RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC52A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000101276

Ensembl transcript IDs: ENST00000217254.11, ENST00000381944.5, ENST00000473664.2, ENST00000488495.3, ENST00000645534.1, ENST00000674666.1, ENST00000675066.1, ENST00000675466.1, ENST00000676154.1

Found 792 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGACCAGAGGGAACATGAGCAGCGCTCCGAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCACAAGAGGGCGCTGCGGCTGAGGTCG +
Preference number: 1 (lower is better)
Translates to: LTRGNMSSAPSSEPS*TAAPHHKRALRLRS
Trigger: CGACCTCAGCCGCAGCGCCCTCTTGTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCCTCTGGTCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 90 bp GAACCCACGGAATACTCTCTAGGTGCGAGGAGCGCCTTCTGGGAGTaGGCCTGCGGGGCCGACGGGTCCCATGAGTTGGCCGCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: EPTEYSLGARSAFWE*ACGADGSHELAARG
Trigger: CCCCCGGGCGGCCAACTCATGGGACCCGTCGGCCCCGCAGGCTCACTCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTCCGTGGGTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 90 bp AGAACTCTCACAGGGCTCAGGGGAACCCACGGAATACTCTCTAGGTaGGAGGAGCGCCTTCTGGGAGTGAGCCTGCGGGGCCGACGGGTC +
Preference number: 1 (lower is better)
Translates to: RTLTGLRGTHGILSR*EERLLGVSLRGRRV
Trigger: GACCCGTCGGCCCCGCAGGCTCACTCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTCCGTGGGTTCCCCTGAGCCCTGTGAGAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 90 bp CTCCAGGAGCAGAGCATGCAGGCCTGGCGCCGCTGTGGGCCCACCTaGTGTTTACCTGCTGGCATTTCCTCCTGCAACACACCCTCAGCC +
Preference number: 1 (lower is better)
Translates to: LQEQSMQAWRRCGPT*CLPAGISSCNTPSA
Trigger: GGCTGAGGGTGTGTTGCAGGAGGAAATGCCAGCAGGTAAACACCAGGTGGGCCCACAGCGGCGCCAGGCCTGCATGCTCTGCTCCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 90 bp GACGGGTCCCATGAGTTGGCCGCCCGGGGGCGAAGGAGAATCCAGTaGCTTTTCTGGGTTCACGTGCCCATGATCAGGGCAAGGGCCCTT +
Preference number: 1 (lower is better)
Translates to: DGSHELAARGRRRIQ*LFWVHVPMIRARAL
Trigger: AAGGGCCCTTGCCCTGATCATGGGCACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCGCCCCCGGGCGGCCAACTCATGGGACCCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 90 bp CATGCAGGCCTGGCGCCGCTGTGGGCCCACCTGGTGTTTACCTGCTaGCATTTCCTCCTGCAACACACCCTCAGCCTCAGCCAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: HAGLAPLWAHLVFTC*HFLLQHTLSLSQEA
Trigger: AGCTTCCTGGCTGAGGCTGAGGGTGTGTTGCAGGAGGAAATGCCAGCAGGTAAACACCAGGTGGGCCCACAGCGGCGCCAGGCCTGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 90 bp CATGAGTTGGCCGCCCGGGGGCGAAGGAGAATCCAGTGGCTTTTCTaGGTTCACGTGCCCATGATCAGGGCAAGGGCCCTTGAGAGAAGG +
Preference number: 1 (lower is better)
Translates to: HELAARGRRRIQWLF*VHVPMIRARALERR
Trigger: CCTTCTCTCAAGGGCCCTTGCCCTGATCATGGGCACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCGCCCCCGGGCGGCCAACTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 90 bp TCCCCTTCTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTaGTCTCCAGGGGTCCTGGCAGCTGGCTTGTTGCTGCTAGGAGCA +
Preference number: 1 (lower is better)
Translates to: SPSGLSYLPLQCGVC*SPGVLAAGLLLLGA
Trigger: TGCTCCTAGCAGCAACAAGCCAGCTGCCAGGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 90 bp AGGGCAAGGGCCCTTGAGAGAAGGCCCCTGCTGAGGTACACATGGTaGGAAGAGGCCTACCAGTCACCTCGATTCCCTAAGCCTCCACTC +
Preference number: 1 (lower is better)
Translates to: RARALERRPLLRYTW*EEAYQSPRFPKPPL
Trigger: GAGTGGAGGCTTAGGGAATCGAGGTGACTGGTAGGCCTCTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 90 bp GTGGCTTTTCTGGGTTCACGTGCCCATGATCAGGGCAAGGGCCCTTaGGAGAAGGCCCCTGCTGAGGTACACATGGTGGGAAGAGGCCTA +
Preference number: 1 (lower is better)
Translates to: VAFLGSRAHDQGKGP*EKAPAEVHMVGRGL
Trigger: TAGGCCTCTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCTGATCATGGGCACGTGAACCCAGAAAAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 90 bp ATCAGGGCAAGGGCCCTTGAGAGAAGGCCCCTGCTGAGGTACACATaGTGGGAAGAGGCCTACCAGTCACCTCGATTCCCTAAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: IRARALERRPLLRYT*WEEAYQSPRFPKPP
Trigger: TGGAGGCTTAGGGAATCGAGGTGACTGGTAGGCCTCTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 90 bp CTGGCATTTCCTCCTGCAACACACCCTCAGCCTCAGCCAGGAAGCTaGGTTGAAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGG +
Preference number: 1 (lower is better)
Translates to: LAFPPATHPQPQPGS*VEVKMAGSGIGTVG
Trigger: CCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTCAACTCAGCTTCCTGGCTGAGGCTGAGGGTGTGTTGCAGGAGGAAATGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR GCA 90 bp GTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCT +
Preference number: 1 (lower is better)
Translates to: VTTMDCQISRWPRRA*LMRAAFSFCLRAMP
Trigger: AGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp ACTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGAT +
Preference number: 1 (lower is better)
Translates to: TEGQRREGRGVSQPF*PLLGCADCHSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp GTCCTGGCAGCTGGCTTGTTGCTGCTAGGAGCATCTCTCTACAGGTaGCCTTCCATGCAAACCTACATCTGGGACCACTGTCCTTCCTCA +
Preference number: 1 (lower is better)
Translates to: VLAAGLLLLGASLYR*PSMQTYIWDHCPSS
Trigger: TGAGGAAGGACAGTGGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGTAGAGAGATGCTCCTAGCAGCAACAAGCCAGCTGCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR TCA 90 bp ATTTCCTCCTGCAACACACCCTCAGCCTCAGCCAGGAAGCTGAGTTaGAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGC +
Preference number: 1 (lower is better)
Translates to: ISSCNTPSASARKLS*SEDGWIGHWHSRVC
Trigger: GCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTCAACTCAGCTTCCTGGCTGAGGCTGAGGGTGTGTTGCAGGAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR GCA 90 bp ACTTGCGTTCATGATTCAATTACTCAGGCTCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTC +
Preference number: 1 (lower is better)
Translates to: TCVHDSITQALSLCS*PLLCDLASLDPSSV
Trigger: GACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAGAGCCTGAGTAATTGAATCATGAACGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR GCA 90 bp AGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCA +
Preference number: 1 (lower is better)
Translates to: RGQGRVSTLLATSRL*RLPLLLLRWTVRSA
Trigger: TGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp GCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATTCAATTACTCAGGCTCTGTCTCTCT +
Preference number: 1 (lower is better)
Translates to: AAPCISRCHLPHSPQ*ALAFMIQLLRLCLS
Trigger: AGAGAGACAGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp CAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGC +
Preference number: 1 (lower is better)
Translates to: QTATLVTTMDCQISR*PRRACLMRAAFSFC
Trigger: GCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR TCA 90 bp CCCTTGGGCCTGCCTCCAGCTAGATGCTGCAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGATCTGAGCTGGTCGTCACAGGTAGT +
Preference number: 1 (lower is better)
Translates to: PLGLPPARCCKSVLS*ESKQRRSELVVTGS
Trigger: ACTACCTGTGACGACCAGCTCAGATCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTTGCAGCATCTAGCTGGAGGCAGGCCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp TCCCTGGGGTCCCAATCTCTAGAACCCCAAGACTGGTCCACGCCCTaGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTT +
Preference number: 1 (lower is better)
Translates to: SLGSQSLEPQDWSTP*VRTDRGLPIPLKTL
Trigger: AAGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGACCAGTCTTGGGGTTCTAGAGATTGGGACCCCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR GCA 90 bp CCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTaGATGCATGAAGAAACAGGCACAGAGAAGCCAAATGACTTTCCC +
Preference number: 1 (lower is better)
Translates to: PCHACEVVGTYWNPH*MHEETGTEKPNDFP
Trigger: GGGAAAGTCATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTaGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCA +
Preference number: 1 (lower is better)
Translates to: FLLPPCHACEVVGTY*NPHCMHEETGTEKP
Trigger: TGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 90 bp AGTGACTTGTCTTACACACAGCTGACAGGTGGCAGAGCTGGGATTTaGACCAGGGTGCTCCCCAAACATGTTCTTAACCACTACATGTAC +
Preference number: 1 (lower is better)
Translates to: SDLSYTQLTGGRAGI*TRVLPKHVLNHYMY
Trigger: GTACATGTAGTGGTTAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCCCAGCTCTGCCACCTGTCAGCTGTGTGTAAGACAAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGTCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCACAGACCCCGCTCGCTaGAAAGGGCCGCGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPATDPAR*KGPRPS
Trigger: GCTTGGGCGCGGCCCTTTCCAGCGAGCGGGGTCTGT...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCGGCGCTTCCCCCACCTaGGGCTTCCCGGGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPGASPT*GFPGGS
Trigger: GGACCCTCCCGGGAAGCCCCAGGTGGGGGAAGCGCC...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR TCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTAGCGCCTTCTGGGAGTaGGCCTGCGGGGCCGACGGG +
Preference number: 2 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGSAFWE*ACGADG
Trigger: CCCGTCGGCCCCGCAGGCTCACTCCCAGAAGGCGCT...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAACCCACGAGGCCACCTaGGGGGCCGGGAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PASRRVLTLQLVGFMGQETHEAT*GAGREE
Trigger: CTCTTCCCTCCCGGCCCCGCAGGTGGCCTCGTGGGT...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 2 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGSSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAATCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTTCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 2 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCCAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: KERGQGRVSTLLATSRLCQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCCAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: LRGKGERAGACLNPSGHFWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTCAGAGTCACGGGGCTTaGGGGGCGAGCGCCGGAGCA +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPQSHGA*GASAGA
Trigger: TGCTCCGGCGCTCGCCCCGCAAGCCCCGTGACTCTG...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: LRGKGERAGACLNPSGHFCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTACGGGTCCCATGAGTTaGCCGCCCGGGGGCGAAGGA +
Preference number: 2 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTTGPMS*PPGGEG
Trigger: TCCTTCGCCCCCGGGCGGCCAACTCATGGGACCCGT...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR TCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGACAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGGGTTCACGTGCCCATaGTCAGGGCAAGGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQGFTCP*SGQGPL
Trigger: CAAGGGCCCTTGCCCTGATCATGGGCACGTGAACCC...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 2 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCGGTCAACGCTTAGGCTaGACCTGCCACGTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVGQRLG*TCHVPG
Trigger: GCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACC...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR TCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCTCTCCTACAGGGGTCTaGAGCCCCTGCCTCAGAACC +
Preference number: 2 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVSPTGV*SPCLRT
Trigger: GGTTCTGAGGCAGGGGCTTCAGACCCCTGTAGGAGA...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: LRGKGERAGACLNPSGHFAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 2 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: APCSVTWPLWTPVPSVSDHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...ATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: LRGKGERAGACLNPSGHFSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGACCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCAGGGCAAGGGCCCTTaGGAGAAGGCCCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: VVQTATLVTTMDCQISRWQGKGP*EKAPAE
Trigger: CTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCTG...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGATGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp GTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCAGCTAGATGCTGCTACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: VPAVSLLTPLGLPPARCCYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...GCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GAAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTAGACCCCTCCCCTTCTaGCCTCAGCTACCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: EVKMAGSGIGTVGFAVPPRPLPF*PQLPAS
Trigger: AGAGGCAGGTAGCTGAGGCCAGAAGGGGAGGGGTCT...AGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 90 bp TGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGGGCTaGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCC +
Preference number: 2 (lower is better)
Translates to: CYYDGLSDQQVAQEG*LDAGCFFLLPPCHA
Trigger: GGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGCAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAACCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 2 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 2 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 2 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CAA 90 bp GTTCATGATTCAATTACTCAGGCTCTGTCTCTCTGTTCCTGCCCCTaGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAG +
Preference number: 2 (lower is better)
Translates to: VHDSITQALSLCSCP*LCDLASLDPSSVRE
Trigger: CTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAGAGCCTGAGTAATTGAATCATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR CAA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTaGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VSTLLATSRLCRLPL*LLRWTVRSAGGPGG
Trigger: CCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGCCTCCACTCCCAAATaGGGAAGGGGCGCTTCCCCC +
Preference number: 2 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETASTPK*GRGASP
Trigger: GGGGGAAGCGCCCCTTCCTCATTTGGGAGTGGAGGC...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 2 (lower is better)
Translates to: LRGKGERAGACLNPSGHFSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 2 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TGGACAGTGCAGATTGCAGAAGTCCGCGGACGAGAAGAGCCGCAGCACGTTGACGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: WTVQIAEVRGREEPQHVDDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...GTCAACGTGCTGCGGCTCTTCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGTTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGTTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 2 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 2 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 2 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 2 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAAGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CAA 90 bp GAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCA +
Preference number: 2 (lower is better)
Translates to: ERGQGRVSTLLATSR*CRLPLLLLRWTVRS
Trigger: TGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGCCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp ATGACTTTCCCAAGGTCACACAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: MTFPRSHSLKGQPAVPAVDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...AACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTGGGAAAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: FERILPGALHVWSPTWSGDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp GTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCAGCTAGATGCTGCGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: VPAVSLLTPLGLPPARCCATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...GCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAATACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGGAATACTCTCTAGGTaGGAGGAGCGCCTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGGILSR*EERLLG
Trigger: TCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTCC...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 2 (lower is better)
Translates to: CADCHSCYYDGLSDQQVALDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCGTACAGCCCAGTAGGTaGGTTTGGAATTCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVVQPSR*VWNSGF
Trigger: GAACCCAGAATTCCAAACGCACCTACTGGGCTGTAC...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 2 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAACTGCTGAGGTACACATaGTGGGAAGAGGCCTACCAG +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKLLRYT*WEEAYQ
Trigger: CTGGTAGGCCTCTTCCCACCATGTGTACCTCAGCAG...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp CTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTGATCTCCAGGGGTCCATCTGCTCCTCCTCATaGACTGATGACAATGATGGT +
Preference number: 2 (lower is better)
Translates to: LASATCLCNVECADLQGSICSSS*TDDNDG
Trigger: ACCATCATTGTCATCAGTCCATGAGGAGGAGCAGAT...GGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR TCA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 2 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCGAAGGAGAATCCAGTaGCTTTTCTGGGTTCACGTG +
Preference number: 2 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRRRRIQ*LFWVHV
Trigger: CACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR TCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCAGCTAGATGCTGCAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: VPAVSLLTPLGLPPARCCKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...GCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGAGAGAAGGCCCCTGCTaGGGTACACATGGTGGGAAG +
Preference number: 2 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMREGPC*GTHGGK
Trigger: CTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCT...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR GCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAATTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTTTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGATCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 2 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 2 (lower is better)
Translates to: VICLSCRSPSVRLRGKGESSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGACACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 2 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAACTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 2 (lower is better)
Translates to: PASRRVLTLQLVGFMGQELGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 2 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TCTACAGGTGGCCTTCCATGCAAACCTACATCTGGGACCACTGTCCTTCCTCACGGATTTGGACCAGGGTaGTCCCCAAACATGTTCTTA +
Preference number: 2 (lower is better)
Translates to: STGGLPCKPTSGTTVLPHGFGPG*SPNMFL
Trigger: TAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCC...GTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 2 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAATCCAGTGGCTTTTCTaGGTTCACGTGCCCATGATC +
Preference number: 2 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLIQWLF*VHVPMI
Trigger: GATCATGGGCACGTGAACCCAGAAAAGCCACTGGAT...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CCA 90 bp TCTTTCCAGTTTCTAGGTCCCAAGGTAGAAAATCCAGCTTCCTGGCAAGCTTTCGGCAGAGCTGGGATTTaGACCAGGGTGCTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: SFQFLGPKVENPASWQAFGRAGI*TRVLPK
Trigger: TTTGGGGAGCACCCTGGTCCAAATCCCAGCTCTGCC...GAAAGCTTGCCAGGAAGCTGGATTTTCTACCTTGGGACCTAGAAACTGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCAGGTCCCAGTCTAGGCTaGTTCAATCTGCATTTTATC +
Preference number: 2 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSGPSLG*FNLHFI
Trigger: GATAAAATGCAGATTGAACCAGCCTAGACTGGGACC...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp GAAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTGAAAATCCAGCTTCCTaGCAAGCTTTCTGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: EVKMAGSGIGTVGFAVPPENPAS*QAFCQA
Trigger: AGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTC...AGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR TCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 2 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp TCTACAGGTGGCCTTCCATGCAAACCTACATCTGGGACCACTGTCCTTCCTCACCACAGAGAACTGAAGTaGCTTGTCTTACACACAGCT +
Preference number: 2 (lower is better)
Translates to: STGGLPCKPTSGTTVLPHHRELK*LVLHTA
Trigger: AGCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTG...GTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACACTGAGGTACACATGGTaGGAAGAGGCCTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETLRYTW*EEAYQS
Trigger: TGACTGGTAGGCCTCTTCCCACCATGTGTACCTCAG...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR TCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GAGCTGGGATTTGGACCAGGGTGCTCCCCAAACATGTTCTTAACCACTACATGTTTCTGGGTTCTGAAATaGAGTGTTCCCCCACTAGGA +
Preference number: 2 (lower is better)
Translates to: ELGFGPGCSPNMFLTTTCFWVLK*SVPPLG
Trigger: TCCTAGTGGGGGAACACTTCATTTCAGAACCCAGAA...ACATGTAGTGGTTAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCCCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR GCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGATCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 2 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTATCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 2 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGTTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 2 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTTTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 2 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAAGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGGGGTTTCTTGGATTTaGAGGTCTGAGCCTTTGGTC +
Preference number: 2 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFGVSWI*RSEPLV
Trigger: GACCAAAGGCTCAGACCTGCAAATCCAAGAAACCCC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR GCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: SPLLPPFERILPGALHVWDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR GCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 2 (lower is better)
Translates to: CADCHSCYYDGLSDQQVANNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGCTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMLLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 2 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR TCA 90 bp ACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTTTCTGCTCCAAGATTCTTGTGGAATTCTGGGTTCTaGAATGAAGTGTTCCCCCAC +
Preference number: 2 (lower is better)
Translates to: TDRGLPIPLKTLSAPRFLWNSGF*NEVFPH
Trigger: GTGGGGGAACACTTCATTTCAGAACCCAGAATTCCA...CAAGAATCTTGGAGCAGAAAGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR GCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp CAGAGGGAACATGAGCAGCGCTCCGAGCAGCGAGCCCAGCTGCACCGCCGCCCCGCAGAGTCACGGGGCTaGCGGGGCGAGCGCCGGAGC +
Preference number: 3 (lower is better)
Translates to: QREHEQRSEQRAQLHRRPAESRG*RGERRS
Trigger: GCTCCGGCGCTCGCCCCGCAAGCCCCGTGACTCTGC...GGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCCTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 72 bp GGGAACATGAGCAGCGCTCCGAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCACAAGAGGGCGCTGCGG +
Preference number: 3 (lower is better)
Translates to: GNMSSAPSSEPS*TAAPHHKRALR
Trigger: CCGCAGCGCCCTCTTGTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 72 bp GGGGCTTCCCGGGAGGGTCCCACAGACCCCGCTCGCTaGAAAGGGCCGCGCCCAAGCTCTCCCAGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GASREGPTDPAR*KGPRPSSPRPW
Trigger: CCAAGGCCTGGGAGAGCTTGGGCGCGGCCCTTTCCAGCGAGCGGGGTCTGTGGGACCCTCCCGGGAAGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 72 bp CTGAGGCAGCCGCTGAAAAGCACCCACGAGGCCACCTaGGGGGCCGGGAGGGAAGAGGTGCAGAGTCACGGG +
Preference number: 3 (lower is better)
Translates to: LRQPLKSTHEAT*GAGREEVQSHG
Trigger: CCCGTGACTCTGCACCTCTTCCCTCCCGGCCCCGCAGGTGGCCTCGTGGGTGCTTTTCAGCGGCTGCCTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 72 bp GGGAGTGAGCCTGCGGGGCCGACGGGTCCCATGAGTTaGCCGCCCGGGGGCGAAGGAGAATCCAGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: GSEPAGPTGPMS*PPGGEGESSGF
Trigger: AAAGCCACTGGATTCTCCTTCGCCCCCGGGCGGCCAACTCATGGGACCCGTCGGCCCCGCAGGCTCACTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 72 bp GGGGTCGGCGGCCTGCCTAGGCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGAAGAGCCGCAGCACGT +
Preference number: 3 (lower is better)
Translates to: GVGGLPRLDSAD*RSPRTRRAAAR
Trigger: ACGTGCTGCGGCTCTTCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 72 bp GAATACTCTCTAGGTGCGAGGAGCGCCTTCTGGGAGTaGGCCTGCGGGGCCGACGGGTCCCATGAGTTGGCC +
Preference number: 3 (lower is better)
Translates to: EYSLGARSAFWE*ACGADGSHELA
Trigger: GGCCAACTCATGGGACCCGTCGGCCCCGCAGGCTCACTCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 72 bp ACAGGGCTCAGGGGAACCCACGGAATACTCTCTAGGTaGGAGGAGCGCCTTCTGGGAGTGAGCCTGCGGGGC +
Preference number: 3 (lower is better)
Translates to: TGLRGTHGILSR*EERLLGVSLRG
Trigger: GCCCCGCAGGCTCACTCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTCCGTGGGTTCCCCTGAGCCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 72 bp CCTCCAGGAGCAGAGCATGCAGGCCTGGCGCCGCTGTaGGCCCACCTGGTGTTTACCTGCTGGCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: PPGAEHAGLAPL*AHLVFTCWHFL
Trigger: GAGGAAATGCCAGCAGGTAAACACCAGGTGGGCCCACAGCGGCGCCAGGCCTGCATGCTCTGCTCCTGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp GCCGCCCGGGGGCGAAGGAGAATCCAGTGGCTTTTCTaGGTTCACGTGCCCATGATCAGGGCAAGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: AARGRRRIQWLF*VHVPMIRARAL
Trigger: AAGGGCCCTTGCCCTGATCATGGGCACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCGCCCCCGGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR CCA 72 bp CTGGCGCCGCTGTGGGCCCACCTGGTGTTTACCTGCTaGCATTTCCTCCTGCAACACACCCTCAGCCTCAGC +
Preference number: 3 (lower is better)
Translates to: LAPLWAHLVFTC*HFLLQHTLSLS
Trigger: GCTGAGGCTGAGGGTGTGTTGCAGGAGGAAATGCCAGCAGGTAAACACCAGGTGGGCCCACAGCGGCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp GCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 3 (lower is better)
Translates to: APCSVTWPLWTPVPSVSDLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...ATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
3UTR TCA 72 bp CTGGGTTCACGTGCCCATGATCAGGGCAAGGGCCCTTaGGAGAAGGCCCCTGCTGAGGTACACATGGTGGGA +
Preference number: 3 (lower is better)
Translates to: LGSRAHDQGKGP*EKAPAEVHMVG
Trigger: TCCCACCATGTGTACCTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCTGATCATGGGCACGTGAACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR GCA 72 bp GAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTaGTGTGCCTCCTCAGGAGACCCCTCCCCTTCTGGC +
Preference number: 3 (lower is better)
Translates to: EDGWIGHWHSRV*CASSGDPSPSG
Trigger: GCCAGAAGGGGAGGGGTCTCCTGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp CATGAGTTGGCCGCCCGGGGGCGAAGGAGAATCCAGTaGCTTTTCTGGGTTCACGTGCCCATGATCAGGGCA +
Preference number: 3 (lower is better)
Translates to: HELAARGRRRIQ*LFWVHVPMIRA
Trigger: TGCCCTGATCATGGGCACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCGCCCCCGGGCGGCCAACTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CAA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 3 (lower is better)
Translates to: LRGKGERAGACLNPSGHFLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR GCA 72 bp TCGCCTCTGAGCCTCCAAATCGGAGTTTTGCAAGGCTaGATGACCTCCAGGAGCAGAGCATGCAGGCCTGGC +
Preference number: 3 (lower is better)
Translates to: SPLSLQIGVLQG*MTSRSRACRPG
Trigger: GCCAGGCCTGCATGCTCTGCTCCTGGAGGTCATGCAGCCTTGCAAAACTCCGATTTGGAGGCTCAGAGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATCCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 3 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR TCA 72 bp CCTCCTGCAACACACCCTCAGCCTCAGCCAGGAAGCTaGGTTGAAGTGAAGATGGCTGGATCGGGCATTGGC +
Preference number: 3 (lower is better)
Translates to: PPATHPQPQPGS*VEVKMAGSGIG
Trigger: GCCAATGCCCGATCCAGCCATCTTCACTTCAACTCAGCTTCCTGGCTGAGGCTGAGGGTGTGTTGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp GCCCTTGAGAGAAGGCCCCTGCTGAGGTACACATGGTaGGAAGAGGCCTACCAGTCACCTCGATTCCCTAAG +
Preference number: 3 (lower is better)
Translates to: ALERRPLLRYTW*EEAYQSPRFPK
Trigger: CTTAGGGAATCGAGGTGACTGGTAGGCCTCTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCTCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR-3UTR CAA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: FERILPGALHVWSPTWSGGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp TGCTCCTCCTCATGGACTGATGACAATGATGGTCAACGCTTAGGCTGGACCTGCTGGCAGAGCTGGGATTaGGACCAGGGTGCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: CSSSWTDDNDGQRLGWTCWQSWD*DQGAPQ
Trigger: TTGGGGAGCACCCTGGTCCAAATCCCAGCTCTGCCA...GCAGGTCCAGCCTAAGCGTTGACCATCATTGTCATCAGTCCATGAGGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCAGTCCTGGCAGCTGGCTaGTTGCTGCTAGGAGCATCT +
Preference number: 3 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSVLAAG*LLLGAS
Trigger: AGATGCTCCTAGCAGCAACAAGCCAGCTGCCAGGAC...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR GCA 72 bp ATGGACTGTCAGATCAGCAGGTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGT +
Preference number: 3 (lower is better)
Translates to: MDCQISRWPRRA*LMRAAFSFCLR
Trigger: ACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp CAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGT +
Preference number: 3 (lower is better)
Translates to: QRREGRGVSQPF*PLLGCADCHSC
Trigger: ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp TCATGGACTGATGACAATGATGGTCAACGCTTAGGCTaGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCT +
Preference number: 3 (lower is better)
Translates to: SWTDDNDGQRLG*TCHVPGTAPRA
Trigger: AGCTCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATTGTCATCAGTCCATGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp TTGTCCCTGGGGTCCCAATCTCTAGAACCCCAAGACTaGTCCACGCCCTGGGTAAGAACAGACAGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: LSLGSQSLEPQD*STPWVRTDRGL
Trigger: CAGACCTCTGTCTGTTCTTACCCAGGGCGTGGACCAGTCTTGGGGTTCTAGAGATTGGGACCCCAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 3 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 3 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
3UTR TCA 72 bp TCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTaGAGCCCCTGCCTCAGAACCGTCTGGTTTCCTTAC +
Preference number: 3 (lower is better)
Translates to: SRSQGGSSPTGV*SPCLRTVWFPY
Trigger: GTAAGGAAACCAGACGGTTCTGAGGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp ACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: TLVTTMDCQISR*PRRACLMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp TCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATaGACTGTCAGATCAGCAGGTGGCCCAGGAGGGCTT +
Preference number: 3 (lower is better)
Translates to: SRLCRLPLLLLR*TVRSAGGPGGL
Trigger: AAGCCCTCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp TCTCTCTACAGGTGGCCTTCCATGCAAACCTACATCTaGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCT +
Preference number: 3 (lower is better)
Translates to: SLYRWPSMQTYI*DHCPSSQVLVP
Trigger: AGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGTAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CCA 72 bp GCTGGCTTGTTGCTGCTAGGAGCATCTCTCTACAGGTaGCCTTCCATGCAAACCTACATCTGGGACCACTGT +
Preference number: 3 (lower is better)
Translates to: AGLLLLGASLYR*PSMQTYIWDHC
Trigger: ACAGTGGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGTAGAGAGATGCTCCTAGCAGCAACAAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCATCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 3 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR TCA 72 bp AGCAAAGGAGATCTGAGCTGGTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGAGCCGCACCTTGCATT +
Preference number: 3 (lower is better)
Translates to: SKGDLSWSSQVV*HRVGDRAAPCI
Trigger: AATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACACTACCTGTGACGACCAGCTCAGATCTCCTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp CCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTaGAATCCCCACTGCATGCATGAAGAAACAGGCACA +
Preference number: 3 (lower is better)
Translates to: PPCHACEVVGTY*NPHCMHEETGT
Trigger: TGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp TCCCAATCTCTAGAACCCCAAGACTGGTCCACGCCCTaGGTAAGAACAGACAGAGGTCTGCCTATACCCTTA +
Preference number: 3 (lower is better)
Translates to: SQSLEPQDWSTP*VRTDRGLPIPL
Trigger: TAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGACCAGTCTTGGGGTTCTAGAGATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR-3UTR CAA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAATGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 3 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 3 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGTCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 3 (lower is better)
Translates to: FERILPGALHVWSPTWSGSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCTCTGTTGCCTCCATTaGAGAGAATACTTCCAGGGG +
Preference number: 3 (lower is better)
Translates to: CADCHSCYYDGLSDQQVALCCLH*REYFQG
Trigger: CCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 3 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR GCA 72 bp TTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTTGGTACTTACTGGAAT +
Preference number: 3 (lower is better)
Translates to: LLDAGCFFLLPP*HACEVVGTYWN
Trigger: ATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR-3UTR CAA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 3 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR GCA 72 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTaGATGCATGAAGAAACAGGCACAGAGAAGCCAAAT +
Preference number: 3 (lower is better)
Translates to: ACEVVGTYWNPH*MHEETGTEKPN
Trigger: ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR GCA 72 bp TCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGG +
Preference number: 3 (lower is better)
Translates to: SESQDAQDSIVI*LSCRSPSVRLR
Trigger: CCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
3UTR CCA 72 bp CAGTTTCTAGGTCCCAAGGTAGAAAATCCAGCTTCCTaGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTG +
Preference number: 3 (lower is better)
Translates to: QFLGPKVENPAS*QAFCQALLSSL
Trigger: CAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTCTACCTTGGGACCTAGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR TCA 72 bp CCTGCCTCAGAACCGTCTGGTTTCCTTACTAAAAATTaGAATCCCAGGTCCCAGTCTAGGCTGGTTCAATCT +
Preference number: 3 (lower is better)
Translates to: PASEPSGFLTKN*NPRSQSRLVQS
Trigger: AGATTGAACCAGCCTAGACTGGGACCTGGGATTTCAATTTTTAGTAAGGAAACCAGACGGTTCTGAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CAGAGGGAACATGAGCAGCGCTCCGAGCAGCGAGCCCAGCTGCACCGCCGCCCCGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: QREHEQRSEQRAQLHRRPGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...GGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp CCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGGAGAGGGCGCTGCGGCTaGGGTCGCGCAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: PLLCDLASLDPSSVRERWRGRCG*GRAGPR
Trigger: GCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCT...CCATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCTCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCAGAGGGCGCTGCGGCTaGGGTCGCGCAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPARGRCG*GRAGPR
Trigger: GCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCT...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPSSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCACGCGGGGTCGGCGGCCTaGCTAGGCTGGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EPHLAFPGAIFPTVPSGHAGSAA*LGWTVQ
Trigger: CTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCCGC...GTGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCATCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RAAPCISRCHLPHSPQWASVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...TGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CAGAGGGAACATGAGCAGCGCTCCGAGCAGCGAGCCCAGCTGCACCGCCGCCCCTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QREHEQRSEQRAQLHRRPCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...GGGGCGGCGGTGCAGCTGGGCTCGCTGCTCGGAGCGCTGCTCATGTTCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp CACCACAAGAGGGCGCTGCGGCTGAGGTCGCGCAGGACCACGCCCAGCATCACCTCCCAGCACCTGGGTTaGCGCTGGAGGACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: HHKRALRLRSRRTTPSITSQHLG*RWRTKN
Trigger: GTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGA...GGTGATGCTGGGCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCCCACCAGGGTATAGATaGAGGCCAGGTGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASPPGYR*RPGAPG
Trigger: GCCCGGCGCACCTGGCCTTCATCTATACCCTGGTGG...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: AQEGLLDAGCFFLLPPCHSSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...ATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACGCGGGGTCGGCGGCCTaGCTAGGCTGGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHAGSAA*LGWTVQ
Trigger: CTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCCGC...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CACCACAAGAGGGCGCTGCGGCTGAGGTCGCGCAGGACCACGCCCAGCATCACCGGCTCTCCTGGGATCTaGACTGGATCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HHKRALRLRSRRTTPSITGSPGI*TGSSAA
Trigger: TGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCC...GGTGATGCTGGGCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCAGCCGCTGAAAAGCACCCACGAGGCCACCTGCGGGGCCGGGAGGGAAGAGGTACAGGAAGGGGTGTGTaGGGTACTACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: AAAEKHPRGHLRGREGRGTGRGV*GTTSLH
Trigger: GTGGAGGGACGTAGTACCCCACACACCCCTTCCTGT...ACCTCTTCCCTCCCGGCCCCGCAGGTGGCCTCGTGGGTGCTTTTCAGCGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGCAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGCAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGAGCGCCTTCTGGGAGTaGGCCTGCGGGGCCGACGGG +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQSAFWE*ACGADG
Trigger: CCCGTCGGCCCCGCAGGCTCACTCCCAGAAGGCGCT...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR GCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDSSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCGCGGGGTCGGCGGCCTaGCTAGGCTGGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLAGSAA*LGWTVQ
Trigger: CTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCCGC...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCAGCCGCTGAAAAGCACCCACGAGGCCACCTGCGGGGCCGGGAGGGAAGAGGTTACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: AAAEKHPRGHLRGREGRGYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...ACCTCTTCCCTCCCGGCCCCGCAGGTGGCCTCGTGGGTGCTTTTCAGCGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGTCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGGCGCTTCCCCCACCTaGGGCTTCCCGGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVGASPT*GFPGGS
Trigger: GGACCCTCCCGGGAAGCCCCAGGTGGGGGAAGCGCC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp CCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGGCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PLLCDLASLDPSSVRERWRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...CCATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTAGAGGGCGCTGCGGCTaGGGTCGCGCAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCRGRCG*GRAGPR
Trigger: GCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCT...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCGCACCACAAGAGGGCGCTGCGGCTGAGGTCGCGCAGGACCACGCCCAGCATTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: PAPQEGAAAEVAQDHAQHSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...ATGCTGGGCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCTTGTGGTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCGGGTTCACGTGCCCATaGTCAGGGCAAGGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPAGFTCP*SGQGPL
Trigger: CAAGGGCCCTTGCCCTGATCATGGGCACGTGAACCC...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCATGATCTCGGCTCAGTaGCCCTCTGCCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASMISAQ*PSASWA
Trigger: AGCCCAGGAGGCAGAGGGTCACTGAGCCGAGATCAT...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR GCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCCTGGACTGGATCCTCTaGAGCAAGCGGCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFLDWIL*SKRPVR
Trigger: CCGGACAGGCCGCTTGCTGCAGAGGATCCAGTCCAG...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPQVGQG*FHSGEG
Trigger: GCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTG...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCACCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EPHLAFPGAIFPTVPSGHQVGQG*FHSGEG
Trigger: GCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTG...GTGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATACCCCTGGCCCTGGCTaGTGTCCACCGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AQEGLLDAGCFFLLPPCHTPGPG*CPPCLQ
Trigger: CTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGT...ATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGACCCCTGGCCCTGGCTaGTGTCCACCGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGTPGPG*CPPCLQ
Trigger: CTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGT...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGCGGGGTCGGCGGCCTaGCTAGGCTGGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVAGSAA*LGWTVQ
Trigger: CTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCCGC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPAVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGCGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPRARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCAGAGGGCGCTGCGGCTaGGGTCGCGCAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFRGRCG*GRAGPR
Trigger: GCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCT...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACCAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGCCTCCACTCCCAAATaGGGAAGGGGCGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSASTPK*GRGASP
Trigger: GGGGGAAGCGCCCCTTCCTCATTTGGGAGTGGAGGC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR GCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGACCCCTGGCCCTGGCTaGTGTCCACCGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLTPGPG*CPPCLQ
Trigger: CTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGT...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVASSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTAGCAGCGAGCCCAGCTaGACCGCCGCCCCGCACCAC +
Preference number: 4 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPSSEPS*TAAPHH
Trigger: GTGGTGCGGGGCGGCGGTGCAGCTGGGCTCGCTGCT...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTGATCTCCAGGGGTCCAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LASATCLCNVECADLQGSKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...GGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCTTTATAGAAGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TLRLDLPRARHRSKSFIEVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...TTCTATAAAGCTCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp AGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCACGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: RAAPCISRCHLPHSPQWARGRME*RVTWSL
Trigger: CAATGACCAGGTCACCCTCCACTCCATCCGGCCGCG...TGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACAGATACCCCTGGCCCTaGCTGCTGTCCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHRYPWP*LLSTVP
Trigger: AGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCT...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCTCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: APCSVTWPLWTPVPSVSDPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...ATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGACGGGTCCCATGAGTTaGCCGCCCGGGGGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: FERILPGALHVWSPTWSGTGPMS*PPGGEG
Trigger: TCCTTCGCCCCCGGGCGGCCAACTCATGGGACCCGT...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCACAGAGCATGCAGGCCTaGCGCCGCTGTGGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSQSMQA*RRCGPT
Trigger: GGTGGGCCCACAGCGGCGCCAGGCCTGCATGCTCTG...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAAGTGATGGAGCAGGGTaGCCAGGAGGGGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGSDGAG*PGGARC
Trigger: ACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCTGGGCAGCCGGCTCATaGACGGCAGGAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPWAAGS*TAGRSL
Trigger: CAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCA...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGTGGGCAGCCGGCTCATaGACGGCAGGAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGWAAGS*TAGRSL
Trigger: CAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCA...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: KGQPAVPAVSLLTPLGLPRARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...AGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCACCCACGAGGCCACAATaGGGACTTCCCCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSPTRPQ*GLPHPS
Trigger: ACTGGGGTGGGGAAGTCCTCATTGTGGCCTCGTGGG...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGACAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATCAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: AQEGLLDAGCFFLLPPCHQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...ATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCCCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPAPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCTGGACTGGATCCTCTaGAGCAAGCGGCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGLDWIL*SKRPVR
Trigger: CCGGACAGGCCGCTTGCTGCAGAGGATCCAGTCCAG...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTGCTGTCCACCGTGCCTaGAGGGCCCAAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KGQPAVPAVSLLTPLGLPAVHRA*RAQVIL
Trigger: GAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGC...AGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSGCCPP*LQGPSH
Trigger: ATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCGCGGGGTCGGCGGCCTaGCTAGGCTGGACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPAGSAA*LGWTVQ
Trigger: CTGCACTGTCCAGCCTAGGCAGGCCGCCGACCCCGC...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGC +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPACQSPS*VQGLVR
Trigger: GCGTACCAAGCCCTGTACCCACGAGGGAGACTGACA...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCAAGCCTCCCAGCACCTaGGTTGACGCTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFKPPST*VDAGGQ
Trigger: TTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTT...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCGAGTGGAGGGTGACCTaGTCATTGAGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASEWRVT*SLRRSS
Trigger: GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTC...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGAGTGGAGGGTGACCTaGTCATTGAGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: APCSVTWPLWTPVPSVSDEWRVT*SLRRSS
Trigger: GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTC...ATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAAGATACCCCTGGCCCTaGCTGCTGTCCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGRYPWP*LLSTVP
Trigger: AGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCT...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCCAGGTGGTAGGCAACTaGCCCATAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFQVVGN*PIGQAG
Trigger: TCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTG...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCACCAGGTGGTAGGCAACTaGCCCATAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EPHLAFPGAIFPTVPSGHQVVGN*PIGQAG
Trigger: TCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTG...GTGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTGATCTCCAGGGGTCCACAGGCAGGCCAGCGTaGATACGAGGCTGTAGGACC +
Preference number: 4 (lower is better)
Translates to: LASATCLCNVECADLQGSTGRPA*IRGCRT
Trigger: GGTCCTACAGCCTCGTATCCACGCTGGCCTGCCTGT...GGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCCACCAGGGTATAGATaGAGGCCAGGTGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCPPGYR*RPGAPG
Trigger: GCCCGGCGCACCTGGCCTTCATCTATACCCTGGTGG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGCCCACGAGGCCACAATaGGGACTTCCCCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPPTRPQ*GLPHPS
Trigger: ACTGGGGTGGGGAAGTCCTCATTGTGGCCTCGTGGG...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAGAGGGCGCTGCGGCTaGGGTCGCGCAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: GTYWNPHCMHEETGTEKPRGRCG*GRAGPR
Trigger: GCGTGGTCCTGCGCGACCTCAGCCGCAGCGCCCTCT...TGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGCTGTCCACCGTGCCTaGAGGGCCCAAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSAVHRA*RAQVIL
Trigger: GAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ATGACTTTCCCAAGGTCACACAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: MTFPRSHSLKGQPAVPAVGCCPP*LQGPSH
Trigger: ATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCC...AACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTGGGAAAGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFLDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPALSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGCTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGCAGAGTCACGGGGCTTaGGGGGCGAGCGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVQSHGA*GASAGA
Trigger: TGCTCCGGCGCTCGCCCCGCAAGCCCCGTGACTCTG...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPAEGLS*DLDWIL
Trigger: GAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTCTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FERILPGALHVWSPTWSGKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACAAGCCTCCCAGCACCTaGGTTGACGCTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHKPPST*VDAGGQ
Trigger: TTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTT...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: FERILPGALHVWSPTWSGRGRME*RVTWSL
Trigger: CAATGACCAGGTCACCCTCCACTCCATCCGGCCGCG...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCAGGCTCATCACCGCCATaGCCATGTTGTAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: RAAPCISRCHLPHSPQWAGSSPP*PCCSPQ
Trigger: TTGGGGGCTACAACATGGCCATGGCGGTGATGAGCC...TGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTATCCGTCCGTGAGCGATaGGGGCGGGGTCGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLSVRER*GRGRRP
Trigger: AGGCCGCCGACCCCGCCCCCATCGCTCACGGACGGA...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGACAGGAGTGTCCGTTGTaGCCACGCCTCACCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGQECPL*PRLTQE
Trigger: TTCCTGGGTGAGGCGTGGCCACAACGGACACTCCTG...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCACAGACCCCGCTCGCTaGAAAGGGCCGCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFTDPAR*KGPRPS
Trigger: GCTTGGGCGCGGCCCTTTCCAGCGAGCGGGGTCTGT...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp CTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTGATCTCCAGGGGTCCGACAGGTGGCAGAGCTaGGATTTGGACCAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LASATCLCNVECADLQGSDRWQS*DLDQGA
Trigger: AGCACCCTGGTCCAAATCCCAGCTCTGCCACCTGTC...GGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGACAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGCGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVRARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTCCCAGCACCTGGGTTaGCGCTGGAGGACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLSQHLG*RWRTKN
Trigger: GTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGACCACCAGGGTATAGATaGAGGCCAGGTGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGPPGYR*RPGAPG
Trigger: GCCCGGCGCACCTGGCCTTCATCTATACCCTGGTGG...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATCCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQEGLLDAGCFFLLPPCHPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...ATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGGTCTGTTGCCTCCATTTaGGAGAATACTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLCDLASLDPSSVRERWSVASI*ENTSRG
Trigger: GCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGA...CCATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGTCTGGGAACTCCCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGSGNSL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGA...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAGGCCTACCAGTCACCTCGATTCCCTAAGCCTCCACTCCCAAATGAGGAAGGGGCTGTCCACCGTGCCTaGAGGGCCCAAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: EAYQSPRFPKPPLPNEEGAVHRA*RAQVIL
Trigger: GAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGC...CCCTTCCTCATTTGGGAGTGGAGGCTTAGGGAATCGAGGTGACTGGTAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR GCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHLDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCTTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACACTTCTTCCTTCTGCTaGTCCAGTTCCCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHTSSFC*SSSPAA
Trigger: AGCGGCTGGGGAACTGGACCAGCAGAAGGAAGAAGT...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000217254.11
CDS-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATCCTGGGATCTGGACTaGATCCTCTGCAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGSWDLD*ILCSKR
Trigger: CCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGA...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCGGCTCTCCTGGGATCTaGACTGGATCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCGSPGI*TGSSAA
Trigger: TGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCC...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVAEGLS*DLDWIL
Trigger: GAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCACTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATGATGGTCAACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGACTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: NDGQRLGWTCHVPGTAPRLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...TCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACGAGTGGAGGGTGACCTaGTCATTGAGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHEWRVT*SLRRSS
Trigger: GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTC...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTRGRME*RVTWSL
Trigger: CAATGACCAGGTCACCCTCCACTCCATCCGGCCGCG...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGGGCTCATCACCGCCATaGCCATGTTGTAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGGSSPP*PCCSPQ
Trigger: TTGGGGGCTACAACATGGCCATGGCGGTGATGAGCC...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCACAGGAAGGGGTGTGTaGGGTACTACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCTGRGV*GTTSLH
Trigger: GTGGAGGGACGTAGTACCCCACACACCCCTTCCTGT...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCAGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RAAPCISRCHLPHSPQWAVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...TGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTAGTGATGGAGCAGGGTaGCCAGGAGGGGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPSDGAG*PGGARC
Trigger: ACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCAGTGATGGAGCAGGGTaGCCAGGAGGGGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVASDGAG*PGGARC
Trigger: ACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: VVQTATLVTTMDCQISRWQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAACGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQERARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCACGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSRARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGGSRPS*WIGGGR
Trigger: TCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCC...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGGSRPS*WIGGGR
Trigger: TCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCC...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGCCACCAGGGTATAGATaGAGGCCAGGTGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWPPGYR*RPGAPG
Trigger: GCCCGGCGCACCTGGCCTTCATCTATACCCTGGTGG...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPAYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACAGGGCAAGGGCCCTTaGGAGAAGGCCCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGQGKGP*EKAPAE
Trigger: CTCAGCAGGGGCCTTCTCTCAAGGGCCCTTGCCCTG...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCCAATGTGGAGTGTGCTaGTCTCCAGGGGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVQCGVC*SPGVLA
Trigger: TGCCAGGACCCCTGGAGATCAGCACACTCCACATTG...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp TGCTCCTCCTCATGGACTGATGACAATGATGGTCAACGCTTAGGCTGGACCTGCGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CSSSWTDDNDGQRLGWTCGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...GCAGGTCCAGCCTAAGCGTTGACCATCATTGTCATCAGTCCATGAGGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AGGCCAGCGTGGATACGAGGCTGTAGGACCCACCTCAAATGTCAAGATCCCAAGGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RPAWIRGCRTHLKCQDPKGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...CTTGGGATCTTGACATTTGAGGTGGGTCCTACAGCCTCGTATCCACGCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPQVGQG*FHSGEG
Trigger: GCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTG...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPGCCPP*LQGPSH
Trigger: ATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCC...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCTTCACCCCTGGCCCTGGCTaGTGTCCACCGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPASWQAFCQALLSSLSFTPGPG*CPPCLQ
Trigger: CTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGT...GAAGGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGLDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGACCCACGAGGCCACCTaGGGGGCCGGGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMTHEAT*GAGREE
Trigger: CTCTTCCCTCCCGGCCCCGCAGGTGGCCTCGTGGGT...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGATCCTGGGATCTGGACTaGATCCTCTGCAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGSWDLD*ILCSKR
Trigger: CCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGA...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTTCACGTTTTGTAGATaGGAGACGAGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPFTFCR*ETRSEG
Trigger: CCCTTCGGACCTCGTCTCCCATCTACAAAACGTGAA...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCCCTGCAGCGGGGCAGTaGTATATGCACCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LRGKGERAGACLNPSGHFPAAGQ*YMHLFV
Trigger: TACAAAAAGGTGCATATACCACTGCCCCGCTGCAGG...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGCTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATCTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGACTTCGGAAAGGCAGCTaGGCCGGAAGTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGLRKGS*AGSDGA
Trigger: TGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAG...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCAAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATTGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGC +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDCQSPS*VQGLVR
Trigger: GCGTACCAAGCCCTGTACCCACGAGGGAGACTGACA...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCTGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGC +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVCQSPS*VQGLVR
Trigger: GCGTACCAAGCCCTGTACCCACGAGGGAGACTGACA...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFRGRME*RVTWSL
Trigger: CAATGACCAGGTCACCCTCCACTCCATCCGGCCGCG...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAAGATACCCCTGGCCCTaGCTGCTGTCCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGRYPWP*LLSTVP
Trigger: AGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCT...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATACAGGAAGGGGTGTGTaGGGTACTACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDTGRGV*GTTSLH
Trigger: GTGGAGGGACGTAGTACCCCACACACCCCTTCCTGT...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGGGGGCTCTGCATGTCTaGTCCCCAACCTGGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEGALHV*SPTWSG
Trigger: CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCC...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGGAAACTCCTGAATCCTaGCAGCTCCTCCCCACGGTT +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGETPES*QLLPTV
Trigger: AACCGTGGGGAGGAGCTGCCAGGATTCAGGAGTTTC...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCCAGGCTGGAGTGCAATaGGATGATCTCGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCQAGVQ*DDLGSV
Trigger: CACTGAGCCGAGATCATCCCATTGCACTCCAGCCTG...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR CCA 90 bp GAAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTAGGGGTCCTGGCAGCTaGCTTGTTGCTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EVKMAGSGIGTVGFAVPPRGPGS*LVAARS
Trigger: GCTCCTAGCAGCAACAAGCCAGCTGCCAGGACCCCT...AGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 72 bp CAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTaGGGCCTGCCTCCAGCTAGATGCTGCAAATCAGTC +
Preference number: 4 (lower is better)
Translates to: QPAVPAVSLLTP*GLPPARCCKSV
Trigger: GACTGATTTGCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGAAGTGATGGAGCAGGGTaGCCAGGAGGGGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGSDGAG*PGGARC
Trigger: ACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTCCACGCCCTGGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTAGTGATGGAGCAGGGTaGCCAGGAGGGGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: VHALGKNRQRSAYTLKDSSDGAG*PGGARC
Trigger: ACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACT...AGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGACAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTCCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAACCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVGSRPS*WIGGGR
Trigger: TCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCC...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTCATCCCAGCACCTGGGTTaGCGCTGGAGGACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SEDGWIGHWHSRVCCASSSQHLG*RWRTKN
Trigger: GTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGA...TGAGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCCCACGAGGCCACAATaGGGACTTCCCCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPPTRPQ*GLPHPS
Trigger: ACTGGGGTGGGGAAGTCCTCATTGTGGCCTCGTGGG...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTGTTGCCTCCATTTaGGAGAATACTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHSVASI*ENTSRG
Trigger: GCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGA...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTAGAGAAGGCCCCTGCTaGGGTACACATGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGREGPC*GTHGGK
Trigger: CTTCCCACCATGTGTACCTCAGCAGGGGCCTTCTCT...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCTCTCCTACAGGGGTCTaGAGCCCCTGCCTCAGAACC +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPASPTGV*SPCLRT
Trigger: GGTTCTGAGGCAGGGGCTTCAGACCCCTGTAGGAGA...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGTTCCCCAGCCGCTCTaGATGGGAGGGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETVPQPL*MGGARG
Trigger: GCCTCTGGCCCCTCCCATGCAGAGCGGCTGGGGAAC...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000217254.11
CDS-3UTR GCA 90 bp GTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCAGCTAGATGCTGCCATACTTCTTCCTTCTaGTGGTCCAGTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPAVSLLTPLGLPPARCCHTSSF*WSSSPA
Trigger: GGCTGGGGAACTGGACCAGCAGAAGGAAGAAGTATG...GCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000217254.11
CDS-3UTR GCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGATCTGGGAACTCCCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGSGNSL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGA...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVQVGQG*FHSGEG
Trigger: GCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTG...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCATTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RAAPCISRCHLPHSPQWALLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...TGCCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAAACAGCAGAGACCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGNSRDL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGTCTCTGCTGTT...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473664.2
CDS-3UTR GCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCACCACCTAGCAAGATaGTGGGACCTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVAHHLAR*WDLGPR
Trigger: TCTGGGCCCCAGGTCCCAGCATCTTGCTAGGTGGTG...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR GCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCTGGCACAGTAGGGTTTaGTGTGCCTCCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVWHSRV*CASSGD
Trigger: GTCTCCTGAGGAGGCACAGCAAACCCTACTGTGCCA...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTCCTGGGATCTGGACTaGATCCTCTGCAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCSWDLD*ILCSKR
Trigger: CCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGA...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGCCAGCGTGGATACGAGGCTGTAGGACCCACCTCAAATGTCAAGATCCCAAGGGCTCTCCTGGGATCTaGACTGGATCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPAWIRGCRTHLKCQDPKGSPGI*TGSSAA
Trigger: TGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCC...CTTGGGATCTTGACATTTGAGGTGGGTCCTACAGCCTCGTATCCACGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPAAEGLS*DLDWIL
Trigger: GAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAAAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKKKAML*WPSSTQ
Trigger: CTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTT...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAATGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGC +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQECQSPS*VQGLVR
Trigger: GCGTACCAAGCCCTGTACCCACGAGGGAGACTGACA...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGCGGACACCAAAGCTCTaGGAACTCCCTGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQRTPKL*ELPVRC
Trigger: ACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCG...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAGTGACCTGGCCTCTCTaGACCCCAGTTCCGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLVTWPL*TPVPSV
Trigger: CACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCAC...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCGTCCTTCTTCTGGGCTaGGAGAGTGGGTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVVLLLG*ESGCKQ
Trigger: CTGCTTACACCCACTCTCCCAGCCCAGAAGAAGGAC...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTCCACGCCCTGGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTCGGCAGGAAGGTCACTaGAGAGGTGCAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VHALGKNRQRSAYTLKDSRQEGH*RGAVHQ
Trigger: CTGGTGGACTGCACCTCTTCAGTGACCTTCCTGCCG...AGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGGCAGCCGGCTCATaGACGGCAGGAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: STLLATSRLCRLPLLLLRWAAGS*TAGRSL
Trigger: CAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCA...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTTCCCCACAGTCCCCAGTGGGCACTTGCGTTCATGATTCAATTACTCAGGCTCCCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPHSPQWALAFMIQLLRLPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...GAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPAWYAV*YLSDID
Trigger: GTCAATGTCACTGAGATATCAGACAGCGTACCAAGC...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGCCAGCGTGGATACGAGGCTGTAGGACCCACCTCAAATGTCAAGATCCCAAGGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RPAWIRGCRTHLKCQDPKGSRPS*WIGGGR
Trigger: TCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCC...CTTGGGATCTTGACATTTGAGGTGGGTCCTACAGCCTCGTATCCACGCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCTCCCAGCACCTGGGTTaGCGCTGGAGGACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVASQHLG*RWRTKN
Trigger: GTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGA...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAACCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCTTTTGCAAGGCTGCATaGCCTCCAGGAGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVFCKAA*PPGAEH
Trigger: ATGCTCTGCTCCTGGAGGTCATGCAGCCTTGCAAAA...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VVQTATLVTTMDCQISRWGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTTCTGGGAACTCCCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTSGNSL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGA...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCCCCAGCTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 4 (lower is better)
Translates to: PNLVGEFTFRGSGMGLPQLGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...CTGGGGAAGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCGGCTCAGTGACCCTCTaGCTCCTGGGCTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPGSVTL*LLGSSD
Trigger: ATCACTTGAGCCCAGGAGGCAGAGGGTCACTGAGCC...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR GCA 90 bp ACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCTTTATAGAAACAGGTGGCCTTCCATaGAAACCTACATCTGGGACC +
Preference number: 4 (lower is better)
Translates to: TLRLDLPRARHRSKSFIETGGLP*KPTSGT
Trigger: GGTCCCAGATGTAGGTTTGCATGGAAGGCCACCTGT...TTCTATAAAGCTCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGCTCTCCTGGGATCTaGACTGGATCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPGSPGI*TGSSAA
Trigger: TGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCC...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMAEGLS*DLDWIL
Trigger: GAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATGATGGTCAACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGATTCACGTTTTGTAGATaGGAGACGAGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NDGQRLGWTCHVPGTAPRFTFCR*ETRSEG
Trigger: CCCTTCGGACCTCGTCTCCCATCTACAAAACGTGAA...TCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCGGACACCAAAGCTCTaGGAACTCCCTGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRRTPKL*ELPVRC
Trigger: ACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTAAGCCTCCCAGCACCTaGGTTGACGCTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGKPPST*VDAGGQ
Trigger: TTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTT...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTGAGTGGAGGGTGACCTaGTCATTGAGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCEWRVT*SLRRSS
Trigger: GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTC...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTAGATACCCCTGGCCCTaGCTGCTGTCCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGRYPWP*LLSTVP
Trigger: AGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCT...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GAGCTGGGATTTGGACCAGGGTGCTCCCCAAACATGTTCTTAACCACTACATGTAGATACCCCTGGCCCTaGCTGCTGTCCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: ELGFGPGCSPNMFLTTTCRYPWP*LLSTVP
Trigger: AGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCT...ACATGTAGTGGTTAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCAGGTGGTAGGCAACTaGCCCATAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGQVVGN*PIGQAG
Trigger: TCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTG...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTTCCCCACAGTCCCCAGTGGGCACTTGCGTTCATGATTCAATTACTCAGGCTCGGCTCATCACCGCCATaGCCATGTTGTAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPHSPQWALAFMIQLLRLGSSPP*PCCSPQ
Trigger: TTGGGGGCTACAACATGGCCATGGCGGTGATGAGCC...GAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGACCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCACAGGAAGGGGTGTGTaGGGTACTACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVATGRGV*GTTSLH
Trigger: GTGGAGGGACGTAGTACCCCACACACCCCTTCCTGT...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTCTGCTGAGGTACACATaGTGGGAAGAGGCCTACCAG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTLLRYT*WEEAYQ
Trigger: CTGGTAGGCCTCTTCCCACCATGTGTACCTCAGCAG...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AATGATGGTCAACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCATCTCTCTACAGGTaGCCTTCCATGCAAACCTAC +
Preference number: 4 (lower is better)
Translates to: NDGQRLGWTCHVPGTAPRASLYR*PSMQTY
Trigger: GTAGGTTTGCATGGAAGGCCACCTGTAGAGAGATGC...TCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CACTACATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGGGCCTGGCGCCGCTGTaGGCCCACCTGGTGTTTACC +
Preference number: 4 (lower is better)
Translates to: HYMYSPVGAFGILGSEMKGLAPL*AHLVFT
Trigger: GGTAAACACCAGGTGGGCCCACAGCGGCGCCAGGCC...CTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACATGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 72 bp CAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: QEGLLDAGCFFL*PPCHACEVVGT
Trigger: AGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CACTACATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGCAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: HYMYSPVGAFGILGSEMKQLGRK*WSRVTR
Trigger: CCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTG...CTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACATGTAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTGGGCAGCCGGCTCATaGACGGCAGGAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMWAAGS*TAGRSL
Trigger: CAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCA...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCACGGGCAAGAGGCCGCTaGGTCCTTCACCCACAAAGA +
Preference number: 4 (lower is better)
Translates to: GTYWNPHCMHEETGTEKPRARGR*VLHPQR
Trigger: TCTTTGTGGGTGAAGGACTCAGCGGCCTCTTGCCCG...TGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGAWYAV*YLSDID
Trigger: GTCAATGTCACTGAGATATCAGACAGCGTACCAAGC...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCTCCCAGCACCTGGGTTaGCGCTGGAGGACAAAGAAC +
Preference number: 4 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPSQHLG*RWRTKN
Trigger: GTTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGA...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CACTACATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGCCACCAGGGTATAGATaGAGGCCAGGTGCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HYMYSPVGAFGILGSEMKPPGYR*RPGAPG
Trigger: GCCCGGCGCACCTGGCCTTCATCTATACCCTGGTGG...CTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACATGTAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp CTCTCTGTTCCTGCCCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSVPAPCSVTWPLWTPVPKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...CGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAACAAGGTCACACAGCCTaGAGGGACAGCCGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQQGHTA*RDSRLS
Trigger: GGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTG...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAACTGGACTGGATCCTCTaGAGCAAGCGGCCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQLDWIL*SKRPVR
Trigger: CCGGACAGGCCGCTTGCTGCAGAGGATCCAGTCCAG...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGTTTCTCAGATCAGCCTaGAGCGGGGCAGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPFLRSA*SGAVVY
Trigger: ATATACCACTGCCCCGCTGCAGGCTGATCTGAGAAA...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR GCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQGHGGI*PGPEAF
Trigger: GAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCC...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAACGCAGACCAGCAGGTaGATCAGGAAGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GTYWNPHCMHEETGTEKPTQTSR*IRKAMA
Trigger: CGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGT...TGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETGCCPP*LQGPSH
Trigger: ATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCC...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFGCCPP*LQGPSH
Trigger: ATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPLDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAACTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 4 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGLGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPADSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CAAACCTACATCTGGGACCACTGTCCTTCCTCACAGGTCCTTGTCCCTGGGGTCGGGGTTTCTTGGATTTaGAGGTCTGAGCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QTYIWDHCPSSQVLVPGVGVSWI*RSEPLV
Trigger: GACCAAAGGCTCAGACCTGCAAATCCAAGAAACCCC...GACCCCAGGGACAAGGACCTGTGAGGAAGGACAGTGGTCCCAGATGTAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCCTGGCCTCAGCTACCTaGCTCTGCAATGTGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPALASAT*LCNVEC
Trigger: ACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCTCCAGGAGCAGAGCATaGAGGCCTGGCGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSSRSRA*RPGAAV
Trigger: CACAGCGGCGCCAGGCCTGCATGCTCTGCTCCTGGA...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGGGCTCTCCTGGGATCTaGACTGGATCCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEGSPGI*TGSSAA
Trigger: TGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCC...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGTTCACGTTTTGTAGATaGGAGACGAGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVFTFCR*ETRSEG
Trigger: CCCTTCGGACCTCGTCTCCCATCTACAAAACGTGAA...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCTTTATAGAACCTGCAGCGGGGCAGTaGTATATGCACCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: TLRLDLPRARHRSKSFIEPAAGQ*YMHLFV
Trigger: TACAAAAAGGTGCATATACCACTGCCCCGCTGCAGG...TTCTATAAAGCTCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETKAMLW*PSSTQE
Trigger: CTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTT...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCGGACACCAAAGCTCTaGGAACTCCCTGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: CADCHSCYYDGLSDQQVARTPKL*ELPVRC
Trigger: ACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCG...GGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTCCACGCCCTGGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTAAGCCTCCCAGCACCTaGGTTGACGCTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: VHALGKNRQRSAYTLKDSKPPST*VDAGGQ
Trigger: TTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTT...AGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTG +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFRGRME*RVTWSL
Trigger: CAATGACCAGGTCACCCTCCACTCCATCCGGCCGCG...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGGCGGCCTGCCTAGGCTaGACAGTGCAGATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWAACLG*TVQIAE
Trigger: TTCTGCAATCTGCACTGTCCAGCCTAGGCAGGCCGC...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAACCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTAGCCTGCAGCGGGGCTaGCAGAGAAGGACACCAGGT +
Preference number: 4 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSSLQRG*QRRTPG
Trigger: ACCTGGTGTCCTTCTCTGCCAGCCCCGCTGCAGGCT...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR CCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCCACACAGCTGACAGGTaGCAGAGCTGGGATTTGGAC +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPAHTADR*QSWDLD
Trigger: GTCCAAATCCCAGCTCTGCCACCTGTCAGCTGTGTG...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGGTCAACGCTTAGGCTaGACCTGCCACGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFGQRLG*TCHVPG
Trigger: GCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GAAAATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCAGACCCCTCCCCTTCTaGCCTCAGCTACCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ENPASWQAFCQALLSSLSRPLPF*PQLPAS
Trigger: AGAGGCAGGTAGCTGAGGCCAGAAGGGGAGGGGTCT...GGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GACCAGGTCAAGCTCTTTCTCCAAGCCTCAGGGTTTCCCCTTATAAACGGGAACCGCTGTGGGCCCACCTaGTGTTTACCTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: DQVKLFLQASGFPLINGNRCGPT*CLPAGI
Trigger: AATGCCAGCAGGTAAACACCAGGTGGGCCCACAGCG...GTTCCCGTTTATAAGGGGAAACCCTGAGGCTTGGAGAAAGAGCTTGACCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 72 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTGTTACTACGATGGACT +
Preference number: 4 (lower is better)
Translates to: QGRVSTLLATSR*CRLPLLLLRWT
Trigger: AGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGTGTTCCTGGGCAGCCGGCTCATaGACGGCAGGAAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: MYSPVGAFGILGSEMKCSWAAGS*TAGRSL
Trigger: CAGTGACCTTCCTGCCGTTCATGAGCCGGCTGCCCA...GGAACACTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp GTCAAGCTCTTTCTCCAAGCCTCAGGGTTTCCCCTTATAAACGGGAACCTCAGTCCACAAAGAAGGTGGTaGGGTAGTAGGTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VKLFLQASGFPLINGNLSPQRRW*GSRWAA
Trigger: GGCTGCCCACCTACTACCTCACCACCTTCTTTGTGG...ACTGAGGTTCCCGTTTATAAGGGGAAACCCTGAGGCTTGGAGAAAGAGCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPAWYAV*YLSDID
Trigger: GTCAATGTCACTGAGATATCAGACAGCGTACCAAGC...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQAWYAV*YLSDID
Trigger: GTCAATGTCACTGAGATATCAGACAGCGTACCAAGC...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATCCCACGAGGCCACAATaGGGACTTCCCCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNPTRPQ*GLPHPS
Trigger: ACTGGGGTGGGGAAGTCCTCATTGTGGCCTCGTGGG...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATGACTTTCCCAAGGTCACACAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: MTFPRSHSLKGQPAVPAVGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...AACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTGGGAAAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FERILPGALHVWSPTWSGGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: FERILPGALHVWSPTWSGHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...CCCCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCGCCAGGAAGCTGAGTTaGAGTGAAGATGGCTGGATC +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPAARKLS*SEDGWI
Trigger: GATCCAGCCATCTTCACTTCAACTCAGCTTCCTGGC...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCCCTCAGCCAGGAAGCTaGGTTGAAGTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPAPQPGS*VEVKMA
Trigger: AGCCATCTTCACTTCAACTCAGCTTCCTGGCTGAGG...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp GTCCACGCCCTGGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTGCTGAGACTCGCCTCTaGGCCTCCAAATCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VHALGKNRQRSAYTLKDSAETRL*ASKSEF
Trigger: AAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGC...AGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGGGACCAAGAAGGCGATaGTGTGGTGGCCGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMGPRRR*CGGRPA
Trigger: TGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCC...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGGCTGTCCACCGTGCCTaGAGGGCCCAAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQAVHRA*RAQVIL
Trigger: GAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGC...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGCTGTCCACCGTGCCTaGAGGGCCCAAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFAVHRA*RAQVIL
Trigger: GAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCGCTGCTTTTTCCTTTTaGCTCCGTGCCATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFAAFSF*LRAMPV
Trigger: CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGC...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTTTGCTTGATGCGGGCTaGTTTTTCCTTTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTLLDAG*FFLLPP
Trigger: CGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAA...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: KGQPAVPAVSLLTPLGLPDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...AGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGAATACTCTCTAGGTaGGAGGAGCGCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMGILSR*EERLLG
Trigger: TCCCAGAAGGCGCTCCTCGCACCTAGAGAGTATTCC...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMAEGLS*DLDWIL
Trigger: GAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTCAAGCTCTTTCTCCAAGCCTCAGGGTTTCCCCTTATAAACGGGAACCTCAGTTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VKLFLQASGFPLINGNLSWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...ACTGAGGTTCCCGTTTATAAGGGGAAACCCTGAGGCTTGGAGAAAGAGCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGC +
Preference number: 4 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRCQSPS*VQGLVR
Trigger: GCGTACCAAGCCCTGTACCCACGAGGGAGACTGACA...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACGGACACCAAAGCTCTaGGAACTCCCTGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGRTPKL*ELPVRC
Trigger: ACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCG...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTAAAGCCTCCCAGCACCTaGGTTGACGCTGGAGGACAA +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLKPPST*VDAGGQ
Trigger: TTGTCCTCCAGCGTCAACCCAGGTGCTGGGAGGCTT...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTAGGCTCATCACCGCCATaGCCATGTTGTAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLGSSPP*PCCSPQ
Trigger: TTGGGGGCTACAACATGGCCATGGCGGTGATGAGCC...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTTGTCAGATCAGCAGGTaGCCCAGGAGGGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGCQISR*PRRACL
Trigger: CAAGCAAGCCCTCCTGGGCCACCTGCTGATCTGACA...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TGGACAGTGCAGATTGCAGAAGTCCGCGGACGAGAAGAGCCGCAGCACGTTGACCTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WTVQIAEVRGREEPQHVDLLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...GTCAACGTGCTGCGGCTCTTCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAGTCTGGTCCCCAACCTaGTCGGGGAGTTCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLVWSPT*SGSSLS
Trigger: TGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGAC...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTCGAAGGAGAATCCAGTaGCTTTTCTGGGTTCACGTG +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTRRRIQ*LFWVHV
Trigger: CACGTGAACCCAGAAAAGCCACTGGATTCTCCTTCG...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AATGATGGTCAACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAAGCAGTCCTAGGAGGTaGAATGTTACACTCCCATTT +
Preference number: 4 (lower is better)
Translates to: NDGQRLGWTCHVPGTAPRSSPRR*NVTLPF
Trigger: AAATGGGAGTGTAACATTCCACCTCCTAGGACTGCT...TCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 72 bp CTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTaGTTACTACGATGGACTGTCAGATCAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLATSRLCRLPL*LLRWTVRSAGG
Trigger: GCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGCCAGCGTGGATACGAGGCTGTAGGACCCACCTCAAATGTCAAGATCCCAAGGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGAC +
Preference number: 4 (lower is better)
Translates to: RPAWIRGCRTHLKCQDPKAWYAV*YLSDID
Trigger: GTCAATGTCACTGAGATATCAGACAGCGTACCAAGC...CTTGGGATCTTGACATTTGAGGTGGGTCCTACAGCCTCGTATCCACGCTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GCCCAGGAGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AQEGLLDAGCFFLLPPCHKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...ATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTTACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGGCCGGATACTCACAATaGGGACTTCCCCACCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQAGYSQ*GLPHPS
Trigger: ACTGGGGTGGGGAAGTCCTCATTGTGAGTATCCGGC...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR TCA 90 bp AGGCCAGCGTGGATACGAGGCTGTAGGACCCACCTCAAATGTCAAGATCCCAAGTGGAATTCTGGGTTCTaGAATGAAGTGTTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RPAWIRGCRTHLKCQDPKWNSGF*NEVFPH
Trigger: GTGGGGGAACACTTCATTTCAGAACCCAGAATTCCA...CTTGGGATCTTGACATTTGAGGTGGGTCCTACAGCCTCGTATCCACGCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAATTTCTCAGATCAGCCTaGAGCGGGGCAGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKFLRSA*SGAVVY
Trigger: ATATACCACTGCCCCGCTGCAGGCTGATCTGAGAAA...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTTTTCTCAGATCAGCCTaGAGCGGGGCAGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: LHLREYFQGLCMSGPQPGFLRSA*SGAVVY
Trigger: ATATACCACTGCCCCGCTGCAGGCTGATCTGAGAAA...ACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR GCA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp ACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTTTCTGCTCCAAGATTCTTGCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TDRGLPIPLKTLSAPRFLQVGQG*FHSGEG
Trigger: GCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTG...CAAGAATCTTGGAGCAGAAAGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAACCCCTGGCCCTGGCTaGTGTCCACCGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NPKAKMPKILSLSACLVETPGPG*CPPCLQ
Trigger: CTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGT...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGACTGTCTCTCTGTTCCTaGCCCTTGCTCTGTGACCTG +
Preference number: 4 (lower is better)
Translates to: STLLATSRLCRLPLLLLRLSLCS*PLLCDL
Trigger: CAGGTCACAGAGCAAGGGGCAGGAACAGAGAGACAG...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 4 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGTGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAATGGCCCAGGAGGGCTTaGTTGATGCGGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQWPRRA*LMRAAF
Trigger: AAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGGCCA...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PASRRVLTLQLVGFMGQEATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTATACTTCCAGGGGCTCTaGATGTCTGGTCCCCAACCT +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLYFQGL*MSGPQP
Trigger: AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTA...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GAAGTGAAGATGGCTGGATCGGGCATTGGCACAGTAGGGTTTGCTGTGCCTCCTGGATTTGGACCAGGGTaGTCCCCAAACATGTTCTTA +
Preference number: 4 (lower is better)
Translates to: EVKMAGSGIGTVGFAVPPGFGPG*SPNMFL
Trigger: TAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCC...AGGAGGCACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCCATCTTCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACATCCTGGGATCTGGACTaGATCCTCTGCAGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETSWDLD*ILCSKR
Trigger: CCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGA...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTTGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSWRYLP*ARGFLR
Trigger: TCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCA...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: NPKAKMPKILSLSACLVEVRPEP*ARATRA
Trigger: CGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCAC...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCTTCCGGACACCAAAGCTCTaGGAACTCCCTGTGCGATGT +
Preference number: 4 (lower is better)
Translates to: NPASWQAFCQALLSSLSFRTPKL*ELPVRC
Trigger: ACATCGCACAGGGAGTTCCCAGAGCTTTGGTGTCCG...GAAGGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGTAGGCAACTaGCCCATAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQQVVGN*PIGQAG
Trigger: TCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTG...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGGGCTCATCACCGCCATaGCCATGTTGTAGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLGSSPP*PCCSPQ
Trigger: TTGGGGGCTACAACATGGCCATGGCGGTGATGAGCC...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCCTTGCTCTGTGACCTaGCCTCTCTGGACCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQPCSVT*PLWTPV
Trigger: AACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGG...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAACAGGAAGGGGTGTGTaGGGTACTACGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQTGRGV*GTTSLH
Trigger: GTGGAGGGACGTAGTACCCCACACACCCCTTCCTGT...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GAGCTGGGATTTGGACCAGGGTGCTCCCCAAACATGTTCTTAACCACTACATGTGACTGGTCCACGCCCTaGGTAAGAACAGACAGAGGT +
Preference number: 4 (lower is better)
Translates to: ELGFGPGCSPNMFLTTTCDWSTP*VRTDRG
Trigger: ACCTCTGTCTGTTCTTACCCAGGGCGTGGACCAGTC...ACATGTAGTGGTTAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GAGCTGGGATTTGGACCAGGGTGCTCCCCAAACATGTTCTTAACCACTACATGTCTAGAACCCCAAGACTaGTCCACGCCCTGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ELGFGPGCSPNMFLTTTCLEPQD*STPWVR
Trigger: TCTTACCCAGGGCGTGGACCAGTCTTGGGGTTCTAG...ACATGTAGTGGTTAAGAACATGTTTGGGGAGCACCCTGGTCCAAATCCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp ATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGTGTTCCGATCTCCAGGGGTCCTaGCAGCTGGCTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: MYSPVGAFGILGSEMKCSDLQGS*QLACCC
Trigger: GCAGCAACAAGCCAGCTGCCAGGACCCCTGGAGATC...GGAACACTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GAAAATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCCCTGCCTCTGCAATGTaGAGTGTGCTGATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ENPASWQAFCQALLSSLSPASAM*SVLISR
Trigger: CCTGGAGATCAGCACACTCCACATTGCAGAGGCAGG...GGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSGSRPS*WIGGGR
Trigger: TCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCC...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCGGGCACTTGCGTTCATaGTTCAATTACTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFGHLRS*FNYSGS
Trigger: AGAGCCTGAGTAATTGAATCATGAACGCAAGTGCCC...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGTCGTCACAGGTAGTGTaGCACAGAGTTGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMSSQVV*HRVGDR
Trigger: TCTATCCCCAACTCTGTGTCACACTACCTGTGACGA...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VVQTATLVTTMDCQISRWSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTATACGTCCCTCCACACTaGGAATCCGAAAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLYVPPH*ESESQD
Trigger: ATCTTGGCTTTCGGATTCTCAGTGTGGAGGGACGTA...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCTCTGTTGCCTCCATTTaGGAGAATACTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPSVASI*ENTSRG
Trigger: GCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGA...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCCCTAACCGTGATTCATaGAAGAAAAGTTCAATCCGA +
Preference number: 4 (lower is better)
Translates to: KERGQGRVSTLLATSRLCPNRDS*KKSSIR
Trigger: TCGGATTGAACTTTTCTTTCATGAATCACGGTTAGG...GCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR GCA 90 bp GTCCACGCCCTGGGTAAGAACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTTTTCTCAGATCAGCCTaGAGCGGGGCAGTGGTATAT +
Preference number: 4 (lower is better)
Translates to: VHALGKNRQRSAYTLKDSFLRSA*SGAVVY
Trigger: ATATACCACTGCCCCGCTGCAGGCTGATCTGAGAAA...AGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGTTCTTACCCAGGGCGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATAGGTCACTGAAGAGGTaGAGTCCACCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNRSLKR*SPPGPG
Trigger: TCCTGGCCCTGGTGGACTGCACCTCTTCAGTGACCT...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGTCTGGGAACTCCCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLSGNSL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGA...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCTGGACAGTGCAGATTaGAGAAGTCCGCGGACGAGA +
Preference number: 4 (lower is better)
Translates to: LLGCADCHSCYYDGLSDQLDSAD*RSPRTR
Trigger: TCTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAG...CTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATTCTGTTCCTGCCCCTTaGTCTGTGACCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNSVPAP*SVTWPL
Trigger: GAGAGGCCAGGTCACAGAGCAAGGGGCAGGAACAGA...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCGATAGAGCCGCACCTTaGATTTCCAGGTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPDRAAP*ISRCHL
Trigger: AAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATC...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCLGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGNNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GACCAGGTCAAGCTCTTTCTCCAAGCCTCAGGGTTTCCCCTTATAAACGGGAACGTACAGCCCAGTAGGTaGGTTTGGAATTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: DQVKLFLQASGFPLINGNVQPSR*VWNSGF
Trigger: GAACCCAGAATTCCAAACGCACCTACTGGGCTGTAC...GTTCCCGTTTATAAGGGGAAACCCTGAGGCTTGGAGAAAGAGCTTGACCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCTTCGGAGTTTTGCAAGGCTaGATGACCTCCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NPASWQAFCQALLSSLSFGVLQG*MTSRSR
Trigger: TCTGCTCCTGGAGGTCATGCAGCCTTGCAAAACTCC...GAAGGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGCAAAGGAGAGTTCACGTTTTGTAGATaGGAGACGAGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: VICLSCRSPSVRLRGKGEFTFCR*ETRSEG
Trigger: CCCTTCGGACCTCGTCTCCCATCTACAAAACGTGAA...CTCTCCTTTGCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTTCACGTTTTGTAGATaGGAGACGAGGTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPLLPPFERILPGALHVWFTFCR*ETRSEG
Trigger: CCCTTCGGACCTCGTCTCCCATCTACAAAACGTGAA...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCTTTCCAGTTTCTAGGTCCCAAGGTAGAAAATCCAGCTTCCTGGCAAGCTTTCCAGGTGGTAGGCAACTaGCCCATAGGACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SFQFLGPKVENPASWQAFQVVGN*PIGQAG
Trigger: TCCTGCCTGTCCTATGGGCCAGTTGCCTACCACCTG...GAAAGCTTGCCAGGAAGCTGGATTTTCTACCTTGGGACCTAGAAACTGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGCCCCACAGTCCCCAGTaGGCACTTGCGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLPHSPQ*ALAFMI
Trigger: AATCATGAACGCAAGTGCCCACTGGGGACTGTGGGG...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTCTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCLLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTCTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGLLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGAATTCCCTCACAGGGCTaGGACTTCCTTCCTCATACC +
Preference number: 4 (lower is better)
Translates to: STLLATSRLCRLPLLLLRIPSQG*DFLPHT
Trigger: GGTATGAGGAAGGAAGTCCCAGCCCTGTGAGGGAAT...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACTGAGGTACACATGGTaGGAAGAGGCCTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLLRYTW*EEAYQS
Trigger: TGACTGGTAGGCCTCTTCCCACCATGTGTACCTCAG...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGATCCAGTGGCTTTTCTaGGTTCACGTGCCCATGATC +
Preference number: 4 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMIQWLF*VHVPMI
Trigger: GATCATGGGCACGTGAACCCAGAAAAGCCACTGGAT...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTCAAGATGCTGGGACCTaGGGCCCAGAGTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGQDAGT*GPEFSL
Trigger: AAGAGAAAACTCTGGGCCCCAGGTCCCAGCATCTTG...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR TCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATCTGTTGCCTCCATTTaGGAGAATACTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: STLLATSRLCRLPLLLLRSVASI*ENTSRG
Trigger: GCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGA...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCTGTTGCCTCCATTTaGGAGAATACTTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRSVASI*ENTSRG
Trigger: GCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGA...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGAAGCTGAGTTGAAGTaGAGATGGCTGGATCGGGCA +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFEAELK*RWLDRA
Trigger: TGCCCGATCCAGCCATCTTCACTTCAACTCAGCTTC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp ATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGTGTTCCTCTGGGAACTCCCTGTaGGATGTCAGTCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: MYSPVGAFGILGSEMKCSSGNSL*DVSLPR
Trigger: ACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGA...GGAACACTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp CTTCCCCACAGTCCCCAGTGGGCACTTGCGTTCATGATTCAATTACTCAGGCTCTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 4 (lower is better)
Translates to: LPHSPQWALAFMIQLLRLSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...GAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTATTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: STLLATSRLCRLPLLLLRFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 4 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFLGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGAGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPNNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCGAGTGGAGGGTGACCTaGTCATTGAGGAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSEWRVT*SLRRSS
Trigger: GGAAGACCTCCTCAATGACCAGGTCACCCTCCACTC...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
3UTR CAA 72 bp GAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCTGTGAGACTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ESQDAQDSIVIC*SCRSPSVRLRG
Trigger: GCCCCTCAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp ATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGAAAAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: MTGRGVWGTTSLHTENPKKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...TTTCGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGTCCCCACTGCATGCATaGAGAAACAGGCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLSPLHA*RNRHRE
Trigger: TTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGA...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGTCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 4 (lower is better)
Translates to: VVQTATLVTTMDCQISRWSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGTTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGNNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTNNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTCTGAGCCTTTGGTCCTaGTTCCCTCAAATCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFLSLWS*FPQILH
Trigger: ATGGAGGATTTGAGGGAAGCAGGACCAAAGGCTCAG...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAACCTGCAGCGGGGCAGTaGTATATGCACCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQPAAGQ*YMHLFV
Trigger: TACAAAAAGGTGCATATACCACTGCCCCGCTGCAGG...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR CCA 90 bp CACTACATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGGCAGGGCCGAAATCCTaGGAATTAGACCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: HYMYSPVGAFGILGSEMKAGPKS*ELDQVK
Trigger: CTTGACCTGGTCTAATTCCCAGGATTTCGGCCCTGC...CTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACATGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp GACCAGGTCAAGCTCTTTCTCCAAGCCTCAGGGTTTCCCCTTATAAACGGGAACGGTCCCAGTCTAGGCTaGTTCAATCTGCATTTTATC +
Preference number: 4 (lower is better)
Translates to: DQVKLFLQASGFPLINGNGPSLG*FNLHFI
Trigger: GATAAAATGCAGATTGAACCAGCCTAGACTGGGACC...GTTCCCGTTTATAAGGGGAAACCCTGAGGCTTGGAGAAAGAGCTTGACCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CACTACATGTACAGCCCAGTAGGTGCGTTTGGAATTCTGGGTTCTGAAATGAAGGCAGGTCTGAGCCTTTaGTCCTGCTTCCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: HYMYSPVGAFGILGSEMKAGLSL*SCFPQI
Trigger: GATTTGAGGGAAGCAGGACCAAAGGCTCAGACCTGC...CTTCATTTCAGAACCCAGAATTCCAAACGCACCTACTGGGCTGTACATGTAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp ACAGACAGAGGTCTGCCTATACCCTTAAAGACTCTTTCTGCTCCAAGATTCTTGGGCTGGATCGGGCATTaGCACAGTAGGGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TDRGLPIPLKTLSAPRFLGWIGH*HSRVCC
Trigger: ACAGCAAACCCTACTGTGCCAATGCCCGATCCAGCC...CAAGAATCTTGGAGCAGAAAGAGTCTTTAAGGGTATAGGCAGACCTCTGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR TCA 90 bp GGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GCADCHSCYYDGLSDQQVKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...CACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGCACAGAGAAGCCAAATaGCTTTCCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMHREAK*LSQGHT
Trigger: TGTGTGACCTTGGGAAAGTCATTTGGCTTCTCTGTG...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAACCAGGAGGGCTTGCTTaGTGCGGGCTGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NPKAKMPKILSLSACLVEPGGLA*CGLLFP
Trigger: AGGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGG...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTTTCTGGGTTCTGAAATaGAGTGTTCCCCCACTAGGA +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFFWVLK*SVPPLG
Trigger: TCCTAGTGGGGGAACACTTCATTTCAGAACCCAGAA...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTATCCCCAGTGGGCACTTaGGTTCATGATTCAATTACT +
Preference number: 4 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLSPVGT*VHDSIT
Trigger: AGTAATTGAATCATGAACGCAAGTGCCCACTGGGGA...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGCCACTTCTAGGTTGTaGAGACTGCCACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETATSRL*RLPLLL
Trigger: TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGAGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCAACAATCACCTCTGTTaGCTCCATTTGAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: LCCLHLREYFQGLCMSGPNNHLC*LHLREY
Trigger: GTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT...GGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp CTTCCCCACAGTCCCCAGTGGGCACTTGCGTTCATGATTCAATTACTCAGGCTCAGGTGCATGCCACCATaGCAGCTAATTTTGTATTTT +
Preference number: 4 (lower is better)
Translates to: LPHSPQWALAFMIQLLRLRCMPP*QLILYF
Trigger: AAAATACAAAATTAGCTGGCATGGTGGCATGCACCT...GAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR GCA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCACCTCAGTGGCTATCTaGTCCTCCTCATGGACTGAT +
Preference number: 4 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSTSVAI*SSSWTD
Trigger: ATCAGTCCATGAGGAGGAGCAGATAGCCACTGAGGT...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATCCTGCAGCGGGGCAGTaGTATATGCACCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNPAAGQ*YMHLFV
Trigger: TACAAAAAGGTGCATATACCACTGCCCCGCTGCAGG...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTCTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGLLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATGTGTCTCAACCCTTCTaGCCACTTCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNVSQPF*PLLGCA
Trigger: TGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACAC...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTAAATCAGTCCTCTCTTaGGAGTCAAAGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGKSVLS*ESKQRR
Trigger: TCTCCTTTGCTTTGACTCTCAAGAGAGGACTGATTT...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR TCA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTCACAGAGAACTGAAGTaGCTTGTCTTACACACAGCT +
Preference number: 4 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFHRELK*LVLHTA
Trigger: AGCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTG...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp GCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCCCCTCTGTGAGACTGCTAGGTTGTGCAGACTaGCACTCTTGTTACTACGAT +
Preference number: 4 (lower is better)
Translates to: AQDSIVICLSCRSPSVRLLGCAD*HSCYYD
Trigger: ATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAG...CAGTCTCACAGAGGGGCTTCTACAAGACAAGCAGATAACGATAGAATCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR GCA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGATTCTATCGTTATCTaGTTGTCTTGTAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETDSIVI*LSCRSP
Trigger: GGGGCTTCTACAAGACAAGCAGATAACGATAGAATC...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp TCTTTCCAGTTTCTAGGTCCCAAGGTAGAAAATCCAGCTTCCTGGCAAGCTTTCATCTGCTCCTCCTCATaGACTGATGACAATGATGGT +
Preference number: 4 (lower is better)
Translates to: SFQFLGPKVENPASWQAFICSSS*TDDNDG
Trigger: ACCATCATTGTCATCAGTCCATGAGGAGGAGCAGAT...GAAAGCTTGCCAGGAAGCTGGATTTTCTACCTTGGGACCTAGAAACTGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CCA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCGAAAATCCAGCTTCCTaGCAAGCTTTCTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSENPAS*QAFCQA
Trigger: AGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTC...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR GCA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAATTCCTTTTGCCTCCGTaGCATGCCTGTGAGGTAGTT +
Preference number: 4 (lower is better)
Translates to: NPKAKMPKILSLSACLVEFLLPP*HACEVV
Trigger: AACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CCA 90 bp AGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTACAAAGCAGCTTCAGTaGTATATGCACCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RLCRLPLLLLRWTVRSAGTKQLQ*YMHLFV
Trigger: TACAAAAAGGTGCATATACCACTGAAGCTGCTTTGT...ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488495.3
CDS-3UTR CCA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAACTCTTGTTACTACGATaGACTGTCAGATCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: NPKAKMPKILSLSACLVELLLLR*TVRSAG
Trigger: ACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAG...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS GCA 90 bp TCCGAAGGGGCAGAGGGGCTCTCCTGGGATCTGGACTGGATCCTCTaGAGCAAGCGGCCTGTCCGGGACTCCTCAGTTCACGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SEGAEGLSWDLDWIL*SKRPVRDSSVHAAV
Trigger: GACTGCAGCGTGAACTGAGGAGTCCCGGACAGGCCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGCCCCTTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675466.1
CDS CCA 90 bp CGCAGACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRPAGASGRPWRYLP*ARGFLRSACSGAGR
Trigger: TCTGCCAGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488495.3
ENST00000674666.1
CDS CCA 90 bp CGCAGACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGGGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: RRPAGASGRPWRYLP*ARGFLRSACSGAAG
Trigger: ACCAGCAGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676154.1
CDS-3UTR CAA 90 bp GAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: EGTAGCPSCFPSNTLGPARRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...GGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGGAAGCAGGAGTGTCCGTaGTGGCCACGCCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: PLLCDLASLDPSSVRERWKQECP*WPRLTQ
Trigger: CTGGGTGAGGCGTGGCCACAACGGACACTCCTGCTT...CCATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CAA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAGACGGGTCCCATGAGTaGGCCGCCCGGGGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGDGSHE*AARGRR
Trigger: CCTTCGCCCCCGGGCGGCCAACTCATGGGACCCGTC...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS TCA 90 bp AGGGTGAAGATGATGGGCACTTCGGAAAGGCAGCTGGGCCGGAAGTaGTGGAGCAGGGTGACCAGGAGGGGCCCGATGTTGGCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RVKMMGTSERQLGRK*WSRVTRRGPMLASW
Trigger: CCAGCTGGCCAACATCGGGCCCCTCCTGGTCACCCTGCTCCATCACTTCCGGCCCAGCTGCCTTTCCGAAGTGCCCATCATCTTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS GCA 90 bp GAAGACGCAGACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: EDADQQVHQEGHGGI*PGPEAFSDQPAAGQ
Trigger: CTGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
ENST00000675066.1
CDS GCA 90 bp CTGCTTTCTCCTCTAGATACCCCTGGCCCTGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCATTCTCTTCCCGCGGCCGGATGGAGT +
Preference number: 5 (lower is better)
Translates to: LLSPLDTPGPGCCPP*LQGPSHSLPAAGWS
Trigger: ACTCCATCCGGCCGCGGGAAGAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCTAGAGGAGAAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
CDS GCA 90 bp GAAGACGCAGACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: EDADQQVHQEGHGGI*PGPEAFSDQPAAGL
Trigger: CAGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000488495.3
ENST00000674666.1
ENST00000676154.1
CDS CCA 90 bp CGCAGACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGGGCAGTGGTA +
Preference number: 5 (lower is better)
Translates to: RRPAGASGRPWRYLP*ARGFLRSACSGAVV
Trigger: TACCACTGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000645534.1
ENST00000675066.1
CDS CCA 90 bp GTGCCTGCAGGGCCCAAGTCATTCTCTTCCCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTGAGGAGGTCTTCCACGGAAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VPAGPKSFSSRGRME*RVTWSLRRSSTEAS
Trigger: GGAGGCTTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCTCCACTCCATCCGGCCGCGGGAAGAGAATGACTTGGGCCCTGCAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
CDS-3UTR CAA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCCCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGAGCAGAGTCACGGGGCTaGCGGGGCGAGCGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGAESRG*RGERRS
Trigger: GCTCCGGCGCTCGCCCCGCAAGCCCCGTGACTCTGC...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CAA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTCCGTTGGTGAGCGCGTaGACGAAGGCCACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPPLVSA*TKATRV
Trigger: TACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGG...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACGAGGGCAGCATGCCGTaGGTGAGCGCGTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHEGSMP*VSALTK
Trigger: CTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTC...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS GCA 90 bp CCATGGCGGTATCTGCCCTGGGCCAGAGGCTTTCTCAGATCAGCCTaGAGCGGGGCTGGCAGAGAAGGACACCAGGTGAGTAATTCCAGC +
Preference number: 5 (lower is better)
Translates to: PWRYLPWARGFLRSA*SGAGREGHQVSNSS
Trigger: GCTGGAATTACTCACCTGGTGTCCTTCTCTGCCAGCCCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488495.3
ENST00000674666.1
CDS CCA 90 bp AGCCCATTCCGAAGACGCAGACCAGCAGGTGCATCAGGAAGGCCATaGCGGTATCTGCCCTGGGCCAGAGGCTTTCTCAGATCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SPFRRRRPAGASGRP*RYLPWARGFLRSAC
Trigger: GCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTCTGCGTCTTCGGAATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 90 bp GAGTGTCCGTTGTGGCCACGCCTCACCCAGGAAACTCCTGAATCCTaGCAGCTCCTCCCCACGGTTCCCACACACGGAATTCCCTCACAG +
Preference number: 5 (lower is better)
Translates to: ECPLWPRLTQETPES*QLLPTVPTHGIPSQ
Trigger: CTGTGAGGGAATTCCGTGTGTGGGAACCGTGGGGAGGAGCTGCCAGGATTCAGGAGTTTCCTGGGTGAGGCGTGGCCACAACGGACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CAA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTACCCAGAGCCCATaGATGGTCACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHSTQSP*MVTQEP
Trigger: GGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGA...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTTCTACCCAGAGCCCATaGATGGTCACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPSTQSP*MVTQEP
Trigger: GGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGA...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGAGGGCAGCATGCCGTaGGTGAGCGCGTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSEGSMP*VSALTK
Trigger: CTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS CCA 90 bp TCTGATATCTCAGTGACATTGACGCAGGTAGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCGGGCAAGAGGCCGCTGAGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: SDISVTLTQVVRPEP*ARATRAGKRPLSPS
Trigger: TGAAGGACTCAGCGGCCTCTTGCCCGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS-3UTR CAA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTCTACCCAGAGCCCATaGATGGTCACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLSTQSP*MVTQEP
Trigger: GGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCCTTGCTCTGTGACCTGGCCTCTCTGGACCCCAGTTCCGTCCGTGAGCGATGGTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: PLLCDLASLDPSSVRERWSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...CCATCGCTCACGGACGGAACTGGGGTCCAGAGAGGCCAGGTCACAGAGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTCTCCCAGCACCTGGGTaGACGCTGGAGGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPLPAPG*TLEDKE
Trigger: TTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAG...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCTCCCAGCACCTGGGTaGACGCTGGAGGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: KGQPAVPAVSLLTPLGLPLPAPG*TLEDKE
Trigger: TTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAG...AGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTAACGAGGCAAGAGGGTaGGCCACAATGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PEGTAGCPSCFPSNTLGPNEARG*ATMLRV
Trigger: CACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTT...AGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: GRGVSQPFWPLLGCADCHKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...GTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS TCA 90 bp GTTGACGCTGGAGGACAAAGAACGCCACGAGGCAGCAGGCCATCATaGTGGATAGGAGGAGGAAGAAGACCAGGGGTGAGAAGTGGGCGG +
Preference number: 5 (lower is better)
Translates to: VDAGGQRTPRGSRPS*WIGGGRRPGVRSGR
Trigger: CCGCCCACTTCTCACCCCTGGTCTTCTTCCTCCTCCTATCCATCATGATGGCCTGCTGCCTCGTGGCGTTCTTTGTCCTCCAGCGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
CDS-3UTR CAA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGTCTACCCAGAGCCCATaGATGGTCACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPSTQSP*MVTQEP
Trigger: GGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGA...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFRRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AATGATGGTCAACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAAACGAGGCAAGAGGGTaGGCCACAATGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: NDGQRLGWTCHVPGTAPRNEARG*ATMLRV
Trigger: CACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTT...TCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGTTGACCATCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp TCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGGGCCTGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: SGPQPGRGVHFQRLRDGPGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...AGGCCCATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGCCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LPASRRVLTLQLVGFMGQPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...CTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 5 (lower is better)
Translates to: GTAGCPSCFPSNTLGPASCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...GGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: QPEGTAGCPSCFPSNTLGLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...CCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGAAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: PFWPLLGCADCHSCYYDGRRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...TCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AAGGGACAGCCGGCTGTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: KGQPAVPAVSLLTPLGLPSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...AGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGACAGCCGGCTGTCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CTGGCCTCAGCTACCTGCCTCTGCAATGTGGAGTGTGCTGATCTCCAGGGGTCCTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: LASATCLCNVECADLQGSSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...GGACCCCTGGAGATCAGCACACTCCACATTGCAGAGGCAGGTAGCTGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp ACGCTTAGGCTGGACCTGCCACGTGCCAGGCACCGCTCCAAGAGCTTTATAGAACTCCCAGCACCTGGGTaGACGCTGGAGGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: TLRLDLPRARHRSKSFIELPAPG*TLEDKE
Trigger: TTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAG...TTCTATAAAGCTCTTGGAGCGGTGCCTGGCACGTGGCAGGTCCAGCCTAAGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp CTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGAAGGGTGACCTGGTCATaGAGGAGGTCTTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: LHVWSPTWSGSSLSEAQGRVTWS*RRSSTE
Trigger: TTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCT...TCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGAGGGCAGCATGCCGTaGGTGAGCGCGTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: CLHLREYFQGLCMSGPQPEGSMP*VSALTK
Trigger: CTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTC...AGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GAGGCCTACCAGTCACCTCGATTCCCTAAGCCTCCACTCCCAAATGAGGAAGGGAACGAGGCAAGAGGGTaGGCCACAATGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: EAYQSPRFPKPPLPNEEGNEARG*ATMLRV
Trigger: CACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTT...CCCTTCCTCATTTGGGAGTGGAGGCTTAGGGAATCGAGGTGACTGGTAGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CAA 90 bp AGGGCTTGCTTGATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAACGAGGCAAGAGGGTaGGCCACAATGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: RACLMRAAFSFCLRAMPVNEARG*ATMLRV
Trigger: CACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTT...CACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATCAAGCAAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: GRVSTLLATSRLCRLPLLKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTGCTGGACAGTGCAGATaGCAGAAGTCCGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGAGQCR*QKSADE
Trigger: CTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGC...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGCTCTGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: GSACLVPNLVGEFTFRGSGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...TGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp ATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCCAGTGGGCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: IEPHLAFPGAIFPTVPSGLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...CCCACTGGGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS TCA 90 bp TGCGATGTCAGTCTCCCTCGTGGGTACAGGGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGACGCAGGTAGTGAGACCGGAGCCCTG +
Preference number: 5 (lower is better)
Translates to: CDVSLPRGYRAWYAV*YLSDIDAGSETGAL
Trigger: CAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGACAGCGTACCAAGCCCTGTACCCACGAGGGAGACTGACATCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS GCA 90 bp ACGTGGCCTTTGGAGACCACTTCCTCTAGCCCTCCAGAGCCATTCTaGCATCTGTTTACCCCTTTGTCAGCTACCAGTGGCAGCCCACCT +
Preference number: 5 (lower is better)
Translates to: TWPLETTSSSPPEPF*HLFTPLSATSGSPP
Trigger: AGGTGGGCTGCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAATGGCTCTGGAGGGCTAGAGGAAGTGGTCTCCAAAGGCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS-3UTR CAA 90 bp GCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: ACLVPNLVGEFTFRGSGMSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...CATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGCCGTTGGTGAGCGCGTaGACGAAGGCCACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: SPLLPPFERILPGALHVWPLVSA*TKATRV
Trigger: TACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGG...CCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCGAGGGCAGCATGCCGTaGGTGAGCGCGTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPEGSMP*VSALTK
Trigger: CTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTC...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTAACGAGGCAAGAGGGTaGGCCACAATGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGNEARG*ATMLRV
Trigger: CACCCTCAGCATTGTGGCCAACCCTCTTGCCTCGTT...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCCCACCAGCAAATCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: PHQQIISPGFQEGTYSPTKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...AGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGATTTGCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGCCCAGGACCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: RLPLLLLRWTVRSAGGPGPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...TCCTGGGCCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp ATGACTTTCCCAAGGTCACACAGCCTGAAGGGACAGCCGGCTGTCCCAGCTGTTCTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: MTFPRSHSLKGQPAVPAVLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...AACAGCTGGGACAGCCGGCTGTCCCTTCAGGCTGTGTGACCTTGGGAAAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQRRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CTTCCCCACAGTCCCCAGTGGGCACTTGCGTTCATGATTCAATTACTCAGGCTCCTCCCAGCACCTGGGTaGACGCTGGAGGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: LPHSPQWALAFMIQLLRLLPAPG*TLEDKE
Trigger: TTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAG...GAGCCTGAGTAATTGAATCATGAACGCAAGTGCCCACTGGGGACTGTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTAGGGTGACCTGGTCATaGAGGAGGTCTTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGRVTWS*RRSSTE
Trigger: TTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCT...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGAAAGGGTGACCTGGTCATaGAGGAGGTCTTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: PASRRVLTLQLVGFMGQERVTWS*RRSSTE
Trigger: TTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCT...TTCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GAAAATCCAGCTTCCTGGCAAGCTTTCTGTCAAGCTCTTCTGTCCTCACTGTCCGAGGGCAGCATGCCGTaGGTGAGCGCGTTGACGAAG +
Preference number: 5 (lower is better)
Translates to: ENPASWQAFCQALLSSLSEGSMP*VSALTK
Trigger: CTTCGTCAACGCGCTCACCAACGGCATGCTGCCCTC...GGACAGTGAGGACAGAAGAGCTTGACAGAAAGCTTGCCAGGAAGCTGGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp GTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGATCAGCAGGTGGGCTGGACAGTGCAGATaGCAGAAGTCCGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: VVQTATLVTTMDCQISRWAGQCR*QKSADE
Trigger: CTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGC...CCACCTGCTGATCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 5 (lower is better)
Translates to: QGRVSTLLATSRLCRLPLCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...GAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTCCCAGCTGTTTCCCTTCTAACACCCTTGGGCCTGCCTCCAGCTAGATGCTGCTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 5 (lower is better)
Translates to: VPAVSLLTPLGLPPARCCCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...GCAGCATCTAGCTGGAGGCAGGCCCAAGGGTGTTAGAAGGGAAACAGCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CTGAGGGGCAAAGGAGAGAGGGCAGGGGCGTGTCTCAACCCTTCTGGCCACTTCTCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: LRGKGERAGACLNPSGHFSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...GAAGTGGCCAGAAGGGTTGAGACACGCCCCTGCCCTCTCTCCTTTGCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNRRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCAGGAGGGGCCCGATGTaGGCCAGCTGGATGACCACC +
Preference number: 5 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSRRGPM*ASWMTT
Trigger: GGTGGTCATCCAGCTGGCCAACATCGGGCCCCTCCT...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp TGCATGTCTGGTCCCCAACCTGGTCGGGGAGTTCACTTTCAGAGGCTCAGGGATGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: CMSGPQPGRGVHFQRLRDDISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...ATCCCTGAGCCTCTGAAAGTGAACTCCCCGACCAGGTTGGGGACCAGACATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCTCCCAGCACCTGGGTaGACGCTGGAGGACAAAGAA +
Preference number: 5 (lower is better)
Translates to: FLLPPCHACEVVGTYWNPLPAPG*TLEDKE
Trigger: TTCTTTGTCCTCCAGCGTCAACCCAGGTGCTGGGAG...GGGATTCCAGTAAGTACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACACCGTTGGTGAGCGCGTaGACGAAGGCCACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETPLVSA*TKATRV
Trigger: TACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGG...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAACCGTTGGTGAGCGCGTaGACGAAGGCCACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: VLTGIPTACMKKQAQRSQPLVSA*TKATRV
Trigger: TACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGG...TTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGAGCTGGACAGTGCAGATaGCAGAAGTCCGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRAGQCR*QKSADE
Trigger: CTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGC...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TGTGACACAGAGTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: CDTELGIEPHLAFPGAIFGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...GAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAACTCTGTGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 5 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AGGATGACAGGAAGGGGTGTGTGGGGTACTACGTCCCTCCACACTGAGAATCCGCTCTGTTGCCTCCATTaGAGAGAATACTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RMTGRGVWGTTSLHTENPLCCLH*REYFQG
Trigger: CCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG...CGGATTCTCAGTGTGGAGGGACGTAGTACCCCACACACCCCTTCCTGTCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS CCA 90 bp AACTCCATACTTCTTCCTTCTAGTACAAAGCAGGAGTGTCCGTTGTaGCCACGCCTCACCCAGGAAACTCCTGAATCCTGGCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NSILLPSSTKQECPL*PRLTQETPESWQLL
Trigger: GAGGAGCTGCCAGGATTCAGGAGTTTCCTGGGTGAGGCGTGGCCACAACGGACACTCCTGCTTTGTACTAGAAGGAAGAAGTATGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS-3UTR CAA 90 bp GGCGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: GVSQPFWPLLGCADCHSCDISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...ACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CGTGTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTAAGGGTGACCTGGTCATaGAGGAGGTCTTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: RVSTLLATSRLCRLPLLLRVTWS*RRSSTE
Trigger: TTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCT...TAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCCCGTTGGTGAGCGCGTaGACGAAGGCCACCAGGGTA +
Preference number: 5 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSPLVSA*TKATRV
Trigger: TACCCTGGTGGCCTTCGTCAACGCGCTCACCAACGG...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp GCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGATGGACTGTCAGAAAGAGCCGCAGCACGTaGACCAGAGGGAACATGAGC +
Preference number: 5 (lower is better)
Translates to: ATSRLCRLPLLLLRWTVRKSRST*TRGNMS
Trigger: GCTCATGTTCCCTCTGGTCAACGTGCTGCGGCTCTT...TCTGACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AACAATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGCCCAGGAGGGCTTGCTaGATGCGGGCTGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: NNHLCCLHLREYFQGLCMPRRAC*MRAAFS
Trigger: GGAAAAAGCAGCCCGCATCAAGCAAGCCCTCCTGGG...CATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GATGCGGGCTGCTTTTTCCTTTTGCCTCCGTGCCATGCCTGTGAGGTAGTTGGTTGCAGACTGCCACTCTaGTTACTACGATGGACTGTC +
Preference number: 5 (lower is better)
Translates to: DAGCFFLLPPCHACEVVGCRLPL*LLRWTV
Trigger: GACAGTCCATCGTAGTAACAAGAGTGGCAGTCTGCA...ACCAACTACCTCACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCCCGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTTGGGGATAGAGCCGCACCTTGCATTTCCAGGTGCCATCTTCCCCACAGTCCCTCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: VGDRAAPCISRCHLPHSPSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...GGGACTGTGGGGAAGATGGCACCTGGAAATGCAAGGTGCGGCTCTATCCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGGTCCCCAACCTGGTCGGCTCTGTTGCCTCCATTaGAGAGAATACTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: HLREYFQGLCMSGPQPGRLCCLH*REYFQG
Trigger: CCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG...CCGACCAGGTTGGGGACCAGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCCTCCAAATCGGAGTTTaGCAAGGCTGCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPALQIGV*QGCMTS
Trigger: GGAGGTCATGCAGCCTTGCAAAACTCCGATTTGGAG...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATTCTACCCAGAGCCCATaGATGGTCACCCAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNSTQSP*MVTQEP
Trigger: GGGCTCCTGGGTGACCATCAATGGGCTCTGGGTAGA...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AAATGTCAAGATCCCAAGGTGGTAGTTCTCCTACAGGGGTCTGAAGCCCCTGCCGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: KCQDPKVVVLLQGSEAPADISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...GGCAGGGGCTTCAGACCCCTGTAGGAGAACTACCACCTTGGGATCTTGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp TCATCTCTCCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGTCGTGGGTACAGGGCTaGGTACGCTGTCTGATATCT +
Preference number: 5 (lower is better)
Translates to: SSLPASRRVLTLQLVGFMSWVQG*VRCLIS
Trigger: AGATATCAGACAGCGTACCAAGCCCTGTACCCACGA...CATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGGAGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATGCTGGACAGTGCAGATaGCAGAAGTCCGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNAGQCR*QKSADE
Trigger: CTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGC...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGACTGGCCACTTCTAGGTaGTGCAGACTGCCACTCTTG +
Preference number: 5 (lower is better)
Translates to: STLLATSRLCRLPLLLLRLATSR*CRLPLL
Trigger: CAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAG...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCCGGCTTCCAGGAGGGTACTTACTCTCCAACTAGTGGGCTTTATGGGCCAGGATCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: PGFQEGTYSPTSGLYGPGSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...TCCTGGCCCATAAAGCCCACTAGTTGGAGAGTAAGTACCCTCCTGGAAGCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCAGTTCTACTGTTTAAGCTGAGACTCGCCTCTGAGCCTCCAAATCGGAGTTTTGTCCTGGCAGCTGGCTaGTTGCTGCTAGGAGCATCT +
Preference number: 5 (lower is better)
Translates to: PVLLFKLRLASEPPNRSFVLAAG*LLLGAS
Trigger: AGATGCTCCTAGCAGCAACAAGCCAGCTGCCAGGAC...AAAACTCCGATTTGGAGGCTCAGAGGCGAGTCTCAGCTTAAACAGTAGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCCTTCCTCACAGGTCCTaGTCCCTGGGGTCCCAATCT +
Preference number: 5 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSLPHRS*SLGSQS
Trigger: AGATTGGGACCCCAGGGACAAGGACCTGTGAGGAAG...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp TCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACGAGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: STLLATSRLCRLPLLLLRDISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...TCGTAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp CCGATAAATATCCCTGAGGCACAGAGAACTGAAGTGACTTGTCTTACACACAGCAGGGTGACCTGGTCATaGAGGAGGTCTTCCACGGAA +
Preference number: 5 (lower is better)
Translates to: PINIPEAQRTEVTCLTHSRVTWS*RRSSTE
Trigger: TTCCGTGGAAGACCTCCTCAATGACCAGGTCACCCT...GCTGTGTGTAAGACAAGTCACTTCAGTTCTCTGTGCCTCAGGGATATTTATCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675066.1
CDS-3UTR CAA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATGGCTGCTTTTTCCTTTaGCCTCCGTGCCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNGCFFL*PPCHAC
Trigger: ACAGGCATGGCACGGAGGCAAAAGGAAAAAGCAGCC...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GTCTCAACCCTTCTGGCCACTTCTAGGTTGTGCAGACTGCCACTCTTGTTACTACTCTGTTGCCTCCATTaGAGAGAATACTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VSTLLATSRLCRLPLLLLLCCLH*REYFQG
Trigger: CCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG...TAGTAACAAGAGTGGCAGTCTGCACAACCTAGAAGTGGCCAGAAGGGTTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSDISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AATCCGAAAGCCAAGATGCCCAAGATTCTATCGTTATCTGCTTGTCTTGTAGAAGCTGGACAGTGCAGATaGCAGAAGTCCGCGGACGAG +
Preference number: 5 (lower is better)
Translates to: NPKAKMPKILSLSACLVEAGQCR*QKSADE
Trigger: CTCGTCCGCGGACTTCTGCAATCTGCACTGTCCAGC...TTCTACAAGACAAGCAGATAACGATAGAATCTTGGGCATCTTGGCTTTCGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp AATCACCTCTGTTGCCTCCATTTGAGAGAATACTTCCAGGGGCTCTGCATGTCTCTCTGTTGCCTCCATTaGAGAGAATACTTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: NHLCCLHLREYFQGLCMSLCCLH*REYFQG
Trigger: CCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAG...AGACATGCAGAGCCCCTGGAAGTATTCTCTCAAATGGAGGCAACAGAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS CCA 90 bp TCCAGAGCCATTCTGCCATCTGTTTACCCCTTTGTCAGCTACCAGTaGCAGCCCACCTGTGCTGTTACTAACAACTTTCTTCTATCTATC +
Preference number: 5 (lower is better)
Translates to: SRAILPSVYPFVSYQ*QPTCAVTNNFLLSI
Trigger: GATAGATAGAAGAAAGTTGTTAGTAACAGCACAGGTGGGCTGCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAATGGCTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS-3UTR CAA 90 bp ACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCAAATGATATCTCAGTGACATaGACGCAGGTAGTGAGACCG +
Preference number: 5 (lower is better)
Translates to: TYWNPHCMHEETGTEKPNDISVT*TQVVRP
Trigger: CGGTCTCACTACCTGCGTCAATGTCACTGAGATATC...ATTTGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACAGGCACAGAGAAGCCATCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: GTYWNPHCMHEETGTEKPSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...TGGCTTCTCTGTGCCTGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS-3UTR CAA 90 bp GCCTGTGAGGTAGTTGGTACTTACTGGAATCCCCACTGCATGCATGAAGAAACATCTATCGTTATCTGCTaGTCTTGTAGAAGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: ACEVVGTYWNPHCMHEETSIVIC*SCRSPS
Trigger: AGAGGGGCTTCTACAAGACAAGCAGATAACGATAGA...TGTTTCTTCATGCATGCAGTGGGGATTCCAGTAAGTACCAACTACCTCACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
CDS GCA 72 bp CCTCTAGATACCCCTGGCCCTGGCTGCTGTCCACCGTaGCTGCAGGGCCCAAGTCATTCTCTTCCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: PLDTPGPGCCPP*LQGPSHSLPAA
Trigger: GGCCGCGGGAAGAGAATGACTTGGGCCCTGCAGGCACGGTGGACAGCAGCCAGGGCCAGGGGTATCTAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
CDS GCA 72 bp GGCGGGAAGGTAGCGGCTCTCCAGGTGGGACAAGGGTaGTTCCATTCCGGGGAGGGCGGACACCAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: GGKVAALQVGQG*FHSGEGGHQSS
Trigger: AGAGCTTTGGTGTCCGCCCTCCCCGGAATGGAAGCACCCTTGTCCCACCTGGAGAGCCGCTACCTTCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp TGGGAGACGAGGTCCGAAGGGGCAGAGGGGCTCTCCTaGGATCTGGACTGGATCCTCTGCAGCAAGCGGCCT +
Preference number: 6 (lower is better)
Translates to: WETRSEGAEGLS*DLDWILCSKRP
Trigger: AGGCCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGCCCCTTCGGACCTCGTCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675466.1
CDS CCA 72 bp TCAGTGACATTGACGCAGGTAGTGAGACCGGAGCCCTaGGCAAGAGCCACCAGGGCGGGCAAGAGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SVTLTQVVRPEP*ARATRAGKRPL
Trigger: CAGCGGCCTCTTGCCCGCCCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS GCA 72 bp GCAGAGGGGCTCTCCTGGGATCTGGACTGGATCCTCTaGAGCAAGCGGCCTGTCCGGGACTCCTCAGTTCAC +
Preference number: 6 (lower is better)
Translates to: AEGLSWDLDWIL*SKRPVRDSSVH
Trigger: GTGAACTGAGGAGTCCCGGACAGGCCGCTTGCTGCAGAGGATCCAGTCCAGATCCCAGGAGAGCCCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675466.1
CDS CCA 72 bp GCAGGTGCATCAGGAAGGCCATGGCGGTATCTGCCCTaGGCCAGAGGCTTTCTCAGATCAGCCTGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: AGASGRPWRYLP*ARGFLRSACSG
Trigger: CCCGCTGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp GGGCCCAAGTCATTCTCTTCCCGCGGCCGGATGGAGTaGAGGGTGACCTGGTCATTGAGGAGGTCTTCCACG +
Preference number: 6 (lower is better)
Translates to: GPKSFSSRGRME*RVTWSLRRSST
Trigger: CGTGGAAGACCTCCTCAATGACCAGGTCACCCTCCACTCCATCCGGCCGCGGGAAGAGAATGACTTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
CDS GCA 72 bp GACCAGCAGGTGCATCAGGAAGGCCATGGCGGTATCTaGCCTGGGCCAGAGGCTTTCTCAGATCAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: DQQVHQEGHGGI*PGPEAFSDQPA
Trigger: TGCAGGCTGATCTGAGAAAGCCTCTGGCCCAGGGCAGATACCGCCATGGCCTTCCTGATGCACCTGCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000674666.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp GCCAGGAAGAAGGTGAGGACCAAGAAGGCGATGCTGTaGTGGCCGTCCAGCACCCAGGAGGTCATATTCCAG +
Preference number: 6 (lower is better)
Translates to: ARKKVRTKKAML*WPSSTQEVIFQ
Trigger: CTGGAATATGACCTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCCTCACCTTCTTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CAA 90 bp CTCGTGGGTACAGGGCTTGGTACGCTGTCTGATATCTCAGTGACATaGACGCAGGTAGTGAGACCGGAGCCCTGGGCAAGAGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: LVGTGLGTLSDISVT*TQVVRPEPWARATR
Trigger: CCTGGTGGCTCTTGCCCAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGACAGCGTACCAAGCCCTGTACCCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp AGGAAGAAGGTGAGGACCAAGAAGGCGATGCTGTGGTaGCCGTCCAGCACCCAGGAGGTCATATTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: RKKVRTKKAMLW*PSSTQEVIFQR
Trigger: CCTCTGGAATATGACCTCCTGGGTGCTGGACGGCCACCACAGCATCGCCTTCTTGGTCCTCACCTTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp CTCTGGGAACTCCCTGTGCGATGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGCTGTCTGATATCTCAG +
Preference number: 6 (lower is better)
Translates to: LWELPVRCQSPS*VQGLVRCLISQ
Trigger: CTGAGATATCAGACAGCGTACCAAGCCCTGTACCCACGAGGGAGACTGACATCGCACAGGGAGTTCCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CCA 72 bp GAACAGCAGAGACCTGTGCGATGTCAGTCTCCCTCGTaGGTACAGGGCTTGGTACGCTGTCTGATATCTCAG +
Preference number: 6 (lower is better)
Translates to: EQQRPVRCQSPS*VQGLVRCLISQ
Trigger: CTGAGATATCAGACAGCGTACCAAGCCCTGTACCCACGAGGGAGACTGACATCGCACAGGTCTCTGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473664.2
CDS CAA 72 bp ACAGGGCTTGGTACGCTGTCTGATATCTCAGTGACATaGACGCAGGTAGTGAGACCGGAGCCCTGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: TGLGTLSDISVT*TQVVRPEPWAR
Trigger: TCTTGCCCAGGGCTCCGGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGACAGCGTACCAAGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS CAA 72 bp AGCCCTCCAGAGCCATTCTGCCATCTGTTTACCCCTTaGTCAGCTACCAGTGGCAGCCCACCTGTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: SPPEPFCHLFTP*SATSGSPPVLL
Trigger: TAACAGCACAGGTGGGCTGCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAATGGCTCTGGAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS TCA 72 bp AGTCTCCCTCGTGGGTACAGGGCTTGGTACGCTGTCTaGTATCTCAGTGACATTGACGCAGGTAGTGAGACC +
Preference number: 6 (lower is better)
Translates to: SLPRGYRAWYAV*YLSDIDAGSET
Trigger: GGTCTCACTACCTGCGTCAATGTCACTGAGATATCAGACAGCGTACCAAGCCCTGTACCCACGAGGGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217254.11
ENST00000381944.5
ENST00000473664.2
ENST00000488495.3
ENST00000645534.1
ENST00000675066.1
ENST00000676154.1
CDS GCA 72 bp TTGGAGACCACTTCCTCTAGCCCTCCAGAGCCATTCTaGCATCTGTTTACCCCTTTGTCAGCTACCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LETTSSSPPEPF*HLFTPLSATSG
Trigger: GCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAATGGCTCTGGAGGGCTAGAGGAAGTGGTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS CAA 90 bp ACTTCCTCTAGCCCTCCAGAGCCATTCTGCCATCTGTTTACCCCTTaGTCAGCTACCAGTGGCAGCCCACCTGTGCTGTTACTAACAACT +
Preference number: 6 (lower is better)
Translates to: TSSSPPEPFCHLFTP*SATSGSPPVLLLTT
Trigger: AGTTGTTAGTAACAGCACAGGTGGGCTGCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAATGGCTCTGGAGGGCTAGAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS CAA 90 bp TTTAACTCCATACTTCTTCCTTCTAGTACAAAGCAGGAGTGTCCGTaGTGGCCACGCCTCACCCAGGAAACTCCTGAATCCTGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: FNSILLPSSTKQECP*WPRLTQETPESWQL
Trigger: GAGCTGCCAGGATTCAGGAGTTTCCTGGGTGAGGCGTGGCCACAACGGACACTCCTGCTTTGTACTAGAAGGAAGAAGTATGGAGTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS CAA 72 bp ATACTTCTTCCTTCTAGTACAAAGCAGGAGTGTCCGTaGTGGCCACGCCTCACCCAGGAAACTCCTGAATCC +
Preference number: 6 (lower is better)
Translates to: ILLPSSTKQECP*WPRLTQETPES
Trigger: GGATTCAGGAGTTTCCTGGGTGAGGCGTGGCCACAACGGACACTCCTGCTTTGTACTAGAAGGAAGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381944.5
CDS CAA 72 bp TTTCCTCCTGAAATTATATCACTCTCTACGTGGCCTTaGGAGACCACTTCCTCTAGCCCTCCAGAGCCATTC +
Preference number: 6 (lower is better)
Translates to: FPPEIISLSTWP*ETTSSSPPEPF
Trigger: GAATGGCTCTGGAGGGCTAGAGGAAGTGGTCTCCAAAGGCCACGTAGAGAGTGATATAATTTCAGGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS CCA 72 bp ATTCTGCCATCTGTTTACCCCTTTGTCAGCTACCAGTaGCAGCCCACCTGTGCTGTTACTAACAACTTTCTT +
Preference number: 6 (lower is better)
Translates to: ILPSVYPFVSYQ*QPTCAVTNNFL
Trigger: AAGAAAGTTGTTAGTAACAGCACAGGTGGGCTGCCACTGGTAGCTGACAAAGGGGTAAACAGATGGCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS CAA 72 bp CTAAGGGTTACTGATCATTATCGTGAAATGGCAGGTTaGGTGACATCGTTATTTTTGTCTAATTCACATGAG +
Preference number: 6 (lower is better)
Translates to: LRVTDHYREMAG*VTSLFLSNSHE
Trigger: CTCATGTGAATTAGACAAAAATAACGATGTCACCAAACCTGCCATTTCACGATAATGATCAGTAACCCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675466.1
CDS TCA 72 bp GGGTTACTGATCATTATCGTGAAATGGCAGGTTTGGTaGCATCGTTATTTTTGTCTAATTCACATGAGAATT +
Preference number: 6 (lower is better)
Translates to: GLLIIIVKWQVW*HRYFCLIHMRI
Trigger: AATTCTCATGTGAATTAGACAAAAATAACGATGTCACCAAACCTGCCATTTCACGATAATGATCAGTAACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675466.1