RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC5A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000198743

Ensembl transcript IDs: ENST00000381151.5

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAAAGGTCTTGTATACATCTCTCTATCCAAACCTAGGAAACAGTaGGGTGTCACCACCAACGACCCATGTGATCCCTTTCCAGTCATC +
Preference number: 1 (lower is better)
Translates to: RKGLVYISLSKPRKQ*GVTTNDPCDPFPVI
Trigger: GATGACTGGAAAGGGATCACATGGGTCGTTGGTGGTGACACCTCACTGTTTCCTAGGTTTGGATAGAGAGATGTATACAAGACCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 90 bp TTAAAATGTGAAGTTTCACAGAGTGATGGGTCCCAGCTAATTTCTTaGGGTATCATCCCTAAGAGCTATGGCTACATGACCCTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LKCEVSQSDGSQLIS*GIIPKSYGYMTLAR
Trigger: CCTGGCCAGGGTCATGTAGCCATAGCTCTTAGGGATGATACCTCAAGAAATTAGCTGGGACCCATCACTCTGTGAAACTTCACATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp GCAACTCTGAGACAAATACCTGGTGGCCTTTATGACTGGCACTTGTaGGATACAGAGAATACTATTAGTCTTGTGCTTTCTATGTGTGGG +
Preference number: 1 (lower is better)
Translates to: ATLRQIPGGLYDWHL*DTENTISLVLSMCG
Trigger: CCCACACATAGAAAGCACAAGACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTATTTGTCTCAGAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 90 bp GTAAATCCCTGCTCTATTTCTGAACTCTGCTGGCAATCTATAAACTaGAGCAGTAACAGTGGGGGAAAGCAAGGGAACAAATTCCATACC +
Preference number: 1 (lower is better)
Translates to: VNPCSISELCWQSIN*SSNSGGKQGNKFHT
Trigger: GGTATGGAATTTGTTCCCTTGCTTTCCCCCACTGTTACTGCTTCAGTTTATAGATTGCCAGCAGAGTTCAGAAATAGAGCAGGGATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp GTCAGAGGGGAAGATCCATATGCCTACTATAAAGAAAATGAGCCATaGACTGCGAATACAGACACACTCTATTGGCTCTCACAAGAGTTA +
Preference number: 1 (lower is better)
Translates to: VRGEDPYAYYKENEP*TANTDTLYWLSQEL
Trigger: TAACTCTTGTGAGAGCCAATAGAGTGTGTCTGTATTCGCAGTCCATGGCTCATTTTCTTTATAGTAGGCATATGGATCTTCCCCTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp GTGCTCATAGCAACTCTGAGACAAATACCTGGTGGCCTTTATGACTaGCACTTGTGGGATACAGAGAATACTATTAGTCTTGTGCTTTCT +
Preference number: 1 (lower is better)
Translates to: VLIATLRQIPGGLYD*HLWDTENTISLVLS
Trigger: AGAAAGCACAAGACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTATTTGTCTCAGAGTTGCTATGAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp TTTGGGTCCCTTACCATTAGGACCAGTTTAGATACCGCATTGTCTTaGGCTTATCAATACTGTAGTGCTCATAGCAACTCTGAGACAAAT +
Preference number: 1 (lower is better)
Translates to: FGSLTIRTSLDTALS*AYQYCSAHSNSETN
Trigger: ATTTGTCTCAGAGTTGCTATGAGCACTACAGTATTGATAAGCCCAAGACAATGCGGTATCTAAACTGGTCCTAATGGTAAGGGACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 90 bp AATCTGAGACCACTGTGTTTTGTCTTGATTTGCTCGCTCTTCAGCTaGTTACTTTATTCTAGCATCCTTTCTCTTCAAGCAAGCTGTGAA +
Preference number: 1 (lower is better)
Translates to: NLRPLCFVLICSLFS*LLYSSILSLQASCE
Trigger: TTCACAGCTTGCTTGAAGAGAAAGGATGCTAGAATAAAGTAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGGTCTCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 90 bp TCCCACACTACGAAAAATCTGAGACCACTGTGTTTTGTCTTGATTTaGTCGCTCTTCAGCTGCTTACTTTATTCTAGCATCCTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: SHTTKNLRPLCFVLI*SLFSCLLYSSILSL
Trigger: AAGAGAAAGGATGCTAGAATAAAGTAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGGTCTCAGATTTTTCGTAGTGTGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 90 bp GAGCAAATCTTCTACTTCAGGGTAAGGTCTGCCAAGACTTGGCAGTaGAGACAGTATACCTTAATTCATGGTAACTTAACATATATTCTG +
Preference number: 1 (lower is better)
Translates to: EQIFYFRVRSAKTWQ*RQYTLIHGNLTYIL
Trigger: CAGAATATATGTTAAGTTACCATGAATTAAGGTATACTGTCTGCACTGCCAAGTCTTGGCAGACCTTACCCTGAAGTAGAAGATTTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp GCTGGTTATATTATGGAATACCATATATACTGGCCTTTGCCAGTTTaGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTA +
Preference number: 1 (lower is better)
Translates to: AGYIMEYHIYWPLPV*DFCNSNKPRFCFQL
Trigger: TAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAATATAACCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 90 bp CCAGGAACAATCATTCTAATGAAATATAGATTGAAGACTGGTCCCTaGATTAAGTTGCAATCAGCAATTCACAAACTTACTCGAGCACAT +
Preference number: 1 (lower is better)
Translates to: PGTIILMKYRLKTGP*IKLQSAIHKLTRAH
Trigger: ATGTGCTCGAGTAAGTTTGTGAATTGCTGATTGCAACTTAATTCAGGGACCAGTCTTCAATCTATATTTCATTAGAATGATTGTTCCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 90 bp TTGACATTTATATTCTCTCCCTCCATCAATGTGGTACAAACTTATTaGGATTATTCCTTTGGGTCCCTTACCATTAGGACCAGTTTAGAT +
Preference number: 1 (lower is better)
Translates to: LTFIFSPSINVVQTY*DYSFGSLTIRTSLD
Trigger: ATCTAAACTGGTCCTAATGGTAAGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAGAATATAAATGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp TGTGAACACGATTTTGTGCTTTCTATGGACTTTAGCTTTCTATCATaGAATATAAACTGTTGTCACGTACCTGTTCTCGATATACCTATC +
Preference number: 1 (lower is better)
Translates to: CEHDFVLSMDFSFLS*NINCCHVPVLDIPI
Trigger: GATAGGTATATCGAGAACAGGTACGTGACAACAGTTTATATTCCATGATAGAAAGCTAAAGTCCATAGAAAGCACAAAATCGTGTTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp ACCCAGGTAACCAAATTTAAGAGTCATTACATAAAGTACAGTTATTaGTTTAAGTCAATAGCCTCAGACTATGTATGGTACTGCCCAAAA +
Preference number: 1 (lower is better)
Translates to: TQVTKFKSHYIKYSY*FKSIASDYVWYCPK
Trigger: TTTTGGGCAGTACCATACATAGTCTGAGGCTATTGACTTAAACCAATAACTGTACTTTATGTAATGACTCTTAAATTTGGTTACCTGGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 90 bp AAGGCACTAATCCAAACACATAAATTTCAAAAGCTGGTTATATTATaGAATACCATATATACTGGCCTTTGCCAGTTTGGGATTTCTGCA +
Preference number: 1 (lower is better)
Translates to: KALIQTHKFQKLVIL*NTIYTGLCQFGISA
Trigger: TGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAATATAACCAGCTTTTGAAATTTATGTGTTTGGATTAGTGCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTAGAGCTATGGCTACATaGCCCTGGCCAGGCTCTTTG +
Preference number: 2 (lower is better)
Translates to: IPGGLYDWHLWDTENTISRAMAT*PWPGSL
Trigger: CAAAGAGCCTGGCCAGGGTCATGTAGCCATAGCTCT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCCTGTACCCACTAGCTaGAAGTGGGTGCCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLPVPTS*KWVPSH
Trigger: ATGGCTTGGCACCCACTTGCAGCTAGTGGGTACAGG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTACCTGGTGGCCTTTATaGCTGGCACTTGTGGGATAC +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPTWWPL*LALVGY
Trigger: GTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGT...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCTTCAGGGTAAGGTCTaGCAAGACTTGGCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKLQGKV*QDLAVQ
Trigger: CTGCACTGCCAAGTCTTGGCAGACCTTACCCTGAAG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp TGCGAATACAGACACACTCTATTGGCTCTCACAAGAGTTAACCCCTaGCTTAGCCTCAAGTTACAGAAGTGCATAACAACCCCCTCAACT +
Preference number: 2 (lower is better)
Translates to: CEYRHTLLALTRVNP*LSLKLQKCITTPST
Trigger: AGTTGAGGGGGTTGTTATGCACTTCTGTAACTTGAGGCTAAGCAAGGGGTTAACTCTTGTGAGAGCCAATAGAGTGTGTCTGTATTCGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGTTGGGGATACCTACTaGCAACTTGTGCGGTTGTCG +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARVGDTY*QLVRLS
Trigger: CGACAACCGCACAAGTTGGCAGTAGGTATCCCCAAC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCCACTAGCTGCAAGTaGGTGCCAAGCCATGTCAAG +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPTSCK*VPSHVK
Trigger: CTTGACATGGCTTGGCACCCACTTGCAGCTAGTGGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTTACCGACGGCCAGTTTaGACTGAAACATCCTTATGC +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPYRRPV*TETSLC
Trigger: GCATAAGGATGTTTCAGTGCAAACTGGCCGTCGGTA...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTGGCCTTTGCCAGTTTaGGATTTCTGCAATAGCAAT +
Preference number: 2 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSWPLPV*DFCNSN
Trigger: ATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp TATTCCTTTGGGTCCCTTACCATTAGGACCAGTTTAGATACCGCATaGTCTTGGGCTTATCAATACTGTAGTGCTCATAGCAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: YSFGSLTIRTSLDTA*SWAYQYCSAHSNSE
Trigger: CTCAGAGTTGCTATGAGCACTACAGTATTGATAAGCCCAAGACAATGCGGTATCTAAACTGGTCCTAATGGTAAGGGACCCAAAGGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGGACAAAGGACAGTGTTaGGCATACGAAGACACAGAA +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKDKGQC*AYEDTE
Trigger: TTCTGTGTCTTCGTATGCTCAACACTGTCCTTTGTC...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCATCTGAACAAACCATaGGTCCAGATTTGGAGACCT +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHLNKP*VQIWRP
Trigger: AGGTCTCCAAATCTGGACTCATGGTTTGTTCAGATG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGTTGTCCAGACACATCTaGACAAACCATGAGTCCAGA +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKLSRHI*TNHESR
Trigger: TCTGGACTCATGGTTTGTTCAGATGTGTCTGGACAA...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCTTCTCATCAGATCTTaGGATGAAAATTGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSLLIRS*DENCLR
Trigger: TCTCAGGCAATTTTCATCTCAAGATCTGATGAGAAG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAACAGGCCACACCAAATaGTATTCAAAGTCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARTGHTK*YSKSEG
Trigger: CCCCTCTGACTTTGAATATCATTTGGTGTGGCCTGT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGTGTTTCTCTGCACTCTaGCACCATCATTTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKCFSAL*HHHFKG
Trigger: CCCTTTGAAATGATGGTGTCAGAGTGCAGAGAAACA...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCTACAGCGTAAACAATaGCTGAGAGATGCACAGTTA +
Preference number: 2 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSLQRKQ*LRDAQL
Trigger: TAACTGTGCATCTCTCAGGCATTGTTTACGCTGTAG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTAGGACACAGCACCATTaGTATTGCTTGATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: IPGGLYDWHLWDTENTISRTQHH*YCLMLL
Trigger: GAGAAGCATCAAGCAATAGCAATGGTGCTGTGTCCT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACCTACTGCCAACTTGTaGGGTTGTCGAATTCACTGT +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARPTANL*GCRIHC
Trigger: ACAGTGAATTCGACAACCGCACAAGTTGGCAGTAGG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAAGGTCTGCCAAGACTTaGCAGTGCAGACAGTATACC +
Preference number: 2 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQRSAKT*QCRQYT
Trigger: GGTATACTGTCTGCACTGCCAAGTCTTGGCAGACCT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCACTGCTTAGGGGGCTaGTCATTTCCAAACTATATA +
Preference number: 2 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSHCLGG*SFPNYI
Trigger: TATATAGTTTGGAAATGACCAGCCCCCTAAGCAGTG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTGACATATCTTCCAACTaGATCCACCTAGGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPDISSN*IHLGRH
Trigger: ATGCCTTCCTAGGTGGATCCAGTTGGAAGATATGTC...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTTCCTTCATCTTTCATaGAGGACAAAGGACAGTGTT +
Preference number: 2 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSFLHLS*RTKDSV
Trigger: AACACTGTCCTTTGTCCTCCATGAAAGATGAAGGAA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCAAGTGTTTACTCTCTaGGGGTGGCAGAACAGAATA +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKQVFTL*GWQNRI
Trigger: TATTCTGTTCTGCCACCCCCAGAGAGTAAACACTTG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTGTGGGACTCACCACTaGCAAAGCCAGTTAATTACT +
Preference number: 2 (lower is better)
Translates to: IPGGLYDWHLWDTENTISCGTHH*QSQLIT
Trigger: AGTAATTAACTGGCTTTGCCAGTGGTGAGTCCCACA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp CACTGTTCCCACACTACGAAAAATCTGAGACCACTGTGTTTTGTCTaGATTTGCTCGCTCTTCAGCTGCTTACTTTATTCTAGCATCCTT +
Preference number: 2 (lower is better)
Translates to: HCSHTTKNLRPLCFV*ICSLFSCLLYSSIL
Trigger: AAGGATGCTAGAATAAAGTAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGGTCTCAGATTTTTCGTAGTGTGGGAACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTAGCGTAAACAATGCCTaGGAGATGCACAGTTACATA +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLSVNNA*EMHSYI
Trigger: TATGTAACTGTGCATCTCTCAGGCATTGTTTACGCT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAATGAACCTGGCAAATaGACTTGTCCTGAAACAAGT +
Preference number: 2 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSNEPGK*TCPETS
Trigger: ACTTGTTTCAGGACAAGTTCATTTGCCAGGTTCATT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGGCACCTCTCAAACATaGTATCCATCCTACAGAAAG +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARGTSQT*YPSYRK
Trigger: CTTTCTGTAGGATGGATAGCATGTTTGAGAGGTGCC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCTCAAGTTACAGAAGTaGATAACAACCCCCTCAACT +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPLKLQK*ITTPST
Trigger: AGTTGAGGGGGTTGTTATGCACTTCTGTAACTTGAG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCAAGAGTTAACCCCTTaGTTAGCCTCAAGTTACAGA +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPQELTP*LASSYR
Trigger: TCTGTAACTTGAGGCTAAGCAAGGGGTTAACTCTTG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCCAGTTTGGGATTTCTaGAATAGCAATAAGCCTCGT +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKPVWDF*NSNKPR
Trigger: ACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTATATATACTGGCCTTTaGCAGTTTGGGATTTCTGCA +
Preference number: 2 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSIYTGL*QFGISA
Trigger: TGCAGAAATCCCAAACTGGCAAAGGCCAGTATATAT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp GTAATACCCTCCACAAGACACACTACTAACCCCAAAAGTTCTTGTTaGGCACCTCTCAAACATGCTATCCATCCTACAGAAAGACTATAT +
Preference number: 2 (lower is better)
Translates to: VIPSTRHTTNPKSSC*APLKHAIHPTERLY
Trigger: ATATAGTCTTTCTGTAGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGTGTGTCTTGTGGAGGGTATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp ATAGCAACTCTGAGACAAATACCTGGTGGCCTTTATGACTGGCACTaGTGGGATACAGAGAATACTATTAGTCTTGTGCTTTCTATGTGT +
Preference number: 2 (lower is better)
Translates to: IATLRQIPGGLYDWH*WDTENTISLVLSMC
Trigger: ACACATAGAAAGCACAAGACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTATTTGTCTCAGAGTTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCTCATGCTAACAAAATaGACCTGGCAAATGAACTTG +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPLMLTK*TWQMNL
Trigger: CAAGTTCATTTGCCAGGTTCATTTTGTTAGCATGAG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACAGGACAAAACATTaGCAACCATTTGTCCAGACA +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKNRTKH*QPFVQT
Trigger: TGTCTGGACAAATGGTTGTCAATGTTTTGTCCTGTT...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTAAGACAGTCCATGTATaGTCATTCCAGGAACAATCA +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLKTVHV*SFQEQS
Trigger: TGATTGTTCCTGGAATGATCATACATGGACTGTCTT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTCCCAGCTAATTTCTTaGGGTATCATCCCTAAGAGC +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYSQLIS*GIIPKS
Trigger: GCTCTTAGGGATGATACCTCAAGAAATTAGCTGGGA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTATTTATTGGTGCCCTaGTTTATATGGGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: IPGGLYDWHLWDTENTISYLLVP*FIWGGV
Trigger: AACTCCTCCCCATATAAATCAGGGCACCAATAAATA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGGCTATTATCAACACTaGAATGCCTTCAACAACCTA +
Preference number: 2 (lower is better)
Translates to: IPGGLYDWHLWDTENTISGYYQH*NAFNNL
Trigger: TAGGTTGTTGAAGGCATTTCAGTGTTGATAATAGCC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCACTGTGTTTTGTCTTaGTTTGCTCGCTCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYHCVLS*FARSSA
Trigger: AGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGGGTACACTAATGTGTaGACACGATTTTGTGCTTTC +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARGYTNV*TRFCAF
Trigger: GAAAGCACAAAATCGTGTTCACACATTAGTGTACCC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGGAAAAGGGCAATGCTaGGTAGAAGAACATACGTTT +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARGKGQC*VEEHTF
Trigger: AAACGTATGTTCTTCTACTCAGCATTGCCCTTTTCC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTTACAGGCAGACTTGTTaGTCATTTCAGTATGGTTCA +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLYRQTC*SFQYGS
Trigger: TGAACCATACTGAAATGACCAACAAGTCTGCCTGTA...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTGCCTCAGACTATGTATaGTACTGCCCAAAAAGTAAA +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPASDYV*YCPKSK
Trigger: TTTACTTTTTGGGCAGTACCATACATAGTCTGAGGC...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCAAGATAAATTAGGTTaGGGATACCTACTGCCAACT +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPQDKLG*GYLLPT
Trigger: AGTTGGCAGTAGGTATCCCCAACCTAATTTATCTTG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp GCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCTaGTGCTTTCTATGTGTGGGTACACTAATGTGTGAACACGATTTT +
Preference number: 2 (lower is better)
Translates to: AFMTGTCGIQRILLV*CFLCVGTLMCEHDF
Trigger: AAAATCGTGTTCACACATTAGTGTACCCACACATAGAAAGCACAAGACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGGAGATGAAAATTGCCTaGGAAGACAAAAGTCTAAGA +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKEMKIA*EDKSLR
Trigger: TCTTAGACTTTTGTCTTCTCAGGCAATTTTCATCTC...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGCCAAGACTTGGCAGTaGAGACAGTATACCTTAATT +
Preference number: 2 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQAKTWQ*RQYTLI
Trigger: AATTAAGGTATACTGTCTGCACTGCCAAGTCTTGGC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAGGTCCCACAAAATATaGAATAATCATCCTGCATAC +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKRSHKI*NNHPAY
Trigger: GTATGCAGGATGATTATTGCATATTTTGTGGGACCT...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCTGGCCAGGCTCTTTGTaGCAAAATACAATGGATCCT +
Preference number: 2 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTWPGSL*QNTMDP
Trigger: AGGATCCATTGTATTTTGGCACAAAGAGCCTGGCCA...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTTTAAGAACGGAAAGGTaGAAACTAGCAGAGTCAATA +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPLRTER*KLAESI
Trigger: TATTGACTCTGCTAGTTTGCACCTTTCCGTTCTTAA...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAAAACATTCTTTCTTTaGGAAATCAGAATCCGTAGG +
Preference number: 2 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSKTFFL*EIRIRR
Trigger: CCTACGGATTCTGATTTCCCAAAGAAAGAATGTTTT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCATTCCATATACTGGTaGTACAAAAATACCTACAGG +
Preference number: 2 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHSIYW*YKNTYR
Trigger: CCTGTAGGTATTTTTGTACCACCAGTATATGGAATG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCAGATTTGGAGACCTaGTTTCTGTTCTTCCCAAAA +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPDLET*FLFFPK
Trigger: TTTTGGGAAGAACAGAAACCAGGTCTCCAAATCTGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCTCCCTCCATCAATGTaGTACAAACTTATTGAGATT +
Preference number: 2 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKLPPSM*YKLIEI
Trigger: AATCTCAATAAGTTTGTACCACATTGATGGAGGGAG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAAAGACCAGTCTCTCTaGATGGTAAGTGGGCATATA +
Preference number: 2 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHKDQSL*MVSGHI
Trigger: TATATGCCCACTTACCATTCAGAGAGACTGGTCTTT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATAGGAGTCAAAGTAGCTaGACAGCTAAAGTATTCCAA +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYRSQSS*TAKVFQ
Trigger: TTGGAATACTTTAGCTGTTCAGCTACTTTGACTCCT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTATATTCTGCTCTAAGTaGTCTGTGAGAATAATTGGT +
Preference number: 2 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPIFCSK*SVRIIG
Trigger: ACCAATTATTCTCACAGAGCACTTAGAGCAGAATAT...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACATGGGAAGACACTATaGTACCTGACAATTTCTAAA +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARHGKTL*YLTISK
Trigger: TTTAGAAATTGTCAGGTAGCATAGTGTCTTCCCATG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACATACCAATGTAATATaGCCTTCTCATCAGATCTTG +
Preference number: 2 (lower is better)
Translates to: IFSNNVVGSFLASFLLARHTNVI*PSHQIL
Trigger: CAAGATCTGATGAGAAGGGCATATTACATTGGTATG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACACACAGACACAAGATaGTGTACCTTATGTATCTTA +
Preference number: 2 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQHTDTR*CTLCIL
Trigger: TAAGATACATAAGGTACATCATCTTGTGTCTGTGTG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCGTCCTCACCTCATTTTaGCTTTTAGCTATTCTAGTC +
Preference number: 2 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTVLTSF*LLAILV
Trigger: GACTAGAATAGCTAAAAGTCAAAATGAGGTGAGGAC...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTATATGACTACTAAGTaGATAATGGTGTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYYMTTK*IMVWDS
Trigger: TGAGTCCCACACCATTATTCACTTAGTAGTCATATA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCAAGTTAATCAAACACTaGTTAGGGGGCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTKLIKH*LGGWSF
Trigger: AAATGACCAGCCCCCTAAGCAGTGTTTGATTAACTT...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTTATCAACACTGAAATaGCTTCAACAACCTAGCATC +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYLSTLK*LQQPSI
Trigger: GATGCTAGGTTGTTGAAGGCATTTCAGTGTTGATAA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACGACTATGTATGGTACTaGCCAAAAAGTAAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHDYVWY*PKSKVH
Trigger: GTGCACTTTACTTTTTGGGCAGTACCATACATAGTC...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTGTTTTGTCTTGATTTaGTCGCTCTTCAGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSCFVLI*SLFSCL
Trigger: TAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACAACAACCTAGCATCTaGCTAATGCAAAATCTTACA +
Preference number: 2 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQQQPSI*LMQNLT
Trigger: TGTAAGATTTTGCATTAGCCAGATGCTAGGTTGTTG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTATAGTGCTTTTCAGTaGTATAGAGCAAAACCACTG +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYYSAFQ*YRAKPL
Trigger: CAGTGGTTTTGCTCTATACCACTGAAAAGCACTATA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp ATTTCAAAAGCTGGTTATATTATGGAATACCATATATACTGGCCTTaGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: ISKAGYIMEYHIYWP*PVWDFCNSNKPRFC
Trigger: ACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAATATAACCAGCTTTTGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATACTGAAACATCCTTATaGTCTAAGTCACTACAACAA +
Preference number: 2 (lower is better)
Translates to: CQFGISAIAISLVSVSNYTETSL*SKSLQQ
Trigger: TTGTTGTAGTGACTTAGAGCATAAGGATGTTTCAGT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR GCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCGTGAAAGACTATATATaGCAATGGTTAGGGTTGTTG +
Preference number: 2 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTVKDYI*QWLGLL
Trigger: CAACAACCCTAACCATTGGCATATATAGTCTTTCAC...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTTTTCTTCAGGTTTCTaGACATATCTTCCAACTGGA +
Preference number: 2 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSFSSGF*TYLPTG
Trigger: TCCAGTTGGAAGATATGTCCAGAAACCTGAAGAAAA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCAAAAGTCCTCAATACTaGGGCAAAACATCACTTTCA +
Preference number: 2 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSKSPQY*GKTSLS
Trigger: TGAAAGTGATGTTTTGCCCCAGTATTGAGGACTTTT...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCGACTATATATGCCAATaGTTAGGGTTGTTGGTTACT +
Preference number: 2 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTDYICQ*LGLLVT
Trigger: AGTAACCAACAACCCTAACCATTGGCATATATAGTC...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 90 bp CATTTATTTTTCTCTACCTTCCAAGACCAGTGTCCTCACCTCATTTaGACTTTTAGCTATTCTAGTCAATATCAAGCTTCAATTCTGAAC +
Preference number: 2 (lower is better)
Translates to: HLFFSTFQDQCPHLI*TFSYSSQYQASILN
Trigger: GTTCAGAATTGAAGCTTGATATTGACTAGAATAGCTAAAAGTCAAAATGAGGTGAGGACACTGGTCTTGGAAGGTAGAGAAAAATAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACTCTCTGAATGGTAAGTaGGCATATACACATATAGAA +
Preference number: 2 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHSLNGK*AYTHIE
Trigger: TTCTATATGTGTATATGCCCACTTACCATTCAGAGA...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp AATGAGCCATGGACTGCGAATACAGACACACTCTATTaGCTCTCACAAGAGTTAACCCCTTGCTTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: NEPWTANTDTLY*LSQELTPCLAS
Trigger: TGAGGCTAAGCAAGGGGTTAACTCTTGTGAGAGCCAATAGAGTGTGTCTGTATTCGCAGTCCATGGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGGACAAAGGACAGTGTaGAGCATACGAAGACACAGA +
Preference number: 3 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSGQRTV*SIRRHR
Trigger: TCTGTGTCTTCGTATGCTCAACACTGTCCTTTGTCC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCCACTGTGTTTTGTCTaGATTTGCTCGCTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSPLCFV*ICSLFS
Trigger: GCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp TTTCTTGAGGTATCATCCCTAAGAGCTATGGCTACATaGCCCTGGCCAGGCTCTTTGTGCCAAAATACAATG +
Preference number: 3 (lower is better)
Translates to: FLEVSSLRAMAT*PWPGSLCQNTM
Trigger: CATTGTATTTTGGCACAAAGAGCCTGGCCAGGGTCATGTAGCCATAGCTCTTAGGGATGATACCTCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp GAAGTTTCACAGAGTGATGGGTCCCAGCTAATTTCTTaGGGTATCATCCCTAAGAGCTATGGCTACATGACC +
Preference number: 3 (lower is better)
Translates to: EVSQSDGSQLIS*GIIPKSYGYMT
Trigger: GGTCATGTAGCCATAGCTCTTAGGGATGATACCTCAAGAAATTAGCTGGGACCCATCACTCTGTGAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAAAGGTCTGCCAAGACTaGGCAGTGCAGACAGTATAC +
Preference number: 3 (lower is better)
Translates to: IFSNNVVGSFLASFLLARKVCQD*AVQTVY
Trigger: GTATACTGTCTGCACTGCCAAGTCTTGGCAGACCTT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTAGAGACTTCATAACCTaGGACATGTCGCAGCCTCAA +
Preference number: 3 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLRDFIT*DMSQPQ
Trigger: TTGAGGCTGCGACATGTCCAAGGTTATGAAGTCTCT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCTTTATGACTGGCACTaGTGGGATACAGAGAATACT +
Preference number: 3 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSLYDWH*WDTENT
Trigger: AGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGGCATCAAAACTCCATaGTTTCTCTGCACTCTGACA +
Preference number: 3 (lower is better)
Translates to: IPGGLYDWHLWDTENTISGIKTP*FLCTLT
Trigger: TGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGTGTTTTGTCTTGATTaGCTCGCTCTTCAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: IPGGLYDWHLWDTENTISVFCLD*LALQLL
Trigger: AAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACAC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp TGTTACCGACGGCCAGTTTGCACTGAAACATCCTTATaGTCTAAGTCACTACAACAAAAATGTAGAGGCTGT +
Preference number: 3 (lower is better)
Translates to: CYRRPVCTETSL*SKSLQQKCRGC
Trigger: ACAGCCTCTACATTTTTGTTGTAGTGACTTAGAGCATAAGGATGTTTCAGTGCAAACTGGCCGTCGGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp CAAATCTTCTACTTCAGGGTAAGGTCTGCCAAGACTTaGCAGTGCAGACAGTATACCTTAATTCATGGTAAC +
Preference number: 3 (lower is better)
Translates to: QIFYFRVRSAKT*QCRQYTLIHGN
Trigger: GTTACCATGAATTAAGGTATACTGTCTGCACTGCCAAGTCTTGGCAGACCTTACCCTGAAGTAGAAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp GCAACTCTGAGACAAATACCTGGTGGCCTTTATGACTaGCACTTGTGGGATACAGAGAATACTATTAGTCTT +
Preference number: 3 (lower is better)
Translates to: ATLRQIPGGLYD*HLWDTENTISL
Trigger: AAGACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTATTTGTCTCAGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATATACCTACTGCCAACTaGTGCGGTTGTCGAATTCAC +
Preference number: 3 (lower is better)
Translates to: CQFGISAIAISLVSVSNYIPTAN*CGCRIH
Trigger: GTGAATTCGACAACCGCACAAGTTGGCAGTAGGTAT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAGTTTAGATACCGCATaGTCTTGGGCTTATCAATAC +
Preference number: 3 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSSLDTA*SWAYQY
Trigger: GTATTGATAAGCCCAAGACAATGCGGTATCTAAACT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp TTCTACTTCAGGGTAAGGTCTGCCAAGACTTGGCAGTaGAGACAGTATACCTTAATTCATGGTAACTTAACA +
Preference number: 3 (lower is better)
Translates to: FYFRVRSAKTWQ*RQYTLIHGNLT
Trigger: TGTTAAGTTACCATGAATTAAGGTATACTGTCTGCACTGCCAAGTCTTGGCAGACCTTACCCTGAAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp CCACTGTGTTTTGTCTTGATTTGCTCGCTCTTCAGCTaGTTACTTTATTCTAGCATCCTTTCTCTTCAAGCA +
Preference number: 3 (lower is better)
Translates to: PLCFVLICSLFS*LLYSSILSLQA
Trigger: TGCTTGAAGAGAAAGGATGCTAGAATAAAGTAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp GAAGATCCATATGCCTACTATAAAGAAAATGAGCCATaGACTGCGAATACAGACACACTCTATTGGCTCTCA +
Preference number: 3 (lower is better)
Translates to: EDPYAYYKENEP*TANTDTLYWLS
Trigger: TGAGAGCCAATAGAGTGTGTCTGTATTCGCAGTCCATGGCTCATTTTCTTTATAGTAGGCATATGGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp CTTACCATTAGGACCAGTTTAGATACCGCATTGTCTTaGGCTTATCAATACTGTAGTGCTCATAGCAACTCT +
Preference number: 3 (lower is better)
Translates to: LTIRTSLDTALS*AYQYCSAHSNS
Trigger: AGAGTTGCTATGAGCACTACAGTATTGATAAGCCCAAGACAATGCGGTATCTAAACTGGTCCTAATGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATTACAGGCAGACTTGTaGGTCATTTCAGTATGGTTC +
Preference number: 3 (lower is better)
Translates to: IFSNNVVGSFLASFLLARLQADL*VISVWF
Trigger: GAACCATACTGAAATGACCAACAAGTCTGCCTGTAA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACCCAAAAGTTCTTGTTaGGCACCTCTCAAACATGCT +
Preference number: 3 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQPKSSC*APLKHA
Trigger: AGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACACCATGAGTCCAGATTaGGAGACCTGGTTTCTGTTC +
Preference number: 3 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHTMSPD*ETWFLF
Trigger: GAACAGAAACCAGGTCTCCAAATCTGGACTCATGGT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTAAACAGGACAAAACATaGACAACCATTTGTCCAGAC +
Preference number: 3 (lower is better)
Translates to: IPGGLYDWHLWDTENTISKQDKT*TTICPD
Trigger: GTCTGGACAAATGGTTGTCAATGTTTTGTCCTGTTT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTTTTCTTAGGAAAATTTaGTCCTGGCAAGTCTCTGTA +
Preference number: 3 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPFLRKI*SWQVSV
Trigger: TACAGAGACTTGCCAGGACAAAATTTTCCTAAGAAA...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAATGGAATATAAACTGTaGTCACGTACCTGTTCTCGA +
Preference number: 3 (lower is better)
Translates to: IFSNNVVGSFLASFLLARMEYKL*SRTCSR
Trigger: TCGAGAACAGGTACGTGACAACAGTTTATATTCCAT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGTGTGGTACAAACTTATaGAGATTATTCCTTTGGGTC +
Preference number: 3 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKCGTNL*RLFLWV
Trigger: GACCCAAAGGAATAATCTCAATAAGTTTGTACCACA...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCAGGTTATAACAGCTTaGCATTATCACATGTTGCTA +
Preference number: 3 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKQVITA*HYHMLL
Trigger: TAGCAACATGTGATAATGCAAAGCTGTTATAACCTG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp ATATTCTCTCCCTCCATCAATGTGGTACAAACTTATTaGGATTATTCCTTTGGGTCCCTTACCATTAGGACC +
Preference number: 3 (lower is better)
Translates to: IFSPSINVVQTY*DYSFGSLTIRT
Trigger: GGTCCTAATGGTAAGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAGAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp TCCTATTCATTTACGCTGGATATGGAAGAGATAGGCTaGCCAGCCAATATGTCAATTATCAGTGAATTACAC +
Preference number: 3 (lower is better)
Translates to: SYSFTLDMEEIG*PANMSIISELH
Trigger: GTGTAATTCACTGATAATTGACATATTGGCTGGGCAGCCTATCTCTTCCATATCCAGCGTAAATGAATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp ACGAAAAATCTGAGACCACTGTGTTTTGTCTTGATTTaGTCGCTCTTCAGCTGCTTACTTTATTCTAGCATC +
Preference number: 3 (lower is better)
Translates to: TKNLRPLCFVLI*SLFSCLLYSSI
Trigger: GATGCTAGAATAAAGTAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGGTCTCAGATTTTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAATTCAGTCTGTTAGGTTaGGCTTCACTTAAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQFSLLG*ASLKLK
Trigger: CTTCAACTTAAGTGAAGCCAAACCTAACAGACTGAA...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCACTTTACAGGCAGACTaGTTGGTCATTTCAGTATGG +
Preference number: 3 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSTLQAD*LVISVW
Trigger: CCATACTGAAATGACCAACAAGTCTGCCTGTAAAGT...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp TCTCTACCTTCCAAGACCAGTGTCCTCACCTCATTTTaGCTTTTAGCTATTCTAGTCAATATCAAGCTTCAA +
Preference number: 3 (lower is better)
Translates to: SLPSKTSVLTSF*LLAILVNIKLQ
Trigger: TTGAAGCTTGATATTGACTAGAATAGCTAAAAGTCAAAATGAGGTGAGGACACTGGTCTTGGAAGGTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp AAAGAAAGCACTGAGAAGTATAACACAGTTCATACATaGTTGCCAACATGGGTCTGGACAAAAGAAAATGGG +
Preference number: 3 (lower is better)
Translates to: KESTEKYNTVHT*LPTWVWTKENG
Trigger: CCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTATGAACTGTGTTATACTTCTCAGTGCTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR GCA 72 bp TACCATATATACTGGCCTTTGCCAGTTTGGGATTTCTaGAATAGCAATAAGCCTCGTTTCTGTTTCCAATTA +
Preference number: 3 (lower is better)
Translates to: YHIYWPLPVWDF*NSNKPRFCFQL
Trigger: TAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp ATTATGGAATACCATATATACTGGCCTTTGCCAGTTTaGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGT +
Preference number: 3 (lower is better)
Translates to: IMEYHIYWPLPV*DFCNSNKPRFC
Trigger: ACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR TCA 72 bp CTCAAACATGCTATCCATCCTACAGAAAGACTATATTaGCAACCTAACAACAGCAAAGTATGCACTGAGTTT +
Preference number: 3 (lower is better)
Translates to: LKHAIHPTERLY*QPNNSKVCTEF
Trigger: AAACTCAGTGCATACTTTGCTGTTGTTAGGTTGTCAATATAGTCTTTCTGTAGGATGGATAGCATGTTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp AGTTATTGGTTTAAGTCAATAGCCTCAGACTATGTATaGTACTGCCCAAAAAGTAAAGTGCACAAGATTAGC +
Preference number: 3 (lower is better)
Translates to: SYWFKSIASDYV*YCPKSKVHKIS
Trigger: GCTAATCTTGTGCACTTTACTTTTTGGGCAGTACCATACATAGTCTGAGGCTATTGACTTAAACCAATAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTTAACAGGAAAGGTCTaGTATACATCTCTCTATCCA +
Preference number: 3 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSLTGKV*YTSLYP
Trigger: TGGATAGAGAGATGTATACAAGACCTTTCCTGTTAA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR-3UTR CAA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCAGAATACTATTAGTCTaGTGCTTTCTATGTGTGGGT +
Preference number: 3 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTRILLV*CFLCVG
Trigger: ACCCACACATAGAAAGCACAAGACTAATAGTATTCT...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CCA 72 bp TCAAAAGCTGGTTATATTATGGAATACCATATATACTaGCCTTTGCCAGTTTGGGATTTCTGCAATAGCAAT +
Preference number: 3 (lower is better)
Translates to: SKAGYIMEYHIY*PLPVWDFCNSN
Trigger: ATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAATATAACCAGCTTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGGACCCTCTGCACGATaGCTTGGTCAGCACACCAGT +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSGPSAR*LGQHTS
Trigger: ACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGCTGCAAGGACCCTCTaGACGATGACTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSAARTL*TMTWSA
Trigger: TGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCAGCAGGAACAAGGCTaGCACTGGGGGTGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSQQEQG*HWGCQV
Trigger: TACCTGACACCCCCAGTGGCAGCCTTGTTCCTGCTG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGTCTGTGTAGATCACTaGAACAAGGCCTCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSVCVDH*NKASGD
Trigger: GTCACCGGAGGCCTTGTTGCAGTGATCTACACAGAC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTAGGGGCTCACATAAATaGTCACTACTGCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSRGSHK*SLLLSP
Trigger: GGGAGAGAGCAGTAGTGATCATTTATGTGAGCCCCT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGGCATTGAATTCCCATaGGCCCACTGCAAATCCACT +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSGIEFP*AHCKST
Trigger: AGTGGATTTGCAGTGGGCGCATGGGAATTCAATGCC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCCTGTACCCACTAGCTaGAAGTGGGTGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISPVPTS*KWVPSH
Trigger: ATGGCTTGGCACCCACTTGCAGCTAGTGGGTACAGG...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCTCTGCACGATGACTTaGTCAGCACACCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSLCTMT*SAHQYH
Trigger: ATGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTCAATAAGATGGAAGTaGCATCGGGTGAGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSSIRWK*HRVRPT
Trigger: TGTTGGCCTCACCCGATGTCACTTCCATCTTATTGA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGGGTCTGCCCAAGAATaGATCCAGGCCAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISGSAQE*IQAKEH
Trigger: ATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCTTGCATCTCCACGATaGTTGGCACCCATGCTATGC +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISLASPR*LAPMLC
Trigger: GCATAGCATGGGTGCCAATCATCGTGGAGATGCAAG...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTTTGTGGGAGGTGGTGTaGGAAGGCTCACAATTACAG +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSLWEVV*EGSQLQ
Trigger: CTGTAATTGTGAGCCTTCTCACACCACCTCCCACAA...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTGTTTCTGCCTCTGAATaGCCTAAGGATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPVSASE*PKDATG
Trigger: CCCAGTGGCATCCTTAGGTCATTCAGAGGCAGAAAC...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGTCTCTTTCTCACCCATaGGAGCTGCTTGCCCATTGG +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKSLSHP*ELLAHW
Trigger: CCAATGGGCAAGCAGCTCTCATGGGTGAGAAAGAGA...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCAGAGAGGCACCAATTaGTACCCAGGTCATAGAGCG +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKQRGTN*YPGHRA
Trigger: CGCTCTATGACCTGGGTAGCAATTGGTGCCTCTCTG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGCTCACTCCCAATATTaGTCACAAACAGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSAHSQY*SQTERH
Trigger: GTGCCTCTCTGTTTGTGAGCAATATTGGGAGTGAGC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCACTGCAAATCCACTTaGAGCTCCAGATCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHCKST*SSRSCQ
Trigger: CTGGCAGGATCTGGAGCTGCAAGTGGATTTGCAGTG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCACACCAGCATGCAGTaGTCTGGGTTGATGCAAGCT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPHTSMQ*SGLMQA
Trigger: AGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCTCACCCATGAGAGCTaGTTGCCCATTGGAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPLTHES*LPIGVS
Trigger: GCTTACTCCAATGGGCAAGCAGCTCTCATGGGTGAG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCTTCAGGGTAAGGTCTaGCAAGACTTGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPLQGKV*QDLAVQ
Trigger: CTGCACTGCCAAGTCTTGGCAGACCTTACCCTGAAG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCCTACTGCCAACTTGTaGGGTTGTCGAATTCACTGT +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSPTANL*GCRIHC
Trigger: ACAGTGAATTCGACAACCGCACAAGTTGGCAGTAGG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAGGTCTGCCAAGACTTaGCAGTGCAGACAGTATACC +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSRSAKT*QCRQYT
Trigger: GGTATACTGTCTGCACTGCCAAGTCTTGGCAGACCT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACCCACTAGCTGCAAGTaGGTGCCAAGCCATGTCAAG +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARPTSCK*VPSHVK
Trigger: CTTGACATGGCTTGGCACCCACTTGCAGCTAGTGGG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTAAAGCAGTAAGGCATTaGATTCCCATGCGCCCACTG +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISKAVRH*IPMRPL
Trigger: CAGTGGGCGCATGGGAATTCAATGCCTTACTGCTTT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCAACAAGGCCTCCGGTaGCAGTCAGCAAAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYQQGLR*QSAKQS
Trigger: TGACTGCTTTGCTGACTGTCACCGGAGGCCTTGTTG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAACACCAGTACCATACTaGAGCTGGGGTCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQTPVPY*SWGLPK
Trigger: CTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGTAGAGCCTTTGGCATaGGCAATGTTTTTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSVEPLA*AMFLAA
Trigger: TGCAGCCAAAAACATTGCTCATGCCAAAGGCTCTAC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATAGAGCTATGGCTACATaGCCCTGGCCAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYRAMAT*PWPGSL
Trigger: CAAAGAGCCTGGCCAGGGTCATGTAGCCATAGCTCT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTAACACAGTTCATACATaGTTGCCAACATGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSNTVHT*LPTWVW
Trigger: CCAGACCCATGTTGGCAATCATGTATGAACTGTGTT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAATTCCCATGCGCCCACTaGAAATCCACTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQFPCAH*KSTCSS
Trigger: GGAGCTGCAAGTGGATTTGCAGTGGGCGCATGGGAA...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGATCACCACCATAAATaGCACAAATATCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSDHHHK*HKYPPH
Trigger: GTGGGGAGGATATTTGTGGCATTTATGGTGGTGATC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTTACATCTGGCCTCCTTaGATCTCCACGATGATTGGC +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPYIWPP*ISTMIG
Trigger: GCCAATCATCGTGGAGATGCAAGGAGGCCAGATGTA...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAAGGATGCCACTGGGTTaGCCTCCTCTCTGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQRMPLG*PPLCRL
Trigger: TAACCTGCAGAGAGGAGGGCAACCCAGTGGCATCCT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTACAAGTATTCAGGCATaGTATATACCCCTGACCGGA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSTSIQA*YIPLTG
Trigger: TCCGGTCAGGGGTATATACCATGCCTGAATACTTGT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGTGGGTAAGCAATATTaGAGCAACCAGCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSVGKQY*SNQLCF
Trigger: GAAGCAGAGCTGGTTGCTCCAATATTGCTTACCCAC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGGCCTATTATCAGGTTaGTCACATTCTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARGLLSG*SHSGAR
Trigger: CCGTGCCCCAGAATGTGACCAACCTGATAATAGGCC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 72 bp GGGTCCCTTACCATTAGGACCAGTTTAGATACCGCATaGTCTTGGGCTTATCAATACTGTAGTGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: GSLTIRTSLDTA*SWAYQYCSAHS
Trigger: GCTATGAGCACTACAGTATTGATAAGCCCAAGACAATGCGGTATCTAAACTGGTCCTAATGGTAAGGGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGGAAGTGACATCGGGTaGGGCCAACATGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYGSDIG*GQHVPS
Trigger: AGAAGGTACATGTTGGCCTCACCCGATGTCACTTCC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTTGTACACATCGAGGGTaGATATGGTACTGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPCTHRG*IWYWHC
Trigger: ACAGTGCCAGTACCATATTCACCCTCGATGTGTACA...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCACAAAACCAGTCTATaGACTTCCAGTACCGACCTC +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHKTSL*TSSTDL
Trigger: GAGGTCGGTACTGGAAGTTCATAGACTGGTTTTGTG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATACCTGGTGGCCTTTATaGCTGGCACTTGTGGGATAC +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYTWWPL*LALVGY
Trigger: GTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCTGTACCAACCCCGCTaGATGGCTTTCAGGATTAAA +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPLYQPR*MAFRIK
Trigger: TTTAATCCTGAAAGCCATGCAGCGGGGTTGGTACAG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGCCAGCCCAATGAAGTaGTCACTCCCAATATTGCTC +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARASPMK*SLPILL
Trigger: GAGCAATATTGGGAGTGAGCACTTCATTGGGCTGGC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTGCAGCTCCAGATCCTaGCAGCCCAATGAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSCSSRS*QPNEVL
Trigger: GAGCACTTCATTGGGCTGGCAGGATCTGGAGCTGCA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTAGCAATGTTTTTGGCTaGAAGGACCCTCTGCACGAT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISSNVFG*KDPLHD
Trigger: ATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTGATGATTGGCACCCATaGTATGCTGATCACCACCAT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLDDWHP*YADHHH
Trigger: ATGGTGGTGATCAGCATAGCATGGGTGCCAATCATC...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCAGTATCAAACGGACTaGTCCAAGAACAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLQYQTD*SKNKAS
Trigger: GCTGGCTTTGTTCTTGGAGCAGTCCGTTTGATACTG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCAAGAGTTAACCCCTTaGTTAGCCTCAAGTTACAGA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSQELTP*LASSYR
Trigger: TCTGTAACTTGAGGCTAAGCAAGGGGTTAACTCTTG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGTTGGGGATACCTACTaGCAACTTGTGCGGTTGTCG +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQVGDTY*QLVRLS
Trigger: CGACAACCGCACAAGTTGGCAGTAGGTATCCCCAAC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCATGAGCAATGTTTTTaGCTGCAAGGACCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPHEQCF*LQGPSA
Trigger: TGCAGAGGGTCCTTGCAGCCAAAAACATTGCTCATG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCATCTCCACGATGATTaGCACCCATGCTATGCTGAT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISHLHDD*HPCYAD
Trigger: ATCAGCATAGCATGGGTGCCAATCATCGTGGAGATG...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAGGTTGGTCACATTCTaGGGCACGGTAGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHRLVTF*GTVGKG
Trigger: GCCTTTGCCTACCGTGCCCCAGAATGTGACCAACCT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGAGCTGCTTGCCCATTaGAGTAAGCGTCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYELLAH*SKRQLV
Trigger: CACCAGTTGACGCTTACTCCAATGGGCAAGCAGCTC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCACTGCTTAGGGGGCTaGTCATTTCCAAACTATATA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSHCLGG*SFPNYI
Trigger: TATATAGTTTGGAAATGACCAGCCCCCTAAGCAGTG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGACATATCTTCCAACTaGATCCACCTAGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSDISSN*IHLGRH
Trigger: ATGCCTTCCTAGGTGGATCCAGTTGGAAGATATGTC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGGTGGCCTTTATGACTaGCACTTGTGGGATACAGAG +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARGGLYD*HLWDTE
Trigger: CTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 72 bp AGACACACTCTATTGGCTCTCACAAGAGTTAACCCCTaGCTTAGCCTCAAGTTACAGAAGTGCATAACAACC +
Preference number: 4 (lower is better)
Translates to: RHTLLALTRVNP*LSLKLQKCITT
Trigger: GGTTGTTATGCACTTCTGTAACTTGAGGCTAAGCAAGGGGTTAACTCTTGTGAGAGCCAATAGAGTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATGCAGTGCTCTGGGTTaGTGCAAGCTATATCATCAG +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARCSALG*CKLYHQ
Trigger: CTGATGATATAGCTTGCATCAACCCAGAGCACTGCA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTAAGACAGTCCATGTATaGTCATTCCAGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSKTVHV*SFQEQS
Trigger: TGATTGTTCCTGGAATGATCATACATGGACTGTCTT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGGCTATTATCAACACTaGAATGCCTTCAACAACCTA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSGYYQH*NAFNNL
Trigger: TAGGTTGTTGAAGGCATTTCAGTGTTGATAATAGCC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTTCCCTGCTCTATTTCTaGACTCTGCTGGCAATCTAT +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPSLLYF*TLLAIY
Trigger: ATAGATTGCCAGCAGAGTTCAGAAATAGAGCAGGGA...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACACTGAAGCTGGGGTCTaGCCAAGAATGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHTEAGV*PRMNPG
Trigger: GCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCGCGCTTCCAGAAAATTaGCAGCAGGAACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSALPEN*QQEQGC
Trigger: GCAGCCTTGTTCCTGCTGGCAATTTTCTGGAAGCGC...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTGAACGGGTAAATCCCTaGTCTATTTCTGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPERVNP*SISELC
Trigger: GCAGAGTTCAGAAATAGAGCAGGGATTTACCCGTTC...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTAAAGTCTTTGTCCTTTaGTTTGCTGTCTTGATGGTG +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSKVFVL*FAVLMV
Trigger: CACCATCAAGACAGCAAACCAAAGGACAAAGACTTT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGGCCACCAAATCGCTTaGACAAGTATTCAGGCATGG +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQGHQIA*TSIQAW
Trigger: CCATGCCTGAATACTTGTCCAAGCGATTTGGTGGCC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCCAGATTTGGAGACCTaGTTTCTGTTCTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSPDLET*FLFFPK
Trigger: TTTTGGGAAGAACAGAAACCAGGTCTCCAAATCTGG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGAATACCATATATACTaGCCTTTGCCAGTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSEYHIY*PLPVWD
Trigger: ATCCCAAACTGGCAAAGGCCAGTATATATGGTATTC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGGTGAAGTGAGGAGGTaGAAAAGGGCAATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYGEVRR*KRAMLS
Trigger: ACTCAGCATTGCCCTTTTCCACCTCCTCACTTCACC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGGATGTAAATTGGGATaGAAACCCATCCCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISGCKLG*KPIPEV
Trigger: AACTTCTGGGATGGGTTTTCATCCCAATTTACATCC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATTAACATCTTCAGGCTaGAGGCCCTTAATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARLTSSG*RPLMLS
Trigger: AGACAGCATTAAGGGCCTTCAGCCTGAAGATGTTAA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTACCATTGCTATTGCTTaGTGCTTCTCTAATCTAAAG +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSTIAIA*CFSNLK
Trigger: CTTTAGATTAGAGAAGCATCAAGCAATAGCAATGGT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATACAGGCCACACCAAATaGTATTCAAAGTCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYTGHTK*YSKSEG
Trigger: CCCCTCTGACTTTGAATATCATTTGGTGTGGCCTGT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCACCAACGACCCATGTaGTCCCTTTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTHQRPM*SLSSHH
Trigger: ATGATGACTGGAAAGGGATCACATGGGTCGTTGGTG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGGGTACACTAATGTGTaGACACGATTTTGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISGYTNV*TRFCAF
Trigger: GAAAGCACAAAATCGTGTTCACACATTAGTGTACCC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTGCCAAGACTTGGCAGTaGAGACAGTATACCTTAATT +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPAKTWQ*RQYTLI
Trigger: AATTAAGGTATACTGTCTGCACTGCCAAGTCTTGGC...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTACCGACGGCCAGTTTaGACTGAAACATCCTTATGC +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYYRRPV*TETSLC
Trigger: GCATAAGGATGTTTCAGTGCAAACTGGCCGTCGGTA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTATGGAAGAGATAGGCTaGCCAGCCAATATGTCAATT +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPMEEIG*PANMSI
Trigger: AATTGACATATTGGCTGGGCAGCCTATCTCTTCCAT...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCTCAAGTTACAGAAGTaGATAACAACCCCCTCAACT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLLKLQK*ITTPST
Trigger: AGTTGAGGGGGTTGTTATGCACTTCTGTAACTTGAG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCCAGTTTGGGATTTCTaGAATAGCAATAAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPPVWDF*NSNKPR
Trigger: ACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTTAAGAACGGAAAGGTaGAAACTAGCAGAGTCAATA +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSLRTER*KLAESI
Trigger: TATTGACTCTGCTAGTTTGCACCTTTCCGTTCTTAA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCAGTTCATACATGATTaGCAACATGGGTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPQFIHD*QHGSGQ
Trigger: TTGTCCAGACCCATGTTGGCAATCATGTATGAACTG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATAATACAGGGCCACTATaGCAATGTCTGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYNTGPL*QCLLCP
Trigger: TGGACACAGCAGACATTGCCATAGTGGCCCTGTATT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACAGCATGCAGTGCTCTaGGTTGATGCAAGCTATATC +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQQHAVL*VDASYI
Trigger: GATATAGCTTGCATCAACCCAGAGCACTGCATGCTG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCCGTTGGGAATGATGTaGTTGATGGTCTCATTATTC +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKPLGMM*LMVSLF
Trigger: GAATAATGAGACCATCAACCACATCATTCCCAACGG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCCAAAAGTTCTTGTTTaGCACCTCTCAAACATGCTA +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSPKVLV*HLSNML
Trigger: TAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATGTGGGACTCACCACTaGCAAAGCCAGTTAATTACT +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARCGTHH*QSQLIT
Trigger: AGTAATTAACTGGCTTTGCCAGTGGTGAGTCCCACA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTATAGTGCTTTTCAGTaGTATAGAGCAAAACCACTG +
Preference number: 4 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSYSAFQ*YRAKPL
Trigger: CAGTGGTTTTGCTCTATACCACTGAAAAGCACTATA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCTTCTTAATTGGGATTaGGAACTTAGCTCGTACTCT +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISLLNWD*ELSSYS
Trigger: AGAGTACGAGCTAAGTTCTCAATCCCAATTAAGAAG...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCATGAAAATTCCAAGTaGACACACAGCAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHENSK*THSKKS
Trigger: GGACTTTTTGCTGTGTGTTCACTTGGAATTTTCATG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAAGCGTAAACAATGCCTaGGAGATGCACAGTTACATA +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARSVNNA*EMHSYI
Trigger: TATGTAACTGTGCATCTCTCAGGCATTGTTTACGCT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGACAAAGGACAGTGTTaGGCATACGAAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYDKGQC*AYEDTE
Trigger: TTCTGTGTCTTCGTATGCTCAACACTGTCCTTTGTC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTTATTTATTGGTGCCCTaGTTTATATGGGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLYLLVP*FIWGGV
Trigger: AACTCCTCCCCATATAAATCAGGGCACCAATAAATA...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAAAAGACCAGTCTCTCTaGATGGTAAGTGGGCATATA +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARKDQSL*MVSGHI
Trigger: TATATGCCCACTTACCATTCAGAGAGACTGGTCTTT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACTTTGTCCTTTGGTTTaGTGTCTTGATGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQLCPLV*CLDGGG
Trigger: ACCACCACCATCAAGACAGCAAACCAAAGGACAAAG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACCACTATGGCAATGTCTaGTGTGTCCAGTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHHYGNV*CVQYSS
Trigger: AGAGCTGTACTGGACACAGCAGACATTGCCATAGTG...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTAATCAGAGACAAGGCTaGAAAATAGACCTGAATCCT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLNQRQG*KIDLNP
Trigger: AGGATTCAGGTCTATTTTGCAGCCTTGTCTCTGATT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGTCACTCATCAGAGCTaGAATCATCACTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQVTHQS*NHHCHH
Trigger: ATGATGGCAGTGATGATTGCAGCTCTGATGAGTGAC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTGTCCCTGAATTAAGTTaGAATCAGCAATTCACAAAC +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSVPELS*NQQFTN
Trigger: GTTTGTGAATTGCTGATTGCAACTTAATTCAGGGAC...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCATACCAATGTAATATaGCCTTCTCATCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSHTNVI*PSHQIL
Trigger: CAAGATCTGATGAGAAGGGCATATTACATTGGTATG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATAGGACACAGCACCATTaGTATTGCTTGATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYRTQHH*YCLMLL
Trigger: GAGAAGCATCAAGCAATAGCAATGGTGCTGTGTCCT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAATGGCCAGGCTCTTTGTaGCAAAATACAATGGATCCT +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQWPGSL*QNTMDP
Trigger: AGGATCCATTGTATTTTGGCACAAAGAGCCTGGCCA...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTGACTATGTATGGTACTaGCCAAAAAGTAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISDYVWY*PKSKVH
Trigger: GTGCACTTTACTTTTTGGGCAGTACCATACATAGTC...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCGTATGGTTCCTCTTTTaGGGAGCAGTTCTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSVWFLF*GAVLLH
Trigger: GTGAAGGAGAACTGCTCCCCAAAAGAGGAACCATAC...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTTACAGGCAGACTTGTTaGTCATTTCAGTATGGTTCA +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPYRQTC*SFQYGS
Trigger: TGAACCATACTGAAATGACCAACAAGTCTGCCTGTA...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCAAGTGTTTACTCTCTaGGGGTGGCAGAACAGAATA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYQVFTL*GWQNRI
Trigger: TATTCTGTTCTGCCACCCCCAGAGAGTAAACACTTG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTAAAGAAAATGAGCCATaGACTGCGAATACAGACACA +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPKENEP*TANTDT
Trigger: TGTGTCTGTATTCGCAGTCCATGGCTCATTTTCTTT...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTGCCTCAGACTATGTATaGTACTGCCCAAAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPASDYV*YCPKSK
Trigger: TTTACTTTTTGGGCAGTACCATACATAGTCTGAGGC...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCAAGATAAATTAGGTTaGGGATACCTACTGCCAACT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPQDKLG*GYLLPT
Trigger: AGTTGGCAGTAGGTATCCCCAACCTAATTTATCTTG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTGATACCGCATTGTCTTaGGCTTATCAATACTGTAGT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLDTALS*AYQYCS
Trigger: ACTACAGTATTGATAAGCCCAAGACAATGCGGTATC...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTCTGTAAACCATACGTaGACTGGACTACACAGAGCA +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSSVNHT*TGLHRA
Trigger: TGCTCTGTGTAGTCCAGTTCACGTATGGTTTACAGA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCATGGTATATACCCCTaGCCGGATGTAAATTGGGAT +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSHGIYP*PDVNWD
Trigger: ATCCCAATTTACATCCGGTCAGGGGTATATACCATG...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCCACCGAGAGCTTGGTaGAAATATAGAGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTPPRAW*KYRESE
Trigger: CTCTGATTCTCTATATTTTCACCAAGCTCTCGGTGG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAAATGAACCTGGCAAATaGACTTGTCCTGAAACAAGT +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARNEPGK*TCPETS
Trigger: ACTTGTTTCAGGACAAGTTCATTTGCCAGGTTCATT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCATCTGAACAAACCATaGGTCCAGATTTGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTHLNKP*VQIWRP
Trigger: AGGTCTCCAAATCTGGACTCATGGTTTGTTCAGATG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACTTGTCCAGACACATCTaGACAAACCATGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHLSRHI*TNHESR
Trigger: TCTGGACTCATGGTTTGTTCAGATGTGTCTGGACAA...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTGAGATGAAAATTGCCTaGGAAGACAAAAGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPEMKIA*EDKSLR
Trigger: TCTTAGACTTTTGTCTTCTCAGGCAATTTTCATCTC...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACTTCTCATCAGATCTTaGGATGAAAATTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARLLIRS*DENCLR
Trigger: TCTCAGGCAATTTTCATCTCAAGATCTGATGAGAAG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACTCCCAGCTAATTTCTTaGGGTATCATCCCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHSQLIS*GIIPKS
Trigger: GCTCTTAGGGATGATACCTCAAGAAATTAGCTGGGA...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTGTTTCTCTGCACTCTaGCACCATCATTTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSCFSAL*HHHFKG
Trigger: CCCTTTGAAATGATGGTGTCAGAGTGCAGAGAAACA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCACTGTGTTTTGTCTTaGTTTGCTCGCTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTHCVLS*FARSSA
Trigger: AGCTGAAGAGCGAGCAAATCAAGACAAAACACAGTG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGGAAAAGGGCAATGCTaGGTAGAAGAACATACGTTT +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQGKGQC*VEEHTF
Trigger: AAACGTATGTTCTTCTACTCAGCATTGCCCTTTTCC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGTATGAGCAAAAGACTTaGTCTGTTTGCCACTCAAAA +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKYEQKT*SVCHSK
Trigger: TTTTGAGTGGCAAACAGATCAAGTCTTTTGCTCATA...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGACCACAGAAAAGTCTATaGGCAAAAGACTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARPQKSL*AKDLIC
Trigger: ACAGATCAAGTCTTTTGCTCATAGACTTTTCTGTGG...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCAGCATTTACTCAGGTaGTGGAGGAGAAATTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTQHLLR*WRRNSE
Trigger: CTCAGAATTTCTCCTCCAGCACCTGAGTAAATGCTG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAAATCATAAGTGTAAGTaGCCCAATGATCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARNHKCK*PNDHEQ
Trigger: CTGCTCATGATCATTGGGGCACTTACACTTATGATT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACGGGTGTCAGGTAATCTaGTACCTCCTGAATGTAAAG +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHGCQVI*YLLNVK
Trigger: CTTTACATTCAGGAGGTAGCAGATTACCTGACACCC...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAGAATGCTCTTTTCTTaGATTTTGTATGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSRMLFS*ILYGSS
Trigger: AGAGGAACCATACAAAATGCAAGAAAAGAGCATTCT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTCTCCCTCCATCAATGTGGTACAAACTTATTGAGATTATTCCTTTGGGTCCCTCACTGCATCTCAGAATaGTCTTTTCTTGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: LSLHQCGTNLLRLFLWVPHCISE*SFLAFC
Trigger: ACAAAATGCAAGAAAAGAGCATTCTGAGATGCAGTG...AGGGACCCAAAGGAATAATCTCAATAAGTTTGTACCACATTGATGGAGGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCTACAGCGTAAACAATaGCTGAGAGATGCACAGTTA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYLQRKQ*LRDAQL
Trigger: TAACTGTGCATCTCTCAGGCATTGTTTACGCTGTAG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACGGCACCTCTCAAACATaGTATCCATCCTACAGAAAG +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHGTSQT*YPSYRK
Trigger: CTTTCTGTAGGATGGATAGCATGTTTGAGAGGTGCC...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGCATGGGAAGACACTATaGTACCTGACAATTTCTAAA +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKHGKTL*YLTISK
Trigger: TTTAGAAATTGTCAGGTAGCATAGTGTCTTCCCATG...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTTATCAACACTGAAATaGCTTCAACAACCTAGCATC +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISLSTLK*LQQPSI
Trigger: GATGCTAGGTTGTTGAAGGCATTTCAGTGTTGATAA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAACATTTACTCAGGTGCTaGAGGAGAAATTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQHLLRC*RRNSEL
Trigger: CAACTCAGAATTTCTCCTCCAGCACCTGAGTAAATG...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATAAACCATACGTGAACTaGACTACACAGAGCAACACA +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYKPYVN*TTQSNT
Trigger: TGTGTTGCTCTGTGTAGTCCAGTTCACGTATGGTTT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCATTCCATATACTGGTaGTACAAAAATACCTACAGG +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPHSIYW*YKNTYR
Trigger: CCTGTAGGTATTTTTGTACCACCAGTATATGGAATG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATACAGACACACTCTATTaGCTCTCACAAGAGTTAACC +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYTDTLY*LSQELT
Trigger: GGTTAACTCTTGTGAGAGCCAATAGAGTGTGTCTGT...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTCAACAACCTAGCATCTaGCTAATGCAAAATCTTACA +
Preference number: 4 (lower is better)
Translates to: IPGGLYDWHLWDTENTISQQPSI*LMQNLT
Trigger: TGTAAGATTTTGCATTAGCCAGATGCTAGGTTGTTG...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAAAAGTCCTCAATACTaGGGCAAAACATCACTTTCA +
Preference number: 4 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKKSPQY*GKTSLS
Trigger: TGAAAGTGATGTTTTGCCCCAGTATTGAGGACTTTT...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTGGCCTTTGCCAGTTTaGGATTTCTGCAATAGCAAT +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYWPLPV*DFCNSN
Trigger: ATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTTATGACTGGCACTTGTaGGATACAGAGAATACTATT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPYDWHL*DTENTI
Trigger: AATAGTATTCTCTGTATCCCACAAGTGCCAGTCATA...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTCTCCCTCCATCAATGTaGTACAAACTTATTGAGATT +
Preference number: 4 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPLPPSM*YKLIEI
Trigger: AATCTCAATAAGTTTGTACCACATTGATGGAGGGAG...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGTCCTCACCTCATTTTaGCTTTTAGCTATTCTAGTC +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYVLTSF*LLAILV
Trigger: GACTAGAATAGCTAAAAGTCAAAATGAGGTGAGGAC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGTGGTACAAACTTATTaGGATTATTCCTTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQVVQTY*DYSFGS
Trigger: GGACCCAAAGGAATAATCTCAATAAGTTTGTACCAC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTACTGAAACATCCTTATaGTCTAAGTCACTACAACAA +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLTETSL*SKSLQQ
Trigger: TTGTTGTAGTGACTTAGAGCATAAGGATGTTTCAGT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTATTTGTAAAGAAGTCTaGTCAGGCTATTATCAACAC +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLICKEV*SGYYQH
Trigger: GTGTTGATAATAGCCTGAGCAGACTTCTTTACAAAT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAATATATACTGGCCTTTaGCAGTTTGGGATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQIYTGL*QFGISA
Trigger: TGCAGAAATCCCAAACTGGCAAAGGCCAGTATATAT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAATCTCCAGTTTCAAGTTaGAGTAAAAAGCCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQSPVSS*SKKPSN
Trigger: GTTTGAGGGCTTTTTACTGCAACTTGAAACTGGAGA...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATTTTCTTCAGGTTTCTaGACATATCTTCCAACTGGA +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARFSSGF*TYLPTG
Trigger: TCCAGTTGGAAGATATGTCCAGAAACCTGAAGAAAA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAGACTATATATGCCAATaGTTAGGGTTGTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARDYICQ*LGLLVT
Trigger: AGTAACCAACAACCCTAACCATTGGCATATATAGTC...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCACTGTACAATGAGATaGATACAATTAGTCAAACCT +
Preference number: 4 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLHCTMR*IQLVKP
Trigger: AGGTTTGACTAATTGTATCCATCTCATTGTACAGTG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 72 bp TTCTCTACCTTCCAAGACCAGTGTCCTCACCTCATTTaGACTTTTAGCTATTCTAGTCAATATCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FSTFQDQCPHLI*TFSYSSQYQAS
Trigger: TGAAGCTTGATATTGACTAGAATAGCTAAAAGTCAAAATGAGGTGAGGACACTGGTCTTGGAAGGTAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
3UTR CAA 72 bp GCTGGTTATATTATGGAATACCATATATACTGGCCTTaGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: AGYIMEYHIYWP*PVWDFCNSNKP
Trigger: AGGCTTATTGCTATTGCAGAAATCCCAAACTGGCAAAGGCCAGTATATATGGTATTCCATAATATAACCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACATAATAGCGCTCCAATaGCAGAAGTGTCCAACTTTT +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHIIALQ*QKCPTF
Trigger: AAAAGTTGGACACTTCTGTCATTGGAGCGCTATTAT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAGGAGTCAAAGTAGCTaGACAGCTAAAGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHRSQSS*TAKVFQ
Trigger: TTGGAATACTTTAGCTGTTCAGCTACTTTGACTCCT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACACACTACGAAAAATCTaGGACCACTGTGTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHTLRKI*DHCVLS
Trigger: AGACAAAACACAGTGGTCTCAGATTTTTCGTAGTGT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAAGTATTACTTTAACTTaGCGAGTCTCTTCTAGCATC +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQSITLT*RVSSSI
Trigger: GATGCTAGAAGAGACTCGGCAAGTTAAAGTAATACT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAAGTTAATCAAACACTaGTTAGGGGGCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHKLIKH*LGGWSF
Trigger: AAATGACCAGCCCCCTAAGCAGTGTTTGATTAACTT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGTGAAAGACTATATATaGCAATGGTTAGGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYVKDYI*QWLGLL
Trigger: CAACAACCCTAACCATTGGCATATATAGTCTTTCAC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACTGTTTTGTCTTGATTTaGTCGCTCTTCAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHCFVLI*SLFSCL
Trigger: TAAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACA...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGTGAACACGATTTTGTaGTTTCTATGGACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQVNTIL*FLWTLA
Trigger: AGCTAAAGTCCATAGAAAGCACAAAATCGTGTTCAC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCTGGAAATCATTCCTaGGACAACTATGATAAACAT +
Preference number: 4 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPGNHS*DNYDKH
Trigger: ATGTTTATCATAGTTGTCCCAGGAATGATTTCCAGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTTCCTTCATCTTTCATaGAGGACAAAGGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSFLHLS*RTKDSV
Trigger: AACACTGTCCTTTGTCCTCCATGAAAGATGAAGGAA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CCA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGATCTCTGAATGGTAAGTaGGCATATACACATATAGAA +
Preference number: 4 (lower is better)
Translates to: IFSNNVVGSFLASFLLARSLNGK*AYTHIE
Trigger: TTCTATATGTGTATATGCCCACTTACCATTCAGAGA...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACCACACAGACACAAGATaGTGTACCTTATGTATCTTA +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHHTDTR*CTLCIL
Trigger: TAAGATACATAAGGTACATCATCTTGTGTCTGTGTG...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR TCA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTATATGACTACTAAGTaGATAATGGTGTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSYMTTK*IMVWDS
Trigger: TGAGTCCCACACCATTATTCACTTAGTAGTCATATA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAGGTCCCACAAAATATaGAATAATCATCCTGCATAC +
Preference number: 4 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHRSHKI*NNHPAY
Trigger: GTATGCAGGATGATTATTGCATATTTTGTGGGACCT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAATACTATTAGTCTTGTaGTTTCTATGTGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQILLVL*FLCVGT
Trigger: TGTACCCACACATAGAAAGCACAAGACTAATAGTAT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR GCA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCATATTCTGCTCTAAGTaGTCTGTGAGAATAATTGGT +
Preference number: 4 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTIFCSK*SVRIIG
Trigger: ACCAATTATTCTCACAGAGCACTTAGAGCAGAATAT...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 90 bp GGCCCACAGGAACCAGCTTCATCACCAGGCGTGGGTAAGCAATATTaGAGCAACCAGCTCTGCTTCCACACACCAGCATGCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GPQEPASSPGVGKQY*SNQLCFHTPACSAL
Trigger: CAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTCCAATATTGCTTACCCACGCCTGGTGATGAAGCTGGTTCCTGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 90 bp AAGGACCCTCTGCACGATGACTTGGTCAGCACACCAGTACCATACTaGAGCTGGGGTCTGCCCAAGAATGAATCCAGGCCAAGGAACATC +
Preference number: 5 (lower is better)
Translates to: KDPLHDDLVSTPVPY*SWGLPKNESRPRNI
Trigger: GATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 90 bp CTTTGGCATGAGCAATGTTTTTGGCTGCAAGGACCCTCTGCACGATaGCTTGGTCAGCACACCAGTACCATACTGAAGCTGGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: LWHEQCFWLQGPSAR*LGQHTSTILKLGSA
Trigger: GGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCTCATGCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp GAAGTGCTCACTCCCAATATTGCTCACAAACAGAGAGGCACCAATTaGTACCCAGGTCATAGAGCGCCCCGCCAGGAAGTATCCACTCAC +
Preference number: 5 (lower is better)
Translates to: EVLTPNIAHKQRGTN*YPGHRAPRQEVSTH
Trigger: GTGAGTGGATACTTCCTGGCGGGGCGCTCTATGACCTGGGTAGCAATTGGTGCCTCTCTGTTTGTGAGCAATATTGGGAGTGAGCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp GTCACATTCTGGGGCACGGTAGGCAAAGGCCAGTATCAAACGGACTaGTCCAAGAACAAAGCCAGCCATTCCACCATAGAAAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VTFWGTVGKGQYQTD*SKNKASHSTIESPL
Trigger: CAAGGGGCTTTCTATGGTGGAATGGCTGGCTTTGTTCTTGGAGCAGTCCGTTTGATACTGGCCTTTGCCTACCGTGCCCCAGAATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 90 bp GGTCAGCACACCAGTACCATACTGAAGCTGGGGTCTGCCCAAGAATaGATCCAGGCCAAGGAACATCTTCATCTGTTGGATTCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GQHTSTILKLGSAQE*IQAKEHLHLLDSAA
Trigger: TGCTGCGGAATCCAACAGATGAAGATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp GCCAGCCATAAGAGTAGAGCCTTTGGCATGAGCAATGTTTTTGGCTaGAAGGACCCTCTGCACGATGACTTGGTCAGCACACCAGTACCA +
Preference number: 5 (lower is better)
Translates to: ASHKSRAFGMSNVFG*KDPLHDDLVSTPVP
Trigger: TGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCTCATGCCAAAGGCTCTACTCTTATGGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp AATTGCCAGCAGGAACAAGGCTGCCACTGGGGGTGTCAGGTAATCTaGTACCTCCTGAATGTAAAGGTACATCTGGCCTCCTTGCATCTC +
Preference number: 5 (lower is better)
Translates to: NCQQEQGCHWGCQVI*YLLNVKVHLASLHL
Trigger: GAGATGCAAGGAGGCCAGATGTACCTTTACATTCAGGAGGTAGCAGATTACCTGACACCCCCAGTGGCAGCCTTGTTCCTGCTGGCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 90 bp GGCAGGAGCTTTAAGAAGCCAGCCATAAGAGTAGAGCCTTTGGCATaGGCAATGTTTTTGGCTGCAAGGACCCTCTGCACGATGACTTGG +
Preference number: 5 (lower is better)
Translates to: GRSFKKPAIRVEPLA*AMFLAARTLCTMTW
Trigger: CCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCTCATGCCAAAGGCTCTACTCTTATGGCTGGCTTCTTAAAGCTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp ACGATGACTTGGTCAGCACACCAGTACCATACTGAAGCTGGGGTCTaGCCAAGAATGAATCCAGGCCAAGGAACATCTTCATCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: TMTWSAHQYHTEAGV*PRMNPGQGTSSSVG
Trigger: TCCAACAGATGAAGATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp AAGGTACATCTGGCCTCCTTGCATCTCCACGATGATTGGCACCCATaGTATGCTGATCACCACCATAAATGCCACAAATATCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: KVHLASLHLHDDWHP*YADHHHKCHKYPPH
Trigger: GTGGGGAGGATATTTGTGGCATTTATGGTGGTGATCAGCATAGCATGGGTGCCAATCATCGTGGAGATGCAAGGAGGCCAGATGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp GCAATATTGGAGCAACCAGCTCTGCTTCCACACACCAGCATGCAGTaGTCTGGGTTGATGCAAGCTATATCATCAGTAAACAGTATCCTG +
Preference number: 5 (lower is better)
Translates to: AILEQPALLPHTSMQ*SGLMQAISSVNSIL
Trigger: CAGGATACTGTTTACTGATGATATAGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTCCAATATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTTGGCCACCAAATCGCTaGGACAAGTATTCAGGCATG +
Preference number: 5 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSWPPNR*DKYSGM
Trigger: CATGCCTGAATACTTGTCCAAGCGATTTGGTGGCCA...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 90 bp ATTGGAGCAACCAGCTCTGCTTCCACACACCAGCATGCAGTGCTCTaGGTTGATGCAAGCTATATCATCAGTAAACAGTATCCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: IGATSSASTHQHAVL*VDASYIISKQYPGN
Trigger: ATTTCCAGGATACTGTTTACTGATGATATAGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATATTCTCAAATAATGTGGTAGGCTCATTCCTGGCTAGCTTTTTGCTGGCAAGAACCCATGAGAGCTGCTaGCCCATTGGAGTAAGCGTC +
Preference number: 5 (lower is better)
Translates to: IFSNNVVGSFLASFLLARTHESC*PIGVSV
Trigger: GACGCTTACTCCAATGGGCAAGCAGCTCTCATGGGT...TCTTGCCAGCAAAAAGCTAGCCAGGAATGAGCCTACCACATTATTTGAGAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTGGACAAAGGACAGTGTaGAGCATACGAAGACACAGA +
Preference number: 5 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSGQRTV*SIRRHR
Trigger: TCTGTGTCTTCGTATGCTCAACACTGTCCTTTGTCC...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp GTACTCTTAATCCACTCTCCACAAGACCATCAGCATTTACTCAGGTaGTGGAGGAGAAATTCTGAGTTGCAGCTAAGTCTAGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VLLIHSPQDHQHLLR*WRRNSELQLSLVKP
Trigger: AGGCTTCACTAGACTTAGCTGCAACTCAGAATTTCTCCTCCAGCACCTGAGTAAATGCTGATGGTCTTGTGGAGAGTGGATTAAGAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 90 bp CTGAATGTAAAGGTACATCTGGCCTCCTTGCATCTCCACGATGATTaGCACCCATGCTATGCTGATCACCACCATAAATGCCACAAATAT +
Preference number: 5 (lower is better)
Translates to: LNVKVHLASLHLHDD*HPCYADHHHKCHKY
Trigger: ATATTTGTGGCATTTATGGTGGTGATCAGCATAGCATGGGTGCCAATCATCGTGGAGATGCAAGGAGGCCAGATGTACCTTTACATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCTCTGCACGATGACTaGGTCAGCACACCAGTACCA +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPLHDD*VSTPVP
Trigger: TGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp CTCAAACCCGCCAATCTCCATTATGCTAATAATCATAAGTGTAAGTaGCCCAATGATCATGAGCAGAGCCTGCAGAGTGTCTGTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LKPANLHYANNHKCK*PNDHEQSLQSVCVD
Trigger: ATCTACACAGACACTCTGCAGGCTCTGCTCATGATCATTGGGGCACTTACACTTATGATTATTAGCATAATGGAGATTGGCGGGTTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCGGGAGCTTGCGCTCTaGCGGATAAGTTTGTACACA +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYRELAL*RISLYT
Trigger: TGTGTACAAACTTATCCGCAAGAGCGCAAGCTCCCG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAAAGCCCCTTGTTCATaGCAGCGCTTCCAGAAAATT +
Preference number: 5 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSKAPCS*QRFQKI
Trigger: AATTTTCTGGAAGCGCTGCAATGAACAAGGGGCTTT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TACATGATTGCCAACATGGGTCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAGAGACTTCATAACCTaGGACATGTCGCAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: YMIANMGLDKRKWDVQAKRDFIT*DMSQPQ
Trigger: TTGAGGCTGCGACATGTCCAAGGTTATGAAGTCTCT...CTTTGCTTGGACATCCCATTTTCTTTTGTCCAGACCCATGTTGGCAATCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTCATATATACTGGCCTTaGCCAGTTTGGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSHIYWP*PVWDFC
Trigger: GCAGAAATCCCAAACTGGCAAAGGCCAGTATATATG...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTAGGAGAAATTCTGAGTaGCAGCTAAGTCTAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSRRNSE*QLSLVK
Trigger: CTTCACTAGACTTAGCTGCAACTCAGAATTTCTCCT...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTATGCAGTGCTCTGGGTaGATGCAAGCTATATCATCA +
Preference number: 5 (lower is better)
Translates to: IPGGLYDWHLWDTENTISMQCSG*MQAISS
Trigger: TGATGATATAGCTTGCATCAACCCAGAGCACTGCAT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCGTACATCTGGCCTCCTaGCATCTCCACGATGATTGG +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSVHLAS*HLHDDW
Trigger: CCAATCATCGTGGAGATGCAAGGAGGCCAGATGTAC...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAAAGGTCTGCCAAGACTaGGCAGTGCAGACAGTATAC +
Preference number: 5 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQKVCQD*AVQTVY
Trigger: GTATACTGTCTGCACTGCCAAGTCTTGGCAGACCTT...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTAAGGACACAGCACCATaGCTATTGCTTGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLKDTAP*LLLDAS
Trigger: AGAAGCATCAAGCAATAGCAATGGTGCTGTGTCCTT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTTTCCTGGCTAGCTTTTaGCTGGCAAGAATAATCTCT +
Preference number: 5 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSFLASF*LARIIS
Trigger: AGAGATTATTCTTGCCAGCAAAAAGCTAGCCAGGAA...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 90 bp TTTATTTTTAGTAACCCCAGCCAAGTCTGTAAACCATACGTGAACTaGACTACACAGAGCAACACAGCAGGGTCAAAGTCTTTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: FIFSNPSQVCKPYVN*TTQSNTAGSKSLSF
Trigger: AAAGGACAAAGACTTTGACCCTGCTGTGTTGCTCTGTGTAGTCCAGTTCACGTATGGTTTACAGACTTGGCTGGGGTTACTAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAAGCAGGGTCAAAGTCTTaGTCCTTTGGTTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQAGSKS*SFGLLS
Trigger: AGACAGCAAACCAAAGGACAAAGACTTTGACCCTGC...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATTGCTCACTCCCAATATaGCTCACAAACAGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYCSLPI*LTNREA
Trigger: TGCCTCTCTGTTTGTGAGCAATATTGGGAGTGAGCA...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCACCATAGAAAGCCCCTaGTTCATTGCAGCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTTIESP*FIAALP
Trigger: TGGAAGCGCTGCAATGAACAAGGGGCTTTCTATGGT...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTACTTTACAGGCAGACTaGTTGGTCATTTCAGTATGG +
Preference number: 5 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLTLQAD*LVISVW
Trigger: CCATACTGAAATGACCAACAAGTCTGCCTGTAAAGT...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCACTGTGTTTTGTCTaGATTTGCTCGCTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPLCFV*ICSLFS
Trigger: GCTGAAGAGCGAGCAAATCAAGACAAAACACAGTGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTAGAATACTATTAGTCTaGTGCTTTCTATGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSRILLV*CFLCVG
Trigger: ACCCACACATAGAAAGCACAAGACTAATAGTATTCT...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GAGATGAGATCTATTGAATTTAGGCCGAAGGACACAGCACCATTGCTATTGCTTCTTTATGACTGGCACTaGTGGGATACAGAGAATACT +
Preference number: 5 (lower is better)
Translates to: EMRSIEFRPKDTAPLLLLLYDWH*WDTENT
Trigger: AGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAG...AAGCAATAGCAATGGTGCTGTGTCCTTCGGCCTAAATTCAATAGATCTCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GGACAAGTGAAAGAATCCTCTCCACCCCATTGTGAAAAGCAAAGTAGCTCCTCTCAGGTTATAACAGCTTaGCATTATCACATGTTGCTA +
Preference number: 5 (lower is better)
Translates to: GQVKESSPPHCEKQSSSSQVITA*HYHMLL
Trigger: TAGCAACATGTGATAATGCAAAGCTGTTATAACCTG...AGAGGAGCTACTTTGCTTTTCACAATGGGGTGGAGAGGATTCTTTCACTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACAAAAGCAGTAAGGCATaGAATTCCCATGCGCCCACT +
Preference number: 5 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHKSSKA*NSHAPT
Trigger: AGTGGGCGCATGGGAATTCAATGCCTTACTGCTTTT...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTTGGGAATGATGTGGTaGATGGTCTCATTATTCTCA +
Preference number: 5 (lower is better)
Translates to: IPGGLYDWHLWDTENTISLGMMW*MVSLFS
Trigger: TGAGAATAATGAGACCATCAACCACATCATTCCCAA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTTTCAGTCTGTTAGGTTaGGCTTCACTTAAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPFSLLG*ASLKLK
Trigger: CTTCAACTTAAGTGAAGCCAAACCTAACAGACTGAA...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATCCCAAAAGTTCTTGTTaGGCACCTCTCAAACATGCT +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYPKSSC*APLKHA
Trigger: AGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGG...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCACCATGAGTCCAGATTaGGAGACCTGGTTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSTMSPD*ETWFLF
Trigger: GAACAGAAACCAGGTCTCCAAATCTGGACTCATGGT...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCTGGACAAAAGAAAATGGGATGTCCAAGCAAAGAACGGGTAAATCCCTGCTCTTTTCTTAGGAAAATTTaGTCCTGGCAAGTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: SGQKKMGCPSKERVNPCSFLRKI*SWQVSV
Trigger: TACAGAGACTTGCCAGGACAAAATTTTCCTAAGAAA...AGAGCAGGGATTTACCCGTTCTTTGCTTGGACATCCCATTTTCTTTTGTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGGCATCAAAACTCCATaGTTTCTCTGCACTCTGACA +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYGIKTP*FLCTLT
Trigger: TGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGTGTTTTGTCTTGATTaGCTCGCTCTTCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYVFCLD*LALQLL
Trigger: AAGCAGCTGAAGAGCGAGCAAATCAAGACAAAACAC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCATACCTACTGCCAACTaGTGCGGTTGTCGAATTCAC +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSIPTAN*CGCRIH
Trigger: GTGAATTCGACAACCGCACAAGTTGGCAGTAGGTAT...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTATGGAATATAAACTGTaGTCACGTACCTGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: IPGGLYDWHLWDTENTISMEYKL*SRTCSR
Trigger: TCGAGAACAGGTACGTGACAACAGTTTATATTCCAT...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTAGTTTAGATACCGCATaGTCTTGGGCTTATCAATAC +
Preference number: 5 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPSLDTA*SWAYQY
Trigger: GTATTGATAAGCCCAAGACAATGCGGTATCTAAACT...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ACTACTAACCCCAAAAGTTCTTGTTTGGCACCTCTCAAACATGCTATCCATCCTATTGAGATTATTCCTTaGGGTCCCTTACCATTAGGA +
Preference number: 5 (lower is better)
Translates to: TTNPKSSCLAPLKHAIHPIEIIP*GPLPLG
Trigger: TCCTAATGGTAAGGGACCCAAAGGAATAATCTCAAT...AGGATGGATAGCATGTTTGAGAGGTGCCAAACAAGAACTTTTGGGGTTAGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCTTTGGTTTGCTGTCTaGATGGTGGTGGTTGTGATA +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSLWFAV*MVVVVI
Trigger: TATCACAACCACCACCATCAAGACAGCAAACCAAAG...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TGCCAGTTTGGGATTTCTGCAATAGCAATAAGCCTCGTTTCTGTTTCCAATTATGAACATCTTCATCTGTaGGATTCCGCAGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: CQFGISAIAISLVSVSNYEHLHL*DSAAFS
Trigger: TGAAAATGCTGCGGAATCCAACAGATGAAGATGTTC...ATAATTGGAAACAGAAACGAGGCTTATTGCTATTGCAGAAATCCCAAACTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCCTCTTGCGGATAAGTTaGTACACATCGAGGGTGAAT +
Preference number: 5 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTLLRIS*YTSRVN
Trigger: ATTCACCCTCGATGTGTACAAACTTATCCGCAAGAG...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCTCTTCAGATTTCCCGTaGGGAATGATGTGGTTGATG +
Preference number: 5 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTSSDFP*GMMWLM
Trigger: CATCAACCACATCATTCCCAACGGGAAATCTGAAGA...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp TCCCTCAAAGTGTTCAGGTTAACTCTTCTAAAACATCTCATATTAGTCTACACCTCTCTGAGACTCCTCTaGCTGAGGCTCTTACTTTTA +
Preference number: 5 (lower is better)
Translates to: SLKVFRLTLLKHLILVYTSLRLL*LRLLLL
Trigger: TAAAAGTAAGAGCCTCAGCAAGAGGAGTCTCAGAGA...GGTGTAGACTAATATGAGATGTTTTAGAAGAGTTAACCTGAACACTTTGAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTGTGTGAACACGATTTaGTGCTTTCTATGGACTTTA +
Preference number: 5 (lower is better)
Translates to: IPGGLYDWHLWDTENTISCVNTI*CFLWTL
Trigger: TAAAGTCCATAGAAAGCACAAAATCGTGTTCACACA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp ATACCTGGTGGCCTTTATGACTGGCACTTGTGGGATACAGAGAATACTATTAGTTGTGGTACAAACTTATaGAGATTATTCCTTTGGGTC +
Preference number: 5 (lower is better)
Translates to: IPGGLYDWHLWDTENTISCGTNL*RLFLWV
Trigger: GACCCAAAGGAATAATCTCAATAAGTTTGTACCACA...ACTAATAGTATTCTCTGTATCCCACAAGTGCCAGTCATAAAGGCCACCAGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCTTGCATTATCACATGTaGCTAAGCCAAGGGTGTTCC +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSLHYHM*LSQGCS
Trigger: GGAACACCCTTGGCTTAGCAACATGTGATAATGCAA...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 90 bp AGTGAACACACAGCAAAAAGTCCAATATTTAGTATTACTTTAACTTaGCGAGTCTCTTCTAGCATCTGTAAACAAACAGCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SEHTAKSPIFSITLT*RVSSSICKQTASSS
Trigger: GGAAGAGGAGGCTGTTTGTTTACAGATGCTAGAAGAGACTCGGCAAGTTAAAGTAATACTAAATATTGGACTTTTTGCTGTGTGTTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp GACAACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCAAAGTCTTTGTCCTTaGGTTTGCTGTCTTGATGGT +
Preference number: 5 (lower is better)
Translates to: DNNYVIVLFSGIEQNHCSQSLCP*VCCLDG
Trigger: ACCATCAAGACAGCAAACCAAAGGACAAAGACTTTG...GGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp AACAATTATGTTATAGTGCTTTTCAGTGGTATAGAGCAAAACCACTGTTCCCACTTACAGGCAGACTTGTaGGTCATTTCAGTATGGTTC +
Preference number: 5 (lower is better)
Translates to: NNYVIVLFSGIEQNHCSHLQADL*VISVWF
Trigger: GAACCATACTGAAATGACCAACAAGTCTGCCTGTAA...GTGGGAACAGTGGTTTTGCTCTATACCACTGAAAAGCACTATAACATAATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS-3UTR CAA 90 bp CTTTTTGGCATCAAAACTCCATTGTTTCTCTGCACTCTGACACCATCATTTCAATTAACAGGAAAGGTCTaGTATACATCTCTCTATCCA +
Preference number: 5 (lower is better)
Translates to: LFGIKTPLFLCTLTPSFQLTGKV*YTSLYP
Trigger: TGGATAGAGAGATGTATACAAGACCTTTCCTGTTAA...TTGAAATGATGGTGTCAGAGTGCAGAGAAACAATGGAGTTTTGATGCCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp GCAGCGCTTCCAGAAAATTGCCAGCAGGAACAAGGCTaGCACTGGGGGTGTCAGGTAATCTGCTACCTCCTG +
Preference number: 6 (lower is better)
Translates to: AALPENCQQEQG*HWGCQVICYLL
Trigger: CAGGAGGTAGCAGATTACCTGACACCCCCAGTGGCAGCCTTGTTCCTGCTGGCAATTTTCTGGAAGCGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp CCGAAGGCCCACAGGAACCAGCTTCATCACCAGGCGTaGGTAAGCAATATTGGAGCAACCAGCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: PKAHRNQLHHQA*VSNIGATSSAS
Trigger: GGAAGCAGAGCTGGTTGCTCCAATATTGCTTACCCACGCCTGGTGATGAAGCTGGTTCCTGTGGGCCTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 72 bp CTGCACGATGACTTGGTCAGCACACCAGTACCATACTaGAGCTGGGGTCTGCCCAAGAATGAATCCAGGCCA +
Preference number: 6 (lower is better)
Translates to: LHDDLVSTPVPY*SWGLPKNESRP
Trigger: TGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp GAACCAGCTTCATCACCAGGCGTGGGTAAGCAATATTaGAGCAACCAGCTCTGCTTCCACACACCAGCATGC +
Preference number: 6 (lower is better)
Translates to: EPASSPGVGKQY*SNQLCFHTPAC
Trigger: GCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTCCAATATTGCTTACCCACGCCTGGTGATGAAGCTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp ACTCCCAATATTGCTCACAAACAGAGAGGCACCAATTaGTACCCAGGTCATAGAGCGCCCCGCCAGGAAGTA +
Preference number: 6 (lower is better)
Translates to: TPNIAHKQRGTN*YPGHRAPRQEV
Trigger: TACTTCCTGGCGGGGCGCTCTATGACCTGGGTAGCAATTGGTGCCTCTCTGTTTGTGAGCAATATTGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp TGGGGCACGGTAGGCAAAGGCCAGTATCAAACGGACTaGTCCAAGAACAAAGCCAGCCATTCCACCATAGAA +
Preference number: 6 (lower is better)
Translates to: WGTVGKGQYQTD*SKNKASHSTIE
Trigger: TTCTATGGTGGAATGGCTGGCTTTGTTCTTGGAGCAGTCCGTTTGATACTGGCCTTTGCCTACCGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp ATGTTTTTGGCTGCAAGGACCCTCTGCACGATGACTTaGTCAGCACACCAGTACCATACTGAAGCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: MFLAARTLCTMT*SAHQYHTEAGV
Trigger: GACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp GCAGCTCCAGATCCTGCCAGCCCAATGAAGTGCTCACTCCCAATATaGCTCACAAACAGAGAGGCACCAATTGCTACCCAGGTCATAGAG +
Preference number: 6 (lower is better)
Translates to: AAPDPASPMKCSLPI*LTNREAPIATQVIE
Trigger: CTCTATGACCTGGGTAGCAATTGGTGCCTCTCTGTTTGTGAGCAATATTGGGAGTGAGCACTTCATTGGGCTGGCAGGATCTGGAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp GACTGCTCCAAGAACAAAGCCAGCCATTCCACCATAGAAAGCCCCTaGTTCATTGCAGCGCTTCCAGAAAATTGCCAGCAGGAACAAGGC +
Preference number: 6 (lower is better)
Translates to: DCSKNKASHSTIESP*FIAALPENCQQEQG
Trigger: GCCTTGTTCCTGCTGGCAATTTTCTGGAAGCGCTGCAATGAACAAGGGGCTTTCTATGGTGGAATGGCTGGCTTTGTTCTTGGAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 72 bp GAGCAATGTTTTTGGCTGCAAGGACCCTCTGCACGATaGCTTGGTCAGCACACCAGTACCATACTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: EQCFWLQGPSAR*LGQHTSTILKL
Trigger: CAGCTTCAGTATGGTACTGGTGTGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp TGGTCAGCACACCAGTACCATACTGAAGCTGGGGTCTaGCCAAGAATGAATCCAGGCCAAGGAACATCTTCA +
Preference number: 6 (lower is better)
Translates to: WSAHQYHTEAGV*PRMNPGQGTSS
Trigger: TGAAGATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGTGTGCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp CAGGTAATCTGCTACCTCCTGAATGTAAAGGTACATCTGGCCTCCTaGCATCTCCACGATGATTGGCACCCATGCTATGCTGATCACCAC +
Preference number: 6 (lower is better)
Translates to: QVICYLLNVKVHLAS*HLHDDWHPCYADHH
Trigger: GTGGTGATCAGCATAGCATGGGTGCCAATCATCGTGGAGATGCAAGGAGGCCAGATGTACCTTTACATTCAGGAGGTAGCAGATTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp AAGAGTAGAGCCTTTGGCATGAGCAATGTTTTTGGCTaGAAGGACCCTCTGCACGATGACTTGGTCAGCACA +
Preference number: 6 (lower is better)
Translates to: KSRAFGMSNVFG*KDPLHDDLVST
Trigger: TGTGCTGACCAAGTCATCGTGCAGAGGGTCCTTGCAGCCAAAAACATTGCTCATGCCAAAGGCTCTACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp GAGCAACCAGCTCTGCTTCCACACACCAGCATGCAGTaGTCTGGGTTGATGCAAGCTATATCATCAGTAAAC +
Preference number: 6 (lower is better)
Translates to: EQPALLPHTSMQ*SGLMQAISSVN
Trigger: GTTTACTGATGATATAGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp AAGGTACATCTGGCCTCCTTGCATCTCCACGATGATTaGCACCCATGCTATGCTGATCACCACCATAAATGC +
Preference number: 6 (lower is better)
Translates to: KVHLASLHLHDD*HPCYADHHHKC
Trigger: GCATTTATGGTGGTGATCAGCATAGCATGGGTGCCAATCATCGTGGAGATGCAAGGAGGCCAGATGTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 72 bp ATTAACTCCCGGGAGCTTGCGCTCTTGCGGATAAGTTaGTACACATCGAGGGTGAATATGGTACTGGCACTG +
Preference number: 6 (lower is better)
Translates to: INSRELALLRIS*YTSRVNMVLAL
Trigger: CAGTGCCAGTACCATATTCACCCTCGATGTGTACAAACTTATCCGCAAGAGCGCAAGCTCCCGGGAGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 72 bp CTCCCCACAATCATTAACTCCCGGGAGCTTGCGCTCTaGCGGATAAGTTTGTACACATCGAGGGTGAATATG +
Preference number: 6 (lower is better)
Translates to: LPTIINSRELAL*RISLYTSRVNM
Trigger: CATATTCACCCTCGATGTGTACAAACTTATCCGCAAGAGCGCAAGCTCCCGGGAGTTAATGATTGTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 72 bp ACCAGTACCATACTGAAGCTGGGGTCTGCCCAAGAATaGATCCAGGCCAAGGAACATCTTCATCTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: TSTILKLGSAQE*IQAKEHLHLLD
Trigger: ATCCAACAGATGAAGATGTTCCTTGGCCTGGATTCATTCTTGGGCAGACCCCAGCTTCAGTATGGTACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp CTGGCCTCCTTGCATCTCCACGATGATTGGCACCCATaGTATGCTGATCACCACCATAAATGCCACAAATAT +
Preference number: 6 (lower is better)
Translates to: LASLHLHDDWHP*YADHHHKCHKY
Trigger: ATATTTGTGGCATTTATGGTGGTGATCAGCATAGCATGGGTGCCAATCATCGTGGAGATGCAAGGAGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp AGTAACCCCAGCCAAGTCTGTAAACCATACGTGAACTaGACTACACAGAGCAACACAGCAGGGTCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: SNPSQVCKPYVN*TTQSNTAGSKS
Trigger: AGACTTTGACCCTGCTGTGTTGCTCTGTGTAGTCCAGTTCACGTATGGTTTACAGACTTGGCTGGGGTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 72 bp AAGAACAAAGCCAGCCATTCCACCATAGAAAGCCCCTaGTTCATTGCAGCGCTTCCAGAAAATTGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: KNKASHSTIESP*FIAALPENCQQ
Trigger: CTGCTGGCAATTTTCTGGAAGCGCTGCAATGAACAAGGGGCTTTCTATGGTGGAATGGCTGGCTTTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp ACAAATATCCTCCCCACAATCATTAACTCCCGGGAGCTTGCGCTCTaGCGGATAAGTTTGTACACATCGAGGGTGAATATGGTACTGGCA +
Preference number: 6 (lower is better)
Translates to: TNILPTIINSRELAL*RISLYTSRVNMVLA
Trigger: TGCCAGTACCATATTCACCCTCGATGTGTACAAACTTATCCGCAAGAGCGCAAGCTCCCGGGAGTTAATGATTGTGGGGAGGATATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp GAGCAACCAGCTCTGCTTCCACACACCAGCATGCAGTGCTCTGGGTaGATGCAAGCTATATCATCAGTAAACAGTATCCTGGAAATCATT +
Preference number: 6 (lower is better)
Translates to: EQPALLPHTSMQCSG*MQAISSVNSILEII
Trigger: AATGATTTCCAGGATACTGTTTACTGATGATATAGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp ATACATATAATGGATGTCTTTGATGAAGCCCGGCCTATTATCAGGTaGGTCACATTCTGGGGCACGGTAGGCAAAGGCCAGTATCAAACG +
Preference number: 6 (lower is better)
Translates to: IHIMDVFDEARPIIR*VTFWGTVGKGQYQT
Trigger: CGTTTGATACTGGCCTTTGCCTACCGTGCCCCAGAATGTGACCAACCTGATAATAGGCCGGGCTTCATCAAAGACATCCATTATATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp ACCAGCTCTGCTTCCACACACCAGCATGCAGTGCTCTaGGTTGATGCAAGCTATATCATCAGTAAACAGTAT +
Preference number: 6 (lower is better)
Translates to: TSSASTHQHAVL*VDASYIISKQY
Trigger: ATACTGTTTACTGATGATATAGCTTGCATCAACCCAGAGCACTGCATGCTGGTGTGTGGAAGCAGAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS TCA 72 bp TTTTTAGTAACCCCAGCCAAGTCTGTAAACCATACGTaGACTGGACTACACAGAGCAACACAGCAGGGTCAA +
Preference number: 6 (lower is better)
Translates to: FLVTPAKSVNHT*TGLHRATQQGQ
Trigger: TTGACCCTGCTGTGTTGCTCTGTGTAGTCCAGTTCACGTATGGTTTACAGACTTGGCTGGGGTTACTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp ATCCACTCTCCACAAGACCATCAGCATTTACTCAGGTaGTGGAGGAGAAATTCTGAGTTGCAGCTAAGTCTA +
Preference number: 6 (lower is better)
Translates to: IHSPQDHQHLLR*WRRNSELQLSL
Trigger: TAGACTTAGCTGCAACTCAGAATTTCTCCTCCAGCACCTGAGTAAATGCTGATGGTCTTGTGGAGAGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp GCCAATCTCCATTATGCTAATAATCATAAGTGTAAGTaGCCCAATGATCATGAGCAGAGCCTGCAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: ANLHYANNHKCK*PNDHEQSLQSV
Trigger: GACACTCTGCAGGCTCTGCTCATGATCATTGGGGCACTTACACTTATGATTATTAGCATAATGGAGATTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 72 bp AGCAGGGTCAAAGTCTTTGTCCTTTGGTTTGCTGTCTaGATGGTGGTGGTTGTGATAAACTTTGAAGAAGAC +
Preference number: 6 (lower is better)
Translates to: SRVKVFVLWFAV*MVVVVINFEED
Trigger: GTCTTCTTCAAAGTTTATCACAACCACCACCATCAAGACAGCAAACCAAAGGACAAAGACTTTGACCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp GCTTCTTTCTTAGGGGAGACATTACAAGAATTTGTGTTGGAAAGGTaGTATGTCAATAAGATGGAAGTGACATCGGGTGAGGCCAACATG +
Preference number: 6 (lower is better)
Translates to: ASFLGETLQEFVLER*YVNKMEVTSGEANM
Trigger: CATGTTGGCCTCACCCGATGTCACTTCCATCTTATTGACATACAACCTTTCCAACACAAATTCTTGTAATGTCTCCCCTAAGAAAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CCA 72 bp TTAATGCTGTCTTCAGATTTCCCGTTGGGAATGATGTaGTTGATGGTCTCATTATTCTCACTGCATCTCAGA +
Preference number: 6 (lower is better)
Translates to: LMLSSDFPLGMM*LMVSLFSLHLR
Trigger: TCTGAGATGCAGTGAGAATAATGAGACCATCAACCACATCATTCCCAACGGGAAATCTGAAGACAGCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp GAGCAACACAGCAGGGTCAAAGTCTTTGTCCTTTGGTTTGCTGTCTaGATGGTGGTGGTTGTGATAAACTTTGAAGAAGACAGTTTAAAT +
Preference number: 6 (lower is better)
Translates to: EQHSRVKVFVLWFAV*MVVVVINFEEDSLN
Trigger: ATTTAAACTGTCTTCTTCAAAGTTTATCACAACCACCACCATCAAGACAGCAAACCAAAGGACAAAGACTTTGACCCTGCTGTGTTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 90 bp ATTTTCAGGGCTTCTTTCTTAGGGGAGACATTACAAGAATTTGTGTaGGAAAGGTTGTATGTCAATAAGATGGAAGTGACATCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: IFRASFLGETLQEFV*ERLYVNKMEVTSGE
Trigger: CTCACCCGATGTCACTTCCATCTTATTGACATACAACCTTTCCAACACAAATTCTTGTAATGTCTCCCCTAAGAAAGAAGCCCTGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS CAA 72 bp TTAGGGGAGACATTACAAGAATTTGTGTTGGAAAGGTaGTATGTCAATAAGATGGAAGTGACATCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: LGETLQEFVLER*YVNKMEVTSGE
Trigger: CTCACCCGATGTCACTTCCATCTTATTGACATACAACCTTTCCAACACAAATTCTTGTAATGTCTCCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381151.5
CDS GCA 72 bp ACAGCAAAAAGTCCAATATTTAGTATTACTTTAACTTaGCGAGTCTCTTCTAGCATCTGTAAACAAACAGCC +
Preference number: 6 (lower is better)
Translates to: TAKSPIFSITLT*RVSSSICKQTA
Trigger: GGCTGTTTGTTTACAGATGCTAGAAGAGACTCGGCAAGTTAAAGTAATACTAAATATTGGACTTTTTGCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381151.5