RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC5A8 (Homo sapiens)

Ensembl gene IDs: ENSG00000256870

Ensembl transcript IDs: ENST00000536262.3, ENST00000572861.3

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGGCACAAGAATTAATGAACAGCACCAAGAAGACTTTGATCATTaGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGATTACCACC +
Preference number: 1 (lower is better)
Translates to: KGTRINEQHQEDFDH*AHGLSQPEYLLITT
Trigger: GGTGGTAATCAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCTGTTCATTAATTCTTGTGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTGCACCAAGAAGACTTTaGTCATTGGGCCCACGGTCT +
Preference number: 2 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPAPRRL*SLGPRS
Trigger: AGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGC...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR TCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTCCCCCAAACACTCATaGTACAACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYSPKHS*YNTHTH
Trigger: GTGTGTGTGTGTGTTGTATCATGAGTGTTTGGGGGA...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGTCCCCCAAACACTCATaGTACAACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLSPKHS*YNTHTH
Trigger: GTGTGTGTGTGTGTTGTATCATGAGTGTTTGGGGGA...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR GCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTGACCTGTTACCTCATTaGTCCCTAAGAATGGTGTAT +
Preference number: 2 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPDLLPH*SLRMVY
Trigger: ATACACCATTCTTAGGGAGCAATGAGGTAACAGGTC...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATTTGCAGGTTAGTATATaGCCTGGACTGATAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LISQDLGWHDSHECLETYLQVSI*PGLIGG
Trigger: TCCCCCTATCAGTCCAGGGCATATACTAACCTGCAA...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR TCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGGCACCAAGAAGACTTTaGTCATTGGGCCCACGGTCT +
Preference number: 2 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRAPRRL*SLGPRS
Trigger: AGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGC...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGAGCCAGGATTTGGGGTaGCATGATTCACATGAGTGT +
Preference number: 2 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILSQDLG*HDSHEC
Trigger: ACACTCATGTGAATCATGCCACCCCAAATCCTGGCT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGAGAGGGAAATGTCAATaGCAGAATTCTAAACTCCAG +
Preference number: 2 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILRGKCQ*QNSKLQ
Trigger: CTGGAGTTTAGAATTCTGGCATTGACATTTCCCTCT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAGCACCAAGAAGACTTaGATCATTGGGCCCACGGTC +
Preference number: 3 (lower is better)
Translates to: LISQDLGWHDSHECLETYSTKKT*IIGPTV
Trigger: GACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTACAATAAAACCCAAGTaGATAGGTCAGAAACTGGGC +
Preference number: 3 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPTIKPK*IGQKLG
Trigger: GCCCAGTTTCTGACCTATCAACTTGGGTTTTATTGT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAGACCTGTTACCTCATaGCTCCCTAAGAATGGTGTA +
Preference number: 3 (lower is better)
Translates to: LISQDLGWHDSHECLETYRPVTS*LPKNGV
Trigger: TACACCATTCTTAGGGAGCAATGAGGTAACAGGTCT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR CCA 72 bp TTTATAGTCTGGGACTTGATAAGCCAGGATTTGGGGTaGCATGATTCACATGAGTGTCTTGAGACATATCCA +
Preference number: 3 (lower is better)
Translates to: FIVWDLISQDLG*HDSHECLETYP
Trigger: TGGATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAAGTCCCAGACTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CAA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGAGCACCAAGAAGACTTaGATCATTGGGCCCACGGTC +
Preference number: 3 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILSTKKT*IIGPTV
Trigger: GACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCAGCCAGAATACTTATaGATTACCACCTTCCTGATT +
Preference number: 3 (lower is better)
Translates to: LISQDLGWHDSHECLETYQPEYL*ITTFLI
Trigger: AATCAGGAAGGTGGTAATCAATAAGTATTCTGGCTG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCCCTGCACCCGCCGCTaGGAGCCGCGCCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPPCTRR*EPRPSN
Trigger: GTTTGAGGGGCGCGGCTCGCAGCGGCGGGTGCAGGG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGGCCGCACGGTCGCCTaGGCCCTGCGCGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLGRTVA*ALRANW
Trigger: CCAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCAGCGCCACGGGCACTaGGGTCATTCTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPQRHGH*GHSAAA
Trigger: GGCGGCCGCAGAATGACCGCAGTGCCCGTGGCGCTG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTGCGTCCCGCGGGGACTaGAGGCGTCCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPASRGD*RRPPGV
Trigger: GACACCTGGAGGACGCCTCCAGTCCCCGCGGGACGC...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCCCGTGGCGTGTCCATaGCCGCACGGTCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPPVACP*PHGRLS
Trigger: GCTCAGGCGACCGTGCGGCCATGGACACGCCACGGG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGCGGTCGCCTGAGCCCTaGGCGCAAACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLRSPEP*AQTGGP
Trigger: GGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCG...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGCAGACCACCCCCGTTaGCACTACCGCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLADHPR*HYRAPQ
Trigger: CTGTGGGGCGCGGTAGTGGCAACGGGGGTGGTCTGC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCTTATCCCGGATCCCTaGCGCGCAGGCGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPLIPDP*RAGVAS
Trigger: GGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGGTGCCGATGCCCCGTaGCGTGTCCATGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYGADAP*RVHGRT
Trigger: CGTGCGGCCATGGACACGCCACGGGGCATCGGCACC...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACGATGGCGGCCGAGATaGCCAGCATGCCCGCGAACA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLRWRPR*PACPRT
Trigger: TGTTCGCGGGCATGCTGGTCATCTCGGCCGCCATCG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACCACGAAGGTGCCGATaGCCCGTGGCGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLPRRCR*PVACPW
Trigger: CCATGGACACGCCACGGGGCATCGGCACCTTCGTGG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGCAGACCACCCCCGTTaGCACTACCGCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLADHPR*HYRAPQ
Trigger: CTGTGGGGCGCGGTAGTGGCAACGGGGGTGGTCTGC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGTCCTTGGAGGTCTGCTaGCCGCCCCCAGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLSLEVC*PPPAKA
Trigger: CGCCTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGA...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAAAGTCCTTGGAGGTCTaGTGGCCGCCCCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLKSLEV*WPPPAK
Trigger: CTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGACTT...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACGTGAGGAACTGGAGTaGCCGAGTTCGCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLREELE*PSSPRR
Trigger: GCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCACG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCCCGTGGCGTGTCCATaGCCGCACGGTCGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYPVACP*PHGRLS
Trigger: GCTCAGGCGACCGTGCGGCCATGGACACGCCACGGG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCCATCAGGAAGTCCTTaGAGGTCTGCTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPPSGSP*RSAGRP
Trigger: GGGGCGGCCAGCAGACCTCCAAGGACTTCCTGATGG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCGTGAGGAACTGGAGTaGCCGAGTTCGCCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYREELE*PSSPRR
Trigger: GCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCACG...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCCATCAGGAAGTCCTTaGAGGTCTGCTGGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYPSGSP*RSAGRP
Trigger: GGGGCGGCCAGCAGACCTCCAAGGACTTCCTGATGG...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGGCGCCGGGGACACCTaGGCAGATGAGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYGAGDT*ADENWS
Trigger: GCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCAGGACAGTGACGGCTaGCATGAAGCTAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPQDSDG*HEASGE
Trigger: CTCACCGCTAGCTTCATGTCAGCCGTCACTGTCCTG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGACCCGCTGCCCTGAGTaGTCACCACGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLTRCPE*SPREEL
Trigger: CAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCCACGAAGGTGCCGATaGCCCGTGGCGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYPRRCR*PVACPW
Trigger: CCATGGACACGCCACGGGGCATCGGCACCTTCGTGG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGGACACCTGAGCAGATaGGAACTGGAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLGHLSR*ELEPPA
Trigger: AGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGCAGGACAGTGACGGCTaGCATGAAGCTAGCGGTGAG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLQDSDG*HEASGE
Trigger: CTCACCGCTAGCTTCATGTCAGCCGTCACTGTCCTG...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCAAAGCTCCCATAAGTaGCGCCAGCGCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYQSSHK*RQRSHS
Trigger: GGAATGGCTGCGCTGGCGTCACTTATGGGAGCTTTG...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGGAAAATCGACCCGCTaGCCTGAGTGCTCACCACGT +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLGKSTR*PECSPR
Trigger: ACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCCCTGCACCCGCCGCTaGGAGCCGCGCCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRPCTRR*EPRPSN
Trigger: GTTTGAGGGGCGCGGCTCGCAGCGGCGGGTGCAGGG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCGGTCGCCTGAGCCCTaGGCGCAAACTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFRSPEP*AQTGGP
Trigger: GGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAAGTCCTTGGAGGTCTaGTGGCCGCCCCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYKSLEV*WPPPAK
Trigger: CTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGACTT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGTGTGCAGTAGAATGTaGAGACCACCCCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLVCSRM*RPPPLP
Trigger: TGGCAACGGGGGTGGTCTGCACATTCTACTGCACAC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGCACTGCGGTCATTCTaGGGCCGCCCATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYALRSF*GRPSGS
Trigger: ACTTCCTGATGGGCGGCCGCAGAATGACCGCAGTGC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCAGCGCCACGGGCACTaGGGTCATTCTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRQRHGH*GHSAAA
Trigger: GGCGGCCGCAGAATGACCGCAGTGCCCGTGGCGCTG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGTGTGCAGTAGAATGTaGAGACCACCCCCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYVCSRM*RPPPLP
Trigger: TGGCAACGGGGGTGGTCTGCACATTCTACTGCACAC...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGGCGTCCCGCGGGGACTaGAGGCGTCCTCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRASRGD*RRPPGV
Trigger: GACACCTGGAGGACGCCTCCAGTCCCCGCGGGACGC...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGGGTGCCGATGCCCCGTaGCGTGTCCATGGCCGCACG +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILGADAP*RVHGRT
Trigger: CGTGCGGCCATGGACACGCCACGGGGCATCGGCACC...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAAGGCATGAGCTGGTCTaGTGCAGACACTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLRHELV*CRHFLG
Trigger: GCCAAGAAAGTGTCTGCACCAGACCAGCTCATGCCT...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGCACCTGGGATTGGTTaGCACCGTAGATGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYAPGIG*HRRCWS
Trigger: GGACCAGCATCTACGGTGTCAACCAATCCCAGGTGC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGAGCCCACAAAACACTaGGCATGTGAGGATTGCCCA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLEPTKH*ACEDCP
Trigger: TGGGCAATCCTCACATGCTCAGTGTTTTGTGGGCTC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCCATACCAAATACGCTaGGTGCTGCCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPPYQIR*VLPATK
Trigger: CTTTGTTGCAGGCAGCACTCAGCGTATTTGGTATGG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGGAAAATCGACCCGCTaGCCTGAGTGCTCACCACGT +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYGKSTR*PECSPR
Trigger: ACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGCTTATCCCGGATCCCTaGCGCGCAGGCGTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILLIPDP*RAGVAS
Trigger: GGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAG...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATTCCTTGGAGGTCTGCTaGCCGCCCCCAGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDSLEVC*PPPAKA
Trigger: CGCCTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGA...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATGGCGCCGGGGACACCTaGGCAGATGAGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDGAGDT*ADENWS
Trigger: GCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCC...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGAAAACACTGAGCATGTaGGGATTGCCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLKTLSM*GLPRVP
Trigger: TGGGACTCTGGGCAATCCTCACATGCTCAGTGTTTT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGTACCAAATAAGGCATaGGCTGGTCTGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLVPNKA*AGLVQT
Trigger: TGTCTGCACCAGACCAGCTCATGCCTTATTTGGTAC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCCCCCAAACACTCATaGTACAACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLSPKHS*YNTHTH
Trigger: GTGTGTGTGTGTGTTGTATCATGAGTGTTTGGGGGA...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTAGCTCAATGCAGCCTTaGAATCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSSMQP*NPGLKL
Trigger: TAGCTTAAGCCCAGGATTTCAAGGCTGCATTGAGCT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCCCACACCACGAAGGTaGCGATGCCCCGTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDPTPRR*RCPVAC
Trigger: ACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCCCACACCACGAAGGTaGCGATGCCCCGTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRPTPRR*RCPVAC
Trigger: ACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCATGAGCTGGTCTGGTaGAGACACTTTCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYHELVW*RHFLGC
Trigger: ACAGCCAAGAAAGTGTCTGCACCAGACCAGCTCATG...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTACAAACGAGTCCCATTaGTCTTGCCACTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPTNESH*SCHSDL
Trigger: CAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGAACAGGCCCATAAGTaGTCCACCAACCATACCAAA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLEQAHK*STNHTK
Trigger: TTTGGTATGGTTGGTGGACCACTTATGGGCCTGTTC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTAGCCAGGATTTGGGGTaGCATGATTCACATGAGTGT +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSQDLG*HDSHEC
Trigger: ACACTCATGTGAATCATGCCACCCCAAATCCTGGCT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAAACAAGTGCTCCAATTaGGTTGGCAAAGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLNKCSN*VGKGNQ
Trigger: TTGGTTCCCTTTGCCAACTCAATTGGAGCACTTGTT...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTACCCGCTGCCCTGAGTaGTCACCACGTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFTRCPE*SPREEL
Trigger: CAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGCACTGCGGTCATTCTaGGGCCGCCCATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFALRSF*GRPSGS
Trigger: ACTTCCTGATGGGCGGCCGCAGAATGACCGCAGTGC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGTGCTGATTCCACCTTaGATCACCACAGCCTGTATA +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYVLIPP*ITTACI
Trigger: TATACAGGCTGTGGTGATGCAAGGTGGAATCAGCAC...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGACAAACGAGTCCCATTaGTCTTGCCACTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLTNESH*SCHSDL
Trigger: CAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTTGCAGGTTAGTATATaGCCTGGACTGATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYLQVSI*PGLIGG
Trigger: TCCCCCTATCAGTCCAGGGCATATACTAACCTGCAA...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGTAATCATAGCTCAATaGAGCCTTGAAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLVIIAQ*SLEILG
Trigger: GCCCAGGATTTCAAGGCTGCATTGAGCTATGATTAC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCACAGTCATGGTACCTaGAATATAGGGCGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYHSHGT*NIGRAH
Trigger: GTGGGCTCGCCCTATATTCCAGGTACCATGACTGTG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGCAAGGATCACAGTCATaGTACCTGGAATATAGGGCG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLQGSQS*YLEYRA
Trigger: CGCCCTATATTCCAGGTACCATGACTGTGATCCTTG...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTGTGCTCCAATTGAGTTaGCAAAGGGAACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPVLQLS*QREPKC
Trigger: GCATTTTGGTTCCCTTTGCCAACTCAATTGGAGCAC...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGTGCTCCAATTGAGTTaGCAAAGGGAACCAAAATGC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLVLQLS*QREPKC
Trigger: GCATTTTGGTTCCCTTTGCCAACTCAATTGGAGCAC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACAACCCATAGAGAAATaGCAAATCCAGCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLQPIEK*QIQPSD
Trigger: GTCTGATGGCTGGATTTGCCATTTCTCTATGGGTTG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR CAA 72 bp GCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTaGAGACATATCCAAGCCCAGGGCAATAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: ARIWGGMIHMSV*RHIQAQGNKQK
Trigger: TTTCTGTTTATTGCCCTGGGCTTGGATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGGACACCTGAGCAGATaGGAACTGGAGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFGHLSR*ELEPPA
Trigger: AGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATACAGATCAAATCCTGTaGCTTGATTCAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYTDQIL*LDSKPG
Trigger: CCCTGGCTTTGAATCAAGTCACAGGATTTGATCTGT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGACAGATCAAATCCTGTaGCTTGATTCAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLTDQIL*LDSKPG
Trigger: CCCTGGCTTTGAATCAAGTCACAGGATTTGATCTGT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCAAATCCAGCCACCATaGTCCCAACTTGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPQIQPP*SQLEKH
Trigger: ATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGCACCTGGGATTGGTTaGCACCGTAGATGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFAPGIG*HRRCWS
Trigger: GGACCAGCATCTACGGTGTCAACCAATCCCAGGTGC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCTTGCCACTCTGATCTaGGTTCAATTCAATGTGGTT +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPLATLI*VQFNVV
Trigger: AACCACATTGAATTGAACTCAGATCAGAGTGGCAAG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACTTGCCACTCTGATCTaGGTTCAATTCAATGTGGTT +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLLATLI*VQFNVV
Trigger: AACCACATTGAATTGAACTCAGATCAGAGTGGCAAG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTACTGGAGGACACTGTaGTTAATGTCCCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYYWRTL*LMSHCK
Trigger: CTTACAGTGGGACATTAAGCACAGTGTCCTCCAGTA...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATACCAAATACGCTGAGTaGTGCCTGCAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYTKYAE*CLQQSS
Trigger: GGAGCTTTGTTGCAGGCAGCACTCAGCGTATTTGGT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGACCTGTTACCTCATTaGTCCCTAAGAATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLDLLPH*SLRMVY
Trigger: ATACACCATTCTTAGGGAGCAATGAGGTAACAGGTC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGTAATCATAGCTCAATaGAGCCTTGAAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYVIIAQ*SLEILG
Trigger: GCCCAGGATTTCAAGGCTGCATTGAGCTATGATTAC...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCACCACGTGAGGAACTaGAGTGGCCGAGTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFHHVRN*SGRVRQ
Trigger: TTGGCGAACTCGGCCACTCCAGTTCCTCACGTGGTG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR CAA 72 bp CATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATaGATTACCACCTTCCTGATTCAGAATCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: HWAHGLSQPEYL*ITTFLIQNQFA
Trigger: TGCAAACTGATTCTGAATCAGGAAGGTGGTAATCAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR CAA 72 bp AAGGCACAAGAATTAATGAACAGCACCAAGAAGACTTaGATCATTGGGCCCACGGTCTTTCCCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KAQELMNSTKKT*IIGPTVFPSQN
Trigger: ATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCTGTTCATTAATTCTTGTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGAATTGTTTGAACAATaGAGAGGACTGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLELFEQ*RGLFHR
Trigger: TCTGTGGAACAGTCCTCTTCATTGTTCAAACAATTC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATAGAGTCCCACAAGATTaGTGTAGAGAGACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYRVPQD*CRETVL
Trigger: CAAAACTGTCTCTCTACATCAATCTTGTGGGACTCT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCAAAGCTCCCATAAGTaGCGCCAGCGCAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDQSSHK*RQRSHS
Trigger: GGAATGGCTGCGCTGGCGTCACTTATGGGAGCTTTG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGATCTGTCCAGATAACTaGTTTAAGACCACCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLICPDN*FKTTQC
Trigger: ACACTGGGTGGTCTTAAAGCAGTTATCTGGACAGAT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGCTGTATAATCACGGATaGAAATCCAGCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLLYNHG*KSSHHD
Trigger: ATCATGGTGGCTGGATTTGCATCCGTGATTATACAG...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGTAGAGAGACAGTTTTaGCTGGAATCTGCTTTTACA +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLVERQF*LESAFT
Trigger: TGTAAAAGCAGATTCCAGGCAAAACTGTCTCTCTAC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTACAAGCTCAGTTAGAGTaGACAATAAAACCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLQAQLE*TIKPKL
Trigger: CAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTG...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCAAGCTCAGTTAGAGTaGACAATAAAACCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPQAQLE*TIKPKL
Trigger: CAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCACCACGTGAGGAACTaGAGTGGCCGAGTTCGCCAA +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRHHVRN*SGRVRQ
Trigger: TTGGCGAACTCGGCCACTCCAGTTCCTCACGTGGTG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGTGCAGACACTTTCTTaGCTGTCCAAGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYVQTLS*LSKDHS
Trigger: ACTGTGATCCTTGGACAGCCAAGAAAGTGTCTGCAC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGAACAGGCCCATAAGTaGTCCACCAACCATACCAAA +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYEQAHK*STNHTK
Trigger: TTTGGTATGGTTGGTGGACCACTTATGGGCCTGTTC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGATATCAAGGTGCAATaGCAATGTTCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLDIKVQ*QCSLRK
Trigger: CTTCCTGAGAGAACATTGCCATTGCACCTTGATATC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCCAGTTATCCATCAGTaGAGTCCTTTGAACATTGTA +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPPVIHQ*SPLNIV
Trigger: TACAATGTTCAAAGGACTCCACTGATGGATAACTGG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAGCCAGGATTTGGGGTaGCATGATTCACATGAGTGT +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYSQDLG*HDSHEC
Trigger: ACACTCATGTGAATCATGCCACCCCAAATCCTGGCT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGACCATGATCCCAACTTaGAAAACATCTGTCCAGATA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLTMIPT*KTSVQI
Trigger: TATCTGGACAGATGTTTTTCAAGTTGGGATCATGGT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAACAAGTGCTCCAATTaGGTTGGCAAAGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYNKCSN*VGKGNQ
Trigger: TTGGTTCCCTTTGCCAACTCAATTGGAGCACTTGTT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTATCTTCCACTGGATGTaGTTTATAGCTCAAAACATG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPIFHWM*FIAQNM
Trigger: CATGTTTTGAGCTATAAATCACATCCAGTGGAAGAT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGTAGAGAGACAGTTTTaGCTGGAATCTGCTTTTACA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLVERQF*LESAFT
Trigger: TGTAAAAGCAGATTCCAGGCAAAACTGTCTCTCTAC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTTGTCTCATTGTAGGTaGTGTTACAGCCTTGGATAT +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYLSHCR*CYSLGY
Trigger: ATATCCAAGGCTGTAACAGCACCTACAATGAGACAA...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGAGAGGGAAATGTCAATaGCAGAATTCTAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLRGKCQ*QNSKLQ
Trigger: CTGGAGTTTAGAATTCTGGCATTGACATTTCCCTCT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGATTCAGAATCAGTTTaGAGGTTAGTATATGCCCTG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLDSESV*RLVYAL
Trigger: CAGGGCATATACTAACCTGCAAACTGATTCTGAATC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCACAGTCATGGTACCTaGAATATAGGGCGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFHSHGT*NIGRAH
Trigger: GTGGGCTCGCCCTATATTCCAGGTACCATGACTGTG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCAACCCATAGAGAAATaGCAAATCCAGCCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYQPIEK*QIQPSD
Trigger: GTCTGATGGCTGGATTTGCCATTTCTCTATGGGTTG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTAGTCATCTAACTCCATaGAGCTTAACCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSHLTP*SLTILK
Trigger: CTTCAAAATGGTTAAGCTCCATGGAGTTAGATGACT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTTCAAATCCTGTGACTTaGTTCAAAGCCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFSNPVT*FKARAG
Trigger: CCCTGCCCTGGCTTTGAATCAAGTCACAGGATTTGA...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTAAAACACTGAGCATGTaGGGATTGCCCAGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFKTLSM*GLPRVP
Trigger: TGGGACTCTGGGCAATCCTCACATGCTCAGTGTTTT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATGAGCCCACAAAACACTaGGCATGTGAGGATTGCCCA +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDEPTKH*ACEDCP
Trigger: TGGGCAATCCTCACATGCTCAGTGTTTTGTGGGCTC...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGTACCAAATAAGGCATaGGCTGGTCTGGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFVPNKA*AGLVQT
Trigger: TGTCTGCACCAGACCAGCTCATGCCTTATTTGGTAC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGATCTTCCACTGGATGTaGTTTATAGCTCAAAACATG +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLIFHWM*FIAQNM
Trigger: CATGTTTTGAGCTATAAATCACATCCAGTGGAAGAT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGGCACCAAGAAGACTTTaGTCATTGGGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILAPRRL*SLGPRS
Trigger: AGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGC...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGACTGGAGCCTCCAGCTaGTTCCAGCGAATCTACACA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILTGASS*FQRIYT
Trigger: TGTGTAGATTCGCTGGAAGCAGCTGGAGGCTCCAGT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536262.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTACGCTGAGTGCTGCCTaGAACAAAGCTCCCATAAGT +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFTLSAA*NKAPIS
Trigger: ACTTATGGGAGCTTTGTTGCAGGCAGCACTCAGCGT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCCTCAAACCCAGGTATaGGACCTCGGAAAATCGACC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRPQTQV*DLGKST
Trigger: GGTCGATTTTCCGAGGTCCCATACCTGGGTTTGAGG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATAGAGACAGTTTTGCCTaGAATCTGCTTTTACAAGAA +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYRDSFA*NLLLQE
Trigger: TTCTTGTAAAAGCAGATTCCAGGCAAAACTGTCTCT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGAGAGACAGTTTTGCCTaGAATCTGCTTTTACAAGAA +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLRDSFA*NLLLQE
Trigger: TTCTTGTAAAAGCAGATTCCAGGCAAAACTGTCTCT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGAGGCATGAGCTGGTCTaGTGCAGACACTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRRHELV*CRHFLG
Trigger: GCCAAGAAAGTGTCTGCACCAGACCAGCTCATGCCT...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGTGGTTAGTATGTATCTaGGGTCTAAGTTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLWLVCI*GLSSVF
Trigger: GAAAACAGAACTTAGACCCCAGATACATACTAACCA...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGTCAAATCCTGTGACTTaGTTCAAAGCCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILSNPVT*FKARAG
Trigger: CCCTGCCCTGGCTTTGAATCAAGTCACAGGATTTGA...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTAGACAGAGACCTTTCTaGGAGCGATCTGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFRQRPF*ERSEVR
Trigger: CCTTACTTCAGATCGCTCTCAGAAAGGTCTCTGTCT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGCCATACCAAATACGCTaGGTGCTGCCTGCAACAAAG +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILPYQIR*VLPATK
Trigger: CTTTGTTGCAGGCAGCACTCAGCGTATTTGGTATGG...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCTCCTGTTGATAAACTaGCAAGTATCCCCACTAATA +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYLLLIN*QVSPLI
Trigger: TATTAGTGGGGATACTTGTCAGTTTATCAACAGGAG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCATGAGCTGGTCTGGTaGAGACACTTTCTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRHELVW*RHFLGC
Trigger: ACAGCCAAGAAAGTGTCTGCACCAGACCAGCTCATG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATACCAAATACGCTGAGTaGTGCCTGCAACAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDTKYAE*CLQQSS
Trigger: GGAGCTTTGTTGCAGGCAGCACTCAGCGTATTTGGT...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGAGTCCCATTGCTCTTaGCACTCTGATCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFESHCS*HSDLSS
Trigger: TGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGATTCAGAATCAGTTTaGAGGTTAGTATATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYDSESV*RLVYAL
Trigger: CAGGGCATATACTAACCTGCAAACTGATTCTGAATC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTGTGCAGACACTTTCTTaGCTGTCCAAGGATCACAGT +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFVQTLS*LSKDHS
Trigger: ACTGTGATCCTTGGACAGCCAAGAAAGTGTCTGCAC...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATATAAAAAGTCCTCTTTaGTTAGTATGTATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYIKSPL*LVCIWG
Trigger: ACCCCAGATACATACTAACCAAAGAGGACTTTTTAT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGATAAAAAGTCCTCTTTaGTTAGTATGTATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLIKSPL*LVCIWG
Trigger: ACCCCAGATACATACTAACCAAAGAGGACTTTTTAT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGAGTTCAATTCAATGTaGTTGAAAGCAGGATTATCA +
Preference number: 4 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYEFNSM*LKAGLS
Trigger: TGATAATCCTGCTTTCAACCACATTGAATTGAACTC...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATGAAGACTTTGATCATTaGGCCCACGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDEDFDH*AHGLSQ
Trigger: CTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTC...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGGAAGACTTTGATCATTaGGCCCACGGTCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDREDFDH*AHGLSQ
Trigger: CTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTC...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGAGACAGAGACCTTTCTaGGAGCGATCTGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRRQRPF*ERSEVR
Trigger: CCTTACTTCAGATCGCTCTCAGAAAGGTCTCTGTCT...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATTCAATTCAATGTGGTTaGAAGCAGGATTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYSIQCG*KQDYQF
Trigger: GAACTGATAATCCTGCTTTCAACCACATTGAATTGA...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGAGCTCAATGCAGCCTTaGAATCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILSSMQP*NPGLKL
Trigger: TAGCTTAAGCCCAGGATTTCAAGGCTGCATTGAGCT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGGTGCTGATTCCACCTTaGATCACCACAGCCTGTATA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILVLIPP*ITTACI
Trigger: TATACAGGCTGTGGTGATGCAAGGTGGAATCAGCAC...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCAGAAGGTGTGTCTTTaGAAAGGGTTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYQKVCL*KGLGLK
Trigger: TTTTAATCCTAACCCTTTGCAAAGACACACCTTCTG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGGAGTCCCATTGCTCTTaGCACTCTGATCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRESHCS*HSDLSS
Trigger: TGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTC...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGTTGCAGGTTAGTATATaGCCTGGACTGATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRLQVSI*PGLIGG
Trigger: TCCCCCTATCAGTCCAGGGCATATACTAACCTGCAA...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATTGGTTAGTATGTATCTaGGGTCTAAGTTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYWLVCI*GLSSVF
Trigger: GAAAACAGAACTTAGACCCCAGATACATACTAACCA...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAGTCATCTAACTCCATaGAGCTTAACCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYSHLTP*SLTILK
Trigger: CTTCAAAATGGTTAAGCTCCATGGAGTTAGATGACT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTAGAGTCCCACAAGATTaGTGTAGAGAGACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFRVPQD*CRETVL
Trigger: CAAAACTGTCTCTCTACATCAATCTTGTGGGACTCT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTATCTGTCCAGATAACTaGTTTAAGACCACCCAGTGT +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFICPDN*FKTTQC
Trigger: ACACTGGGTGGTCTTAAAGCAGTTATCTGGACAGAT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGTACTGGAGGACACTGTaGTTAATGTCCCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRYWRTL*LMSHCK
Trigger: CTTACAGTGGGACATTAAGCACAGTGTCCTCCAGTA...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCCTTGGATATCAAGGTaGAATGGCAATGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFPWISR*NGNVLS
Trigger: TGAGAGAACATTGCCATTGCACCTTGATATCCAAGG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATGAGTTCAATTCAATGTaGTTGAAAGCAGGATTATCA +
Preference number: 4 (lower is better)
Translates to: LISQDLGWHDSHECLETYEFNSM*LKAGLS
Trigger: TGATAATCCTGCTTTCAACCACATTGAATTGAACTC...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTAGCTTCCCTAATAACTaGGACTACAAGTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFSFPNN*DYKYVA
Trigger: TGCCACATACTTGTAGTCCCAGTTATTAGGGAAGCT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
3UTR CAA 72 bp AGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTaGATAGGTCAGAAACTGGGCATGCAGATAAAAATT +
Preference number: 4 (lower is better)
Translates to: RQAQLECTIKPK*IGQKLGMQIKI
Trigger: AATTTTTATCTGCATGCCCAGTTTCTGACCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGCAAATCCAGCCACCATaGTCCCAACTTGAAAAACAT +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILQIQPP*SQLEKH
Trigger: ATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTG...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATTTGCTCTTGCCACTCTaGTCTGAGTTCAATTCAATG +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDLLLPL*SEFNSM
Trigger: CATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAA...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGTTGCTCTTGCCACTCTaGTCTGAGTTCAATTCAATG +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRLLLPL*SEFNSM
Trigger: CATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAA...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCTGTATAATCACGGATaGAAATCCAGCCACCATGAT +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDLYNHG*KSSHHD
Trigger: ATCATGGTGGCTGGATTTGCATCCGTGATTATACAG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCAAGAAATATATCTCTaGACCTGGGATTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFQEIYL*TWDWLT
Trigger: TGTCAACCAATCCCAGGTGCAGAGATATATTTCTTG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCCTTGGATATCAAGGTaGAATGGCAATGTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDPWISR*NGNVLS
Trigger: TGAGAGAACATTGCCATTGCACCTTGATATCCAAGG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTAGAGGGAAATGTCAATaGCAGAATTCTAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFRGKCQ*QNSKLQ
Trigger: CTGGAGTTTAGAATTCTGGCATTGACATTTCCCTCT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGGACCTGTTACCTCATTaGTCCCTAAGAATGGTGTAT +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILDLLPH*SLRMVY
Trigger: ATACACCATTCTTAGGGAGCAATGAGGTAACAGGTC...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGGATATCAAGGTGCAATaGCAATGTTCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILDIKVQ*QCSLRK
Trigger: CTTCCTGAGAGAACATTGCCATTGCACCTTGATATC...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGAGCTTCCCTAATAACTaGGACTACAAGTATGTGGCA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILSFPNN*DYKYVA
Trigger: TGCCACATACTTGTAGTCCCAGTTATTAGGGAAGCT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATGAATTGTTTGAACAATaGAGAGGACTGTTCCACAGA +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDELFEQ*RGLFHR
Trigger: TCTGTGGAACAGTCCTCTTCATTGTTCAAACAATTC...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGACCATGATCCCAACTTaGAAAACATCTGTCCAGATA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILTMIPT*KTSVQI
Trigger: TATCTGGACAGATGTTTTTCAAGTTGGGATCATGGT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCTCCTGTTGATAAACTaGCAAGTATCCCCACTAATA +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDLLLIN*QVSPLI
Trigger: TATTAGTGGGGATACTTGTCAGTTTATCAACAGGAG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGCAAGAAATATATCTCTaGACCTGGGATTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILQEIYL*TWDWLT
Trigger: TGTCAACCAATCCCAGGTGCAGAGATATATTTCTTG...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGTTGTCTCATTGTAGGTaGTGTTACAGCCTTGGATAT +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILLSHCR*CYSLGY
Trigger: ATATCCAAGGCTGTAACAGCACCTACAATGAGACAA...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CCA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGCCAGTTATCCATCAGTaGAGTCCTTTGAACATTGTA +
Preference number: 4 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILPVIHQ*SPLNIV
Trigger: TACAATGTTCAAAGGACTCCACTGATGGATAACTGG...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR TCA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGTCAATTCAATGTGGTTaGAAGCAGGATTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRSIQCG*KQDYQF
Trigger: GAACTGATAATCCTGCTTTCAACCACATTGAATTGA...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR GCA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCAGAAGGTGTGTCTTTaGAAAGGGTTAGGATTAAAA +
Preference number: 4 (lower is better)
Translates to: EGNVNARILNSRVTSINDQKVCL*KGLGLK
Trigger: TTTTAATCCTAACCCTTTGCAAAGACACACCTTCTG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 90 bp CCGATGCCCCGTGGCGTGTCCATGGCCGCACGGTCGCCTGAGCCCTaGGCGCAAACTGGTGGCCCCGCGGCGCGCAGCCGGAGCCCGGCG +
Preference number: 5 (lower is better)
Translates to: PMPRGVSMAARSPEP*AQTGGPAARSRSPA
Trigger: CGCCGGGCTCCGGCTGCGCGCCGCGGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp CGGCGCGCAGCCGGAGCCCGGCGCGCACTTCTTATCCCGGATCCCTaGCGCGCAGGCGTGGCGTCCCGCGGGGACTGGAGGCGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RRAAGARRALLIPDP*RAGVASRGDWRRPP
Trigger: TGGAGGACGCCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAGAAGTGCGCGCCGGGCTCCGGCTGCGCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp GAAGGTGCCGATGCCCCGTGGCGTGTCCATGGCCGCACGGTCGCCTaGGCCCTGCGCGCAAACTGGTGGCCCCGCGGCGCGCAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: EGADAPWRVHGRTVA*ALRANWWPRGAQPE
Trigger: CTCCGGCTGCGCGCCGCGGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp CTTATCCCGGATCCCTGGCGCGCAGGCGTGGCGTCCCGCGGGGACTaGAGGCGTCCTCCAGGTGTCGGCCTCCGAACGCACCCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: LIPDPWRAGVASRGD*RRPPGVGLRTHPEA
Trigger: CGCCTCGGGGTGCGTTCGGAGGCCGACACCTGGAGGACGCCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp GAGCCCGGCGCGCACTTCTTATCCCGGATCCCTGGCGCGCAGGCGTaGCGTCCCGCGGGGACTGGAGGCGTCCTCCAGGTGTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EPGAHFLSRIPGAQA*RPAGTGGVLQVSAS
Trigger: GGAGGCCGACACCTGGAGGACGCCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAGAAGTGCGCGCCGGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp CGTAGTCCCACACCACGAAGGTGCCGATGCCCCGTGGCGTGTCCATaGCCGCACGGTCGCCTGAGCCCTGCGCGCAAACTGGTGGCCCCG +
Preference number: 5 (lower is better)
Translates to: RSPTPRRCRCPVACP*PHGRLSPARKLVAP
Trigger: CGGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGGACTACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 90 bp GCATGCCCGCGAACACCACGTAGTCCCACACCACGAAGGTGCCGATaGCCCGTGGCGTGTCCATGGCCGCACGGTCGCCTGAGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: ACPRTPRSPTPRRCR*PVACPWPHGRLSPA
Trigger: CGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGGACTACGTGGTGTTCGCGGGCATGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp GGCCGCCCCCAGCGAAGGCGTAGTAGATGCCGATGGCGGCCGAGATaGCCAGCATGCCCGCGAACACCACGTAGTCCCACACCACGAAGG +
Preference number: 5 (lower is better)
Translates to: GRPQRRRSRCRWRPR*PACPRTPRSPTPRR
Trigger: CCTTCGTGGTGTGGGACTACGTGGTGTTCGCGGGCATGCTGGTCATCTCGGCCGCCATCGGCATCTACTACGCCTTCGCTGGGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp CCACGGGCACTGCGGTCATTCTGCGGCCGCCCATCAGGAAGTCCTTaGAGGTCTGCTGGCCGCCCCCAGCGAAGGCGTAGTAGATGCCGA +
Preference number: 5 (lower is better)
Translates to: PRALRSFCGRPSGSP*RSAGRPQRRRSRCR
Trigger: TCGGCATCTACTACGCCTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGACTTCCTGATGGGCGGCCGCAGAATGACCGCAGTGCCCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 90 bp CGCGCCCCTCAAACCCAGGTATGGGACCTCGGAAAATCGACCCGCTaGCCTGAGTGCTCACCACGTGAGGAACTGGAGTGGCCGAGTTCG +
Preference number: 5 (lower is better)
Translates to: RAPQTQVWDLGKSTR*PECSPREELEWPSS
Trigger: CGAACTCGGCCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCCGAGGTCCCATACCTGGGTTTGAGGGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp CTGGAGTGGCCGAGTTCGCCAAGGCGCCGGGGACACCTGAGCAGATaGGAACTGGAGCCTCCAGCTGCTTCCAGCGAATCTACACAGGGA +
Preference number: 5 (lower is better)
Translates to: LEWPSSPRRRGHLSR*ELEPPAASSESTQG
Trigger: TCCCTGTGTAGATTCGCTGGAAGCAGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCCTTGGCGAACTCGGCCACTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536262.3
CDS GCA 90 bp CAAACCCAGGTATGGGACCTCGGAAAATCGACCCGCTGCCCTGAGTaGTCACCACGTGAGGAACTGGAGTGGCCGAGTTCGCCAAGGCGC +
Preference number: 5 (lower is better)
Translates to: QTQVWDLGKSTRCPE*SPREELEWPSSPRR
Trigger: GCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCCGAGGTCCCATACCTGGGTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp GTGAGGAACTGGAGTGGCCGAGTTCGCCAAGGCGCCGGGGACACCTaGGCAGATGAGAACTGGAGCCTCCAGCTGCTTCCAGCGAATCTA +
Preference number: 5 (lower is better)
Translates to: VRNWSGRVRQGAGDT*ADENWSLQLLPANL
Trigger: TAGATTCGCTGGAAGCAGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 90 bp AAGGCGCCGGGGACACCTGAGCAGATGAGAACTGGAGCCTCCAGCTaGTTCCAGCGAATCTACACAGGGAGCGCTCTGGGCAGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: KAPGTPEQMRTGASS*FQRIYTGSALGRFC
Trigger: ACAAAACCTGCCCAGAGCGCTCCCTGTGTAGATTCGCTGGAAGCAGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536262.3
CDS-3UTR CAA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATGCAGACCACCCCCGTaGCCACTACCGCGCCCCACA +
Preference number: 5 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLCRPPP*PLPRPT
Trigger: TGTGGGGCGCGGTAGTGGCAACGGGGGTGGTCTGCA...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATTGCAGACCACCCCCGTaGCCACTACCGCGCCCCACA +
Preference number: 5 (lower is better)
Translates to: LISQDLGWHDSHECLETYCRPPP*PLPRPT
Trigger: TGTGGGGCGCGGTAGTGGCAACGGGGGTGGTCTGCA...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCCCATCAGGAAGTCCTaGGAGGTCTGCTGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LISQDLGWHDSHECLETYPIRKS*EVCWPP
Trigger: GGGCGGCCAGCAGACCTCCAAGGACTTCCTGATGGG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 90 bp GTTGGCAAAGGGAACCAAAATGCCCAAAGCGAACAGGCCCATAAGTaGTCCACCAACCATACCAAATACGCTGAGTGCTGCCTGCAACAA +
Preference number: 5 (lower is better)
Translates to: VGKGNQNAQSEQAHK*STNHTKYAECCLQQ
Trigger: TTGTTGCAGGCAGCACTCAGCGTATTTGGTATGGTTGGTGGACCACTTATGGGCCTGTTCGCTTTGGGCATTTTGGTTCCCTTTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTTCTCTGCACCTGGGATaGGTTGACACCGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSLHLG*VDTVDA
Trigger: AGCATCTACGGTGTCAACCAATCCCAGGTGCAGAGA...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGGTGCAGACACTTTCTaGGCTGTCCAAGGATCACAG +
Preference number: 5 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLGADTF*AVQGSQ
Trigger: CTGTGATCCTTGGACAGCCAAGAAAGTGTCTGCACC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTAGCACCAAGAAGACTTaGATCATTGGGCCCACGGTC +
Preference number: 5 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSTKKT*IIGPTV
Trigger: GACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTAGTGCTGATTCCACCTaGCATCACCACAGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPSADST*HHHSLY
Trigger: ATACAGGCTGTGGTGATGCAAGGTGGAATCAGCACT...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGTCTCTGCACCTGGGATaGGTTGACACCGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLSLHLG*VDTVDA
Trigger: AGCATCTACGGTGTCAACCAATCCCAGGTGCAGAGA...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGAGCACCAAGAAGACTTaGATCATTGGGCCCACGGTC +
Preference number: 5 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLSTKKT*IIGPTV
Trigger: GACCGTGGGCCCAATGATCAAAGTCTTCTTGGTGCT...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAATCAAATCCTGTGACTaGATTCAAAGCCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLIKSCD*IQSQGR
Trigger: CCTGCCCTGGCTTTGAATCAAGTCACAGGATTTGAT...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 90 bp AGTGCTGATTCCACCTTGCATCACCACAGCCTGTATAATCACGGATaGAAATCCAGCCACCATGATCCCAACTTGAAAAACATCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SADSTLHHHSLYNHG*KSSHHDPNLKNICP
Trigger: TGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTGATTATACAGGCTGTGGTGATGCAAGGTGGAATCAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATCAACAAGTGCTCCAATaGAGTTGGCAAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYQQVLQ*SWQREP
Trigger: TGGTTCCCTTTGCCAACTCAATTGGAGCACTTGTTG...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAATTCACATGAGTGTCTaGAGACATATCCAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLIHMSV*RHIQAQ
Trigger: CTGGGCTTGGATATGTCTCAAGACACTCATGTGAAT...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTTTGATAAGCCAGGATTaGGGGTGGCATGATTCACAT +
Preference number: 5 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPLISQD*GWHDSH
Trigger: ATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp AGAGCAGCTTCACAAACGAGTCCCATTGCTCTTGCCACTCTGATCTaGGTTCAATTCAATGTGGTTGAAAGCAGGATTATCAGTTCCACC +
Preference number: 5 (lower is better)
Translates to: RAASQTSPIALATLI*VQFNVVESRIISST
Trigger: GGTGGAACTGATAATCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGTGAAGCTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATAGTGCTCCAATTGAGTaGGCAAAGGGAACCAAAATG +
Preference number: 5 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYSAPIE*AKGTKM
Trigger: CATTTTGGTTCCCTTTGCCAACTCAATTGGAGCACT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATAGACCTGTTACCTCATaGCTCCCTAAGAATGGTGTA +
Preference number: 5 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYRPVTS*LPKNGV
Trigger: TACACCATTCTTAGGGAGCAATGAGGTAACAGGTCT...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp ACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTTGATAAGCCAGGATTaGGGGTGGCATGATTCACAT +
Preference number: 5 (lower is better)
Translates to: TKKTLIIGPTVFPSQNTYLISQD*GWHDSH
Trigger: ATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA...ATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp TCAAGGTGCAATGGCAATGTTCTCTCAGGAAGTGGAGGATATATTTaGGCTCCAATTCCAACCCATAGAGAAATGGCAAATCCAGCCATC +
Preference number: 5 (lower is better)
Translates to: SRCNGNVLSGSGGYI*APIPTHREMANPAI
Trigger: GATGGCTGGATTTGCCATTTCTCTATGGGTTGGAATTGGAGCTCAAATATATCCTCCACTTCCTGAGAGAACATTGCCATTGCACCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGCACCATGATCCCAACTaGAAAAACATCTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLHHDPN*KNICPD
Trigger: ATCTGGACAGATGTTTTTCAAGTTGGGATCATGGTG...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGTGTAGAGAGACAGTTTaGCCTGGAATCTGCTTTTAC +
Preference number: 5 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLCRETV*PGICFY
Trigger: GTAAAAGCAGATTCCAGGCAAAACTGTCTCTCTACA...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CACCAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTAGATAAAAAGTCCTCTTaGGTTAGTATGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: HQEDFDHWAHGLSQPEYLDKKSS*VSMYLG
Trigger: CCCCAGATACATACTAACCAAAGAGGACTTTTTATC...TAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AACTATGTTTCCAGGCTGGACTTAAACTCTGGACCTCAAGCGATCTTCCTGCCTCAGCCAGAATACTTATaGATTACCACCTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: NYVSRLDLNSGPQAIFLPQPEYL*ITTFLI
Trigger: AATCAGGAAGGTGGTAATCAATAAGTATTCTGGCTG...AGGCAGGAAGATCGCTTGAGGTCCAGAGTTTAAGTCCAGCCTGGAAACATAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp TCCCATTGCTCTTGCCACTCTGATCTGAGTTCAATTCAATGTGGTTaGAAGCAGGATTATCAGTTCCACCATCTTCCACTGGATGTGATT +
Preference number: 5 (lower is better)
Translates to: SHCSCHSDLSSIQCG*KQDYQFHHLPLDVI
Trigger: AATCACATCCAGTGGAAGATGGTGGAACTGATAATCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 90 bp GTATCAGAGCAGCTTCACAAACGAGTCCCATTGCTCTTGCCACTCTaGTCTGAGTTCAATTCAATGTGGTTGAAAGCAGGATTATCAGTT +
Preference number: 5 (lower is better)
Translates to: VSEQLHKRVPLLLPL*SEFNSMWLKAGLSV
Trigger: AACTGATAATCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGTGAAGCTGCTCTGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATAGTGCTCCAATTGAGTaGGCAAAGGGAACCAAAATG +
Preference number: 5 (lower is better)
Translates to: LISQDLGWHDSHECLETYSAPIE*AKGTKM
Trigger: CATTTTGGTTCCCTTTGCCAACTCAATTGGAGCACT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAAGAAGACTTTGATCATTGGGCCCACGGTCTTTCCCAGCCAGAATACTTATTGGATAAAAAGTCCTCTTaGGTTAGTATGTATCTGGGG +
Preference number: 5 (lower is better)
Translates to: QEDFDHWAHGLSQPEYLLDKKSS*VSMYLG
Trigger: CCCCAGATACATACTAACCAAAGAGGACTTTTTATC...CAATAAGTATTCTGGCTGGGAAAGACCGTGGGCCCAATGATCAAAGTCTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATCCAGAAGGTGTGTCTTaGCAAAGGGTTAGGATTAAA +
Preference number: 5 (lower is better)
Translates to: LISQDLGWHDSHECLETYPEGVS*QRVRIK
Trigger: TTTAATCCTAACCCTTTGCAAAGACACACCTTCTGG...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGGGTGCAGACACTTTCTaGGCTGTCCAAGGATCACAG +
Preference number: 5 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRGADTF*AVQGSQ
Trigger: CTGTGATCCTTGGACAGCCAAGAAAGTGTCTGCACC...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp TTGATAAGCCAGGATTTGGGGTGGCATGATTCACATGAGTGTCTTGAGACATATACAATAAAACCCAAGTaGATAGGTCAGAAACTGGGC +
Preference number: 5 (lower is better)
Translates to: LISQDLGWHDSHECLETYTIKPK*IGQKLG
Trigger: GCCCAGTTTCTGACCTATCAACTTGGGTTTTATTGT...ATATGTCTCAAGACACTCATGTGAATCATGCCACCCCAAATCCTGGCTTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATAGTGCTGATTCCACCTaGCATCACCACAGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: EGNVNARILNSRVTSINDSADST*HHHSLY
Trigger: ATACAGGCTGTGGTGATGCAAGGTGGAATCAGCACT...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGATCAAATCCTGTGACTaGATTCAAAGCCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILIKSCD*IQSQGR
Trigger: CCTGCCCTGGCTTTGAATCAAGTCACAGGATTTGAT...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCACCACACTCATTCCTaGGGAAATCCAAGACAGAGA +
Preference number: 5 (lower is better)
Translates to: EGNVNARILNSRVTSINDHHTHS*GNPRQR
Trigger: TCTCTGTCTTGGATTTCCCAAGGAATGAGTGTGGTG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCACCACACTCATTCCTaGGGAAATCCAAGACAGAGA +
Preference number: 5 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRHHTHS*GNPRQR
Trigger: TCTCTGTCTTGGATTTCCCAAGGAATGAGTGTGGTG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCAACAAGTGCTCCAATaGAGTTGGCAAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRQQVLQ*SWQREP
Trigger: TGGTTCCCTTTGCCAACTCAATTGGAGCACTTGTTG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATAGACCTGTTACCTCATaGCTCCCTAAGAATGGTGTA +
Preference number: 5 (lower is better)
Translates to: EGNVNARILNSRVTSINDRPVTS*LPKNGV
Trigger: TACACCATTCTTAGGGAGCAATGAGGTAACAGGTCT...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTACAATAAAACCCAAGTaGATAGGTCAGAAACTGGGC +
Preference number: 5 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFTIKPK*IGQKLG
Trigger: GCCCAGTTTCTGACCTATCAACTTGGGTTTTATTGT...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGATTCACATGAGTGTCTaGAGACATATCCAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRIHMSV*RHIQAQ
Trigger: CTGGGCTTGGATATGTCTCAAGACACTCATGTGAAT...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATCACCATGATCCCAACTaGAAAAACATCTGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: EGNVNARILNSRVTSINDHHDPN*KNICPD
Trigger: ATCTGGACAGATGTTTTTCAAGTTGGGATCATGGTG...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp AAAATTATGAAGACAAGCTCAGTTAGAGTGCACAATAAAACCCAAGTTGATAGGCCAGAAGGTGTGTCTTaGCAAAGGGTTAGGATTAAA +
Preference number: 5 (lower is better)
Translates to: KIMKTSSVRVHNKTQVDRPEGVS*QRVRIK
Trigger: TTTAATCCTAACCCTTTGCAAAGACACACCTTCTGG...CCTATCAACTTGGGTTTTATTGTGCACTCTAACTGAGCTTGTCTTCATAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGTGTAGAGAGACAGTTTaGCCTGGAATCTGCTTTTAC +
Preference number: 5 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILCRETV*PGICFY
Trigger: GTAAAAGCAGATTCCAGGCAAAACTGTCTCTCTACA...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GATGTTGGCAAACTTCCAAACTTATATGCTAGCACCAAGGCATGGAAAATATTTCAGCCAGAATACTTATaGATTACCACCTTCCTGATT +
Preference number: 5 (lower is better)
Translates to: DVGKLPNLYASTKAWKIFQPEYL*ITTFLI
Trigger: AATCAGGAAGGTGGTAATCAATAAGTATTCTGGCTG...AAATATTTTCCATGCCTTGGTGCTAGCATATAAGTTTGGAAGTTTGCCAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp GAGGGAAATGTCAATGCCAGAATTCTAAACTCCAGAGTAACATCAATTAATGATTGGTTGTCATCAAATTaGTCTCATTGTAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EGNVNARILNSRVTSINDWLSSN*SHCRCC
Trigger: ACAGCACCTACAATGAGACAAATTTGATGACAACCA...ATCATTAATTGATGTTACTCTGGAGTTTAGAATTCTGGCATTGACATTTCCCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS-3UTR CAA 90 bp CAACTTAATAGCATTAAGTGTAGTCATCTAACTCCATGGAGCTTAACCATTTTGTGGTTGTCATCAAATTaGTCTCATTGTAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QLNSIKCSHLTPWSLTILWLSSN*SHCRCC
Trigger: ACAGCACCTACAATGAGACAAATTTGATGACAACCA...CAAAATGGTTAAGCTCCATGGAGTTAGATGACTACACTTAATGCTATTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp GATGCCCCGTGGCGTGTCCATGGCCGCACGGTCGCCTaGGCCCTGCGCGCAAACTGGTGGCCCCGCGGCGCG +
Preference number: 6 (lower is better)
Translates to: DAPWRVHGRTVA*ALRANWWPRGA
Trigger: CGCGCCGCGGGGCCACCAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp GCCGGAGCCCGGCGCGCACTTCTTATCCCGGATCCCTaGCGCGCAGGCGTGGCGTCCCGCGGGGACTGGAGG +
Preference number: 6 (lower is better)
Translates to: AGARRALLIPDP*RAGVASRGDWR
Trigger: CCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAGAAGTGCGCGCCGGGCTCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp GATCCCTGGCGCGCAGGCGTGGCGTCCCGCGGGGACTaGAGGCGTCCTCCAGGTGTCGGCCTCCGAACGCAC +
Preference number: 6 (lower is better)
Translates to: DPWRAGVASRGD*RRPPGVGLRTH
Trigger: GTGCGTTCGGAGGCCGACACCTGGAGGACGCCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp GCGCACTTCTTATCCCGGATCCCTGGCGCGCAGGCGTaGCGTCCCGCGGGGACTGGAGGCGTCCTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: AHFLSRIPGAQA*RPAGTGGVLQV
Trigger: CACCTGGAGGACGCCTCCAGTCCCCGCGGGACGCCACGCCTGCGCGCCAGGGATCCGGGATAAGAAGTGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp CGACCCGCTGCCCTGAGTGCTCACCACGTGAGGAACTaGAGTGGCCGAGTTCGCCAAGGCGCCGGGGACACC +
Preference number: 6 (lower is better)
Translates to: RPAALSAHHVRN*SGRVRQGAGDT
Trigger: GGTGTCCCCGGCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp CCCGCCGCTGCGAGCCGCGCCCCTCAAACCCAGGTATaGGACCTCGGAAAATCGACCCGCTGCCCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: PAAASRAPQTQV*DLGKSTRCPEC
Trigger: GCACTCAGGGCAGCGGGTCGATTTTCCGAGGTCCCATACCTGGGTTTGAGGGGCGCGGCTCGCAGCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp ACACCACGAAGGTGCCGATGCCCCGTGGCGTGTCCATaGCCGCACGGTCGCCTGAGCCCTGCGCGCAAACTG +
Preference number: 6 (lower is better)
Translates to: TPRRCRCPVACP*PHGRLSPARKL
Trigger: CAGTTTGCGCGCAGGGCTCAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTCGTGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 72 bp CGAACACCACGTAGTCCCACACCACGAAGGTGCCGATaGCCCGTGGCGTGTCCATGGCCGCACGGTCGCCTG +
Preference number: 6 (lower is better)
Translates to: RTPRSPTPRRCR*PVACPWPHGRL
Trigger: CAGGCGACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGGACTACGTGGTGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 72 bp TGCCCGCGAACACCACGTAGTCCCACACCACGAAGGTaGCGATGCCCCGTGGCGTGTCCATGGCCGCACGGT +
Preference number: 6 (lower is better)
Translates to: CPRTPRSPTPRR*RCPVACPWPHG
Trigger: ACCGTGCGGCCATGGACACGCCACGGGGCATCGGCACCTTCGTGGTGTGGGACTACGTGGTGTTCGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp CGCTGCCCTGAGTGCTCACCACGTGAGGAACTGGAGTaGCCGAGTTCGCCAAGGCGCCGGGGACACCTGAGC +
Preference number: 6 (lower is better)
Translates to: RCPECSPREELE*PSSPRRRGHLS
Trigger: GCTCAGGTGTCCCCGGCGCCTTGGCGAACTCGGCCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp CTGCGGTCATTCTGCGGCCGCCCATCAGGAAGTCCTTaGAGGTCTGCTGGCCGCCCCCAGCGAAGGCGTAGT +
Preference number: 6 (lower is better)
Translates to: LRSFCGRPSGSP*RSAGRPQRRRS
Trigger: ACTACGCCTTCGCTGGGGGCGGCCAGCAGACCTCCAAGGACTTCCTGATGGGCGGCCGCAGAATGACCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp CCGAGTTCGCCAAGGCGCCGGGGACACCTGAGCAGATaGGAACTGGAGCCTCCAGCTGCTTCCAGCGAATCT +
Preference number: 6 (lower is better)
Translates to: PSSPRRRGHLSR*ELEPPAASSES
Trigger: AGATTCGCTGGAAGCAGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCCCCGGCGCCTTGGCGAACTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp CAGCGAAGGCGTAGTAGATGCCGATGGCGGCCGAGATaGCCAGCATGCCCGCGAACACCACGTAGTCCCACA +
Preference number: 6 (lower is better)
Translates to: QRRRSRCRWRPR*PACPRTPRSPT
Trigger: TGTGGGACTACGTGGTGTTCGCGGGCATGCTGGTCATCTCGGCCGCCATCGGCATCTACTACGCCTTCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 72 bp GGGACACCTGAGCAGATGAGAACTGGAGCCTCCAGCTaGTTCCAGCGAATCTACACAGGGAGCGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: GTPEQMRTGASS*FQRIYTGSALG
Trigger: GCCCAGAGCGCTCCCTGTGTAGATTCGCTGGAAGCAGCTGGAGGCTCCAGTTCTCATCTGCTCAGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536262.3
CDS GCA 72 bp GTATGGGACCTCGGAAAATCGACCCGCTGCCCTGAGTaGTCACCACGTGAGGAACTGGAGTGGCCGAGTTCG +
Preference number: 6 (lower is better)
Translates to: VWDLGKSTRCPE*SPREELEWPSS
Trigger: CGAACTCGGCCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCCGAGGTCCCATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 72 bp CAAACCCAGGTATGGGACCTCGGAAAATCGACCCGCTaGCCTGAGTGCTCACCACGTGAGGAACTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: QTQVWDLGKSTR*PECSPREELEW
Trigger: CCACTCCAGTTCCTCACGTGGTGAGCACTCAGGGCAGCGGGTCGATTTTCCGAGGTCCCATACCTGGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp TACGCTGAGTGCTGCCTGCAACAAAGCTCCCATAAGTaGCGCCAGCGCAGCCATTCCAATACACAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: YAECCLQQSSHK*RQRSHSNTQGS
Trigger: GGAGCCCTGTGTATTGGAATGGCTGCGCTGGCGTCACTTATGGGAGCTTTGTTGCAGGCAGCACTCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp GGGAACCAAAATGCCCAAAGCGAACAGGCCCATAAGTaGTCCACCAACCATACCAAATACGCTGAGTGCTGC +
Preference number: 6 (lower is better)
Translates to: GNQNAQSEQAHK*STNHTKYAECC
Trigger: GCAGCACTCAGCGTATTTGGTATGGTTGGTGGACCACTTATGGGCCTGTTCGCTTTGGGCATTTTGGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp CTTTCTTGGCTGTCCAAGGATCACAGTCATGGTACCTaGAATATAGGGCGAGCCCACAAAACACTGAGCATG +
Preference number: 6 (lower is better)
Translates to: LSWLSKDHSHGT*NIGRAHKTLSM
Trigger: CATGCTCAGTGTTTTGTGGGCTCGCCCTATATTCCAGGTACCATGACTGTGATCCTTGGACAGCCAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CAA 90 bp TGCCTGGAATCTGCTTTTACAAGAAATATATCTCTGCACCTGGGATaGGTTGACACCGTAGATGCTGGTCCATGTGAAGGTCCCTCCTAT +
Preference number: 6 (lower is better)
Translates to: CLESAFTRNISLHLG*VDTVDAGPCEGPSY
Trigger: ATAGGAGGGACCTTCACATGGACCAGCATCTACGGTGTCAACCAATCCCAGGTGCAGAGATATATTTCTTGTAAAAGCAGATTCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS GCA 72 bp TCCACCTTGCATCACCACAGCCTGTATAATCACGGATaGAAATCCAGCCACCATGATCCCAACTTGAAAAAC +
Preference number: 6 (lower is better)
Translates to: STLHHHSLYNHG*KSSHHDPNLKN
Trigger: GTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTGATTATACAGGCTGTGGTGATGCAAGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp CAGCTTCACAAACGAGTCCCATTGCTCTTGCCACTCTaGTCTGAGTTCAATTCAATGTGGTTGAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: QLHKRVPLLLPL*SEFNSMWLKAG
Trigger: TCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGTGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CAA 90 bp TGTGGTTGTCATCAAATTTGTCTCATTGTAGGTGCTGTTACAGCCTaGGATATCAAGGTGCAATGGCAATGTTCTCTCAGGAAGTGGAGG +
Preference number: 6 (lower is better)
Translates to: CGCHQICLIVGAVTA*DIKVQWQCSLRKWR
Trigger: CCTCCACTTCCTGAGAGAACATTGCCATTGCACCTTGATATCCAAGGCTGTAACAGCACCTACAATGAGACAAATTTGATGACAACCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp GTAGGTGCTGTTACAGCCTTGGATATCAAGGTGCAATaGCAATGTTCTCTCAGGAAGTGGAGGATATATTTG +
Preference number: 6 (lower is better)
Translates to: VGAVTALDIKVQ*QCSLRKWRIYL
Trigger: CAAATATATCCTCCACTTCCTGAGAGAACATTGCCATTGCACCTTGATATCCAAGGCTGTAACAGCACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CAA 72 bp TCTGCTTTTACAAGAAATATATCTCTGCACCTGGGATaGGTTGACACCGTAGATGCTGGTCCATGTGAAGGT +
Preference number: 6 (lower is better)
Translates to: SAFTRNISLHLG*VDTVDAGPCEG
Trigger: ACCTTCACATGGACCAGCATCTACGGTGTCAACCAATCCCAGGTGCAGAGATATATTTCTTGTAAAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp ATCACGGATGCAAATCCAGCCACCATGATCCCAACTTaGAAAACATCTGTCCAGATAACTGCTTTAAGACCA +
Preference number: 6 (lower is better)
Translates to: ITDANPATMIPT*KTSVQITALRP
Trigger: TGGTCTTAAAGCAGTTATCTGGACAGATGTTTTTCAAGTTGGGATCATGGTGGCTGGATTTGCATCCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp TCTTGCCACTCTGATCTGAGTTCAATTCAATGTGGTTaGAAGCAGGATTATCAGTTCCACCATCTTCCACTG +
Preference number: 6 (lower is better)
Translates to: SCHSDLSSIQCG*KQDYQFHHLPL
Trigger: CAGTGGAAGATGGTGGAACTGATAATCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS TCA 72 bp TCACAAACGAGTCCCATTGCTCTTGCCACTCTGATCTaGGTTCAATTCAATGTGGTTGAAAGCAGGATTATC +
Preference number: 6 (lower is better)
Translates to: SQTSPIALATLI*VQFNVVESRII
Trigger: GATAATCCTGCTTTCAACCACATTGAATTGAACTCAGATCAGAGTGGCAAGAGCAATGGGACTCGTTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CCA 72 bp AATTGGATAAAAAGTCCTCTTTGGTTAGTATGTATCTaGGGTCTAAGTTCTGTTTTCTTCCTCCTGTTGATA +
Preference number: 6 (lower is better)
Translates to: NWIKSPLWLVCI*GLSSVFFLLLI
Trigger: TATCAACAGGAGGAAGAAAACAGAACTTAGACCCCAGATACATACTAACCAAAGAGGACTTTTTATCCAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3
CDS CAA 72 bp GTTATCCATCAGTGGAGTCCTTTGAACATTGTATATTaGAAAAACACTAGTAGTAAATGGCATTTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: VIHQWSPLNIVY*KNTSSKWHFCG
Trigger: ACCACAGAAATGCCATTTACTACTAGTGTTTTTCAAATATACAATGTTCAAAGGACTCCACTGATGGATAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536262.3
ENST00000572861.3