RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC5A10 (Homo sapiens)

Ensembl gene IDs: ENSG00000154025

Ensembl transcript IDs: ENST00000317977.10, ENST00000395643.6, ENST00000395645.4, ENST00000395647.6, ENST00000417251.6, ENST00000584658.1

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGGTCCCCTGACCCACCAGCCCTATTGTCCCAGCTGGGCGGCTaGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGAC +
Preference number: 1 (lower is better)
Translates to: LRSPDPPALLSQLGG*ESRVLCRCSICTAD
Trigger: GTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCAGCTGGGACAATAGGGCTGGTGGGTCAGGGGACCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CCA 90 bp GACCAGGACTCAGGTCCCCTGACCCACCAGCCCTATTGTCCCAGCTaGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCA +
Preference number: 1 (lower is better)
Translates to: DQDSGPLTHQPYCPS*AAGKAVFYVDAASA
Trigger: TGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCAGCTGGGACAATAGGGCTGGTGGGTCAGGGGACCTGAGTCCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR TCA 90 bp CACTTCTCTTGGGTGCCTCTGAGGGAGGGTGGGTTGCAGGGCTTCTaGAGGCACCCTACTAACCACCTCCTCTTCTTGCAGTCACCTGGG +
Preference number: 1 (lower is better)
Translates to: HFSWVPLREGGLQGF*RHPTNHLLFLQSPG
Trigger: CCCAGGTGACTGCAAGAAGAGGAGGTGGTTAGTAGGGTGCCTTCAGAAGCCCTGCAACCCACCCTCCCTCAGAGGCACCCAAGAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR TCA 90 bp GAGACCCCTCCTCACCTGTGGCAAATCACTTCTCTTGGGTGCCTCTaGGGGAGGGTGGGTTGCAGGGCTTCTGAAGGCACCCTACTAACC +
Preference number: 1 (lower is better)
Translates to: ETPPHLWQITSLGCL*GRVGCRASEGTLLT
Trigger: GGTTAGTAGGGTGCCTTCAGAAGCCCTGCAACCCACCCTCCCTCAGAGGCACCCAAGAGAAGTGATTTGCCACAGGTGAGGAGGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CCA 90 bp AAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATaGCTGCTGCAGAGTCGGGTAAATAAGATCCCAAGAGAAGCAGGG +
Preference number: 1 (lower is better)
Translates to: KAHSHGFVAWSQKLP*LLQSRVNKIPREAG
Trigger: CCCTGCTTCTCTTGGGATCTTATTTACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CCA 90 bp CGTCACTTTACAGTTTATAAGGCCCATTCTCATGGCTTTGTGGCCTaGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTAAATAAG +
Preference number: 1 (lower is better)
Translates to: RHFTVYKAHSHGFVA*SQKLPWLLQSRVNK
Trigger: CTTATTTACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATAAACTGTAAAGTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR TCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR TCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: APALLAWPVLGHRAAVQLRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR TCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 2 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR TCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGCTGCTGTGCAGCTGTaGGGGGAATCTGCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPAAVQL*GESAPL
Trigger: AAGAGGGGCAGATTCCCCTCACAGCTGCACAGCAGC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR GCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 2 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR-3UTR GCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCAGCTGTGAGGGGAATCTaGCCCTCTTGGGGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSAVRGI*PSWGLG
Trigger: CCCGAGGCCCCAAGAGGGGCAGATTCCCCTCACAGC...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR TCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTAGGACTCAGGTCCCCTaGCCCACCAGCCCTATTGTC +
Preference number: 2 (lower is better)
Translates to: SWLCGLESKATMAAAESGRTQVP*PTSPIV
Trigger: GACAATAGGGCTGGTGGGTCAGGGGACCTGAGTCCT...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR TCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTGGGTTGCAGGGCTTCTaGAGGCACCCTACTAACCAC +
Preference number: 2 (lower is better)
Translates to: SWLCGLESKATMAAAESGGLQGF*RHPTNH
Trigger: GTGGTTAGTAGGGTGCCTTCAGAAGCCCTGCAACCC...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR TCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR GCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTTGTAGATGCAGCATCTaGACAGCAGACAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: SWLCGLESKATMAAAESGCRCSI*TADRQG
Trigger: CCCCTGCCTGTCTGCTGTGCAGATGCTGCATCTACA...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR GCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 2 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 2 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR CCA 90 bp CTCTTAGCTGCACGTCACTTTACAGTTTATAAGGCCCATTCTCATGGCTTTGTGAGTCAAAAGCTACCATaGCTGCTGCAGAGTCGGGTA +
Preference number: 2 (lower is better)
Translates to: LLAARHFTVYKAHSHGFVSQKLP*LLQSRV
Trigger: TACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACT...CACAAAGCCATGAGAATGGGCCTTATAAACTGTAAAGTGACGTGCAGCTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
3UTR-3UTR TCA 90 bp CTCTTAGCTGCACGTCACTTTACAGTTTATAAGGCCCATTCTCATGGCTTTGTGAAATCTCACTGCTCCTaGCCCAGCCTGTGTATTCAA +
Preference number: 2 (lower is better)
Translates to: LLAARHFTVYKAHSHGFVKSHCS*PSLCIQ
Trigger: TTGAATACACAGGCTGGGTCAGGAGCAGTGAGATTT...CACAAAGCCATGAGAATGGGCCTTATAAACTGTAAAGTGACGTGCAGCTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
3UTR TCA 72 bp CAAAATCCCACCCTAAGGACCAGGACTCAGGTCCCCTaGCCCACCAGCCCTATTGTCCCAGCTGGGCGGCTG +
Preference number: 3 (lower is better)
Translates to: QNPTLRTRTQVP*PTSPIVPAGRL
Trigger: CAGCCGCCCAGCTGGGACAATAGGGCTGGTGGGTCAGGGGACCTGAGTCCTGGTCCTTAGGGTGGGATTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR TCA 72 bp GGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATG +
Preference number: 3 (lower is better)
Translates to: GPRDPHEGNGWT*GLRAPAFLSRM
Trigger: CATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR CCA 72 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTaGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATC +
Preference number: 3 (lower is better)
Translates to: FQGSRFAGLASS*APSCCAAVRGI
Trigger: GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR TCA 72 bp CCTCACCTGTGGCAAATCACTTCTCTTGGGTGCCTCTaGGGGAGGGTGGGTTGCAGGGCTTCTGAAGGCACC +
Preference number: 3 (lower is better)
Translates to: PHLWQITSLGCL*GRVGCRASEGT
Trigger: GGTGCCTTCAGAAGCCCTGCAACCCACCCTCCCTCAGAGGCACCCAAGAGAAGTGATTTGCCACAGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CCA 72 bp CCTGACCCACCAGCCCTATTGTCCCAGCTGGGCGGCTaGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGC +
Preference number: 3 (lower is better)
Translates to: PDPPALLSQLGG*ESRVLCRCSIC
Trigger: GCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCAGCTGGGACAATAGGGCTGGTGGGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR CAA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACATGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 3 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR-3UTR CAA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGTGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 3 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CCA 72 bp ACAGTTTATAAGGCCCATTCTCATGGCTTTGTGGCCTaGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGG +
Preference number: 3 (lower is better)
Translates to: TVYKAHSHGFVA*SQKLPWLLQSR
Trigger: CCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSGWPRV*LSARWG
Trigger: GCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQGWPRV*LSARWG
Trigger: GCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPGWPRV*LSARWG
Trigger: GCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGCTCCCCAGGACGGCTaGCCGCGTGTCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCAPQDG*PRVWLS
Trigger: GGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCCGCTGTTGGAGTCCTaGAGGACGGGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSPLLES*RTGIQA
Trigger: GGCCTGGATCCCCGTCCTGCAGGACTCCAACAGCGG...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLGWPRV*LSARWG
Trigger: GCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGCTCCCCAGGACGGCTaGCCGCGTGTCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSAPQDG*PRVWLS
Trigger: GGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGC...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTCTCTTGGGTGCCTCTaGGGGAGGGTGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSSLGCL*GRVGCR
Trigger: CCTGCAACCCACCCTCCCTCAGAGGCACCCAAGAGA...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCCTGCCGTCTCCCCTTaGCTCTGGCCAGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVPAVSP*LWPASL
Trigger: GAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGGCCAGAGCCCTCGCTaGTGGCGAAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSGQSPR*WRRGRL
Trigger: GAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTGGCC...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCAGCCCAGGCAGATGTaGACAAACAGAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSQPRQM*TNRAPA
Trigger: CGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTG...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGCCTGGGCGTAGGCTaGCTCCAGCTGCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCGLGVG*LQLPVT
Trigger: GGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCGCCGCCAGCATCACTaGGATCATCAGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCRRQHH*DHQPPQ
Trigger: CTGCGGGGGCTGATGATCGCAGTGATGCTGGCGGCG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGAGCCCGCCTTGGCATaGTTCAGGTCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLEPALA*FRSRAD
Trigger: GTCAGCCCGGGACCTGAACCATGCCAAGGCGGGCTC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGAGGCCCCCTGCTCGTTaGCACGTCGCCAGAAGACGC +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQRPPAR*HVARRR
Trigger: GCGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCT...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGCTCCCCAGGACGGCTaGCCGCGTGTCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGAPQDG*PRVWLS
Trigger: GGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGCTCCCCAGGACGGCTaGCCGCGTGTCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLAPQDG*PRVWLS
Trigger: GGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGGTCGCTGGTGGAGTTaGCGGCCATGGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCGRWWS*RPWLSC
Trigger: GCAGGACAGCCATGGCCGCCAACTCCACCAGCGACC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGCCCGCCAGTCCAATaGAGAGGCCAGAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVSPPVQ*RGQSPR
Trigger: GCGAGGGCTCTGGCCTCTTCATTGGACTGGCGGGCT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAACCTCCTGCCGCGCCTaGGCCCGCCAGTCCAATGAA +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSTSCRA*ARQSNE
Trigger: TTCATTGGACTGGCGGGCTCAGGCGCGGCAGGAGGT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCCATGGGGAGCATCTTaGGGTAGCTGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSPWGAS*GSWPGW
Trigger: CCATCCTGGCCAGCTACCTCAAGATGCTCCCCATGG...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGGCCAGAGCCCTCGCTaGTGGCGAAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPGQSPR*WRRGRL
Trigger: GAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTGGCC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGGCCAGAGCCCTCGCTaGTGGCGAAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLGQSPR*WRRGRL
Trigger: GAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTGGCC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGGCCAGAGCCCTCGCTaGTGGCGAAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGGQSPR*WRRGRL
Trigger: GAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTGGCC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCATTCCACTCGAAGCCTaGCACGGCCAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSIPLEA*HGQTSC
Trigger: GCAGGAGGTCTGGCCGTGGCAGGCTTCGAGTGGAAT...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGGCCTGGGCGTAGGCTaGCTCCAGCTGCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGGLGVG*LQLPVT
Trigger: GGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCCGCCGCCAGCATCACTaGGATCATCAGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPRRQHH*DHQPPQ
Trigger: CTGCGGGGGCTGATGATCGCAGTGATGCTGGCGGCG...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCACCGCTGTTGGAGTCCTaGAGGACGGGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSPLLES*RTGIQA
Trigger: GGCCTGGATCCCCGTCCTGCAGGACTCCAACAGCGG...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAGTGCAGGTAGTGGATaGTCCCCAGGACGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLSAGSG*SPGRLA
Trigger: GGCCAGCCGTCCTGGGGAGCATCCACTACCTGCACT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGCTGTGAGGGGAATCTaGCCCTCTTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIAVRGI*PSWGLG
Trigger: CCCGAGGCCCCAAGAGGGGCAGATTCCCCTCACAGC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCTGTGAGGGGAATCTaGCCCTCTTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCAVRGI*PSWGLG
Trigger: CCCGAGGCCCCAAGAGGGGCAGATTCCCCTCACAGC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGTTCAACTCCGGTGCTaGCCGAGACCCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLVQLRC*PRPLLT
Trigger: GGTGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAAC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCTGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCWSWRE*PGRRLP
Trigger: AGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCA...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLWSWRE*PGRRLP
Trigger: AGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCA...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCGGCAGGTCCCCTGTGTaGGGGTCTCGAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSGRSPV*GSRNMC
Trigger: GCACATGTTTCGAGACCCCCACACAGGGGACCTGCC...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCGAGCCCGCCTTGGCATaGTTCAGGTCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPEPALA*FRSRAD
Trigger: GTCAGCCCGGGACCTGAACCATGCCAAGGCGGGCTC...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGATGGAGCCCGCCTTaGCATGGTTCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCGWSPP*HGSGPG
Trigger: CCCGGGACCTGAACCATGCCAAGGCGGGCTCCATCC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGAGGCCCCCTGCTCGTTaGCACGTCGCCAGAAGACGC +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRRPPAR*HVARRR
Trigger: GCGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGACACTCTGTGGGGGTaGGGTCAGCAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCDTLWG*GQQASS
Trigger: GCTGGAAGCCTGCTGACCCCACCCCCACAGAGTGTC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCGGCTTGGCCAGTTCTTaGGCACCGAGCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSGLASS*APSCCA
Trigger: TGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCC...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCGAAGAGGCTCCCTCTaGCATTTGGGAGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCRRGSL*HLGAGG
Trigger: CCCACCGGCTCCCAAATGCCAGAGGGAGCCTCTTCG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGGTCGCTGGTGGAGTTaGCGGCCATGGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVGRWWS*RPWLSC
Trigger: GCAGGACAGCCATGGCCGCCAACTCCACCAGCGACC...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLCVPGV*RSLVEL
Trigger: CAACTCCACCAGCGACCTCCACACTCCCGGGACGCA...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGAGTTGGCGGCCATaGCTGTCCTGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIWSWRP*LSCRRH
Trigger: GTGCCTGCGGCAGGACAGCCATGGCCGCCAACTCCA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTGGAGTTGGCGGCCATaGCTGTCCTGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVWSWRP*LSCRRH
Trigger: GTGCCTGCGGCAGGACAGCCATGGCCGCCAACTCCA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTACCTCCTGCCGCGCCTaGGCCCGCCAGTCCAATGAA +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCTSCRA*ARQSNE
Trigger: TTCATTGGACTGGCGGGCTCAGGCGCGGCAGGAGGT...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCATGGGGAGCATCTTaGGGTAGCTGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQPWGAS*GSWPGW
Trigger: CCATCCTGGCCAGCTACCTCAAGATGCTCCCCATGG...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCCATGGGGAGCATCTTaGGGTAGCTGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCPWGAS*GSWPGW
Trigger: CCATCCTGGCCAGCTACCTCAAGATGCTCCCCATGG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGCCATGGGGAGCATCTTaGGGTAGCTGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLPWGAS*GSWPGW
Trigger: CCATCCTGGCCAGCTACCTCAAGATGCTCCCCATGG...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGTCAGCGACGACATaGGCGCCGCCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVRSATT*APPASL
Trigger: CAGTGATGCTGGCGGCGCTCATGTCGTCGCTGACCT...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGGTCAGCGACGACATaGGCGCCGCCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVRSATT*APPASL
Trigger: CAGTGATGCTGGCGGCGCTCATGTCGTCGCTGACCT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTCCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCPKGTS*ARVHQV
Trigger: TACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGG...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVPKGTS*ARVHQV
Trigger: TACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCCCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPPKGTS*ARVHQV
Trigger: TACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGG...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGCTGCTGTGCAGCTGTaGGGGGAATCTGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLAAVQL*GESAPL
Trigger: AAGAGGGGCAGATTCCCCTCACAGCTGCACAGCAGC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGAGGACTCAGGTCCCCTaGCCCACCAGCCCTATTGTC +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQRTQVP*PTSPIV
Trigger: GACAATAGGGCTGGTGGGTCAGGGGACCTGAGTCCT...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAGGACTCAGGTCCCCTaGCCCACCAGCCCTATTGTC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLRTQVP*PTSPIV
Trigger: GACAATAGGGCTGGTGGGTCAGGGGACCTGAGTCCT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGCAGGCTCAACTGCCTaGCGTCTCCCCTTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRAGSTA*RLPLPL
Trigger: CAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGC...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGGCCAGAGCCCTCGCTaGTGGCGAAGAGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPGQSPR*WRRGRL
Trigger: GAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTGGCC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCACAGCCCAGGCAGATGTaGACAAACAGAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSQPRQM*TNRAPA
Trigger: CGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTG...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCCAGCCCAGGCAGATGTaGACAAACAGAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPQPRQM*TNRAPA
Trigger: CGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTG...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGGCCTGGGCGTAGGCTaGCTCCAGCTGCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCGLGVG*LQLPVT
Trigger: GGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCCGCTGTTGGAGTCCTaGAGGACGGGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPPLLES*RTGIQA
Trigger: GGCCTGGATCCCCGTCCTGCAGGACTCCAACAGCGG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGCCCAGGACAAAGACTaGAGTCACTGGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLAQDKD*SHWWGQ
Trigger: CTGGCCCCACCAGTGACTGCAGTCTTTGTCCTGGGC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGGCCCAGGACAAAGACTaGAGTCACTGGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQAQDKD*SHWWGQ
Trigger: CTGGCCCCACCAGTGACTGCAGTCTTTGTCCTGGGC...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGTGCAGGTAGTGGATaGTCCCCAGGACGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVSAGSG*SPGRLA
Trigger: GGCCAGCCGTCCTGGGGAGCATCCACTACCTGCACT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGACGTGGGCTCCTAACTaGCTCCGGCCGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVTWAPN*LRPLCT
Trigger: TGTGCAGAGCGGCCGGAGGCAGTTAGGAGCCCACGT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGTCTCCCCTTGCCTCTaGCCAGCGAGCCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIVSPCL*PASLRW
Trigger: CCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGAC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGTGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVWSWRE*PGRRLP
Trigger: AGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCA...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTTGGCAATGGTCCTaGAGGGAATGGCCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSCWQWS*REWPGR
Trigger: ACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACA...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGGCAGGTCCCCTGTGTaGGGGTCTCGAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLGRSPV*GSRNMC
Trigger: GCACATGTTTCGAGACCCCCACACAGGGGACCTGCC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGGATGGAGCCCGCCTTaGCATGGTTCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPGWSPP*HGSGPG
Trigger: CCCGGGACCTGAACCATGCCAAGGCGGGCTCCATCC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGGTAGCTGGCCAGGATaGAGCCCGCCTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVGSWPG*SPPWHG
Trigger: ACCATGCCAAGGCGGGCTCCATCCTGGCCAGCTACC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCTGGCTCTCCGCACGGTaGGGCTGGGTTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCWLSAR*GWVQEF
Trigger: GAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCA...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCGWPRV*LSARWG
Trigger: GCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTCCCAGCTGGGCGGCTaGGAAAGCCGTGTTCTATGT +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSSQLGG*ESRVLC
Trigger: ACATAGAACACGGCTTTCCCAGCCGCCCAGCTGGGA...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGCCCTATTGTCCCAGCTaGGCGGCTGGGAAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRPYCPS*AAGKAV
Trigger: CACGGCTTTCCCAGCCGCCCAGCTGGGACAATAGGG...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTCCCTATTGTCCCAGCTaGGCGGCTGGGAAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCPYCPS*AAGKAV
Trigger: CACGGCTTTCCCAGCCGCCCAGCTGGGACAATAGGG...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGTGTGGAGGTCGCTGGTaGAGTTGGCGGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRCGGRW*SWRPWL
Trigger: CAGCCATGGCCGCCAACTCCACCAGCGACCTCCACA...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGAGTGTGGAGGTCGCTaGTGGAGTTGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRECGGR*WSWRPW
Trigger: CCATGGCCGCCAACTCCACCAGCGACCTCCACACTC...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGTGTGGAGGTCGCTaGTGGAGTTGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCECGGR*WSWRPW
Trigger: CCATGGCCGCCAACTCCACCAGCGACCTCCACACTC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCCVPGV*RSLVEL
Trigger: CAACTCCACCAGCGACCTCCACACTCCCGGGACGCA...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTGGAGTTGGCGGCCATaGCTGTCCTGCCGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLWSWRP*LSCRRH
Trigger: GTGCCTGCGGCAGGACAGCCATGGCCGCCAACTCCA...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCACCTCCTGCCGCGCCTaGGCCCGCCAGTCCAATGAA +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFTSCRA*ARQSNE
Trigger: TTCATTGGACTGGCGGGCTCAGGCGCGGCAGGAGGT...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCACCTCCTGCCGCGCCTaGGCCCGCCAGTCCAATGAA +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGTSCRA*ARQSNE
Trigger: TTCATTGGACTGGCGGGCTCAGGCGCGGCAGGAGGT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGGTCAGCGACGACATaGGCGCCGCCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGRSATT*APPASL
Trigger: CAGTGATGCTGGCGGCGCTCATGTCGTCGCTGACCT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCCACAACAGCACCACTaGGTGCAAAGAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCPQQHH*VQRGRQ
Trigger: CTGTCGCCCTCTTTGCACTCAGTGGTGCTGTTGTGG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGACCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGPKGTS*ARVHQV
Trigger: TACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGG...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGCTGCTGTGCAGCTGTaGGGGGAATCTGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIAAVQL*GESAPL
Trigger: AAGAGGGGCAGATTCCCCTCACAGCTGCACAGCAGC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGACGGCCTTGGACTaGACGTGGGCTCCTAACTGC +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIWTALD*TWAPNC
Trigger: GCAGTTAGGAGCCCACGTTCAGTCCAAGGCCGTCCA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCATGGACGGCCTTGGACTaGACGTGGGCTCCTAACTGC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSWTALD*TWAPNC
Trigger: GCAGTTAGGAGCCCACGTTCAGTCCAAGGCCGTCCA...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGCAGTGAGCCAAGACTaGGCCATTGCAGTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCAVSQD*AIAVQP
Trigger: AGGCTGGACTGCAATGGCGCAGTCTTGGCTCACTGC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAATTCCACTCGAAGCCTaGCACGGCCAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSIPLEA*HGQTSC
Trigger: GCAGGAGGTCTGGCCGTGGCAGGCTTCGAGTGGAAT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGATTCCACTCGAAGCCTaGCACGGCCAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRIPLEA*HGQTSC
Trigger: GCAGGAGGTCTGGCCGTGGCAGGCTTCGAGTGGAAT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAACACCCATGCCAGTaGCAGCAGCACGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCEHPCQ*QQHVRG
Trigger: GCCACGTACGTGCTGCTGGCACTGGCATGGGTGTTC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCGAACACCCATGCCAGTaGCAGCAGCACGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPEHPCQ*QQHVRG
Trigger: GCCACGTACGTGCTGCTGGCACTGGCATGGGTGTTC...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCAGCCCAGGCAGATGTaGACAAACAGAGCCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPQPRQM*TNRAPA
Trigger: CGCGGGGGCTCTGTTTGTGCACATCTGCCTGGGCTG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCCGCCGCCAGCATCACTaGGATCATCAGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCRRQHH*DHQPPQ
Trigger: CTGCGGGGGCTGATGATCGCAGTGATGCTGGCGGCG...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCGCCGCCAGCATCACTaGGATCATCAGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFRRQHH*DHQPPQ
Trigger: CTGCGGGGGCTGATGATCGCAGTGATGCTGGCGGCG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGCCGCTGTTGGAGTCCTaGAGGACGGGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPPLLES*RTGIQA
Trigger: GGCCTGGATCCCCGTCCTGCAGGACTCCAACAGCGG...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCGCCCAGGACAAAGACTaGAGTCACTGGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPAQDKD*SHWWGQ
Trigger: CTGGCCCCACCAGTGACTGCAGTCTTTGTCCTGGGC...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAGTGCAGGTAGTGGATaGTCCCCAGGACGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLSAGSG*SPGRLA
Trigger: GGCCAGCCGTCCTGGGGAGCATCCACTACCTGCACT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGCTGTGAGGGGAATCTaGCCCTCTTGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCAVRGI*PSWGLG
Trigger: CCCGAGGCCCCAAGAGGGGCAGATTCCCCTCACAGC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAAAGTTCAACTCCGGTaGTGCCCGAGACCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCKVQLR*CPRPLL
Trigger: GAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTT...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCACTCACGCCGATGAGTaGCACTATGACCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCTHADE*HYDQPS
Trigger: GGACGGCTGGTCATAGTGGCACTCATCGGCGTGAGT...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTAGCAGCCAGGCCCCCTaGGATGGTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCSSQAP*DGVQGC
Trigger: ACAGCCCTGTACACCATCGCAGGGGGCCTGGCTGCT...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGTGTTGGCAATGGTCCTaGAGGGAATGGCCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQCWQWS*REWPGR
Trigger: ACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACA...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCATGGCGTCTGTACGTaGCAGGTGGCAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQHGVCT*QVAGGV
Trigger: AACACCACCTGCCACCTGCCACGTACAGACGCCATG...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGGCAGGTCCCCTGTGTaGGGGTCTCGAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVGRSPV*GSRNMC
Trigger: GCACATGTTTCGAGACCCCCACACAGGGGACCTGCC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGCTGCACGATGACCTaGTCGGTGCACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVRCTMT*SVHQYQ
Trigger: CTGGTACTGGTGCACCGACCAGGTCATCGTGCAGCG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCGAGCCCGCCTTGGCATaGTTCAGGTCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFEPALA*FRSRAD
Trigger: GTCAGCCCGGGACCTGAACCATGCCAAGGCGGGCTC...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGAGCCCGCCTTGGCATaGTTCAGGTCCCGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPEPALA*FRSRAD
Trigger: GTCAGCCCGGGACCTGAACCATGCCAAGGCGGGCTC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGGTAGCTGGCCAGGATaGAGCCCGCCTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPGSWPG*SPPWHG
Trigger: ACCATGCCAAGGCGGGCTCCATCCTGGCCAGCTACC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGAGTTGCCCGCTGTTaGAGTCCTGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVRVARC*SPAGRG
Trigger: TCCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTAGAGTTGCCCGCTGTTaGAGTCCTGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCRVARC*SPAGRG
Trigger: TCCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCT...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGGCCCCCTGCTCGTTaGCACGTCGCCAGAAGACGC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPRPPAR*HVARRR
Trigger: GCGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGTCCGCACGGTGGGGCTaGGTTCAGGAATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRSARWG*VQEFQD
Trigger: GTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGA...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCTCCGCACGGTGGGGCTaGGTTCAGGAATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPSARWG*VQEFQD
Trigger: GTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGA...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGACACTCTGTGGGGGTaGGGTCAGCAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLDTLWG*GQQASS
Trigger: GCTGGAAGCCTGCTGACCCCACCCCCACAGAGTGTC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAATCTGGACACTCTGTaGGGGTGGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLNLDTL*GWGQQA
Trigger: AGCCTGCTGACCCCACCCCCACAGAGTGTCCAGATT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGGCTTGGCCAGTTCTTaGGCACCGAGCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVGLASS*APSCCA
Trigger: TGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCC...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGGCTTGGCCAGTTCTTaGGCACCGAGCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIGLASS*APSCCA
Trigger: TGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCACATCATTGAGGTCCTaGAGCGCCCAGACCCCCACT +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCTSLRS*SAQTPT
Trigger: AGTGGGGGTCTGGGCGCTCCAGGACCTCAATGATGT...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGATGTGGAGGTCGCTGGTaGAGTTGGCGGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGCGGRW*SWRPWL
Trigger: CAGCCATGGCCGCCAACTCCACCAGCGACCTCCACA...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTGTGGAGGTCGCTGGTaGAGTTGGCGGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPCGGRW*SWRPWL
Trigger: CAGCCATGGCCGCCAACTCCACCAGCGACCTCCACA...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGAGTGTGGAGGTCGCTaGTGGAGTTGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPECGGR*WSWRPW
Trigger: CCATGGCCGCCAACTCCACCAGCGACCTCCACACTC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGTGTGGAGGTCGCTaGTGGAGTTGGCGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCECGGR*WSWRPW
Trigger: CCATGGCCGCCAACTCCACCAGCGACCTCCACACTC...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCAGCCCCCGCAGACCTaGGAACAATGCGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPQPPQT*EQCAAD
Trigger: ATCAGCCGCGCATTGTTCCCAGGTCTGCGGGGGCTG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417251.6
CDS-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCAGCAGCATTGGCTCTaGGACCGTTGGCTAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCQQHWL*DRWLGL
Trigger: AAGACCTAGCCAACGGTCTCAGAGCCAATGCTGCTG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR TCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAAAGGAAGTCACTGCTaGGAGAACCCTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLKGSHC*ENPQAG
Trigger: GCCTGCCTGAGGGTTCTCTCAGCAGTGACTTCCTTT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR TCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCATGGGGAGCATCTTaGGGTAGCTGGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLPWGAS*GSWPGW
Trigger: CCATCCTGGCCAGCTACCTCAAGATGCTCCCCATGG...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGGTCAGCGACGACATaGGCGCCGCCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPRSATT*APPASL
Trigger: CAGTGATGCTGGCGGCGCTCATGTCGTCGCTGACCT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGCCAGCCAGAGATCCATaGCCACGAGGCCTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRPARDP*PRGLGD
Trigger: ATCTCCTAGGCCTCGTGGTCATGGATCTCTGGCTGG...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR TCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCCCACAACAGCACCACTaGGTGCAAAGAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIPQQHH*VQRGRQ
Trigger: CTGTCGCCCTCTTTGCACTCAGTGGTGCTGTTGTGG...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFPKGTS*ARVHQV
Trigger: TACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCTCAGGCAGGCTCAACTaGCTGCCGTCTCCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGSGRLN*LPSPLA
Trigger: GGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGA...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCCGTCATGTCCCGGCCTaGCAGGAAGTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPRHVPA*QEVAIH
Trigger: GTGAATGGCTACTTCCTGGCAGGCCGGGACATGACG...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCCGTCATGTCCCGGCCTaGCAGGAAGTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIRHVPA*QEVAIH
Trigger: GTGAATGGCTACTTCCTGGCAGGCCGGGACATGACG...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCGTCATGTCCCGGCCTaGCAGGAAGTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVRHVPA*QEVAIH
Trigger: GTGAATGGCTACTTCCTGGCAGGCCGGGACATGACG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGAACACCCATGCCAGTaGCAGCAGCACGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGEHPCQ*QQHVRG
Trigger: GCCACGTACGTGCTGCTGGCACTGGCATGGGTGTTC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGGCCTGGGCGTAGGCTaGCTCCAGCTGCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCGLGVG*LQLPVT
Trigger: GGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACAGGCCTGGGCGTAGGCTaGCTCCAGCTGCCCGTAACC +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTGLGVG*LQLPVT
Trigger: GGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCC...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLGSRNM*MASVRG
Trigger: GCCACGTACAGACGCCATGCACATGTTTCGAGACCC...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCGSRNM*MASVRG
Trigger: GCCACGTACAGACGCCATGCACATGTTTCGAGACCC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCTGACAGTGATCGCTaGACGATGACCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCADSDR*TMTWSV
Trigger: CACCGACCAGGTCATCGTGCAGCGATCACTGTCAGC...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGCTGACAGTGATCGCTaGACGATGACCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVADSDR*TMTWSV
Trigger: CACCGACCAGGTCATCGTGCAGCGATCACTGTCAGC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGCTGACAGTGATCGCTaGACGATGACCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRADSDR*TMTWSV
Trigger: CACCGACCAGGTCATCGTGCAGCGATCACTGTCAGC...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGCAGGTAGTGGATaGTCCCCAGGACGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGSAGSG*SPGRLA
Trigger: GGCCAGCCGTCCTGGGGAGCATCCACTACCTGCACT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCAAAGTTCAACTCCGGTaGTGCCCGAGACCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIKVQLR*CPRPLL
Trigger: GAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTT...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGACTCACGCCGATGAGTaGCACTATGACCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRTHADE*HYDQPS
Trigger: GGACGGCTGGTCATAGTGGCACTCATCGGCGTGAGT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGCAGCCAGGCCCCCTaGGATGGTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGSSQAP*DGVQGC
Trigger: ACAGCCCTGTACACCATCGCAGGGGGCCTGGCTGCT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCAGCAGCCAGGCCCCCTaGGATGGTGTACAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCSSQAP*DGVQGC
Trigger: ACAGCCCTGTACACCATCGCAGGGGGCCTGGCTGCT...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGTGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPWSWRE*PGRRLP
Trigger: AGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCA...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCTGTTGGCAATGGTCCTaGAGGGAATGGCCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPCWQWS*REWPGR
Trigger: ACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACA...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGTGTTGGCAATGGTCCTaGAGGGAATGGCCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVCWQWS*REWPGR
Trigger: ACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACA...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVGGRWC*QWSWRE
Trigger: TTCCCTCCAGGACCATTGCCAACACCACCTGCCACC...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVGGRWC*QWSWRE
Trigger: TTCCCTCCAGGACCATTGCCAACACCACCTGCCACC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCATGGCGTCTGTACGTaGCAGGTGGCAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVHGVCT*QVAGGV
Trigger: AACACCACCTGCCACCTGCCACGTACAGACGCCATG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTGGCAGGTCCCCTGTGTaGGGGTCTCGAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPGRSPV*GSRNMC
Trigger: GCACATGTTTCGAGACCCCCACACAGGGGACCTGCC...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCGCTGCACGATGACCTaGTCGGTGCACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPRCTMT*SVHQYQ
Trigger: CTGGTACTGGTGCACCGACCAGGTCATCGTGCAGCG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTAGAGTTGCCCGCTGTTaGAGTCCTGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCRVARC*SPAGRG
Trigger: TCCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCT...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAGAGTTGCCCGCTGTTaGAGTCCTGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLRVARC*SPAGRG
Trigger: TCCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTCCGCACGGTGGGGCTaGGTTCAGGAATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPSARWG*VQEFQD
Trigger: GTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGA...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGACACTCTGTGGGGGTaGGGTCAGCAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPDTLWG*GQQASS
Trigger: GCTGGAAGCCTGCTGACCCCACCCCCACAGAGTGTC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTAATCTGGACACTCTGTaGGGGTGGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCNLDTL*GWGQQA
Trigger: AGCCTGCTGACCCCACCCCCACAGAGTGTCCAGATT...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGAATCTGGACACTCTGTaGGGGTGGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRNLDTL*GWGQQA
Trigger: AGCCTGCTGACCCCACCCCCACAGAGTGTCCAGATT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATGGTTGAGGGATGGTaGGCAGGGAGGGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGMVEGW*AGREGE
Trigger: TTCGCCCTCCCTCCCTGCCCACCATCCCTCAACCAT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCTGTGGAGGTCGCTGGTaGAGTTGGCGGCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGCGGRW*SWRPWL
Trigger: CAGCCATGGCCGCCAACTCCACCAGCGACCTCCACA...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPCVPGV*RSLVEL
Trigger: CAACTCCACCAGCGACCTCCACACTCCCGGGACGCA...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAAGGCTGCTTTGCACTaGTCAGGAGGACCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGKAALH*SGGPSW
Trigger: CCAGCTGGGTCCTCCTGATCAGTGCAAAGCAGCCTT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTAGCCCGCCAGTCCAATaGAGAGGCCAGAGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCSPPVQ*RGQSPR
Trigger: GCGAGGGCTCTGGCCTCTTCATTGGACTGGCGGGCT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCAGTACCAGGTGGCCATaGTGGTCAGGCCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPSTRWP*WSGQRS
Trigger: TGACCTTTGGCCTGACCATCATGGCCACCTGGTACT...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCTGACTGCATGTAGATaGAGAGTTGCCCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCLTACR*RVARCW
Trigger: CCAACAGCGGGCAACTCTTCATCTACATGCAGTCAG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCGGAAATGGGTGGACCTaGGGACTCAGAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGGNGWT*GLRAPA
Trigger: GGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCC...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCGCTGCTGTGCAGCTGTaGGGGGAATCTGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFAAVQL*GESAPL
Trigger: AAGAGGGGCAGATTCCCCTCACAGCTGCACAGCAGC...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCGTCATGTCCCGGCCTaGCAGGAAGTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLRHVPA*QEVAIH
Trigger: GTGAATGGCTACTTCCTGGCAGGCCGGGACATGACG...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGATTCCACTCGAAGCCTaGCACGGCCAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPIPLEA*HGQTSC
Trigger: GCAGGAGGTCTGGCCGTGGCAGGCTTCGAGTGGAAT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCATTCCACTCGAAGCCTaGCACGGCCAGACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFIPLEA*HGQTSC
Trigger: GCAGGAGGTCTGGCCGTGGCAGGCTTCGAGTGGAAT...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCGAACACCCATGCCAGTaGCAGCAGCACGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGEHPCQ*QQHVRG
Trigger: GCCACGTACGTGCTGCTGGCACTGGCATGGGTGTTC...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGCTGACAGTGATCGCTaGACGATGACCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGADSDR*TMTWSV
Trigger: CACCGACCAGGTCATCGTGCAGCGATCACTGTCAGC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGCTGACAGTGATCGCTaGACGATGACCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLADSDR*TMTWSV
Trigger: CACCGACCAGGTCATCGTGCAGCGATCACTGTCAGC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGACGCCGCCAGCATCACTaGGATCATCAGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGRRQHH*DHQPPQ
Trigger: CTGCGGGGGCTGATGATCGCAGTGATGCTGGCGGCG...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTCCGCTGTTGGAGTCCTaGAGGACGGGGATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSPLLES*RTGIQA
Trigger: GGCCTGGATCCCCGTCCTGCAGGACTCCAACAGCGG...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGCCCAGGACAAAGACTaGAGTCACTGGTGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCAQDKD*SHWWGQ
Trigger: CTGGCCCCACCAGTGACTGCAGTCTTTGTCCTGGGC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAACAGCACCACTGAGTaGAAAGAGGGCGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLNSTTE*KEGDSE
Trigger: TTCGCTGTCGCCCTCTTTGCACTCAGTGGTGCTGTT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTAGATGCAGCATCTaGACAGCAGACAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGICRCSI*TADRQG
Trigger: CCCCTGCCTGTCTGCTGTGCAGATGCTGCATCTACA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCATCATCTGGGAACAATaGGCGGCTGATCATGCCCGG +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPIIWEQ*AADHAR
Trigger: CCGGGCATGATCAGCCGCGCATTGTTCCCAGATGAT...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395643.6
ENST00000395645.4
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGCCAGCGAGCCTCAGATaGTGTTTACTTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLPASLR*CLLPKP
Trigger: TGGCTTGGGAAGTAAACACCATCTGAGGCTCGCTGG...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGCTGAGGAGATGTAGATaGGCACGAACACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLLRRCR*ARTPMP
Trigger: TGGCATGGGTGTTCGTGCCCATCTACATCTCCTCAG...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLGGRWC*QWSWRE
Trigger: TTCCCTCCAGGACCATTGCCAACACCACCTGCCACC...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGGGRWC*QWSWRE
Trigger: TTCCCTCCAGGACCATTGCCAACACCACCTGCCACC...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCATGGCGTCTGTACGTaGCAGGTGGCAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLHGVCT*QVAGGV
Trigger: AACACCACCTGCCACCTGCCACGTACAGACGCCATG...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGGCAGGTCCCCTGTGTaGGGGTCTCGAAACATGTGC +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCGRSPV*GSRNMC
Trigger: GCACATGTTTCGAGACCCCCACACAGGGGACCTGCC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGGATGGAGCCCGCCTTaGCATGGTTCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGGWSPP*HGSGPG
Trigger: CCCGGGACCTGAACCATGCCAAGGCGGGCTCCATCC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGGATGGAGCCCGCCTTaGCATGGTTCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSGWSPP*HGSGPG
Trigger: CCCGGGACCTGAACCATGCCAAGGCGGGCTCCATCC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGATACCGCTCCAATGGTaGTGTTTCGGGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLIPLQW*CFGQEE
Trigger: TTCCTCCTGCCCGAAACACCACCATTGGAGCGGTAT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTAGGCCCCCTGCTCGTTaGCACGTCGCCAGAAGACGC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCRPPAR*HVARRR
Trigger: GCGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGGCTCTCCGCACGGTaGGGCTGGGTTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFWLSAR*GWVQEF
Trigger: GAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCA...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAATCTGGACACTCTGTaGGGGTGGGGTCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLNLDTL*GWGQQA
Trigger: AGCCTGCTGACCCCACCCCCACAGAGTGTCCAGATT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCAGAAGGCGTGTTTCTaGGGTGTTTGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQQKACF*GVWPSP
Trigger: AGGTGATGGCCAAACACCCCAGAAACACGCCTTCTG...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGCCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCATGGTTGAGGGATGGTaGGCAGGGAGGGAGGGCGAA +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGMVEGW*AGREGE
Trigger: TTCGCCCTCCCTCCCTGCCCACCATCCCTCAACCAT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGGCAAATCACTTCTCTTaGGTGCCTCTGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQANHFS*VPLREG
Trigger: ACCCTCCCTCAGAGGCACCCAAGAGAAGTGATTTGC...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGACCCCTCCTCACCTGTaGCAAATCACTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLTPPHL*QITSLG
Trigger: CCCAAGAGAAGTGATTTGCCACAGGTGAGGAGGGGT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTCCCAGCTGGGCGGCTaGGAAAGCCGTGTTCTATGT +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLSQLGG*ESRVLC
Trigger: ACATAGAACACGGCTTTCCCAGCCGCCCAGCTGGGA...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGGTCGCTGGTGGAGTTaGCGGCCATGGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGGRWWS*RPWLSC
Trigger: GCAGGACAGCCATGGCCGCCAACTCCACCAGCGACC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
3UTR CAA 72 bp TTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FSGLPLCWLGQF*GTELLCSCEGN
Trigger: ATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGTACCAGGTGGCCATaGTGGTCAGGCCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGSTRWP*WSGQRS
Trigger: TGACCTTTGGCCTGACCATCATGGCCACCTGGTACT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTAGGTCAGCGACGACATaGGCGCCGCCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCRSATT*APPASL
Trigger: CAGTGATGCTGGCGGCGCTCATGTCGTCGCTGACCT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCTGACTGCATGTAGATaGAGAGTTGCCCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVLTACR*RVARCW
Trigger: CCAACAGCGGGCAACTCTTCATCTACATGCAGTCAG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCACTGACTGCATGTAGATaGAGAGTTGCCCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSLTACR*RVARCW
Trigger: CCAACAGCGGGCAACTCTTCATCTACATGCAGTCAG...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGGGAGCTGGTCACTaGCTGCATGTAGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVQGAGH*LHVDEE
Trigger: CTCTTCATCTACATGCAGTCAGTGACCAGCTCCCTG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCCAGGGAGCTGGTCACTaGCTGCATGTAGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIQGAGH*LHVDEE
Trigger: CTCTTCATCTACATGCAGTCAGTGACCAGCTCCCTG...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGCCTCGGGATCCCCATaGGGGAAATGGGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCASGSP*GKWVDL
Trigger: CAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGAGACCCTTAGAACCCTaGGTGCTGGCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLRPLEP*VLANLT
Trigger: AGTGAGATTTGCCAGCACTCAGGGTTCTAAGGGTCT...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCGGGTTGCAGGGCTTCTaGAGGCACCCTACTAACCAC +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCGLQGF*RHPTNH
Trigger: GTGGTTAGTAGGGTGCCTTCAGAAGCCCTGCAACCC...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACATCTCTTGGGTGCCTCTaGGGGAGGGTGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTSLGCL*GRVGCR
Trigger: CCTGCAACCCACCCTCCCTCAGAGGCACCCAAGAGA...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCGSRNM*MASVRG
Trigger: GCCACGTACAGACGCCATGCACATGTTTCGAGACCC...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCAACAGCACCACTGAGTaGAAAGAGGGCGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPNSTTE*KEGDSE
Trigger: TTCGCTGTCGCCCTCTTTGCACTCAGTGGTGCTGTT...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAACAGCACCACTGAGTaGAAAGAGGGCGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVNSTTE*KEGDSE
Trigger: TTCGCTGTCGCCCTCTTTGCACTCAGTGGTGCTGTT...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGGACTCAGAGCTCCTaGCTTTCTGTCCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGRTQSS*LSVQDG
Trigger: GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTACGTGGGCTCCTAACTaGCTCCGGCCGCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSTWAPN*LRPLCT
Trigger: TGTGCAGAGCGGCCGGAGGCAGTTAGGAGCCCACGT...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGATGTAGATGCAGCATCTaGACAGCAGACAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGCRCSI*TADRQG
Trigger: CCCCTGCCTGTCTGCTGTGCAGATGCTGCATCTACA...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGGACAAGAGGACCATATaGCCACGGCCACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVDKRTI*PRPHSE
Trigger: CTCTGAATGTGGCCGTGGGCATATGGTCCTCTTGTC...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGACTCACGCCGATGAGTaGCACTATGACCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPTHADE*HYDQPS
Trigger: GGACGGCTGGTCATAGTGGCACTCATCGGCGTGAGT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACACAGAGCCCTCGCTGCTaGCGAAGAGGGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTQSPRC*RRGRLQ
Trigger: TTGGAGCCTCCCTCTTCGCCAGCAGCGAGGGCTCTG...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCACTGAGGAGATGTAGATaGGCACGAACACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSLRRCR*ARTPMP
Trigger: TGGCATGGGTGTTCGTGCCCATCTACATCTCCTCAG...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTAGGTGGTGTTGGCAATaGTCCTGGAGGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPRWCWQ*SWREWP
Trigger: AGGCCATTCCCTCCAGGACCATTGCCAACACCACCT...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGGTGGTGTTGGCAATaGTCCTGGAGGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGRWCWQ*SWREWP
Trigger: AGGCCATTCCCTCCAGGACCATTGCCAACACCACCT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGGGRWC*QWSWRE
Trigger: TTCCCTCCAGGACCATTGCCAACACCACCTGCCACC...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTCTCGAAACATGTGCATaGCGTCTGTACGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCLETCA*RLYVAG
Trigger: ACCTGCCACGTACAGACGCCATGCACATGTTTCGAG...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCCTCGAAACATGTGCATaGCGTCTGTACGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LASSWAPSCCAAVRGICPLETCA*RLYVAG
Trigger: ACCTGCCACGTACAGACGCCATGCACATGTTTCGAG...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCTCGAAACATGTGCATaGCGTCTGTACGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVLETCA*RLYVAG
Trigger: ACCTGCCACGTACAGACGCCATGCACATGTTTCGAG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGGTAGCTGGCCAGGATaGAGCCCGCCTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGGSWPG*SPPWHG
Trigger: ACCATGCCAAGGCGGGCTCCATCCTGGCCAGCTACC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGGTAGCTGGCCAGGATaGAGCCCGCCTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSGSWPG*SPPWHG
Trigger: ACCATGCCAAGGCGGGCTCCATCCTGGCCAGCTACC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGGTAGCTGGCCAGGATaGAGCCCGCCTTGGCATGGT +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCGSWPG*SPPWHG
Trigger: ACCATGCCAAGGCGGGCTCCATCCTGGCCAGCTACC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGACACTCTGTGGGGGTaGGGTCAGCAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCDTLWG*GQQASS
Trigger: GCTGGAAGCCTGCTGACCCCACCCCCACAGAGTGTC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGACACTCTGTGGGGGTaGGGTCAGCAGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSDTLWG*GQQASS
Trigger: GCTGGAAGCCTGCTGACCCCACCCCCACAGAGTGTC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGTAAGGTTCTCAATCTaGACACTCTGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVVRFSI*TLCGGG
Trigger: CCCACCCCCACAGAGTGTCCAGATTGAGAACCTTAC...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCACAGAAGGCGTGTTTCTaGGGTGTTTGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSQKACF*GVWPSP
Trigger: AGGTGATGGCCAAACACCCCAGAAACACGCCTTCTG...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGAAGGCGTGTTTCTaGGGTGTTTGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVQKACF*GVWPSP
Trigger: AGGTGATGGCCAAACACCCCAGAAACACGCCTTCTG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCGCAAATCACTTCTCTTaGGTGCCTCTGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIANHFS*VPLREG
Trigger: ACCCTCCCTCAGAGGCACCCAAGAGAAGTGATTTGC...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCACCCCTCCTCACCTGTaGCAAATCACTTCTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGITPPHL*QITSLG
Trigger: CCCAAGAGAAGTGATTTGCCACAGGTGAGGAGGGGT...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGCATGGCTTTGTGGCCTaGAGTCAAAAGCTACCATGG +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLHGFVA*SQKLPW
Trigger: CCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATG...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCCVPGV*RSLVEL
Trigger: CAACTCCACCAGCGACCTCCACACTCCCGGGACGCA...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTCACCGTGTTCCTACTaGCCCGACAAGAGGACCATA +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGISPCSY*PDKRTI
Trigger: TATGGTCCTCTTGTCGGGCCAGTAGGAACACGGTGA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTCACCGTGTTCCTACTaGCCCGACAAGAGGACCATA +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVSPCSY*PDKRTI
Trigger: TATGGTCCTCTTGTCGGGCCAGTAGGAACACGGTGA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTTCACCGTGTTCCTACTaGCCCGACAAGAGGACCATA +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCSPCSY*PDKRTI
Trigger: TATGGTCCTCTTGTCGGGCCAGTAGGAACACGGTGA...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGTGTACTCAGGTAAGGTaGCGATCTCTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQCTQVR*RSLRRC
Trigger: ACATCTCCTCAGAGATCGTCACCTTACCTGAGTACA...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACAAAGCTGAGACGGCTTTaGGGGGCTGGGGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTKLRRL*GAGGVE
Trigger: CTCAACACCCCCAGCCCCTCAAAGCCGTCTCAGCTT...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR TCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCAGGGAGCTGGTCACTaGCTGCATGTAGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPQGAGH*LHVDEE
Trigger: CTCTTCATCTACATGCAGTCAGTGACCAGCTCCCTG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGCTGCTGTGCAGCTGTaGGGGGAATCTGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSAAVQL*GESAPL
Trigger: AAGAGGGGCAGATTCCCCTCACAGCTGCACAGCAGC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAAATCTCACTGCTCCTaGCCCAGCCTGTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCKSHCS*PSLCIQ
Trigger: TTGAATACACAGGCTGGGTCAGGAGCAGTGAGATTT...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPGSRNM*MASVRG
Trigger: GCCACGTACAGACGCCATGCACATGTTTCGAGACCC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCACTCACGCCGATGAGTaGCACTATGACCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGTHADE*HYDQPE
Trigger: CTCTGGCTGGTCATAGTGGCACTCATCGGCGTGAGT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTGTTTGGCCATCACCTaGTTTAGTTCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVCLAIT*FSSQGH
Trigger: GTGCCCTTGGGAACTAAAGCAGGTGATGGCCAAACA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTTTGGCCATCACCTaGTTTAGTTCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGICLAIT*FSSQGH
Trigger: GTGCCCTTGGGAACTAAAGCAGGTGATGGCCAAACA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGGCACCGAGCTGCTGTaGAGCTGTGAGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGGTELL*SCEGNL
Trigger: CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGACAAGAGGACCATATaGCCACGGCCACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCDKRTI*PRPHSE
Trigger: CTCTGAATGTGGCCGTGGGCATATGGTCCTCTTGTC...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCAGGTGGTGTTGGCAATaGTCCTGGAGGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCRWCWQ*SWREWP
Trigger: AGGCCATTCCCTCCAGGACCATTGCCAACACCACCT...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGGTGGTGTTGGCAATaGTCCTGGAGGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPRWCWQ*SWREWP
Trigger: AGGCCATTCCCTCCAGGACCATTGCCAACACCACCT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGACTCGAAACATGTGCATaGCGTCTGTACGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGLETCA*RLYVAG
Trigger: ACCTGCCACGTACAGACGCCATGCACATGTTTCGAG...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCTCGAAACATGTGCATaGCGTCTGTACGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPLETCA*RLYVAG
Trigger: ACCTGCCACGTACAGACGCCATGCACATGTTTCGAG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTCGCTGCACGATGACCTaGTCGGTGCACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGRCTMT*SVHQYQ
Trigger: CTGGTACTGGTGCACCGACCAGGTCATCGTGCAGCG...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGACGCTGCACGATGACCTaGTCGGTGCACCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGRCTMT*SVHQYQ
Trigger: CTGGTACTGGTGCACCGACCAGGTCATCGTGCAGCG...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCGAGATACCGCTCCAATaGTGGTGTTTCGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGEIPLQ*WCFGQE
Trigger: CTCCTGCCCGAAACACCACCATTGGAGCGGTATCTC...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTAGAGTTGCCCGCTGTTaGAGTCCTGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSRVARC*SPAGRG
Trigger: TCCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCT...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTTCCGCACGGTGGGGCTaGGTTCAGGAATTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSSARWG*VQEFQD
Trigger: GTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGA...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCTCTCCGCACGGTaGGGCTGGGTTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGWLSAR*GWVQEF
Trigger: GAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCA...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACACCCGCTTTGCTGGCTTaGCCAGTTCTTGGGCACCGA +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTPALLA*PVLGHR
Trigger: TCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGG...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTTCACCGTGTTCCTACTaGCCCGACAAGAGGACCATA +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCSPCSY*PDKRTI
Trigger: TATGGTCCTCTTGTCGGGCCAGTAGGAACACGGTGA...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGCAGCCCACATCATCTaGGAACAATGCGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPAAHII*EQCAAD
Trigger: ATCAGCCGCGCATTGTTCCCAGATGATGTGGGCTGC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395643.6
ENST00000395645.4
CDS-3UTR TCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTTGTACTCAGGTAAGGTaGCGATCTCTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCCTQVR*RSLRRC
Trigger: ACATCTCCTCAGAGATCGTCACCTTACCTGAGTACA...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCCAGGGAGCTGGTCACTaGCTGCATGTAGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGQGAGH*LHVDEE
Trigger: CTCTTCATCTACATGCAGTCAGTGACCAGCTCCCTG...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTCCACAACAGCACCACTaGGTGCAAAGAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGPQQHH*VQRGRQ
Trigger: CTGTCGCCCTCTTTGCACTCAGTGGTGCTGTTGTGG...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCACAACAGCACCACTaGGTGCAAAGAGGGCGACAG +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCPQQHH*VQRGRQ
Trigger: CTGTCGCCCTCTTTGCACTCAGTGGTGCTGTTGTGG...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGGGTTGCAGGGCTTCTaGAGGCACCCTACTAACCAC +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGGLQGF*RHPTNH
Trigger: GTGGTTAGTAGGGTGCCTTCAGAAGCCCTGCAACCC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp CTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTAACAAAAGGCTGCTTTaGACTGATCAGGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: LPLCWLGQFLGTELLCSCNKRLL*TDQEDP
Trigger: TGGGTCCTCCTGATCAGTGCAAAGCAGCCTTTTGTT...ACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTCCAAGACTGCGCCATTaGAGTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSPRLRH*SPAWAT
Trigger: TGTTGCCCAGGCTGGACTGCAATGGCGCAGTCTTGG...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTCAGGAGGTAGAGATTaGAGTGAGCCAAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFSGGRD*SEPRLR
Trigger: GCGCAGTCTTGGCTCACTGCAATCTCTACCTCCTGA...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAACAGCACCACTGAGTaGAAAGAGGGCGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGNSTTE*KEGDSE
Trigger: TTCGCTGTCGCCCTCTTTGCACTCAGTGGTGCTGTT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCCTTCCAATGCTGACTaGTTTGGTGCTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSPSNAD*FGAVFE
Trigger: TTCAAAAACAGCACCAAAGCAGTCAGCATTGGAAGG...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTACTCACGCCGATGAGTaGCACTATGACCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCTHADE*HYDQPS
Trigger: GGACGGCTGGTCATAGTGGCACTCATCGGCGTGAGT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGTCACCGTGTTCCTACTaGCCCGACAAGAGGACTGTA +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPSPCSY*PDKRTV
Trigger: TACAGTCCTCTTGTCGGGCCAGTAGGAACACGGTGA...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCCTGAGGAGATGTAGATaGGCACGAACACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCLRRCR*ARTPMP
Trigger: TGGCATGGGTGTTCGTGCCCATCTACATCTCCTCAG...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGCTGAGGAGATGTAGATaGGCACGAACACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPLRRCR*ARTPMP
Trigger: TGGCATGGGTGTTCGTGCCCATCTACATCTCCTCAG...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCTGAGGAGATGTAGATaGGCACGAACACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFLRRCR*ARTPMP
Trigger: TGGCATGGGTGTTCGTGCCCATCTACATCTCCTCAG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTTGTTGGCAATGGTCCTaGAGGGAATGGCCTGGGCGT +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSCWQWS*REWPGR
Trigger: ACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACA...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTCATGGCGTCTGTACGTaGCAGGTGGCAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGHGVCT*QVAGGV
Trigger: AACACCACCTGCCACCTGCCACGTACAGACGCCATG...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCATGGCGTCTGTACGTaGCAGGTGGCAGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCHGVCT*QVAGGV
Trigger: AACACCACCTGCCACCTGCCACGTACAGACGCCATG...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCGTAAGGTTCTCAATCTaGACACTCTGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGVRFSI*TLCGGG
Trigger: CCCACCCCCACAGAGTGTCCAGATTGAGAACCTTAC...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGGTAAGGTTCTCAATCTaGACACTCTGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPVRFSI*TLCGGG
Trigger: CCCACCCCCACAGAGTGTCCAGATTGAGAACCTTAC...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCCAGAAGGCGTGTTTCTaGGGTGTTTGGCCATCACCT +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGQKACF*GVWPSP
Trigger: AGGTGATGGCCAAACACCCCAGAAACACGCCTTCTG...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGTCAAAAGCTACCATaGCTGCTGCAGAGTCGGGTA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGSQKLP*LLQSRV
Trigger: TACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTTGTACTCAGGTAAGGTaGCGATCTCTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCCTQVR*RSLRRC
Trigger: ACATCTCCTCAGAGATCGTCACCTTACCTGAGTACA...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTGTACTCAGGTAAGGTaGCGATCTCTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLCTQVR*RSLRRC
Trigger: ACATCTCCTCAGAGATCGTCACCTTACCTGAGTACA...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTAGTACCAGGTGGCCATaGTGGTCAGGCCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCSTRWP*WSGQRS
Trigger: TGACCTTTGGCCTGACCATCATGGCCACCTGGTACT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGTTTTCCTTCCAATGCTaGCTGCTTTGGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQFSFQC*LLWCCF
Trigger: AAAACAGCACCAAAGCAGTCAGCATTGGAAGGAAAA...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAAATCTCACTGCTCCTaGCCCAGCCTGTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGKSHCS*PSLCIQ
Trigger: TTGAATACACAGGCTGGGTCAGGAGCAGTGAGATTT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGC +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSGSRNM*MASVRG
Trigger: GCCACGTACAGACGCCATGCACATGTTTCGAGACCC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCCTTCCAATGCTGACTaGTTTGGTGCTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCPSNAD*FGAVFE
Trigger: TTCAAAAACAGCACCAAAGCAGTCAGCATTGGAAGG...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp GCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGCCTTCCAATGCTGACTaGTTTGGTGCTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: APALLAWPVLGHRAAVQLPSNAD*FGAVFE
Trigger: TTCAAAAACAGCACCAAAGCAGTCAGCATTGGAAGG...CAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTCGTGTTCTATGTAGATaGAGCATCTGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LGIPMREMGGPEDSELLPRVLCR*SICTAD
Trigger: GTCTGCTGTGCAGATGCTGCATCTACATAGAACACG...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCAACACGACTCTTAGCTaGACGTCACTTTACAGTTTA +
Preference number: 4 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSNTTLS*TSLYSL
Trigger: TAAACTGTAAAGTGACGTGCAGCTAAGAGTCGTGTT...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTATCATCTGGGAACAATaGGCGGCTGATCATGCCCGG +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSIIWEQ*AADHAR
Trigger: CCGGGCATGATCAGCCGCGCATTGTTCCCAGATGAT...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395643.6
ENST00000395645.4
CDS-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGTGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLWSWRE*PGRRLP
Trigger: AGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCA...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTAGGTGGTGTTGGCAATaGTCCTGGAGGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGRWCWQ*SWREWP
Trigger: AGGCCATTCCCTCCAGGACCATTGCCAACACCACCT...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCATAGACATGAGCACCTaGGAACAATGCGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFIDMST*EQCAAD
Trigger: ATCAGCCGCGCATTGTTCCCAGGTGCTCATGTCTAT...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395647.6
CDS-3UTR CCA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTGTTTCTGGGGTGTTTaGCCATCACCTGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVCFWGV*PSPALV
Trigger: AACTAAAGCAGGTGATGGCCAAACACCCCAGAAACA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTTTCTGGGGTGTTTaGCCATCACCTGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: AGLASSWAPSCCAAVRGICFWGV*PSPALV
Trigger: AACTAAAGCAGGTGATGGCCAAACACCCCAGAAACA...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCGAAGAGGCTCCCTCTaGCATTTGGGAGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLRRGSL*HLGAGG
Trigger: CCCACCGGCTCCCAAATGCCAGAGGGAGCCTCTTCG...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCACTCAGTGGACGGCCTTaGACTGAACGTGGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSLSGRP*TERGLL
Trigger: TAGGAGCCCACGTTCAGTCCAAGGCCGTCCACTGAG...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCAGTCAAAAGCTACCATaGCTGCTGCAGAGTCGGGTA +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCSQKLP*LLQSRV
Trigger: TACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACT...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAATTCTCATGGCTTTGTaGCCTGGAGTCAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSILMAL*PGVKSY
Trigger: GTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAAT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTGCAGCCCACATCATCTaGGAACAATGCGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCAAHII*EQCAAD
Trigger: ATCAGCCGCGCATTGTTCCCAGATGATGTGGGCTGC...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395643.6
ENST00000395645.4
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCTGACTGCATGTAGATaGAGAGTTGCCCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCLTACR*RVARCW
Trigger: CCAACAGCGGGCAACTCTTCATCTACATGCAGTCAG...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACACAGGGAGCTGGTCACTaGCTGCATGTAGATGAAGAG +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTQGAGH*LHVDEE
Trigger: CTCTTCATCTACATGCAGTCAGTGACCAGCTCCCTG...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCATTTTCCTTCCAATGCTaGCTGCTTTGGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSFSFQC*LLWCCF
Trigger: AAAACAGCACCAAAGCAGTCAGCATTGGAAGGAAAA...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTAACAGCACCACTGAGTaGAAAGAGGGCGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGNSTTE*KEGDSE
Trigger: TTCGCTGTCGCCCTCTTTGCACTCAGTGGTGCTGTT...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAGACAAGAGGACCATATaGCCACGGCCACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: MREMGGPEDSELLPFCPGDKRTI*PRPHSE
Trigger: CTCTGAATGTGGCCGTGGGCATATGGTCCTCTTGTC...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTGTAAGGTTCTCAATCTaGACACTCTGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGVRFSI*TLCGGG
Trigger: CCCACCCCCACAGAGTGTCCAGATTGAGAACCTTAC...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTGTAAGGTTCTCAATCTaGACACTCTGTGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSVRFSI*TLCGGG
Trigger: CCCACCCCCACAGAGTGTCCAGATTGAGAACCTTAC...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGGGCTTGGCCAGTTCTTaGGCACCGAGCTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLGLASS*APSCCA
Trigger: TGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCC...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCACTGACTGCATGTAGATaGAGAGTTGCCCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSLTACR*RVARCW
Trigger: CCAACAGCGGGCAACTCTTCATCTACATGCAGTCAG...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTTTTCCTTCCAATGCTaGCTGCTTTGGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLFSFQC*LLWCCF
Trigger: AAAACAGCACCAAAGCAGTCAGCATTGGAAGGAAAA...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGATTTTCCTTCCAATGCTaGCTGCTTTGGTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGFSFQC*LLWCCF
Trigger: AAAACAGCACCAAAGCAGTCAGCATTGGAAGGAAAA...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTTGTTTGGCCATCACCTaGTTTAGTTCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCCLAIT*FSSQGH
Trigger: GTGCCCTTGGGAACTAAAGCAGGTGATGGCCAAACA...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR GCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCAGACAAGAGGACCATATaGCCACGGCCACATTCAGAG +
Preference number: 4 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSDKRTI*PRPHSE
Trigger: CTCTGAATGTGGCCGTGGGCATATGGTCCTCTTGTC...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395645.4
CDS-3UTR CCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTCATGGCTTTGTGGCCTaGAGTCAAAAGCTACCATGG +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGHGFVA*SQKLPW
Trigger: CCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATG...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTTGTACTCAGGTAAGGTaGCGATCTCTGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCCTQVR*RSLRRC
Trigger: ACATCTCCTCAGAGATCGTCACCTTACCTGAGTACA...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCTGGTGGCACTACCATTaGTCTGGACTTAAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGWWHYH*SGLKVQ
Trigger: TTGAACTTTAAGTCCAGATCAATGGTAGTGCCACCA...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR TCA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGGTGGCACTACCATTaGTCTGGACTTAAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GIPMREMGGPEDSELLPFWWHYH*SGLKVQ
Trigger: TTGAACTTTAAGTCCAGATCAATGGTAGTGCCACCA...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCCCACTTAGTGATAACTaGCGCCTTTGGATCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCPLSDN*RLWIKS
Trigger: ACTTTTGATCCAAAGGCGGCAGTTATCACTAAGTGG...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTCGTGTTCTATGTAGATaGAGCATCTGCACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSRVLCR*SICTAD
Trigger: GTCTGCTGTGCAGATGCTGCATCTACATAGAACACG...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACAGATAACTGCCGCCTTTaGATCAAAAGTCCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTDNCRL*IKSPWD
Trigger: ATCCCAAGGACTTTTGATCCAAAGGCGGCAGTTATC...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTTGTTTCTGGGGTGTTTaGCCATCACCTGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCCFWGV*PSPALV
Trigger: AACTAAAGCAGGTGATGGCCAAACACCCCAGAAACA...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTTGTTTCTGGGGTGTTTaGCCATCACCTGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSCFWGV*PSPALV
Trigger: AACTAAAGCAGGTGATGGCCAAACACCCCAGAAACA...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR TCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGAGACCCTTAGAACCCTaGGTGCTGGCAAATCTCACT +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLRPLEP*VLANLT
Trigger: AGTGAGATTTGCCAGCACTCAGGGTTCTAAGGGTCT...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGTGTTTGGCCATCACCTaGTTTAGTTCCCAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLCLAIT*FSSQGH
Trigger: GTGCCCTTGGGAACTAAAGCAGGTGATGGCCAAACA...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCTTCCAATGCTGACTaGTTTGGTGCTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPMREMGGPEDSELLPFCPSNAD*FGAVFE
Trigger: TTCAAAAACAGCACCAAAGCAGTCAGCATTGGAAGG...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGATAGACATGAGCACCTaGGAACAATGCGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLIDMST*EQCAAD
Trigger: ATCAGCCGCGCATTGTTCCCAGGTGCTCATGTCTAT...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCAATTCTCATGGCTTTGTaGCCTGGAGTCAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSILMAL*PGVKSY
Trigger: GTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAAT...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR GCA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTTTTAAAACAAAAGGCTaGTTTGCACTGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SWLCGLESKATMAAAESGFKTKG*FALIRR
Trigger: CCTCCTGATCAGTGCAAAGCAGCCTTTTGTTTTAAA...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR GCA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCACCTTCCAATGCTGACTaGTTTGGTGCTGTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSPSNAD*FGAVFE
Trigger: TTCAAAAACAGCACCAAAGCAGTCAGCATTGGAAGG...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
3UTR CAA 72 bp GTCACTTTACAGTTTATAAGGCCCATTCTCATGGCTTaGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLQFIRPILMA*WPGVKSYHGCC
Trigger: GCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATAAACTGTAAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CCA 90 bp TATAAGGCCCATTCTCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGTGTTTCTGGGGTGTTTaGCCATCACCTGCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: YKAHSHGFVAWSQKLPWLCFWGV*PSPALV
Trigger: AACTAAAGCAGGTGATGGCCAAACACCCCAGAAACA...CAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGGCCTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS CCA 90 bp GATGCTCCCCAGGACGGCTGGCCGCGTGTCTGGCTCTCCGCACGGTaGGGCTGGGTTCAGGAATTCCAGGACCAGCCTCGTGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: DAPQDGWPRVWLSAR*GWVQEFQDQPRGPH
Trigger: GTGGGGGCCACGAGGCTGGTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS GCA 90 bp GGGCGCTGCCCTCATCAAAGGCCCAGGCGGGCCTCCATTAACGCCTaGCCACCCCGCCCTCTGCACACAGCTCTCCCGCCCAACACCAGA +
Preference number: 5 (lower is better)
Translates to: GRCPHQRPRRASINA*PPRPLHTALPPNTR
Trigger: TCTGGTGTTGGGCGGGAGAGCTGTGTGCAGAGGGCGGGGTGGGCAGGCGTTAATGGAGGCCCGCCTGGGCCTTTGATGAGGGCAGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp GAGGGCGACAGCGAAGTGCAGGTAGTGGATGCTCCCCAGGACGGCTaGCCGCGTGTCTGGCTCTCCGCACGGTGGGGCTGGGTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: EGDSEVQVVDAPQDG*PRVWLSARWGWVQE
Trigger: TTCCTGAACCCAGCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGCATCCACTACCTGCACTTCGCTGTCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 90 bp CTCACCCCTGTGTCCTGGGTCAGTTGGCATTCCTCACCCCCAAGGTaGGTGGTGGGTGACCCGCTGGAACCCTGGCTGTGGTGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LTPVSWVSWHSSPPR*VVGDPLEPWLWWQG
Trigger: CCCCTGCCACCACAGCCAGGGTTCCAGCGGGTCACCCACCACCCACCTTGGGGGTGAGGAATGCCAACTGACCCAGGACACAGGGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCAAGGCCCCCTGCTCGTaGGCACGTCGCCAGAAGACG +
Preference number: 5 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSKAPCS*ARRQKT
Trigger: CGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCTT...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS GCA 90 bp CCTGCAGGTGCAGCTCCTGACTCTAAGTGCTGTCTGCTCCTTCCCTaGCCTGGGGTCTCTGCGGAGCCAGCCCTTGGAGCTCCGCCATGG +
Preference number: 5 (lower is better)
Translates to: PAGAAPDSKCCLLLP*PGVSAEPALGAPPW
Trigger: CCATGGCGGAGCTCCAAGGGCTGGCTCCGCAGAGACCCCAGGGCAGGGAAGGAGCAGACAGCACTTAGAGTCAGGAGCTGCACCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp GTGATGACGATGATGTCAGCCACGCTCAGCTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTGGCGGCCATGGCTGTCCTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: VMTMMSATLSCVPGV*RSLVELAAMAVLPQ
Trigger: CTGCGGCAGGACAGCCATGGCCGCCAACTCCACCAGCGACCTCCACACTCCCGGGACGCAGCTGAGCGTGGCTGACATCATCGTCATCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 90 bp CGCTCCTCCCTGGCTGAGCACCTCACCCCTGTGTCCTGGGTCAGTTaGCATTCCTCACCCCCAAGGTGGGTGGTGGGTGACCCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: RSSLAEHLTPVSWVS*HSSPPRWVVGDPLE
Trigger: TTCCAGCGGGTCACCCACCACCCACCTTGGGGGTGAGGAATGCCAACTGACCCAGGACACAGGGGTGAGGTGCTCAGCCAGGGAGGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp GGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCAAGAGTTGCCCGCTGTaGGAGTCCTGCAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: GLPLCWLGQFLGTELLCSKSCPL*ESCRTG
Trigger: CCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCTT...GCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGAGGTCGCTGGTGGAGTaGGCGGCCATGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQRSLVE*AAMAVL
Trigger: CAGGACAGCCATGGCCGCCAACTCCACCAGCGACCT...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS TCA 90 bp TGGGTGGTGGGTGACCCGCTGGAACCCTGGCTGTGGTGGCAGGGGTaGCAGAGGCTATGTGTTCAGCTAGGGTGGGTCCTCTCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: WVVGDPLEPWLWWQG*QRLCVQLGWVLSAP
Trigger: AGGCGCTGAGAGGACCCACCCTAGCTGAACACATAGCCTCTGTCACCCCTGCCACCACAGCCAGGGTTCCAGCGGGTCACCCACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 90 bp GCTCCCTGGATCCTGCAGGTGCAGCTCCTGACTCTAAGTGCTGTCTaGTCCTTCCCTGCCCTGGGGTCTCTGCGGAGCCAGCCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: APWILQVQLLTLSAV*SFPALGSLRSQPLE
Trigger: CTCCAAGGGCTGGCTCCGCAGAGACCCCAGGGCAGGGAAGGAGCAGACAGCACTTAGAGTCAGGAGCTGCACCTGCAGGATCCAGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp GCATCCATCCGCTCCTCCCTGGCTGAGCACCTCACCCCTGTGTCCTaGGTCAGTTGGCATTCCTCACCCCCAAGGTGGGTGGTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ASIRSSLAEHLTPVS*VSWHSSPPRWVVGD
Trigger: GTCACCCACCACCCACCTTGGGGGTGAGGAATGCCAACTGACCCAGGACACAGGGGTGAGGTGCTCAGCCAGGGAGGAGCGGATGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp CCCTGCCCTGGGGTCTCTGCGGAGCCAGCCCTTGGAGCTCCGCCATaGAGCTCCCTCTTGTCTCTCCTTCAAAGCACCTGTCCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: PCPGVSAEPALGAPP*SSLLSLLQSTCPSH
Trigger: GTGACTGGGACAGGTGCTTTGAAGGAGAGACAAGAGGGAGCTCCATGGCGGAGCTCCAAGGGCTGGCTCCGCAGAGACCCCAGGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCGCCTGCCGTCTCCCCTaGCCTCTGGCCAGCGAGCCT +
Preference number: 5 (lower is better)
Translates to: GIPMREMGGPEDSELLPFACRLP*PLASEP
Trigger: AGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGC...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAAGGATGGAGCCCGCCTaGGCATGGTTCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSRMEPA*AWFRSR
Trigger: CCGGGACCTGAACCATGCCAAGGCGGGCTCCATCCT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGGAGGGGCTGGGGGTGTaGAGGGTATCCCAGTGCGTC +
Preference number: 5 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVEGLGV*RVSQCV
Trigger: GACGCACTGGGATACCCTCAACACCCCCAGCCCCTC...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAAGGCCCCCTGCTCGTaGGCACGTCGCCAGAAGACG +
Preference number: 5 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVKAPCS*ARRQKT
Trigger: CGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCTT...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGAAGGCCCCCTGCTCGTaGGCACGTCGCCAGAAGACG +
Preference number: 5 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRKAPCS*ARRQKT
Trigger: CGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCTT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGTGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAAGGTCGCTGGTGGAGTaGGCGGCCATGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSRSLVE*AAMAVL
Trigger: CAGGACAGCCATGGCCGCCAACTCCACCAGCGACCT...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS TCA 90 bp CGCTCCAATGGTGGTGTTTCGGGCAGGAGGAAGCTGAGACGGCTTTaGGGGGCTGGGGGTGTTGAGGGTATCCCAGTGCGTCCCACCAGC +
Preference number: 5 (lower is better)
Translates to: RSNGGVSGRRKLRRL*GAGGVEGIPVRPTS
Trigger: GCTGGTGGGACGCACTGGGATACCCTCAACACCCCCAGCCCCTCAAAGCCGTCTCAGCTTCCTCCTGCCCGAAACACCACCATTGGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS CCA 90 bp TACGTGGCAGGTGGCAGGTGGTGTTGGCAATGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCTCCAGCTGCCCGTAACCACCGATCT +
Preference number: 5 (lower is better)
Translates to: YVAGGRWCWQWSWRE*PGRRLPPAARNHRS
Trigger: AGATCGGTGGTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACACCACCTGCCACCTGCCACGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 90 bp GGCCACTCCAGCCAGGCCCTCGCTTTCTTACCCAGCCTTCTTACCTaGCTGCCAGAGGACCCCCAAACCCAGAGGCTGCTCCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: GHSSQALAFLPSLLT*LPEDPQTQRLLLLP
Trigger: AGGCAGAAGGAGCAGCCTCTGGGTTTGGGGGTCCTCTGGCAGCCAGGTAAGAAGGCTGGGTAAGAAAGCGAGGGCCTGGCTGGAGTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp CACACTCACGCCGATGAGTGCCACTATGACCAGCCTGCAGGCGAGTaGAAGGCAGGCAGCGGTCGTCGTGGGAGGCTCTTCAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HTHADECHYDQPAGE*KAGSGRRGRLFSSL
Trigger: GAGAGAGCTGAAGAGCCTCCCACGACGACCGCTGCCTGCCTTCCACTCGCCTGCAGGCTGGTCATAGTGGCACTCATCGGCGTGAGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAGGATGGAGCCCGCCTaGGCATGGTTCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLRMEPA*AWFRSR
Trigger: CCGGGACCTGAACCATGCCAAGGCGGGCTCCATCCT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCAAGAGTTGCCCGCTGTaGGAGTCCTGCAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: LASSWAPSCCAAVRGICPKSCPL*ESCRTG
Trigger: CCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCTT...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTAAGGCCCCCTGCTCGTaGGCACGTCGCCAGAAGACG +
Preference number: 5 (lower is better)
Translates to: LGIPMREMGGPEDSELLPKAPCS*ARRQKT
Trigger: CGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCTT...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAAGGCCCCCTGCTCGTaGGCACGTCGCCAGAAGACG +
Preference number: 5 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGKAPCS*ARRQKT
Trigger: CGTCTTCTGGCGACGTGCCAACGAGCAGGGGGCCTT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CCCTCTTGGGGCCTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCATCCCGCTTTGCTGGCTaGGCCAGTTCTTGGGCACCG +
Preference number: 5 (lower is better)
Translates to: PSWGLGIPMREMGGPEDSSRFAG*ASSWAP
Trigger: CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA...TGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAGGCCCCAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTCCCGCTTTGCTGGCTaGGCCAGTTCTTGGGCACCG +
Preference number: 5 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVSRFAG*ASSWAP
Trigger: CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCAAGACTGCGCCATaGCAGTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCAKTAP*QSSLGN
Trigger: GTTGCCCAGGCTGGACTGCAATGGCGCAGTCTTGGC...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGGATGGAGCCCGCCTaGGCATGGTTCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGRMEPA*AWFRSR
Trigger: CCGGGACCTGAACCATGCCAAGGCGGGCTCCATCCT...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAAGAGTTGCCCGCTGTaGGAGTCCTGCAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLKSCPL*ESCRTG
Trigger: CCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCTT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CTCGGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTCCCGCTTTGCTGGCTaGGCCAGTTCTTGGGCACCG +
Preference number: 5 (lower is better)
Translates to: LGIPMREMGGPEDSELLPSRFAG*ASSWAP
Trigger: CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA...AGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGAACCACCTCCTCTTCTaGCAGTCACCTGGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RFAGLASSWAPSCCAAVRNHLLF*QSPGAC
Trigger: GCAGGCCCCAGGTGACTGCAAGAAGAGGAGGTGGTT...CCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGGTCGCTGGTGGAGTaGGCGGCCATGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPRSLVE*AAMAVL
Trigger: CAGGACAGCCATGGCCGCCAACTCCACCAGCGACCT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS GCA 90 bp GCTGAGAGAACCCTCAGGCAGGCTCAACTGCCTGCCGTCTCCCCTTaGCTCTGGCCAGCGAGCCTCAGATGGTGTTTACTTCCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: AERTLRQAQLPAVSP*LWPASLRWCLLPKP
Trigger: TGGCTTGGGAAGTAAACACCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGAGGGTTCTCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS CCA 90 bp GAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTGTTaGCAATGGTCCTGGAGGGAATGGCCTGGGCGTAGGCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ETCAWRLYVAGGRWC*QWSWREWPGRRLPP
Trigger: TGGAGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 90 bp GGTCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTaGTGTTGGCAATGGTCCTGGAGGGAATGGCCTGGGCGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: GLETCAWRLYVAGGR*CWQWSWREWPGRRL
Trigger: CAGCCTACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCGTTGTACCAGCAGCATaGGCTCTGAGACCGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCVVPAA*ALRPLA
Trigger: AGCCAACGGTCTCAGAGCCAATGCTGCTGGTACAAC...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTAGGTGGCAGGTGGTGTaGGCAATGGTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCRWQVV*AMVLEG
Trigger: TCCCTCCAGGACCATTGCCAACACCACCTGCCACCT...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGAGGTGGCAGGTGGTGTaGGCAATGGTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLRWQVV*AMVLEG
Trigger: TCCCTCCAGGACCATTGCCAACACCACCTGCCACCT...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGTTCAGGGCTCCCGCTTaGCTGGCTTGGCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVFRAPA*LAWPVL
Trigger: AAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGTTCAGGGCTCCCGCTTaGCTGGCTTGGCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVFRAPA*LAWPVL
Trigger: AAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS TCA 90 bp CTAGGAGATACCGCTCCAATGGTGGTGTTTCGGGCAGGAGGAAGCTaGGACGGCTTTGAGGGGCTGGGGGTGTTGAGGGTATCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LGDTAPMVVFRAGGS*DGFEGLGVLRVSQC
Trigger: GCACTGGGATACCCTCAACACCCCCAGCCCCTCAAAGCCGTCTCAGCTTCCTCCTGCCCGAAACACCACCATTGGAGCGGTATCTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS GCA 90 bp GGAAAAAGGAAGTCACTGCTGAGAGAACCCTCAGGCAGGCTCAACTaGCTGCCGTCTCCCCTTGCCTCTGGCCAGCGAGCCTCAGATGGT +
Preference number: 5 (lower is better)
Translates to: GKRKSLLREPSGRLN*LPSPLASGQRASDG
Trigger: ACCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGAGGGTTCTCTCAGCAGTGACTTCCTTTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGGTGGCAGGTGGTGTaGGCAATGGTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPRWQVV*AMVLEG
Trigger: TCCCTCCAGGACCATTGCCAACACCACCTGCCACCT...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAAGGATGGAGCCCGCCTaGGCATGGTTCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: MREMGGPEDSELLPFCPGRMEPA*AWFRSR
Trigger: CCGGGACCTGAACCATGCCAAGGCGGGCTCCATCCT...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCTCGAGAGACGGACACTaGGTGTCTCTCCTCATAGAC +
Preference number: 5 (lower is better)
Translates to: SGLPLCWLGQFLGTELLCSRDGH*VSLLID
Trigger: GTCTATGAGGAGAGACACCAAGTGTCCGTCTCTCGA...GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395647.6
CDS-3UTR CAA 90 bp ATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCAACCACCTCCTCTTCTaGCAGTCACCTGGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: IFQGSRFAGLASSWAPSCNHLLF*QSPGAC
Trigger: GCAGGCCCCAGGTGACTGCAAGAAGAGGAGGTGGTT...GCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp AGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCCCATTCTCATGGCTTaGTGGCCTGGAGTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: RAPALLAWPVLGHRAAVQPILMA*WPGVKS
Trigger: GCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGG...CTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS TCA 90 bp GGGCTGCAGCCACAGTTACTGTGGAACATCTCAAGGAGGGGTGTCTaGGATCTCTCCGAGTCCTGCACAGGGTTTCCAGGAGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GLQPQLLWNISRRGV*DLSESCTGFPGGCG
Trigger: CCCACAGCCTCCTGGAAACCCTGTGCAGGACTCGGAGAGATCTCAGACACCCCTCCTTGAGATGTTCCACAGTAACTGTGGCTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 90 bp CCCCACCCCGACAGCCCTGTGCTGCACATCCTTCACAGGGCAACCTaGTTACTAAGGATGCAAAGTTTGGAGCCAGAGGTGTGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: PHPDSPVLHILHRAT*LLRMQSLEPEVWVG
Trigger: CCCAACCCACACCTCTGGCTCCAAACTTTGCATCCTTAGTAAGCAGGTTGCCCTGTGAAGGATGTGCAGCACAGGGCTGTCGGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 90 bp AGAACCCTCAGGCAGGCTCAACTGCCTGCCGTCTCCCCTTGCCTCTaGCCAGCGAGCCTCAGATGGTGTTTACTTCCCAAGCCATTGCTT +
Preference number: 5 (lower is better)
Translates to: RTLRQAQLPAVSPCL*PASLRWCLLPKPLL
Trigger: AAGCAATGGCTTGGGAAGTAAACACCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGAGGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACAAAGAGTTGCCCGCTGTaGGAGTCCTGCAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTKSCPL*ESCRTG
Trigger: CCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCTT...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTAAGAGTTGCCCGCTGTaGGAGTCCTGCAGGACGGGG +
Preference number: 5 (lower is better)
Translates to: IPMREMGGPEDSELLPFCKSCPL*ESCRTG
Trigger: CCCCGTCCTGCAGGACTCCAACAGCGGGCAACTCTT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp GCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCCATGTAGATGAAGAGTaGCCCGCTGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: AGLASSWAPSCCAAVRGIHVDEE*PAVGVL
Trigger: CAGGACTCCAACAGCGGGCAACTCTTCATCTACATG...GATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGCATGTAGATGAAGAGTaGCCCGCTGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SRFAGLASSWAPSCCAAVHVDEE*PAVGVL
Trigger: CAGGACTCCAACAGCGGGCAACTCTTCATCTACATG...CACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTTGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: IPMREMGGPEDSELLPFCWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTTCAGGGCTCCCGCTTaGCTGGCTTGGCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GIPMREMGGPEDSELLPFFRAPA*LAWPVL
Trigger: AAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCAAGGTCGCTGGTGGAGTaGGCGGCCATGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSRSLVE*AAMAVL
Trigger: CAGGACAGCCATGGCCGCCAACTCCACCAGCGACCT...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395645.4
CDS TCA 90 bp GACCTGGTGCCTGCCCAGCACTCAGAGTCCAGCAAAGAAAACAGATaGGCCTCTTACCTACACTCGGACTGGGCTGGAGCAGCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: DLVPAQHSESSKENR*ASYLHSDWAGAAQR
Trigger: CCTCTGAGCTGCTCCAGCCCAGTCCGAGTGTAGGTAAGAGGCTCATCTGTTTTCTTTGCTGGACTCTGAGTGCTGGGCAGGCACCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 90 bp ATGCCACCATCAGGGTGGATAGTGCCCTCCAGCATCTCCCTGGGCTaGAGCCACAGTTACTGTGGAACATCTCAAGGAGGGGTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: MPPSGWIVPSSISLG*SHSYCGTSQGGVSE
Trigger: CTCAGACACCCCTCCTTGAGATGTTCCACAGTAACTGTGGCTGCAGCCCAGGGAGATGCTGGAGGGCACTATCCACCCTGATGGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 90 bp GGACACTACCCTAGGATCCCCAACTCGGCGATGAGTGGGACCTGGTaGCTGCCCAGCACTCAGAGTCCAGCAAAGAAAACAGATGAGCCT +
Preference number: 5 (lower is better)
Translates to: GHYPRIPNSAMSGTW*LPSTQSPAKKTDEP
Trigger: AGGCTCATCTGTTTTCTTTGCTGGACTCTGAGTGCTGGGCAGGCACCAGGTCCCACTCATCGCCGAGTTGGGGATCCTAGGGTAGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp TTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGCCCCAGGTCCAGCGATATCTaGGTGAAGACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: LASSWAPSCCAAVRGICPRSSDI*VKTDSS
Trigger: GCTACTGTCTGTCTTCACCAAGATATCGCTGGACCT...GGGGCAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGAGGTCCAGCGATATCTaGGTGAAGACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVRSSDI*VKTDSS
Trigger: GCTACTGTCTGTCTTCACCAAGATATCGCTGGACCT...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACAAGGTGGCAGGTGGTGTaGGCAATGGTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTRWQVV*AMVLEG
Trigger: TCCCTCCAGGACCATTGCCAACACCACCTGCCACCT...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAAGGTGGCAGGTGGTGTaGGCAATGGTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: MREMGGPEDSELLPFCPGRWQVV*AMVLEG
Trigger: TCCCTCCAGGACCATTGCCAACACCACCTGCCACCT...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAATCTGTCGAGAGACGGACACTaGGTGTCTCTCCTCATAGAC +
Preference number: 5 (lower is better)
Translates to: WLGQFLGTELLCSCEGNLSRDGH*VSLLID
Trigger: GTCTATGAGGAGAGACACCAAGTGTCCGTCTCTCGA...CAGATTCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395647.6
CDS-3UTR CAA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCATGGCTTGGCCAGTTCTaGGGCACCGAGCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSWLGQF*GTELLC
Trigger: GCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCA...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS CCA 90 bp GTAGGACACTACCCTAGGATCCCCAACTCGGCGATGAGTGGGACCTaGTGCCTGCCCAGCACTCAGAGTCCAGCAAAGAAAACAGATGAG +
Preference number: 5 (lower is better)
Translates to: VGHYPRIPNSAMSGT*CLPSTQSPAKKTDE
Trigger: CTCATCTGTTTTCTTTGCTGGACTCTGAGTGCTGGGCAGGCACCAGGTCCCACTCATCGCCGAGTTGGGGATCCTAGGGTAGTGTCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp TTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCAGCTGTGAGGGGAAGGTCCAGCGATATCTaGGTGAAGACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: FAGLASSWAPSCCAAVRGRSSDI*VKTDSS
Trigger: GCTACTGTCTGTCTTCACCAAGATATCGCTGGACCT...TCCCCTCACAGCTGCACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTAGGTCCAGCGATATCTaGGTGAAGACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: FQGSRFAGLASSWAPSCCRSSDI*VKTDSS
Trigger: GCTACTGTCTGTCTTCACCAAGATATCGCTGGACCT...ACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp CCCCTAATTTTTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGCATGTAGATGAAGAGTaGCCCGCTGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PLIFQGSRFAGLASSWAPHVDEE*PAVGVL
Trigger: CAGGACTCCAACAGCGGGCAACTCTTCATCTACATG...CGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCCATGTAGATGAAGAGTaGCCCGCTGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGHVDEE*PAVGVL
Trigger: CAGGACTCCAACAGCGGGCAACTCTTCATCTACATG...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTTTCAGGGCTCCCGCTTaGCTGGCTTGGCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSFRAPA*LAWPVL
Trigger: AAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCCCATTCTCATGGCTTaGTGGCCTGGAGTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: GIPMREMGGPEDSELLPFPILMA*WPGVKS
Trigger: GCTTTTGACTCCAGGCCACAAAGCCATGAGAATGGG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS TCA 90 bp TGGGGTGTTTGGCCATCACCTGCTTTAGTTCCCAAGGGCACATCCTaGGCCAGGGTCCACCAGGTAAGGTTCTCAATCTGGACACTCTGT +
Preference number: 5 (lower is better)
Translates to: WGVWPSPALVPKGTS*ARVHQVRFSIWTLC
Trigger: ACAGAGTGTCCAGATTGAGAACCTTACCTGGTGGACCCTGGCTCAGGATGTGCCCTTGGGAACTAAAGCAGGTGATGGCCAAACACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTCATGTAGATGAAGAGTaGCCCGCTGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SWLCGLESKATMAAAESGHVDEE*PAVGVL
Trigger: CAGGACTCCAACAGCGGGCAACTCTTCATCTACATG...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp TTCAGGGCTCCCGCTTTGCTGGCTTGGCCAGTTCTTGGGCACCGAGCTGCTGTGCCAATGCTGACTGCTTaGGTGCTGTTTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: FRAPALLAWPVLGHRAAVPMLTA*VLFLKC
Trigger: ACATTTCAAAAACAGCACCAAAGCAGTCAGCATTGG...CACAGCAGCTCGGTGCCCAAGAACTGGCCAAGCCAGCAAAGCGGGAGCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS GCA 90 bp TCCCAGTCACTACATGCACATTTACCTGGGTGTCTACTTGTTTACTaGCTGTCTTCCCCTCCCAATGGAAGCACCAGGAGAGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SQSLHAHLPGCLLVY*LSSPPNGSTRRAGA
Trigger: GGCTCCTGCTCTCCTGGTGCTTCCATTGGGAGGGGAAGACAGGCAGTAAACAAGTAGACACCCAGGTAAATGTGCATGTAGTGACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp GGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCCCAATGCTGACTGCTTaGGTGCTGTTTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: GKWVDLRTQSSCLSVQDGPMLTA*VLFLKC
Trigger: ACATTTCAAAAACAGCACCAAAGCAGTCAGCATTGG...GCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp GGGATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCCCAATGCTGACTGCTTaGGTGCTGTTTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: GIPMREMGGPEDSELLPFPMLTA*VLFLKC
Trigger: ACATTTCAAAAACAGCACCAAAGCAGTCAGCATTGG...GAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ACCATTGATCTGGACTTAAAGTTCAACTCCGGTGCTGCCCGAGACCCCTCCTCAAGGCAGGAGAATTGCTaGAACTCAGGAGGTAGAGAT +
Preference number: 5 (lower is better)
Translates to: TIDLDLKFNSGAARDPSSRQENC*NSGGRD
Trigger: ATCTCTACCTCCTGAGTTCAAGCAATTCTCCTGCCT...TGAGGAGGGGTCTCGGGCAGCACCGGAGTTGAACTTTAAGTCCAGATCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS-3UTR CAA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTATCTGGTCAAAAGCTTaGATTGTCAGGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSIWSKA*IVRMTA
Trigger: GGCTGTCATCCTGACAATCAAAGCTTTTGACCAGAT...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ATCCCCATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTATCTGGTCAAAAGCTTaGATTGTCAGGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: IPMREMGGPEDSELLPFCIWSKA*IVRMTA
Trigger: GGCTGTCATCCTGACAATCAAAGCTTTTGACCAGAT...ACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCATGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp ATGAGGGAAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGAATCTGGTCAAAAGCTTaGATTGTCAGGATGACAGCC +
Preference number: 5 (lower is better)
Translates to: MREMGGPEDSELLPFCPGIWSKA*IVRMTA
Trigger: GGCTGTCATCCTGACAATCAAAGCTTTTGACCAGAT...TCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTTCCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 90 bp CTCTCCTTCAAAGCACCTGTCCCAGTCACTACATGCACATTTACCTaGGTGTCTACTTGTTTACTGCCTGTCTTCCCCTCCCAATGGAAG +
Preference number: 5 (lower is better)
Translates to: LSFKAPVPVTTCTFT*VSTCLLPVFPSQWK
Trigger: CTTCCATTGGGAGGGGAAGACAGGCAGTAAACAAGTAGACACCCAGGTAAATGTGCATGTAGTGACTGGGACAGGTGCTTTGAAGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS-3UTR CAA 90 bp AAATGGGTGGACCTGAGGACTCAGAGCTCCTGCCTTTCTGTCCAGGATGGCAGTCCAATGCTGACTGCTTaGGTGCTGTTTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: KWVDLRTQSSCLSVQDGSPMLTA*VLFLKC
Trigger: ACATTTCAAAAACAGCACCAAAGCAGTCAGCATTGG...ACTGCCATCCTGGACAGAAAGGCAGGAGCTCTGAGTCCTCAGGTCCACCCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS-3UTR CAA 90 bp TGGGCGGCTGGGAAAGCCGTGTTCTATGTAGATGCAGCATCTGCACAGCAGACACCAATGCTGACTGCTTaGGTGCTGTTTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: WAAGKAVFYVDAASAQQTPMLTA*VLFLKC
Trigger: ACATTTCAAAAACAGCACCAAAGCAGTCAGCATTGG...TGTCTGCTGTGCAGATGCTGCATCTACATAGAACACGGCTTTCCCAGCCGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395645.4
CDS-3UTR CAA 90 bp TCATGGCTTTGTGGCCTGGAGTCAAAAGCTACCATGGCTGCTGCAGAGTCGGGTTTACTTCCCAAGCCATaGCTTGCAATGTGTTTTAAA +
Preference number: 5 (lower is better)
Translates to: SWLCGLESKATMAAAESGLLPKP*LAMCFK
Trigger: TTTAAAACACATTGCAAGCAATGGCTTGGGAAGTAA...ACCCGACTCTGCAGCAGCCATGGTAGCTTTTGACTCCAGGCCACAAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS CCA 72 bp GGCTGGCCGCGTGTCTGGCTCTCCGCACGGTGGGGCTaGGTTCAGGAATTCCAGGACCAGCCTCGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: GWPRVWLSARWG*VQEFQDQPRGP
Trigger: GGGGCCACGAGGCTGGTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS TCA 72 bp CTCGAAGCCTGCCACGGCCAGACCTCCTGCCGCGCCTaGGCCCGCCAGTCCAATGAAGAGGCCAGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: LEACHGQTSCRA*ARQSNEEARAL
Trigger: GAGGGCTCTGGCCTCTTCATTGGACTGGCGGGCTCAGGCGCGGCAGGAGGTCTGGCCGTGGCAGGCTTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS GCA 72 bp CCTCATCAAAGGCCCAGGCGGGCCTCCATTAACGCCTaGCCACCCCGCCCTCTGCACACAGCTCTCCCGCCC +
Preference number: 6 (lower is better)
Translates to: PHQRPRRASINA*PPRPLHTALPP
Trigger: GGGCGGGAGAGCTGTGTGCAGAGGGCGGGGTGGGCAGGCGTTAATGGAGGCCCGCCTGGGCCTTTGATGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 72 bp GGCGGGCCTCCATTAACGCCTGCCCACCCCGCCCTCTaGACACAGCTCTCCCGCCCAACACCAGACTCTGCA +
Preference number: 6 (lower is better)
Translates to: GGPPLTPAHPAL*TQLSRPTPDSA
Trigger: TGCAGAGTCTGGTGTTGGGCGGGAGAGCTGTGTGCAGAGGGCGGGGTGGGCAGGCGTTAATGGAGGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp CAGGACGGCTGGCCGCGTGTCTGGCTCTCCGCACGGTaGGGCTGGGTTCAGGAATTCCAGGACCAGCCTCGT +
Preference number: 6 (lower is better)
Translates to: QDGWPRVWLSAR*GWVQEFQDQPR
Trigger: ACGAGGCTGGTCCTGGAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCCGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp GCCTGCAGGCGAGTGGAAGGCAGGCAGCGGTCGTCGTaGGAGGCTCTTCAGCTCTCTCCCACCTCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: ACRRVEGRQRSS*EALQLSPTSPG
Trigger: ACCAGGGGAGGTGGGAGAGAGCTGAAGAGCCTCCCACGACGACCGCTGCCTGCCTTCCACTCGCCTGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 72 bp AGCTGCGTCCCGGGAGTGTGGAGGTCGCTGGTGGAGTaGGCGGCCATGGCTGTCCTGCCGCAGGCACTAGGT +
Preference number: 6 (lower is better)
Translates to: SCVPGVWRSLVE*AAMAVLPQALG
Trigger: ACCTAGTGCCTGCGGCAGGACAGCCATGGCCGCCAACTCCACCAGCGACCTCCACACTCCCGGGACGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp GTAGTGGATGCTCCCCAGGACGGCTGGCCGCGTGTCTaGCTCTCCGCACGGTGGGGCTGGGTTCAGGAATTC +
Preference number: 6 (lower is better)
Translates to: VVDAPQDGWPRV*LSARWGWVQEF
Trigger: GAATTCCTGAACCCAGCCCCACCGTGCGGAGAGCCAGACACGCGGCCAGCCGTCCTGGGGAGCATCCACTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp CACTGGCCGGCATTTGTGGGAGCTGGGACCTCTGGCTaGCACATCCCCACCCCGACAGCCCTGTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: HWPAFVGAGTSG*HIPTPTALCCT
Trigger: TGTGCAGCACAGGGCTGTCGGGGTGGGGATGTGCCAGCCAGAGGTCCCAGCTCCCACAAATGCCGGCCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 72 bp CAGGACGGGGATCCAGGCCACACTCACGCCGATGAGTaGCACTATGACCAGCCGTCCCACCAGCAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: QDGDPGHTHADE*HYDQPSHQQEL
Trigger: GAGCTCCTGCTGGTGGGACGGCTGGTCATAGTGGCACTCATCGGCGTGAGTGTGGCCTGGATCCCCGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp GGTGGCAGGTGGTGTTGGCAATGGTCCTGGAGGGAATaGCCTGGGCGTAGGCTGCCTCCAGCTGCCCGTAAC +
Preference number: 6 (lower is better)
Translates to: GGRWCWQWSWRE*PGRRLPPAARN
Trigger: GTTACGGGCAGCTGGAGGCAGCCTACGCCCAGGCCATTCCCTCCAGGACCATTGCCAACACCACCTGCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp ATGATGTCAGCCACGCTCAGCTGCGTCCCGGGAGTGTaGAGGTCGCTGGTGGAGTTGGCGGCCATGGCTGTC +
Preference number: 6 (lower is better)
Translates to: MMSATLSCVPGV*RSLVELAAMAV
Trigger: GACAGCCATGGCCGCCAACTCCACCAGCGACCTCCACACTCCCGGGACGCAGCTGAGCGTGGCTGACATCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp GTGTCCTGGGTCAGTTGGCATTCCTCACCCCCAAGGTaGGTGGTGGGTGACCCGCTGGAACCCTGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: VSWVSWHSSPPR*VVGDPLEPWLW
Trigger: CCACAGCCAGGGTTCCAGCGGGTCACCCACCACCCACCTTGGGGGTGAGGAATGCCAACTGACCCAGGACAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp GCCGATGAGTGCCACTATGACCAGCCTGCAGGCGAGTaGAAGGCAGGCAGCGGTCGTCGTGGGAGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: ADECHYDQPAGE*KAGSGRRGRLF
Trigger: GAAGAGCCTCCCACGACGACCGCTGCCTGCCTTCCACTCGCCTGCAGGCTGGTCATAGTGGCACTCATCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS GCA 72 bp AAGTCACTGCTGAGAGAACCCTCAGGCAGGCTCAACTaGCTGCCGTCTCCCCTTGCCTCTGGCCAGCGAGCC +
Preference number: 6 (lower is better)
Translates to: KSLLREPSGRLN*LPSPLASGQRA
Trigger: GGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGAGGGTTCTCTCAGCAGTGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS GCA 72 bp CACGGCAGGTCCCCTGTGTGGGGGTCTCGAAACATGTaGATGGCGTCTGTACGTGGCAGGTGGCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: HGRSPVWGSRNM*MASVRGRWQVV
Trigger: CACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGACCCCCACACAGGGGACCTGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CCA 72 bp CCTGGAATGCCACTCCCTCCCATGCCACCATCAGGGTaGATAGTGCCCTCCAGCATCTCCCTGGGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PGMPLPPMPPSG*IVPSSISLGCS
Trigger: GCTGCAGCCCAGGGAGATGCTGGAGGGCACTATCCACCCTGATGGTGGCATGGGAGGGAGTGGCATTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp CTGGCTGAGCACCTCACCCCTGTGTCCTGGGTCAGTTaGCATTCCTCACCCCCAAGGTGGGTGGTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: LAEHLTPVSWVS*HSSPPRWVVGD
Trigger: GTCACCCACCACCCACCTTGGGGGTGAGGAATGCCAACTGACCCAGGACACAGGGGTGAGGTGCTCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS TCA 72 bp GGTGGTGTTTCGGGCAGGAGGAAGCTGAGACGGCTTTaGGGGGCTGGGGGTGTTGAGGGTATCCCAGTGCGT +
Preference number: 6 (lower is better)
Translates to: GGVSGRRKLRRL*GAGGVEGIPVR
Trigger: ACGCACTGGGATACCCTCAACACCCCCAGCCCCTCAAAGCCGTCTCAGCTTCCTCCTGCCCGAAACACCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS GCA 72 bp TGGTCCACACCACCAGTGACCTGGCCAGTCCTGCCCTaGTCCAAACCCTTTGGTGGCTCCCTGGATCCTGCA +
Preference number: 6 (lower is better)
Translates to: WSTPPVTWPVLP*SKPFGGSLDPA
Trigger: TGCAGGATCCAGGGAGCCACCAAAGGGTTTGGAGCAGGGCAGGACTGGCCAGGTCACTGGTGGTGTGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp AGCCAGGCCCTCGCTTTCTTACCCAGCCTTCTTACCTaGCTGCCAGAGGACCCCCAAACCCAGAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SQALAFLPSLLT*LPEDPQTQRLL
Trigger: GAGCAGCCTCTGGGTTTGGGGGTCCTCTGGCAGCCAGGTAAGAAGGCTGGGTAAGAAAGCGAGGGCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp GGGGTCTCTGCGGAGCCAGCCCTTGGAGCTCCGCCATaGAGCTCCCTCTTGTCTCTCCTTCAAAGCACCTGT +
Preference number: 6 (lower is better)
Translates to: GVSAEPALGAPP*SSLLSLLQSTC
Trigger: ACAGGTGCTTTGAAGGAGAGACAAGAGGGAGCTCCATGGCGGAGCTCCAAGGGCTGGCTCCGCAGAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS TCA 72 bp ACCGCTCCAATGGTGGTGTTTCGGGCAGGAGGAAGCTaGGACGGCTTTGAGGGGCTGGGGGTGTTGAGGGTA +
Preference number: 6 (lower is better)
Translates to: TAPMVVFRAGGS*DGFEGLGVLRV
Trigger: TACCCTCAACACCCCCAGCCCCTCAAAGCCGTCTCAGCTTCCTCCTGCCCGAAACACCACCATTGGAGCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS GCA 72 bp ACCCTCAGGCAGGCTCAACTGCCTGCCGTCTCCCCTTaGCTCTGGCCAGCGAGCCTCAGATGGTGTTTACTT +
Preference number: 6 (lower is better)
Translates to: TLRQAQLPAVSP*LWPASLRWCLL
Trigger: AAGTAAACACCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGCAGGCAGTTGAGCCTGCCTGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS GCA 72 bp CAGGACGGGGATCCAGGCCACACTCACGCCGATGAGTaGCACTATGACCAGCCAGAGATCCATGACCACGAG +
Preference number: 6 (lower is better)
Translates to: QDGDPGHTHADE*HYDQPEIHDHE
Trigger: CTCGTGGTCATGGATCTCTGGCTGGTCATAGTGGCACTCATCGGCGTGAGTGTGGCCTGGATCCCCGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS CCA 72 bp ACATGTGCATGGCGTCTGTACGTGGCAGGTGGCAGGTaGTGTTGGCAATGGTCCTGGAGGGAATGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: TCAWRLYVAGGR*CWQWSWREWPG
Trigger: CCCAGGCCATTCCCTCCAGGACCATTGCCAACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CAA 90 bp GGACGGCACCACGCAGCCCACATCATCTGTTCGAGAGACGGACACTaGGTGTCTCTCCTCATAGACATGAGCACCTGGGAACAATGCGCG +
Preference number: 6 (lower is better)
Translates to: GRHHAAHIICSRDGH*VSLLIDMSTWEQCA
Trigger: CGCGCATTGTTCCCAGGTGCTCATGTCTATGAGGAGAGACACCAAGTGTCCGTCTCTCGAACAGATGATGTGGGCTGCGTGGTGCCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395647.6
CDS GCA 72 bp CCTAGGATCCCCAACTCGGCGATGAGTGGGACCTGGTaGCTGCCCAGCACTCAGAGTCCAGCAAAGAAAACA +
Preference number: 6 (lower is better)
Translates to: PRIPNSAMSGTW*LPSTQSPAKKT
Trigger: TGTTTTCTTTGCTGGACTCTGAGTGCTGGGCAGGCACCAGGTCCCACTCATCGCCGAGTTGGGGATCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp TACCCTAGGATCCCCAACTCGGCGATGAGTGGGACCTaGTGCCTGCCCAGCACTCAGAGTCCAGCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: YPRIPNSAMSGT*CLPSTQSPAKK
Trigger: TTTCTTTGCTGGACTCTGAGTGCTGGGCAGGCACCAGGTCCCACTCATCGCCGAGTTGGGGATCCTAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp GCCGTCTCCCCTTGCCTCTGGCCAGCGAGCCTCAGATaGTGTTTACTTCCCAAGCCATTGCTTGCAATGTGT +
Preference number: 6 (lower is better)
Translates to: AVSPCLWPASLR*CLLPKPLLAMC
Trigger: ACACATTGCAAGCAATGGCTTGGGAAGTAAACACCATCTGAGGCTCGCTGGCCAGAGGCAAGGGGAGACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317977.10
CDS CCA 72 bp TCTCGAAACATGTGCATGGCGTCTGTACGTGGCAGGTaGCAGGTGGTGTTGGCAATGGTCCTGGAGGGAATG +
Preference number: 6 (lower is better)
Translates to: SRNMCMASVRGR*QVVLAMVLEGM
Trigger: CATTCCCTCCAGGACCATTGCCAACACCACCTGCCACCTGCCACGTACAGACGCCATGCACATGTTTCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS TCA 72 bp CCTGCCCAGCACTCAGAGTCCAGCAAAGAAAACAGATaGGCCTCTTACCTACACTCGGACTGGGCTGGAGCA +
Preference number: 6 (lower is better)
Translates to: PAQHSESSKENR*ASYLHSDWAGA
Trigger: TGCTCCAGCCCAGTCCGAGTGTAGGTAAGAGGCTCATCTGTTTTCTTTGCTGGACTCTGAGTGCTGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp TTGAAGCCACAGACACGGGCCCAGAAGGCGTGTTTCTaGGGTGTTTGGCCATCACCTGCTTTAGTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: LKPQTRAQKACF*GVWPSPALVPK
Trigger: CTTGGGAACTAAAGCAGGTGATGGCCAAACACCCCAGAAACACGCCTTCTGGGCCCGTGTCTGTGGCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317977.10
ENST00000395643.6
ENST00000395645.4
ENST00000395647.6
ENST00000417251.6
CDS CAA 90 bp CTGCACATCCTTCACAGGGCAACCTGCTTACTAAGGATGCAAAGTTaGGAGCCAGAGGTGTGGGTTGGGGTTAGAGCCCATACTCCCCAG +
Preference number: 6 (lower is better)
Translates to: LHILHRATCLLRMQS*EPEVWVGVRAHTPQ
Trigger: CTGGGGAGTATGGGCTCTAACCCCAACCCACACCTCTGGCTCCAAACTTTGCATCCTTAGTAAGCAGGTTGCCCTGTGAAGGATGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS TCA 72 bp CCACAGTTACTGTGGAACATCTCAAGGAGGGGTGTCTaGGATCTCTCCGAGTCCTGCACAGGGTTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: PQLLWNISRRGV*DLSESCTGFPG
Trigger: TCCTGGAAACCCTGTGCAGGACTCGGAGAGATCTCAGACACCCCTCCTTGAGATGTTCCACAGTAACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 72 bp CACGCAGCCCACATCATCTGTTCGAGAGACGGACACTaGGTGTCTCTCCTCATAGACATGAGCACCTGGGAA +
Preference number: 6 (lower is better)
Translates to: HAAHIICSRDGH*VSLLIDMSTWE
Trigger: TTCCCAGGTGCTCATGTCTATGAGGAGAGACACCAAGTGTCCGTCTCTCGAACAGATGATGTGGGCTGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317977.10
ENST00000395647.6
CDS CAA 72 bp GGCCAAGAGCCCCTCTACAACAGGCACATGCTACACTaGTTCATCCAACAAACCACTGGTGAGGTGCTCACC +
Preference number: 6 (lower is better)
Translates to: GQEPLYNRHMLH*FIQQTTGEVLT
Trigger: GGTGAGCACCTCACCAGTGGTTTGTTGGATGAACAAGTGTAGCATGTGCCTGTTGTAGAGGGGCTCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 72 bp TTTGAAGACACTAGGATTTTTCACACTGGCCGGCATTaGTGGGAGCTGGGACCTCTGGCTGGCACATCCCCA +
Preference number: 6 (lower is better)
Translates to: FEDTRIFHTGRH*WELGPLAGTSP
Trigger: TGGGGATGTGCCAGCCAGAGGTCCCAGCTCCCACAAATGCCGGCCAGTGTGAAAAATCCTAGTGTCTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 90 bp AGCACCTGTCCCAGTCACTACATGCACATTTACCTGGGTGTCTACTaGTTTACTGCCTGTCTTCCCCTCCCAATGGAAGCACCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: STCPSHYMHIYLGVY*FTACLPLPMEAPGE
Trigger: CTCTCCTGGTGCTTCCATTGGGAGGGGAAGACAGGCAGTAAACAAGTAGACACCCAGGTAAATGTGCATGTAGTGACTGGGACAGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CCA 72 bp AAAGCACCTGTCCCAGTCACTACATGCACATTTACCTaGGTGTCTACTTGTTTACTGCCTGTCTTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: KAPVPVTTCTFT*VSTCLLPVFPS
Trigger: GGAGGGGAAGACAGGCAGTAAACAAGTAGACACCCAGGTAAATGTGCATGTAGTGACTGGGACAGGTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 72 bp CCCAGTCACTACATGCACATTTACCTGGGTGTCTACTaGTTTACTGCCTGTCTTCCCCTCCCAATGGAAGCA +
Preference number: 6 (lower is better)
Translates to: PSHYMHIYLGVY*FTACLPLPMEA
Trigger: TGCTTCCATTGGGAGGGGAAGACAGGCAGTAAACAAGTAGACACCCAGGTAAATGTGCATGTAGTGACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 72 bp GCACCAGGAGAGCAGGAGCCTCATCTCTTTAGTTCATaGCTGTGTCTCCCAGCATATAGTAGGTGCTTACTA +
Preference number: 6 (lower is better)
Translates to: APGEQEPHLFSS*LCLPAYSRCLL
Trigger: TAGTAAGCACCTACTATATGCTGGGAGACACAGCAATGAACTAAAGAGATGAGGCTCCTGCTCTCCTGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1
CDS CAA 90 bp CCAATGGAAGCACCAGGAGAGCAGGAGCCTCATCTCTTTAGTTCATaGCTGTGTCTCCCAGCATATAGTAGGTGCTTACTAAGCATTTGG +
Preference number: 6 (lower is better)
Translates to: PMEAPGEQEPHLFSS*LCLPAYSRCLLSIW
Trigger: CCAAATGCTTAGTAAGCACCTACTATATGCTGGGAGACACAGCAATGAACTAAAGAGATGAGGCTCCTGCTCTCCTGGTGCTTCCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584658.1