RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC5A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100170

Ensembl transcript IDs: ENST00000266088.9, ENST00000477969.1, ENST00000486394.1, ENST00000543737.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCATCAAGCTCCATCCTCAGCTTCCATGCATTCCTCAGTTTACCTaGTTGACACACTTGAGAGGGAAAGTCCAGGCAAAACTCAAGAGG +
Preference number: 1 (lower is better)
Translates to: PIKLHPQLPCIPQFT*LTHLRGKVQAKLKR
Trigger: CCTCTTGAGTTTTGCCTGGACTTTCCCTCTCAAGTGTGTCAATCAGGTAAACTGAGGAATGCATGGAAGCTGAGGATGGAGCTTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR TCA 90 bp ATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTaGGTGGACTTCCCTTCTGCAGCTCCAGTAGGTACAGATGGCTGT +
Preference number: 1 (lower is better)
Translates to: ITWLLILSLPFSGCD*VDFPSAAPVGTDGC
Trigger: ACAGCCATCTGTACCTACTGGAGCTGCAGAAGGGAAGTCCACTCAGTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR GCA 90 bp TTGACCTCACCTAATCTTTACAACAGCTCTGTGAAGTCTGCATTATaGTTGGAGGAACCTGAGGTTCAGAGAGTTTTAGGGACTCAGCCA +
Preference number: 1 (lower is better)
Translates to: LTSPNLYNSSVKSAL*LEEPEVQRVLGTQP
Trigger: TGGCTGAGTCCCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTGTTGTAAAGATTAGGTGAGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR TCA 90 bp GTGATTAAAATGAAGACATTAGGGTGGGTCCTATTCCAATATGACTaGTGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGA +
Preference number: 1 (lower is better)
Translates to: VIKMKTLGWVLFQYD*CPYQKSRFRTQTKG
Trigger: TCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATCAGTCATATTGGAATAGGACCCACCCTAATGTCTTCATTTTAATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCCTCCCCCACTAGCTTaGGGCTGGGGCCCGGGTCCC +
Preference number: 2 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKPPPLA*GWGPGP
Trigger: GGGACCCGGGCCCCAGCCTCAAGCTAGTGGGGGAGG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCAGTGGACTTCCCTTCTaGAGCTCCAGTAGGTACAGA +
Preference number: 2 (lower is better)
Translates to: GPSLLWKYYLPQASTSESSGLPF*SSSRYR
Trigger: TCTGTACCTACTGGAGCTGCAGAAGGGAAGTCCACT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACTGGATGTGACTGAGTaGACTTCCCTTCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLLDVTE*TSLLQL
Trigger: GAGCTGCAGAAGGGAAGTCCACTCAGTCACATCCAG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAACCCTGCTGACATCTTaGCCTCCAACTTCTAGCCTC +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLTLLTS*PPTSSL
Trigger: GAGGCTAGAAGTTGGAGGCCAAGATGTCAGCAGGGT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR CAA 90 bp ACCTCACCTAATCTTTACAACAGCTCTGTGAAGTCTGCATTATGCTaGGAGGAACCTGAGGTTCAGAGAGTTTTAGGGACTCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: TSPNLYNSSVKSALC*EEPEVQRVLGTQPR
Trigger: CCTTGGCTGAGTCCCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTGTTGTAAAGATTAGGTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGCCTTTTTCTGGATGTaGCTGAGTGGACTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLAFFWM*LSGLPF
Trigger: GAAGGGAAGTCCACTCAGTCACATCCAGAAAAAGGC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGCCTTTTTCTGGATGTaGCTGAGTGGACTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGAFFWM*LSGLPF
Trigger: GAAGGGAAGTCCACTCAGTCACATCCAGAAAAAGGC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCACCCGGAATCTACCTaGGACAGACTCACGTCAGAC +
Preference number: 2 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKHPEST*DRLTSD
Trigger: GTCTGACGTGAGTCTGTCTCAGGTAGATTCCGGGTG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAAGTGGACTTCCCTTCTaGAGCTCCAGTAGGTACAGA +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSGLPF*SSSRYR
Trigger: TCTGTACCTACTGGAGCTGCAGAAGGGAAGTCCACT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGGTCCCTCCCTTTTGTaGAAGTACTACCTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGGPSLL*KYYLPQ
Trigger: CTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGGTCCCTCCCTTTTGTaGAAGTACTACCTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLGPSLL*KYYLPQ
Trigger: CTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATTTTCTGGATGTGACTaGGTGGACTTCCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGFSGCD*VDFPSA
Trigger: TGCAGAAGGGAAGTCCACTCAGTCACATCCAGAAAA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATTTTCTGGATGTGACTaGGTGGACTTCCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLFSGCD*VDFPSA
Trigger: TGCAGAAGGGAAGTCCACTCAGTCACATCCAGAAAA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGAGCCATCTGGTCTGTaGTACTTTGTTATGGCATCC +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGEPSGL*YFVMAS
Trigger: GGATGCCATAACAAAGTAGCACAGACCAGATGGCTC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATCCAGTAGGTACAGATaGCTGTATCACACTGGCTTC +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSSRYR*LYHTGF
Trigger: GAAGCCAGTGTGATACAGCCATCTGTACCTACTGGA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGCCCAGAAAATCCCCTaGATTCAGGCTATCTGCCTC +
Preference number: 2 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKAQKIP*IQAICL
Trigger: GAGGCAGATAGCCTGAATCCAGGGGATTTTCTGGGC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAATTCCTCAGTTTACCTaGTTGACACACTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLIPQFT*LTHLRG
Trigger: CCCTCTCAAGTGTGTCAATCAGGTAAACTGAGGAAT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGAATGCCAAAATGAGTaGAATCCCAAACACGGGGAA +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLECQNE*NPKHGE
Trigger: TTCCCCGTGTTTGGGATTCCACTCATTTTGGCATTC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATTCAACACGCATTGCTaGAAATCTAAGACATTCCAG +
Preference number: 2 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGFNTHC*KSKTFQ
Trigger: CTGGAATGTCTTAGATTTTCAGCAATGCGTGTTGAA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAAAATAAATGTCTGCTaGTTGAGCCATCTGGTCTGT +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLKINVC*LSHLVC
Trigger: ACAGACCAGATGGCTCAAGCAGCAGACATTTATTTT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAACACATTTATCCACCTaGGCAAAATTTACAACTGGC +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLTHLST*AKFTTG
Trigger: GCCAGTTGTAAATTTTGCCCAGGTGGATAAATGTGT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACAGACATCAATCACATaGCTTCTGATTCTTAGTCTG +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLQTSIT*LLILSL
Trigger: CAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR CAA 90 bp TTTATTGGGCATTTTCTACGGACCGGGCCTTTTAAGCAGTATCAATaGACCTCACCTAATCTTTACAACAGCTCTGTGAAGTCTGCATTA +
Preference number: 2 (lower is better)
Translates to: FIGHFLRTGPFKQYQ*TSPNLYNSSVKSAL
Trigger: TAATGCAGACTTCACAGAGCTGTTGTAAAGATTAGGTGAGGTCAATTGATACTGCTTAAAAGGCCCGGTCCGTAGAAAATGCCCAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACACATTTATCCACCTaGGCAAAATTTACAACTGGC +
Preference number: 2 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKTHLST*AKFTTG
Trigger: GCCAGTTGTAAATTTTGCCCAGGTGGATAAATGTGT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAATGGCTGTATCACACTaGCTTCAAATGCATAAATTA +
Preference number: 2 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLMAVSH*LQMHKL
Trigger: TAATTTATGCATTTGAAGCCAGTGTGATACAGCCAT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATGGCTGTATCACACTaGCTTCAAATGCATAAATTA +
Preference number: 2 (lower is better)
Translates to: QTSITWLLILSLPFSGCDMAVSH*LQMHKL
Trigger: TAATTTATGCATTTGAAGCCAGTGTGATACAGCCAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGCCTCCCCCACTAGCTaGAGGCTGGGGCCCGGGTCC +
Preference number: 3 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLASPTS*RLGPGS
Trigger: GGACCCGGGCCCCAGCCTCAAGCTAGTGGGGGAGGC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CAA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGCCTCCCCCACTAGCTaGAGGCTGGGGCCCGGGTCC +
Preference number: 3 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGASPTS*RLGPGS
Trigger: GGACCCGGGCCCCAGCCTCAAGCTAGTGGGGGAGGC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR TCA 72 bp CAGCTCTGTGAAGTCTGCATTATGCTTGGAGGAACCTaGGGTTCAGAGAGTTTTAGGGACTCAGCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: QLCEVCIMLGGT*GSESFRDSAKV
Trigger: CACCTTGGCTGAGTCCCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACCGGGTCCCTCCCTTTaGTGGAAGTACTACCTTCCT +
Preference number: 3 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLPGPSL*WKYYLP
Trigger: AGGAAGGTAGTACTTCCACAAAAGGGAGGGACCCGG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR TCA 72 bp CTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTaGGTGGACTTCCCTTCTGCAGCTCCAGTAGGTACA +
Preference number: 3 (lower is better)
Translates to: LLILSLPFSGCD*VDFPSAAPVGT
Trigger: TGTACCTACTGGAGCTGCAGAAGGGAAGTCCACTCAGTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR TCA 72 bp CTCCATCCTCAGCTTCCATGCATTCCTCAGTTTACCTaGTTGACACACTTGAGAGGGAAAGTCCAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: LHPQLPCIPQFT*LTHLRGKVQAK
Trigger: TTTTGCCTGGACTTTCCCTCTCAAGTGTGTCAATCAGGTAAACTGAGGAATGCATGGAAGCTGAGGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR GCA 72 bp CCTAATCTTTACAACAGCTCTGTGAAGTCTGCATTATaGTTGGAGGAACCTGAGGTTCAGAGAGTTTTAGGG +
Preference number: 3 (lower is better)
Translates to: PNLYNSSVKSAL*LEEPEVQRVLG
Trigger: CCCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTGTTGTAAAGATTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR CCA 72 bp CTACCTGAGACAGACTCACGTCAGACATCAATCACATaGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGT +
Preference number: 3 (lower is better)
Translates to: LPETDSRQTSIT*LLILSLPFSGC
Trigger: ACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTGACGTGAGTCTGTCTCAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCGGCTGCATTGCGAATaGGCTCGTGGGTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESRLHCE*ARGSQQ
Trigger: CTGTTGAGACCCACGAGCTCATTCGCAATGCAGCCG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTTGCGAATGAGCTCGTaGGTCTCAACAGGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESLRMSS*VSTGRV
Trigger: CACCCGGCCTGTTGAGACCCACGAGCTCATTCGCAA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTGGACATCCCAAAGATaGACCCAGGCCATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESWTSQR*TQAMGG
Trigger: ACCTCCCATGGCCTGGGTTCATCTTTGGGATGTCCA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCCTCCCCCACTAGCTTaGGGCTGGGGCCCGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDPPPLA*GWGPGP
Trigger: GGGACCCGGGCCCCAGCCTCAAGCTAGTGGGGGAGG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGCTCCTCTTTGCTGTTaGGCAGGCTCCAACACAGAC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESAPLCC*AGSNTD
Trigger: GTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGTTCCCCTCTCCTGGTaGGTGTCACATCCCCACTTT +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESVPLSW*VSHPHF
Trigger: AAAGTGGGGATGTGACACGCACCAGGAGAGGGGAAC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGGAAGACAGCCGCAATaGGTGGTCCCAAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESGRQPQ*VVPSNW
Trigger: CCAGTTACTTGGGACCACCCATTGCGGCTGTCTTCC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATCTCAACAGGCCGGGTaGCCGCGGTGGTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSQQAG*PRWSWG
Trigger: GCCCCAAGACCACCGCGGTCACCCGGCCTGTTGAGA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCAGCCACCCTTCACGTaGGACATATTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESQPPFT*DIFLAE
Trigger: CTCAGCCAAGAATATGTCTCACGTGAAGGGTGGCTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCAATACGCTCCTCTTTaGTGTTGCGCAGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESQYAPL*CCAGSN
Trigger: GTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTTGGGTGCACCGTGCTaGTCTAGCCCACAAAATAGG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESLGAPC*SSPQNR
Trigger: CCTATTTTGTGGGCTAGAGCAGCACGGTGCACCCAA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCATTCAAAGCCTCCAATaGCGATGCCTGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESIQSLQ*RCLKLP
Trigger: GGGCAGCTTCAGGCATCGCCATTGGAGGCTTTGAAT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGCCCAGAAAATCCCCTaGATTCAGGCTATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESAQKIP*IQAICL
Trigger: GAGGCAGATAGCCTGAATCCAGGGGATTTTCTGGGC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATCCAATGGCGATGCCTaGAGCTGCCCCAGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSNGDA*SCPSPG
Trigger: GCCGGGACTGGGGCAGCTTCAGGCATCGCCATTGGA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGCCTTTTTCTGGATGTaGCTGAGTGGACTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESAFFWM*LSGLPF
Trigger: GAAGGGAAGTCCACTCAGTCACATCCAGAAAAAGGC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTCTCAGATGCTCTCTTaGGGACCTTGGCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESSQMLS*GPWRRC
Trigger: ACATCTACGCCAAGGTCCGCAAGAGAGCATCTGAGA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTCCACACAAGTCTGCTaGCCCAAATACCTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESSTQVC*PKYLLA
Trigger: GGCTAGAAGGTATTTGGGGCAGCAGACTTGTGTGGA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGTCCCAAGTAACTGGTaGTGGACTGGATGTAATCGA +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESVPSNW*WTGCNR
Trigger: TCGATTACATCCAGTCCATCACCAGTTACTTGGGAC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCAGTTTCTCACAGTGTaGCTGTATTTGGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESQFLTV*LYLEVG
Trigger: CCCTACCTCCAAATACAGTCACACTGTGAGAAACTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGAGCCATCTGGTCTGTaGTACTTTGTTATGGCATCC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESEPSGL*YFVMAS
Trigger: GGATGCCATAACAAAGTAGCACAGACCAGATGGCTC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCAGCTCTGTGAAGTCTaGATTATGCTTGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESQLCEV*IMLGGT
Trigger: GGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGATGAACCCAGGCCATaGGAGGTCTCCCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGDEPRP*EVSREG
Trigger: CCCCTCACGGGAGACCTCCCATGGCCTGGGTTCATC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTCCAGTAGGTACAGATaGCTGTATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESSSRYR*LYHTGF
Trigger: GAAGCCAGTGTGATACAGCCATCTGTACCTACTGGA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGCACCCAGGCGATGCTaGTGCCAATCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGAPRRC*CQSAPG
Trigger: TCCTGGTGCTGATTGGCATCAGCATCGCCTGGGTGC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAGCCTCCAATGGCGATaGCTGAAGCTGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSLQWR*LKLPQS
Trigger: GGACTGGGGCAGCTTCAGGCATCGCCATTGGAGGCT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATCGCCCAGGCAGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSPRQE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCTGCCTGGGCGA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCGGGAGACTCTGGCTTaGAAATCTCCAAAATGCATA +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESRETLA*KSPKCI
Trigger: TATGCATTTTGGAGATTTCCAAGCCAGAGTCTCCCG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATGGGAGGTCTCCCGTaGGGGGATCTCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGMGGLP*GDLGRC
Trigger: ACATCTTCCGAGATCCCCTCACGGGAGACCTCCCAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGCACCCAGGCGATGCTaGTGCCAATCAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDAPRRC*CQSAPG
Trigger: TCCTGGTGCTGATTGGCATCAGCATCGCCTGGGTGC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCTCAGTAATCATACGTaGAATCCCAATCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESLSNHT*NPNQKS
Trigger: GGACTTCTGATTGGGATTTCACGTATGATTACTGAG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGGGACTCAGCCAAGGTaGGGAACTTGGTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLGTQPR*GTWWSW
Trigger: CCATGACCACCAAGTTCCTCACCTTGGCTGAGTCCC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGGGACTCAGCCAAGGTaGGGAACTTGGTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGGTQPR*GTWWSW
Trigger: CCATGACCACCAAGTTCCTCACCTTGGCTGAGTCCC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAGCCTCCAATGGCGATaGCTGAAGCTGCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSLQWR*LKLPQS
Trigger: GGACTGGGGCAGCTTCAGGCATCGCCATTGGAGGCT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGATGAACCCAGGCCATaGGAGGTCTCCCGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKDEPRP*EVSREG
Trigger: CCCCTCACGGGAGACCTCCCATGGCCTGGGTTCATC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATCTGTTCCCCTCTCCTaGTGCGTGTCACATCCCCAC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSVPLS*CVSHPH
Trigger: GTGGGGATGTGACACGCACCAGGAGAGGGGAACAGA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAAGACCCCACCAGCATaGTCACCGTCTGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLKTPPA*SPSARC
Trigger: ACACCTTGCAGACGGTGATCATGCTGGTGGGGTCTT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATGGGAGGTCTCCCGTaGGGGGATCTCGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDMGGLP*GDLGRC
Trigger: ACATCTTCCGAGATCCCCTCACGGGAGACCTCCCAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATGGACATCCCAAAGATaGACCCAGGCCATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGWTSQR*TQAMGG
Trigger: ACCTCCCATGGCCTGGGTTCATCTTTGGGATGTCCA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACGCTGCACAATGACCTaGTCTGTGCACCAGTACCAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLRCTMT*SVHQYH
Trigger: GTGGTACTGGTGCACAGATCAGGTCATTGTGCAGCG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGCAGTCCATTGGGCATaGGCTCCACCACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGAVHWA*APPLRL
Trigger: CAACCTTAGTGGTGGAGCTCATGCCCAATGGACTGC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACACCCGGAATCTACCTaGGACAGACTCACGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLHPEST*DRLTSD
Trigger: GTCTGACGTGAGTCTGTCTCAGGTAGATTCCGGGTG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTTCAACACGCATTGCTaGAAATCTAAGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESFNTHC*KSKTFQ
Trigger: CTGGAATGTCTTAGATTTTCAGCAATGCGTGTTGAA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGGTCCTATTCCAATATaGCTGATGTCCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESGPIPI*LMSLSE
Trigger: TTCTGATAAGGACATCAGTCATATTGGAATAGGACC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTCTTGGGGCTCCAGGTaGTACTGTCCATGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSWGSR*YCPWWQ
Trigger: CTGCCACCATGGACAGTAGCACCTGGAGCCCCAAGA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACACCATACTTCGGCCTaGCAGGAAGAAGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLHHTSA*QEEASN
Trigger: GTTGGAGGCTTCTTCCTGGCAGGCCGAAGTATGGTG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGATACCCACACAGGATaGAGCCACCCTTCACGTGAG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGDTHTG*SHPSRE
Trigger: CTCACGTGAAGGGTGGCTGCATCCTGTGTGGGTATC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAGTTGCTGGGCTCCATaGAGCTCCCGGTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSCWAP*SSRFHK
Trigger: CTTATGGAACCGGGAGCTGCATGGAGCCCAGCAACT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAAGTTGCTGGGCTCCATaGAGCTCCCGGTTCCATAAG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSCWAP*SSRFHK
Trigger: CTTATGGAACCGGGAGCTGCATGGAGCCCAGCAACT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGCTCCTCTTTGCTGTTaGGCAGGCTCCAACACAGAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLAPLCC*AGSNTD
Trigger: GTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACTTCCTCAGGTACTCTaGCATTGTCACCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLPQVL*HCHHPS
Trigger: GCTGGGGTGGTGACAATGCCAGAGTACCTGAGGAAG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCATTTTTCCTGAAAGGTaGTGTTGCCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESIFPER*CCHQTL
Trigger: TAGTGTCTGATGGCAACACCACCTTTCAGGAAAAAT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCAGACATCAATCACATaGCTTCTGATTCTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESQTSIT*LLILSL
Trigger: CAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACTGCCGAGATCTTGGTaGAAATGTAGAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLPRSW*KCRAAG
Trigger: CCCTGCTGCTCTACATTTTCACCAAGATCTCGGCAG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGAGCTCTTTCTCAGATaGTCTCTTGCGGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGELFLR*SLADLG
Trigger: GCCAAGGTCCGCAAGAGAGCATCTGAGAAAGAGCTC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCCAATAAGAGAAAGATaGCTAAATACAGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESPIRER*LNTDSG
Trigger: GCCTGAATCTGTATTTAGCCATCTTTCTCTTATTGG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGACAGCCGCAATGGGTaGTCCCAAGTAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLDSRNG*SQVTGD
Trigger: ATCACCAGTTACTTGGGACCACCCATTGCGGCTGTC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGACAGCCGCAATGGGTaGTCCCAAGTAACTGGTGAT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGDSRNG*SQVTGD
Trigger: ATCACCAGTTACTTGGGACCACCCATTGCGGCTGTC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACTTCCTCAGTCATCTTaGGTGCACCGTGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLLPQSS*VHRAAL
Trigger: TAGAGCAGCACGGTGCACCCAAGATGACTGAGGAAG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACTGGATGTGACTGAGTaGACTTCCCTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLDVTE*TSLLQL
Trigger: GAGCTGCAGAAGGGAAGTCCACTCAGTCACATCCAG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCAGGCAGGAGTGCAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKQAGVQ*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTGCACTCCTGCCTG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCTGCCGAGATCTTGGTaGAAATGTAGAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLPRSW*KCRAAG
Trigger: CCCTGCTGCTCTACATTTTCACCAAGATCTCGGCAG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAAGACCCCACCAGCATaGTCACCGTCTGCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKKTPPA*SPSARC
Trigger: ACACCTTGCAGACGGTGATCATGCTGGTGGGGTCTT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCGCTGCACAATGACCTaGTCTGTGCACCAGTACCAC +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKRCTMT*SVHQYH
Trigger: GTGGTACTGGTGCACAGATCAGGTCATTGTGCAGCG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAAGACATATTCTTGGCTaGGAGGCAGCGCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGRHILG*EAALHN
Trigger: ATTGTGCAGCGCTGCCTCTCAGCCAAGAATATGTCT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAGACATATTCTTGGCTaGGAGGCAGCGCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLRHILG*EAALHN
Trigger: ATTGTGCAGCGCTGCCTCTCAGCCAAGAATATGTCT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCAGCCACCCTTCACGTaGGACATATTCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDQPPFT*DIFLAE
Trigger: CTCAGCCAAGAATATGTCTCACGTGAAGGGTGGCTG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGCAGTCCATTGGGCATaGGCTCCACCACTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKAVHWA*APPLRL
Trigger: CAACCTTAGTGGTGGAGCTCATGCCCAATGGACTGC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACCACGGAAGACAGAGTaGGATATGACCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGPRKTE*DMTICN
Trigger: GTTGCAGATGGTCATATCTCACTCTGTCTTCCGTGG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACCACGGAAGACAGAGTaGGATATGACCATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLPRKTE*DMTICN
Trigger: GTTGCAGATGGTCATATCTCACTCTGTCTTCCGTGG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAGGTGCTACTGTCCATaGTGGCAGCGTTGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKRCYCP*WQRCVL
Trigger: AAGGACGCAACGCTGCCACCATGGACAGTAGCACCT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATTCAAAGCCTCCAATaGCGATGCCTGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDIQSLQ*RCLKLP
Trigger: GGGCAGCTTCAGGCATCGCCATTGGAGGCTTTGAAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCTTCCTCAGGTACTCTaGCATTGTCACCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKLPQVL*HCHHPS
Trigger: GCTGGGGTGGTGACAATGCCAGAGTACCTGAGGAAG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCTTCCTCAGTCATCTTaGGTGCACCGTGCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLPQSS*VHRAAL
Trigger: TAGAGCAGCACGGTGCACCCAAGATGACTGAGGAAG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCATGGCTGTATCACACTaGCTTCAAATGCATAAATTA +
Preference number: 4 (lower is better)
Translates to: GPSLLWKYYLPQASTSESMAVSH*LQMHKL
Trigger: TAATTTATGCATTTGAAGCCAGTGTGATACAGCCAT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCTGGATGTGACTGAGTaGACTTCCCTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLDVTE*TSLLQL
Trigger: GAGCTGCAGAAGGGAAGTCCACTCAGTCACATCCAG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGCCCAGAAAATCCCCTaGATTCAGGCTATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDAQKIP*IQAICL
Trigger: GAGGCAGATAGCCTGAATCCAGGGGATTTTCTGGGC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACACCCTGCTGACATCTTaGCCTCCAACTTCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDTLLTS*PPTSSL
Trigger: GAGGCTAGAAGTTGGAGGCCAAGATGTCAGCAGGGT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATCATGTACTTTTCCATaGAGGCGTCATAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGSCTFP*RRHSLP
Trigger: TGGGAGGCTATGACGCCTTCATGGAAAAGTACATGA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAAGACAGAGTGAGATATaGCCATCTGCAACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGRQSEI*PSATKE
Trigger: CTCCTTGGTTGCAGATGGTCATATCTCACTCTGTCT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACAGTTTCTCACAGTGTaGCTGTATTTGGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGQFLTV*LYLEVG
Trigger: CCCTACCTCCAAATACAGTCACACTGTGAGAAACTG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATGCTTGGAGGAACCTaGGGTTCAGAGAGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGMLGGT*GSESFR
Trigger: CCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGATGGAGATATCGGCTaGATTGCGAATGAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDDGDIG*IANELV
Trigger: CACGAGCTCATTCGCAATGCAGCCGATATCTCCATC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACCTGAAAGGTGGTGTTaGCATCAGACACTATGGTTG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGPERWC*HQTLWL
Trigger: CAACCATAGTGTCTGATGGCAACACCACCTTTCAGG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACCTGAAAGGTGGTGTTaGCATCAGACACTATGGTTG +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLPERWC*HQTLWL
Trigger: CAACCATAGTGTCTGATGGCAACACCACCTTTCAGG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTCTCAGATGCTCTCTTaGGGACCTTGGCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSQMLS*GPWRRC
Trigger: ACATCTACGCCAAGGTCCGCAAGAGAGCATCTGAGA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGAGCTCTTTCTCAGATaGTCTCTTGCGGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKELFLR*SLADLG
Trigger: GCCAAGGTCCGCAAGAGAGCATCTGAGAAAGAGCTC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCAATACGCTCCTCTTTaGTGTTGCGCAGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKQYAPL*CCAGSN
Trigger: GTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTTGGGTGCACCGTGCTaGTCTAGCCCACAAAATAGG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKLGAPC*SSPQNR
Trigger: CCTATTTTGTGGGCTAGAGCAGCACGGTGCACCCAA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAGTGGACTTCCCTTCTaGAGCTCCAGTAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSGLPF*SSSRYR
Trigger: TCTGTACCTACTGGAGCTGCAGAAGGGAAGTCCACT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACCCCACTTTGATAACTaGTTCCACACAAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLPHFDN*FHTSLL
Trigger: CAGCAGACTTGTGTGGAAGCAGTTATCAAAGTGGGG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGCCAGCCCCACAAAGTaGCCACTTCCAATGTTACTA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDASPTK*PLPMLL
Trigger: TAGTAACATTGGAAGTGGCCACTTTGTGGGGCTGGC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATTGGATAGGCGATGTTaGTACAGCCAACCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLDRRC*YSQPWY
Trigger: GTACCAAGGTTGGCTGTACCAACATCGCCTATCCAA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTCCTTAGGGCCTTCTTaGATGTTCTCCTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSLGPS*MFSSSA
Trigger: TGCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACAGGCAAAATATGCATaGCAAAAGACAGCCACGGTC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLQAKYA*QKTATV
Trigger: GACCGTGGCTGTCTTTTGCCATGCATATTTTGCCTG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATCCAGTAGGTACAGATaGCTGTATCACACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSSRYR*LYHTGF
Trigger: GAAGCCAGTGTGATACAGCCATCTGTACCTACTGGA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGTCCCAAGTAACTGGTaGTGGACTGGATGTAATCGA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDVPSNW*WTGCNR
Trigger: TCGATTACATCCAGTCCATCACCAGTTACTTGGGAC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATTCCTCAGTTTACCTaGTTGACACACTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGIPQFT*LTHLRG
Trigger: CCCTCTCAAGTGTGTCAATCAGGTAAACTGAGGAAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAGACAGAGTGAGATATaGCCATCTGCAACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDRQSEI*PSATKE
Trigger: CTCCTTGGTTGCAGATGGTCATATCTCACTCTGTCT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATCAAGACTCACTTGCTaGCTTCCTAACCCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSRLTC*LPNPQF
Trigger: AAACTGAGGGTTAGGAAGTCAGCAAGTGAGTCTTGA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAAACCTTTGTATCATTTaGCCAACATCTCCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGNLCII*PTSPQS
Trigger: GGACTGGGGAGATGTTGGTCAAATGATACAAAGGTT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGATCTTGGGTGCACCGTaGTGCTCTAGCCCACAAAAT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKILGAP*CSSPQN
Trigger: ATTTTGTGGGCTAGAGCAGCACGGTGCACCCAAGAT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGTGAAGTCTGCATTATaGTTGGAGGAACCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGVKSAL*LEEPEV
Trigger: AACCTCAGGTTCCTCCAAGCATAATGCAGACTTCAC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGCTTCCACACAAGTCTaGTGCCCCAAATACCTTCTA +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDASTQV*CPKYLL
Trigger: TAGAAGGTATTTGGGGCAGCAGACTTGTGTGGAAGC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGAAGGAGTCGGCCCTTaGAGTGTAGCATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKEGVGP*SVAFFL
Trigger: CAGGAAAAATGCTACACTCCAAGGGCCGACTCCTTC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATGGTACAGCCAACCTTaGTACCGCAATATTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLWYSQP*YRNISH
Trigger: GTGAGAAATATTGCGGTACCAAGGTTGGCTGTACCA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGATGGTACAGCCAACCTTaGTACCGCAATATTTCTCAC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGWYSQP*YRNISH
Trigger: GTGAGAAATATTGCGGTACCAAGGTTGGCTGTACCA...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTTGGATAGGCGATGTTaGTACAGCCAACCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLDRRC*YSQPWY
Trigger: GTACCAAGGTTGGCTGTACCAACATCGCCTATCCAA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTCCCCAAAAGGCTCCTaGCTCATTGACTCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKSPKGS*LIDSLP
Trigger: TGGAAGAGAGTCAATGAGCCAGGAGCCTTTTGGGGA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACGGGAGACTCTGGCTTaGAAATCTCCAAAATGCATA +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGRETLA*KSPKCI
Trigger: TATGCATTTTGGAGATTTCCAAGCCAGAGTCTCCCG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAGTCTGCATTATGCTTaGAGGAACCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSLHYA*RNLRFR
Trigger: TCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR CAA 72 bp CAGATGAAAAATGAAGGTTCAAGGACATTGATCACGTaGCTCGGGGTATATCTGTACTCTGAGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QMKNEGSRTLIT*LGVYLYSEPSP
Trigger: AGGAGAAGGCTCAGAGTACAGATATACCCCGAGCAACGTGATCAATGTCCTTGAACCTTCATTTTTCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTCATGTACTTTTCCATaGAGGCGTCATAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKSCTFP*RRHSLP
Trigger: TGGGAGGCTATGACGCCTTCATGGAAAAGTACATGA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATATTTCTCACATTCTaGAGGGACGACACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGIFLTF*RDDTGN
Trigger: ATTGCCTGTGTCGTCCCTTCAGAATGTGAGAAATAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACTCAGTAATCATACGTaGAATCCCAATCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLSNHT*NPNQKS
Trigger: GGACTTCTGATTGGGATTTCACGTATGATTACTGAG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTTTTCTGGATGTGACTaGGTGGACTTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKFSGCD*VDFPSA
Trigger: TGCAGAAGGGAAGTCCACTCAGTCACATCCAGAAAA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAAGGTTCAAGGACATTaGTCACGTTGCTCGGGGTAT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKKVQGH*SRCSGY
Trigger: ATACCCCGAGCAACGTGATCAATGTCCTTGAACCTT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGATGCTTGGAGGAACCTaGGGTTCAGAGAGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKMLGGT*GSESFR
Trigger: CCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCAT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCAGCTCTGTGAAGTCTaGATTATGCTTGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKQLCEV*IMLGGT
Trigger: GGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATCAGTGAGATCATGTaGTATTTGTCTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGISEIM*YLSFWG
Trigger: GCCCCAGAAAGACAAATACCACATGATCTCACTGAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACAAAGAGCCCACTTTTaGGACAGAGTCTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGQRAHF*DRVFFC
Trigger: ACAGAAAAAGACTCTGTCCCAAAAGTGGGCTCTTTG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543737.2
3UTR CAA 72 bp ATGCATCCCAAGTCATTAGTAACCAGTGAGCATACTTaGTGTAGCCACAAGAAAAGGTTAACTAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MHPKSLVTSEHT*CSHKKRLTKGQ
Trigger: CTGGCCCTTAGTTAACCTTTTCTTGTGGCTACACAAAGTATGCTCACTGGTTACTAATGACTTGGGATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
3UTR CAA 72 bp AATCTTTACAACAGCTCTGTGAAGTCTGCATTATGCTaGGAGGAACCTGAGGTTCAGAGAGTTTTAGGGACT +
Preference number: 4 (lower is better)
Translates to: NLYNSSVKSALC*EEPEVQRVLGT
Trigger: AGTCCCTAAAACTCTCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACTTCACAGAGCTGTTGTAAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATATTTCTCACATTCTaGAGGGACGACACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDIFLTF*RDDTGN
Trigger: ATTGCCTGTGTCGTCCCTTCAGAATGTGAGAAATAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGTGAAGTCTGCATTATaGTTGGAGGAACCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKVKSAL*LEEPEV
Trigger: AACCTCAGGTTCCTCCAAGCATAATGCAGACTTCAC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATTTTTCCTGAAAGGTaGTGTTGCCATCAGACACTA +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGIFPER*CCHQTL
Trigger: TAGTGTCTGATGGCAACACCACCTTTCAGGAAAAAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGAATGCCAAAATGAGTaGAATCCCAAACACGGGGAA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKECQNE*NPKHGE
Trigger: TTCCCCGTGTTTGGGATTCCACTCATTTTGGCATTC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAGTCTGCATTATGCTTaGAGGAACCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKSLHYA*RNLRFR
Trigger: TCTGAACCTCAGGTTCCTCCAAGCATAATGCAGACT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAGCAGTAATGTTTATTaGGCATTTTCTACGGACCGG +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSSNVY*AFSTDR
Trigger: CCGGTCCGTAGAAAATGCCCAATAAACATTACTGCT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATCAGTGAGATCATGTaGTATTTGTCTTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QTSITWLLILSLPFSGCDISEIM*YLSFWG
Trigger: GCCCCAGAAAGACAAATACCACATGATCTCACTGAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACCAATAAGAGAAAGATaGCTAAATACAGATTCAGGC +
Preference number: 4 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLPIRER*LNTDSG
Trigger: GCCTGAATCTGTATTTAGCCATCTTTCTCTTATTGG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAATCAGACACTATGGTTaGAATGGCTTTCATGTACTT +
Preference number: 4 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGIRHYG*NGFHVL
Trigger: AAGTACATGAAAGCCATTCCAACCATAGTGTCTGAT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTGCCATCAGACACTATaGTTGGAATGGCTTTCATGT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKCHQTL*LEWLSC
Trigger: ACATGAAAGCCATTCCAACCATAGTGTCTGATGGCA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTTCAACACGCATTGCTaGAAATCTAAGACATTCCAG +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKFNTHC*KSKTFQ
Trigger: CTGGAATGTCTTAGATTTTCAGCAATGCGTGTTGAA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR TCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGGTCCTATTCCAATATaGCTGATGTCCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKGPIPI*LMSLSE
Trigger: TTCTGATAAGGACATCAGTCATATTGGAATAGGACC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR GCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAAAATAAATGTCTGCTaGTTGAGCCATCTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKKINVC*LSHLVC
Trigger: ACAGACCAGATGGCTCAAGCAGCAGACATTTATTTT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGATCAGACACTATGGTTaGAATGGCTTTCATGTACTT +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKIRHYG*NGFHVL
Trigger: AAGTACATGAAAGCCATTCCAACCATAGTGTCTGAT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CCA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGATGGCTGTATCACACTaGCTTCAAATGCATAAATTA +
Preference number: 4 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKMAVSH*LQMHKL
Trigger: TAATTTATGCATTTGAAGCCAGTGTGATACAGCCAT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 90 bp GGCCATCACTACCACGAAGTAGATAACGATGATGGAGATATCGGCTaGATTGCGAATGAGCTCGTGGGTCTCAACAGGCCGGGTGACCGC +
Preference number: 5 (lower is better)
Translates to: GHHYHEVDNDDGDIG*IANELVGLNRPGDR
Trigger: GCGGTCACCCGGCCTGTTGAGACCCACGAGCTCATTCGCAATGCAGCCGATATCTCCATCATCGTTATCTACTTCGTGGTAGTGATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGAGATATCGGCTGCATaGCGAATGAGCTCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESEISAA*RMSSWV
Trigger: GACCCACGAGCTCATTCGCAATGCAGCCGATATCTC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCACATCCGGAATGGGTTaGGTGAGGAGGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESTSGMG*VRREMT
Trigger: GGTCATCTCCCTCCTCACCAAACCCATTCCGGATGT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCCGGGTCCCTCCCTTTaGTGGAAGTACTACCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESPGPSL*WKYYLP
Trigger: AGGAAGGTAGTACTTCCACAAAAGGGAGGGACCCGG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGCCTCCCCCACTAGCTaGAGGCTGGGGCCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDASPTS*RLGPGS
Trigger: GGACCCGGGCCCCAGCCTCAAGCTAGTGGGGGAGGC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 90 bp TGTTCTCCTCTTCCGCATCCAGGTCAATACGCTCCTCTTTGCTGTTaGGCAGGCTCCAACACAGACGGTAGAGATGCACATCCGGAATGG +
Preference number: 5 (lower is better)
Translates to: CSPLPHPGQYAPLCC*AGSNTDGRDAHPEW
Trigger: CCATTCCGGATGTGCATCTCTACCGTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTGACCTGGATGCGGAAGAGGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 90 bp CTTGGATGTTCTCCTCTTCCGCATCCAGGTCAATACGCTCCTCTTTaGTGTTGCGCAGGCTCCAACACAGACGGTAGAGATGCACATCCG +
Preference number: 5 (lower is better)
Translates to: LGCSPLPHPGQYAPL*CCAGSNTDGRDAHP
Trigger: CGGATGTGCATCTCTACCGTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTGACCTGGATGCGGAAGAGGAGAACATCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCCAACAGTCCCACGATaGGTGGAAAACATAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESPTVPR*VENIAH
Trigger: GTGGGCTATGTTTTCCACCAATCGTGGGACTGTTGG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCGAAGGTTCAAGGACATaGATCACGTTGCTCGGGGTA +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESEGSRT*ITLLGV
Trigger: TACCCCGAGCAACGTGATCAATGTCCTTGAACCTTC...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 90 bp AGAGGGAGGCTCCAATCTCATGTGTTGTCTGTTCCCCTCTCCTGGTaGGTGTCACATCCCCACTTTGATAACTGCTTCCACACAAGTCTG +
Preference number: 5 (lower is better)
Translates to: RGRLQSHVLSVPLSW*VSHPHFDNCFHTSL
Trigger: CAGACTTGTGTGGAAGCAGTTATCAAAGTGGGGATGTGACACGCACCAGGAGAGGGGAACAGACAACACATGAGATTGGAGCCTCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCACGGGAGACTCTGGCTaGGAAATCTCCAAAATGCAT +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESTGDSG*EISKMH
Trigger: ATGCATTTTGGAGATTTCCAAGCCAGAGTCTCCCGT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCAGGACATTGATCACGTaGCTCGGGGTATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESRTLIT*LGVYLY
Trigger: GTACAGATATACCCCGAGCAACGTGATCAATGTCCT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS CCA 90 bp CAAAGAGGGAGGCTCCAATCTCATGTGTTGTCTGTTCCCCTCTCCTaGTGCGTGTCACATCCCCACTTTGATAACTGCTTCCACACAAGT +
Preference number: 5 (lower is better)
Translates to: QRGRLQSHVLSVPLS*CVSHPHFDNCFHTS
Trigger: ACTTGTGTGGAAGCAGTTATCAAAGTGGGGATGTGACACGCACCAGGAGAGGGGAACAGACAACACATGAGATTGGAGCCTCCCTCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGTGACCGCGGTGGTCTaGGGGCTCCAGGTGCTACTG +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKVTAVV*GLQVLL
Trigger: CAGTAGCACCTGGAGCCCCAAGACCACCGCGGTCAC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCTTGGTACAGCCAACCTaGGTACCGCAATATTTCTCA +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESLVQPT*VPQYFS
Trigger: TGAGAAATATTGCGGTACCAAGGTTGGCTGTACCAA...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCAAGGCTCCTGGCTCATaGACTCTCTTCCAGAAAATA +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESKAPGS*TLFQKI
Trigger: TATTTTCTGGAAGAGAGTCAATGAGCCAGGAGCCTT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 90 bp GCGTGTCACATCCCCACTTTGATAACTGCTTCCACACAAGTCTGCTaGCCCAAATACCTTCTAGCCTTCAAAGAGCCCACTTTTGGGACA +
Preference number: 5 (lower is better)
Translates to: ACHIPTLITASTQVC*PKYLLAFKEPTFGT
Trigger: TGTCCCAAAAGTGGGCTCTTTGAAGGCTAGAAGGTATTTGGGGCAGCAGACTTGTGTGGAAGCAGTTATCAAAGTGGGGATGTGACACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS CCA 90 bp GCTCCACCACTAAGGTTGGATAGGCGATGTTGGTACAGCCAACCTTaGTACCGCAATATTTCTCACATTCTGAAGGGACGACACAGGCAA +
Preference number: 5 (lower is better)
Translates to: APPLRLDRRCWYSQP*YRNISHILKGRHRQ
Trigger: TTGCCTGTGTCGTCCCTTCAGAATGTGAGAAATATTGCGGTACCAAGGTTGGCTGTACCAACATCGCCTATCCAACCTTAGTGGTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266088.9
ENST00000477969.1
ENST00000486394.1
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACGCTCCTCTTTGCTGTaGCGCAGGCTCCAACACAGA +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLRSSLL*RRLQHR
Trigger: TCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGAGGCCTCGCAGTCCATaGGGCATGAGCTCCACCACT +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKRPRSP*GMSSTT
Trigger: AGTGGTGGAGCTCATGCCCAATGGACTGCGAGGCCT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAATAATCGTGGGACAGTaGCTGGGCTCCATGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLIIVGQ*LGSMQL
Trigger: GAGCTGCATGGAGCCCAGCAACTGTCCCACGATTAT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGACTCCTTAGGGCCTTCTaGGATGTTCTCCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGLLRAF*DVLLFR
Trigger: GCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAG...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTATCTTCCTCAGTCATCTaGGGTGCACCGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLSSSVI*GAPCCS
Trigger: AGAGCAGCACGGTGCACCCAAGATGACTGAGGAAGA...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAGCTCCACCACTAAGGTaGGATAGGCGATGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGAPPLR*DRRCWY
Trigger: GTACCAACATCGCCTATCCAACCTTAGTGGTGGAGC...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACATAATCGTGGGACAGTaGCTGGGCTCCATGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDIIVGQ*LGSMQL
Trigger: GAGCTGCATGGAGCCCAGCAACTGTCCCACGATTAT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACACATCCGGAATGGGTTaGGTGAGGAGGGAGATGACC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDTSGMG*VRREMT
Trigger: GGTCATCTCCCTCCTCACCAAACCCATTCCGGATGT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCGCTCCTCTTTGCTGTaGCGCAGGCTCCAACACAGA +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKRSSLL*RRLQHR
Trigger: TCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCTCCTTAGGGCCTTCTaGGATGTTCTCCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLLRAF*DVLLFR
Trigger: GCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCCGGGTCCCTCCCTTTaGTGGAAGTACTACCTTCCT +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDPGPSL*WKYYLP
Trigger: AGGAAGGTAGTACTTCCACAAAAGGGAGGGACCCGG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCATCTGTGTTGTGGGTTaGTTTAGTATCTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESICVVG*FSISSR
Trigger: TCTTGAAGAGATACTAAACAAACCCACAACACAGAT...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGTCCCTCCCTTTTGTGGAAGTACTACCTTCCTCAGGCCTCCACTTCAGAGAGCCACCTAACTAAACCTTaGTATCATTTGACCAACATC +
Preference number: 5 (lower is better)
Translates to: GPSLLWKYYLPQASTSESHLTKP*YHLTNI
Trigger: GATGTTGGTCAAATGATACAAAGGTTTAGTTAGGTG...GCTCTCTGAAGTGGAGGCCTGAGGAAGGTAGTACTTCCACAAAAGGGAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTACTCCAATCTCATGTGTaGTCTGTTCCCCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLLQSHV*SVPLSW
Trigger: CCAGGAGAGGGGAACAGACAACACATGAGATTGGAG...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS CCA 90 bp TCAGGAACTTGTGTTTCTATTTCAATGGTCTCCTTAGGGCCTTCTTaGATGTTCTCCTCTTCCGCATCCAGGTCAATACGCTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: SGTCVSISMVSLGPS*MFSSSASRSIRSSL
Trigger: CAAAGAGGAGCGTATTGACCTGGATGCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAGACCATTGAAATAGAAACACAAGTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGGAAGGAGTCGGCCCTaGGAGTGTAGCATTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDGRSRP*ECSIFP
Trigger: AGGAAAAATGCTACACTCCAAGGGCCGACTCCTTCC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTCAATACGCTCCTCTTaGCTGTTGCGCAGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDSIRSS*LLRRLQ
Trigger: TTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTGA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGTCTTCCTCAGTCATCTaGGGTGCACCGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKSSSVI*GAPCCS
Trigger: AGAGCAGCACGGTGCACCCAAGATGACTGAGGAAGA...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GATGTCCTTATCAGAAGAGTAGATTTAGGACACAGACAAAAGGAAGGCCACGGAACCAGGATGATGCCATaGACGTTCAACACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: DVLIRRVDLGHRQKEGHGTRMMP*TFNTVL
Trigger: GAGGACAGTGTTGAACGTCAATGGCATCATCCTGGT...TCCGTGGCCTTCCTTTTGTCTGTGTCCTAAATCTACTCTTCTGATAAGGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAGAGATCATGTGGTATTaGTCTTTCTGGGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLEIMWY*SFWGKA
Trigger: GGCCTTGCCCCAGAAAGACAAATACCACATGATCTC...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGCTCCACCACTAAGGTaGGATAGGCGATGTTGGTAC +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKAPPLR*DRRCWY
Trigger: GTACCAACATCGCCTATCCAACCTTAGTGGTGGAGC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAAGGACATTGATCACGTaGCTCGGGGTATATCTGTAC +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLRTLIT*LGVYLY
Trigger: GTACAGATATACCCCGAGCAACGTGATCAATGTCCT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACGAGATCATGTGGTATTaGTCTTTCTGGGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDEIMWY*SFWGKA
Trigger: GGCCTTGCCCCAGAAAGACAAATACCACATGATCTC...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACCAGGATGATGCCATaGACGTTCAACACTGTCCTC +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKTRMMP*TFNTVL
Trigger: GAGGACAGTGTTGAACGTCAATGGCATCATCCTGGT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp GGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGACATTAGGGTGGGTCCTAACCAGTGAGCATACTTaGTGTAGCCACAAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GGRGFKEVIKMKTLGWVLTSEHT*CSHKKR
Trigger: CCTTTTCTTGTGGCTACACAAAGTATGCTCACTGGT...TAGGACCCACCCTAATGTCTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACACGGGAGACTCTGGCTaGGAAATCTCCAAAATGCAT +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDTGDSG*EISKMH
Trigger: ATGCATTTTGGAGATTTCCAAGCCAGAGTCTCCCGT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGGAAGGTTCAAGGACATaGATCACGTTGCTCGGGGTA +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKEGSRT*ITLLGV
Trigger: TACCCCGAGCAACGTGATCAATGTCCTTGAACCTTC...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTTGGTACAGCCAACCTaGGTACCGCAATATTTCTCA +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDLVQPT*VPQYFS
Trigger: TGAGAAATATTGCGGTACCAAGGTTGGCTGTACCAA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAAGGCTCCTGGCTCATaGACTCTCTTCCAGAAAATA +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDKAPGS*TLFQKI
Trigger: TATTTTCTGGAAGAGAGTCAATGAGCCAGGAGCCTT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACTGTCACATCCCCACTTaGATAACTGCTTCCACACAA +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDCHIPT*ITASTQ
Trigger: TTGTGTGGAAGCAGTTATCAAAGTGGGGATGTGACA...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACAAACCTTTGTATCATTaGACCAACATCTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDKPLYH*TNISPV
Trigger: GACTGGGGAGATGTTGGTCAAATGATACAAAGGTTT...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGCATCAGACACTATGGTaGGAATGGCTTTCATGTACT +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKHQTLW*EWLSCT
Trigger: AGTACATGAAAGCCATTCCAACCATAGTGTCTGATG...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CAGACATCAATCACATGGCTTCTGATTCTTAGTCTGCCTTTTTCTGGATGTGACCACCTAACTAAACCTTaGTATCATTTGACCAACATC +
Preference number: 5 (lower is better)
Translates to: QTSITWLLILSLPFSGCDHLTKP*YHLTNI
Trigger: GATGTTGGTCAAATGATACAAAGGTTTAGTTAGGTG...GTCACATCCAGAAAAAGGCAGACTAAGAATCAGAAGCCATGTGATTGATGTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS-3UTR CAA 90 bp CACAGTGTGACTGTATTTGGAGGTAGGGGCTTTAAAGAGGTGATTAAAATGAAGATCTGTGTTGTGGGTTaGTTTAGTATCTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: HSVTVFGGRGFKEVIKMKICVVG*FSISSR
Trigger: TCTTGAAGAGATACTAAACAAACCCACAACACAGAT...CTTCATTTTAATCACCTCTTTAAAGCCCCTACCTCCAAATACAGTCACACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS CAA 72 bp TCGTGGGTCTCAACAGGCCGGGTGACCGCGGTGGTCTaGGGGCTCCAGGTGCTACTGTCCATGGTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: SWVSTGRVTAVV*GLQVLLSMVAA
Trigger: CGCTGCCACCATGGACAGTAGCACCTGGAGCCCCAAGACCACCGCGGTCACCCGGCCTGTTGAGACCCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS CAA 90 bp CGAATGAGCTCGTGGGTCTCAACAGGCCGGGTGACCGCGGTGGTCTaGGGGCTCCAGGTGCTACTGTCCATGGTGGCAGCGTTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: RMSSWVSTGRVTAVV*GLQVLLSMVAALRP
Trigger: AGGACGCAACGCTGCCACCATGGACAGTAGCACCTGGAGCCCCAAGACCACCGCGGTCACCCGGCCTGTTGAGACCCACGAGCTCATTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS CAA 72 bp CGGCCTGCCAGGAAGAAGCCTCCAACAGTCCCACGATaGGTGGAAAACATAGCCCACAGTCCGACGGCCATC +
Preference number: 6 (lower is better)
Translates to: RPARKKPPTVPR*VENIAHSPTAI
Trigger: GATGGCCGTCGGACTGTGGGCTATGTTTTCCACCAATCGTGGGACTGTTGGAGGCTTCTTCCTGGCAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS CCA 72 bp ATGATGGAGATATCGGCTGCATTGCGAATGAGCTCGTaGGTCTCAACAGGCCGGGTGACCGCGGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: MMEISAALRMSS*VSTGRVTAVVL
Trigger: CAAGACCACCGCGGTCACCCGGCCTGTTGAGACCCACGAGCTCATTCGCAATGCAGCCGATATCTCCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS GCA 72 bp CTTCCGCATCCAGGTCAATACGCTCCTCTTTGCTGTTaGGCAGGCTCCAACACAGACGGTAGAGATGCACAT +
Preference number: 6 (lower is better)
Translates to: LPHPGQYAPLCC*AGSNTDGRDAH
Trigger: ATGTGCATCTCTACCGTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTGACCTGGATGCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 72 bp TCTCCTCTTCCGCATCCAGGTCAATACGCTCCTCTTTaGTGTTGCGCAGGCTCCAACACAGACGGTAGAGAT +
Preference number: 6 (lower is better)
Translates to: SPLPHPGQYAPL*CCAGSNTDGRD
Trigger: ATCTCTACCGTCTGTGTTGGAGCCTGCGCAACAGCAAAGAGGAGCGTATTGACCTGGATGCGGAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS GCA 72 bp TACCACGAAGTAGATAACGATGATGGAGATATCGGCTaGATTGCGAATGAGCTCGTGGGTCTCAACAGGCCG +
Preference number: 6 (lower is better)
Translates to: YHEVDNDDGDIG*IANELVGLNRP
Trigger: CGGCCTGTTGAGACCCACGAGCTCATTCGCAATGCAGCCGATATCTCCATCATCGTTATCTACTTCGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000266088.9
CDS GCA 72 bp CTCTCCTGGTGCGTGTCACATCCCCACTTTGATAACTaGTTCCACACAAGTCTGCTGCCCCAAATACCTTCT +
Preference number: 6 (lower is better)
Translates to: LSWCVSHPHFDN*FHTSLLPQIPS
Trigger: AGAAGGTATTTGGGGCAGCAGACTTGTGTGGAAGCAGTTATCAAAGTGGGGATGTGACACGCACCAGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS GCA 72 bp CTCCAATCTCATGTGTTGTCTGTTCCCCTCTCCTGGTaGGTGTCACATCCCCACTTTGATAACTGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: LQSHVLSVPLSW*VSHPHFDNCFH
Trigger: GTGGAAGCAGTTATCAAAGTGGGGATGTGACACGCACCAGGAGAGGGGAACAGACAACACATGAGATTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS CCA 72 bp AGGCTCCAATCTCATGTGTTGTCTGTTCCCCTCTCCTaGTGCGTGTCACATCCCCACTTTGATAACTGCTTC +
Preference number: 6 (lower is better)
Translates to: RLQSHVLSVPLS*CVSHPHFDNCF
Trigger: GAAGCAGTTATCAAAGTGGGGATGTGACACGCACCAGGAGAGGGGAACAGACAACACATGAGATTGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS GCA 72 bp CACATCCCCACTTTGATAACTGCTTCCACACAAGTCTaGTGCCCCAAATACCTTCTAGCCTTCAAAGAGCCC +
Preference number: 6 (lower is better)
Translates to: HIPTLITASTQV*CPKYLLAFKEP
Trigger: GGGCTCTTTGAAGGCTAGAAGGTATTTGGGGCAGCAGACTTGTGTGGAAGCAGTTATCAAAGTGGGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS GCA 72 bp ATCCCCACTTTGATAACTGCTTCCACACAAGTCTGCTaGCCCAAATACCTTCTAGCCTTCAAAGAGCCCACT +
Preference number: 6 (lower is better)
Translates to: IPTLITASTQVC*PKYLLAFKEPT
Trigger: AGTGGGCTCTTTGAAGGCTAGAAGGTATTTGGGGCAGCAGACTTGTGTGGAAGCAGTTATCAAAGTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543737.2
CDS CAA 90 bp CTCAGGAACTTGTGTTTCTATTTCAATGGTCTCCTTAGGGCCTTCTaGGATGTTCTCCTCTTCCGCATCCAGGTCAATACGCTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: LRNLCFYFNGLLRAF*DVLLFRIQVNTLLF
Trigger: AAAGAGGAGCGTATTGACCTGGATGCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAGACCATTGAAATAGAAACACAAGTTCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS CCA 72 bp TGTGTTTCTATTTCAATGGTCTCCTTAGGGCCTTCTTaGATGTTCTCCTCTTCCGCATCCAGGTCAATACGC +
Preference number: 6 (lower is better)
Translates to: CVSISMVSLGPS*MFSSSASRSIR
Trigger: GCGTATTGACCTGGATGCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAGACCATTGAAATAGAAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2
CDS CAA 72 bp TTGTGTTTCTATTTCAATGGTCTCCTTAGGGCCTTCTaGGATGTTCTCCTCTTCCGCATCCAGGTCAATACG +
Preference number: 6 (lower is better)
Translates to: LCFYFNGLLRAF*DVLLFRIQVNT
Trigger: CGTATTGACCTGGATGCGGAAGAGGAGAACATCCAAGAAGGCCCTAAGGAGACCATTGAAATAGAAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266088.9
ENST00000543737.2