCGCATACCTTGGAATACACTGTGACCCCAGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS TCA 90 bp ATAGACTGTAAGTGCCAGGATCTTCAAAGTTCTCTTGGAGTGAATTaGAAGGGGTCCAGCCTGGAGGATGTTGTAAAAGTGAAGCCAAAA +
Preference number: 5 (lower is better)
Translates to: IDCKCQDLQSSLGVN*KGSSLEDVVKVKPK
Trigger: TTTTGGCTTCACTTTTACAACATCCTCCAGGCTGGACCCCTTTCAATTCACTCCAAGAGAACTTTGAAGATCCTGGCACTTACAGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471020.1
ENST00000532322.5
CDS-3UTR CAA 90 bp GCCACCAATGGAAATATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTGGTGCTCTTGGATTTTaGCAAATTTCTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ATNGNIGLSWVNSCNKEIGALGF*QISSCS
Trigger: GGAGCAGGAAGAAATTTGCAAAAATCCAAGAGCACC...AATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTATATTTCCATTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS-3UTR CAA 90 bp ATAGGACTCTCCTGGGTAAATTCATGCAACAAAGAGATTATTGGTGAGAATAGAGGAGCAAAGGTGCTCTaGGATTTTTGCAAATTTCTT +
Preference number: 5 (lower is better)
Translates to: IGLSWVNSCNKEIIGENRGAKVL*DFCKFL
Trigger: AAGAAATTTGCAAAAATCCAAGAGCACCTTTGCTCC...TCTATTCTCACCAATAATCTCTTTGTTGCATGAATTTACCCAGGAGAGTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000438567.7
CDS TCA 72 bp CAAGGCCTCCGGCAGCCCCTGTCCCAGCCAGGCCGATaGACAAGCCACTGCCCACATTGCTGGACATCAGAG +
Preference number: 6 (lower is better)
Translates to: QGLRQPLSQPGR*TSHCPHCWTSE
Trigger: CTCTGATGTCCAGCAATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGACAGGGGCTGCCGGAGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS TCA 72 bp GGCCAGGAGCAGCCAGGTTGCCCCAGTCCTCCCGTGTaGCCTTGGATGGATCCCTCTGTCTCCTCCAGACCT +
Preference number: 6 (lower is better)
Translates to: GQEQPGCPSPPV*PWMDPSVSSRP
Trigger: AGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGCAACCTGGCTGCTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533824.5
CDS CCA 72 bp CCAGGTGGCCAGCACTGTGAGCCCGAAAATGAGACCTaGCCAAGGGATGTCCCCGCTCACAGGGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: PGGQHCEPENET*PRDVPAHRVPK
Trigger: CTTCGGGACCCTGTGAGCGGGGACATCCCTTGGCCAGGTCTCATTTTCGGGCTCACAGTGCTGGCCACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000236495.9
ENST00000438567.7
ENST00000493837.6
ENST00000533824.5
CDS CCA 72 bp AGCCTGTCACTCAGCAAGCCCAGCCCCAGCCTCATGTaGGCCCTCAGGTTGGAACTGGCATGGGGATTGGGG +
Preference number: 6 (lower is better)
Translates to: SLSLSKPSPSLM*ALRLELAWGLG
Trigger: CCCCAATCCCCATGCCAGTTCCAACCTGAGGGCCCACATGAGGCTGGGGCTGGGCTTGCTGAGTGACAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS CAA 90 bp TGTACACAGGGACGAAGACCCAGCCAAGGGCCAGGAGCAGCCAGGTaGCCCCAGTCCTCCCGTGTGACCTTGGATGGATCCCTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: CTQGRRPSQGPGAAR*PQSSRVTLDGSLCL
Trigger: GAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGCAACCTGGCTGCTCCTGGCCCTTGGCTGGGTCTTCGTCCCTGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533824.5
CDS GCA 72 bp GACAGAGGGGCGGCTTCCCACCCAGAGGCAGTGCTGTaGTGTGGGAGGCCCCCGAACAGAGAAATAAGAGAC +
Preference number: 6 (lower is better)
Translates to: DRGAASHPEAVL*CGRPPNREIRD
Trigger: GTCTCTTATTTCTCTGTTCGGGGGCCTCCCACAGCACAGCACTGCCTCTGGGTGGGAAGCCGCCCCTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493837.6
ENST00000527929.1
CDS GCA 72 bp CCCGGCCAGGAAATAGCCGCCAATGGTCCCTCGACTTaGACGGATGGACGACCAGATCCCCACAGCAATGAC +
Preference number: 6 (lower is better)
Translates to: PGQEIAANGPST*TDGRPDPHSND
Trigger: GTCATTGCTGTGGGGATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCCTGGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CCA 72 bp AGCTCATGGACCTCCCGGCCAGGAAATAGCCGCCAATaGTCCCTCGACTTGCACGGATGGACGACCAGATCC +
Preference number: 6 (lower is better)
Translates to: SSWTSRPGNSRQ*SLDLHGWTTRS
Trigger: GGATCTGGTCGTCCATCCGTGCAAGTCGAGGGACCATTGGCGGCTATTTCCTGGCCGGGAGGTCCATGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CAA 90 bp GCAGCCCCTGTCCCAGCCAGGCCGATGAACAAGCCACTGCCCACATaGCTGGACATCAGAGATGCTCCAATTGGCCACCAGCTCATGGAC +
Preference number: 6 (lower is better)
Translates to: AAPVPARPMNKPLPT*LDIRDAPIGHQLMD
Trigger: GTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGACAGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CCA 72 bp TCAAGGTACAGCCAGCCTGTCTCTTCTAGGCTATCCTaGGGAGTAACCAAGGCTCCAGCCCTGGGGTACCGC +
Preference number: 6 (lower is better)
Translates to: SRYSQPVSSRLS*GVTKAPALGYR
Trigger: GCGGTACCCCAGGGCTGGAGCCTTGGTTACTCCCCAGGATAGCCTAGAAGAGACAGGCTGGCTGTACCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525901.1
CDS CAA 72 bp GGAGCAGCCAGGTTGCCCCAGTCCTCCCGTGTGACCTaGGATGGATCCCTCTGTCTCCTCCAGACCTTGATT +
Preference number: 6 (lower is better)
Translates to: GAARLPQSSRVT*DGSLCLLQTLI
Trigger: AATCAAGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGCAACCTGGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533824.5
CDS CAA 90 bp CAAGGGCCAGGAGCAGCCAGGTTGCCCCAGTCCTCCCGTGTGACCTaGGATGGATCCCTCTGTCTCCTCCAGACCTTGATTTCCTCATGT +
Preference number: 6 (lower is better)
Translates to: QGPGAARLPQSSRVT*DGSLCLLQTLISSC
Trigger: ACATGAGGAAATCAAGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGCAACCTGGCTGCTCCTGGCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533824.5
CDS TCA 72 bp ATAAGAGACCTGGGACCTGACCCCAGTCCTCCCGTGTaGCCTTGGATGGATCCCTCTGTCTCCTCCAGACCT +
Preference number: 6 (lower is better)
Translates to: IRDLGPDPSPPV*PWMDPSVSSRP
Trigger: AGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCACACGGGAGGACTGGGGTCAGGTCCCAGGTCTCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493837.6
ENST00000527929.1
CDS GCA 72 bp GATGTCGTAGGCGTGCAGACCAACTCTGGAGTCCAGTaGTATGTGTGGAGCTGTCTCAGTCCTGACCCCGTC +
Preference number: 6 (lower is better)
Translates to: DVVGVQTNSGVQ*YVWSCLSPDPV
Trigger: GACGGGGTCAGGACTGAGACAGCTCCACACATAGCACTGGACTCCAGAGTTGGTCTGCACGCCTACGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CCA 72 bp TGGACATCAGAGATGCTCCAATTGGCCACCAGCTCATaGACCTCCCGGCCAGGAAATAGCCGCCAATGGTCC +
Preference number: 6 (lower is better)
Translates to: WTSEMLQLATSS*TSRPGNSRQWS
Trigger: GGACCATTGGCGGCTATTTCCTGGCCGGGAGGTCCATGAGCTGGTGGCCAATTGGAGCATCTCTGATGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CCA 72 bp TGGTGTAGACGGCAGTCACCACCAGCAGGATCCCTGTaGAGAGGTACAGGTTCCAGCCCAATGCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: WCRRQSPPAGSL*RGTGSSPMPSG
Trigger: TCCAGATGGCATTGGGCTGGAACCTGTACCTCTCCACAGGGATCCTGCTGGTGGTGACTGCCGTCTACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000527929.1
ENST00000533824.5
CDS CAA 72 bp GTCCCAGCCAGGCCGATGAACAAGCCACTGCCCACATaGCTGGACATCAGAGATGCTCCAATTGGCCACCAG +
Preference number: 6 (lower is better)
Translates to: VPARPMNKPLPT*LDIRDAPIGHQ
Trigger: CTGGTGGCCAATTGGAGCATCTCTGATGTCCAGCAATGTGGGCAGTGGCTTGTTCATCGGCCTGGCTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000533824.5
CDS CAA 90 bp TCCTCCCGTGTGACCTTGGATGGATCCCTCTGTCTCCTCCAGACCTaGATTTCCTCATGTTCCACTCGAAGCCACCTACGGCAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: SSRVTLDGSLCLLQT*ISSCSTRSHLRQGL
Trigger: GAGGCCTTGCCGTAGGTGGCTTCGAGTGGAACATGAGGAAATCAAGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCACACGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000533824.5
CDS TCA 72 bp GGAGGAAGATGGGGCTTGGGCTCAAGACCCTTGGTTTaGAGTAGCGAGAACCCTGCTCTTTGGGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GGRWGLGSRPLV*SSENPALWELQ
Trigger: CTGCAGCTCCCAAAGAGCAGGGTTCTCGCTACTTCAAACCAAGGGTCTTGAGCCCAAGCCCCATCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS GCA 72 bp CTTCTTCAGATACTGCGGCATTGTGACCACACCTGCTaGGATGTACACAGGGACGAAGACCCAGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: LLQILRHCDHTC*DVHRDEDPAKG
Trigger: GCCCTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS TCA 72 bp GGCCCCCAAATCGCTTCTTCAGATACTGCGGCATTGTaGCCACACCTGCTGCGATGTACACAGGGACGAAGA +
Preference number: 6 (lower is better)
Translates to: GPQIASSDTAAL*PHLLRCTQGRR
Trigger: TCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS GCA 72 bp TCGCTTCTTCAGATACTGCGGCATTGTGACCACACCTaGTGCGATGTACACAGGGACGAAGACCCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: SLLQILRHCDHT*CDVHRDEDPAK
Trigger: CTTGGCTGGGTCTTCGTCCCTGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS GCA 72 bp TGGATCCTCTGGCCCCCAAATCGCTTCTTCAGATACTaGGGCATTGTGACCACACCTGCTGCGATGTACACA +
Preference number: 6 (lower is better)
Translates to: WILWPPNRFFRY*GIVTTPAAMYT
Trigger: TGTGTACATCGCAGCAGGTGTGGTCACAATGCCGCAGTATCTGAAGAAGCGATTTGGGGGCCAGAGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000236495.9
ENST00000425816.5
ENST00000438567.7
ENST00000441260.2
ENST00000493837.6
ENST00000527929.1
ENST00000533824.5
CDS CCA 72 bp TGCCAGAGACAGAGGTGGGTTAGACCCTCAGTATTCTaGAGAAACCAGGCCAGCTTCCTTACGTTCCACTCG +
Preference number: 6 (lower is better)
Translates to: CQRQRWVRPSVF*RNQASFLTFHS
Trigger: CGAGTGGAACGTAAGGAAGCTGGCCTGGTTTCTCCAGAATACTGAGGGTCTAACCCACCTCTGTCTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493837.6
CDS CAA 72 bp GTGACCTTGGATGGATCCCTCTGTCTCCTCCAGACCTaGATTTCCTCATGTTCCACTCGAAGCCACCTACGG +
Preference number: 6 (lower is better)
Translates to: VTLDGSLCLLQT*ISSCSTRSHLR
Trigger: CCGTAGGTGGCTTCGAGTGGAACATGAGGAAATCAAGGTCTGGAGGAGACAGAGGGATCCATCCAAGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236495.9
ENST00000533824.5
CDS TCA 72 bp CCAGAAAGCTCCATTATTTTTGTGGAGTGGTGTCCATaGTATCCCTCAGCTTCTCAAGGTACAGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: PESSIIFVEWCP*YPSASQGTASL
Trigger: CAGGCTGGCTGTACCTTGAGAAGCTGAGGGATATCATGGACACCACTCCACAAAAATAATGGAGCTTTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525901.1
CDS TCA 72 bp AAGTGCCAGGATCTTCAAAGTTCTCTTGGAGTGAATTaGAAGGGGTCCAGCCTGGAGGATGTTGTAAAAGTG +
Preference number: 6 (lower is better)
Translates to: KCQDLQSSLGVN*KGSSLEDVVKV
Trigger: CACTTTTACAACATCCTCCAGGCTGGACCCCTTTCAATTCACTCCAAGAGAACTTTGAAGATCCTGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471020.1
ENST00000532322.5