RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC52A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132517

Ensembl transcript IDs: ENST00000254853.10, ENST00000424747.1, ENST00000512825.7, ENST00000573674.1, ENST00000575919.1

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCCCTGGCTCTaGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTC +
Preference number: 1 (lower is better)
Translates to: QALGPSPQPQPVPWL*AWSLVPTLASHANV
Trigger: GACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR CCA 90 bp AGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCCCTaGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCC +
Preference number: 1 (lower is better)
Translates to: RSQALGPSPQPQPVP*LWAWSLVPTLASHA
Trigger: GGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR CCA 90 bp CCCAACCTGTCCCCTGGCTCTGGGCCTGGTCTTTGGTGCCCACCCTaGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCAT +
Preference number: 1 (lower is better)
Translates to: PNLSPGSGPGLWCPP*PHMPTSSVECAGVH
Trigger: ATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR CCA 90 bp CTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: LVFGAHPGLTCQRLL*SVQVSMSVPVLGEA
Trigger: GGCTTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR TCA 90 bp CTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGGAAGCCTGCCTGGGCCACAAGTAGT +
Preference number: 1 (lower is better)
Translates to: LASHANVFCGVCRCP*AFLCWGKPAWATSS
Trigger: ACTACTTGTGGCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR GCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGGGCCTGGTCTTTGGTaGCCACCCTGGCCTCACATG +
Preference number: 2 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPGPGLW*PPWPHM
Trigger: CATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCC...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTCCTGTCCCCTGGCTCTaGGCCTGGTCTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: PWPHMPTSSVECAGVHERPVPWL*AWSLVP
Trigger: GGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGG...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR TCA 90 bp CACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: HKSHKGLRPWVQAHSPNLVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...CAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR TCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPVCRCP*AFLCWG
Trigger: CCCCCAACACAGGAACGCTCATGGACACCTGCACAC...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR TCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVVCRCP*AFLCWG
Trigger: CCCCCAACACAGGAACGCTCATGGACACCTGCACAC...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACTCTGGGCCTGGTCTTTaGTGCCCACCCTGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: KPAWATSSQALWQPHDEDSGPGL*CPPWPH
Trigger: GTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGA...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCCCCTGGCTCTGGGCCTaGTCTTTGGTGCCCACCCTG +
Preference number: 2 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPPWLWA*SLVPTL
Trigger: CAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGG...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCTGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCTCTGGGCCTGGTCTTTaGTGCCCACCCTGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPSGPGL*CPPWPH
Trigger: GTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGA...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR TCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCACACGTGGTAGATGCTaGTGGGAGGGAACATGGCAC +
Preference number: 2 (lower is better)
Translates to: KSHKGLRPWVQAHSPNLSTRGRC*WEGTWH
Trigger: GTGCCATGTTCCCTCCCACCAGCATCTACCACGTGT...GGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
3UTR-3UTR GCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGAAACACGTGGTAGATaGTGGTGGGAGGGAACATGG +
Preference number: 2 (lower is better)
Translates to: WAWSLVPTLASHANVFCGETRGR*WWEGTW
Trigger: CCATGTTCCCTCCCACCAGCATCTACCACGTGTTTC...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
3UTR-3UTR CCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGACACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: PTSSVECAGVHERSCVGGHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCCACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACAGTAGTCAGGCACTGTaGCAGCCTCACGATGAAGAC +
Preference number: 2 (lower is better)
Translates to: KPAWATSSQALWQPHDEDSSQAL*QPHDED
Trigger: GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACT...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCAGGGAGCCCACTTaGATGGCCACACCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: NTLLHKSHKGLRPWVQAHSREPT*MATPAA
Trigger: GGCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCT...GTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
3UTR-3UTR CCA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTAGTAGTCAGGCACTGTaGCAGCCTCACGATGAAGAC +
Preference number: 2 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVSSQAL*QPHDED
Trigger: GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACT...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACTGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: NTLLHKSHKGLRPWVQAHWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...GTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCTGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPCQRLL*SVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCA...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCTGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 2 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQAWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCTGGCTCTGGGCCTaGTCTTTGGTGCCCACCCTG +
Preference number: 2 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKPWLWA*SLVPTL
Trigger: CAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGG...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR GCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCACCCTGGCCTCACATaGCAACGTCTTCTGTGGAGT +
Preference number: 2 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKHPGLT*QRLLWS
Trigger: ACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR TCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 2 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGCACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGTGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATG +
Preference number: 2 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWCQRLL*SVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCA...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CAA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTCTCTGGGCCTGGTCTTaGGTGCCCACCCTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPLWAWS*VPTLAS
Trigger: TGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CAA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCTCTGGGCCTGGTCTTaGGTGCCCACCCTGGCCTCA +
Preference number: 3 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCLWAWS*VPTLAS
Trigger: TGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR CCA 72 bp TCCCCTGGCTCTGGGCCTGGTCTTTGGTGCCCACCCTaGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCA +
Preference number: 3 (lower is better)
Translates to: SPGSGPGLWCPP*PHMPTSSVECA
Trigger: TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR TCA 72 bp CATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGGAAGCCTGCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: HANVFCGVCRCP*AFLCWGKPAWA
Trigger: GGCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR GCA 72 bp CTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATaGCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATG +
Preference number: 3 (lower is better)
Translates to: LGLVFGAHPGLT*QRLLWSVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR CCA 72 bp ACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTaGGTCCAAGCCCACAGCCCCAACCTGTCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: TLLHKSHKGLRP*VQAHSPNLSPG
Trigger: GCCAGGGGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CAA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAATGAGCGTTCCTGTGTaGGGGGAAGCCTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTMSVPV*GEACLG
Trigger: GCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCAT...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CAA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGATGAGCGTTCCTGTGTaGGGGGAAGCCTGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKMSVPV*GEACLG
Trigger: GCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCAT...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
3UTR-3UTR CAA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAAAGCAGGGAGCCCACTaGGATGGCCACACCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQKQGAH*DGHTSC
Trigger: GCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCTT...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp CACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGCCACCCCTGCAGTGGTaGCCACCAGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HKSHKGLRPWVQAHSPNLPPLQW*PPGVGR
Trigger: CCTGCCCACCCCTGGTGGGCACCACTGCAGGGGTGG...CAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTACAGCGACCCAGCAGTaGCGGCAGGCAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSTATQQ*RQADRQ
Trigger: CTGCCTGTCTGCCTGCCGGCACTGCTGGGTCGCTGT...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGGGGAGGCCCAGAGGTaGCATTGGTGGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPGEAQR*HWWALV
Trigger: CACCAGCGCCCACCAATGGCACCTCTGGGCCTCCCC...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTTGGTCACGGCACTGGTaGAGGCCATCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSWSRHW*RPSGPA
Trigger: TGCTGGGCCTGATGGCCTTCACCAGTGCCGTGACCA...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCACAGCGACCCAGCAGTaGCGGCAGGCAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVTATQQ*RQADRQ
Trigger: CTGCCTGTCTGCCTGCCGGCACTGCTGGGTCGCTGT...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCACGGGGCACCGGCTGTaGGTTTGGGTACAGCGACCC +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVTGHRL*VWVQRP
Trigger: GGGTCGCTGTACCCAAACGCACAGCCGGTGCCCCGT...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp AGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACAGGGGAGGCCCAGAGGTaGCATTGGTGGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLPGPQVVRHCGSLTMKTGEAQR*HWWALV
Trigger: CACCAGCGCCCACCAATGGCACCTCTGGGCCTCCCC...TGTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGGGGAGGCCCAGAGGTaGCATTGGTGGGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSGEAQR*HWWALV
Trigger: CACCAGCGCCCACCAATGGCACCTCTGGGCCTCCCC...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTGCCAGGGATGGTGCCTaGTGCCTGGCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCARDGA*CLARWL
Trigger: GAGCCACCGAGCCAGGCAGCAGGCACCATCCCTGGC...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTGCCCTGCCAGGGACCTaGACAGCACGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCALPGT*TARPWP
Trigger: TGGCCATGGGCGTGCTGTGCAGGTCCCTGGCAGGGC...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGCCCTGCCAGGGACCTaGACAGCACGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSALPGT*TARPWP
Trigger: TGGCCATGGGCGTGCTGTGCAGGTCCCTGGCAGGGC...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGCCCAGAGGTGCCATTaGTGGGCGCTGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGAQRCH*WALVGT
Trigger: AGTGCCCACCAGCGCCCACCAATGGCACCTCTGGGC...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGCCCAGAGGTGCCATTaGTGGGCGCTGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LWAWSLVPTLASHANVFCAQRCH*WALVGT
Trigger: AGTGCCCACCAGCGCCCACCAATGGCACCTCTGGGC...ACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GCTGGTGGGAGGGAACATGGCACCGGCACCAAGCAGGGAGCCCACTTGGATGGCCACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGGREHGTGTKQGAHLDGHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...GCCATCCAAGTGGGCTCCCTGCTTGGTGCCGGTGCCATGTTCCCTCCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp ATGCTGGTGGGAGGGAACATGGCACCGGCACCAAGCAGGGAGCCCACTTGGATGTCTGGGCCTGGTCTTTaGTGCCCACCCTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: MLVGGNMAPAPSREPTWMSGPGL*CPPWPH
Trigger: GTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGA...CATCCAAGTGGGCTCCCTGCTTGGTGCCGGTGCCATGTTCCCTCCCACCAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCCTGTCCCCTGGCTCTaGGCCTGGTCTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVPVPWL*AWSLVP
Trigger: GGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGG...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTCCTGGGGATCCCAGTTaGAGTTCAGGCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LWAWSLVPTLASHANVFCPGDPS*SSGPEP
Trigger: GGGCTCAGGGCCTGAACTTCAACTGGGATCCCCAGG...ACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCTGGGCTGAGAACAGCTaGTGGGCCTCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVWAENS*WASGSG
Trigger: CCCAGACCCTGAGGCCCATCAGCTGTTCTCAGCCCA...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGAAGGCACCATGGGCTaGGAACAGCTGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSEGTMG*EQLMGL
Trigger: GAGGCCCATCAGCTGTTCTCAGCCCATGGTGCCTTC...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGGCCCGAGGTGCAGCTaGCCCAGAGGAGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECGPRCS*PRGAKR
Trigger: CCTCTTTGCTCCTCTGGGGCAGCTGCACCTCGGGCC...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTACGGGGCACCGGCTGTaGGTTTGGGTACAGCGACCC +
Preference number: 4 (lower is better)
Translates to: PWPHMPTSSVECAGVHERTGHRL*VWVQRP
Trigger: GGGTCGCTGTACCCAAACGCACAGCCGGTGCCCCGT...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTGCCAGGGATGGTGCCTaGTGCCTGGCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVARDGA*CLARWL
Trigger: GAGCCACCGAGCCAGGCAGCAGGCACCATCCCTGGC...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCGCCAGGGATGGTGCCTaGTGCCTGGCTCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSARDGA*CLARWL
Trigger: GAGCCACCGAGCCAGGCAGCAGGCACCATCCCTGGC...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAACCCACGACAGCACCTaGACAGCACGCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGTHDST*TARPWP
Trigger: TGGCCATGGGCGTGCTGTGCAGGTGCTGTCGTGGGT...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTAGACAGGCAGAAAGCTaGCCCGAGGTGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPRQAES*PEVQLP
Trigger: GGGCAGCTGCACCTCGGGCCAGCTTTCTGCCTGTCT...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp CCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCCCTGGCTCTGGGCCTaGTCTTTGGTGCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PPWPHMPTSSVECAGVHEPWLWA*SLVPTL
Trigger: CAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGG...CTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCCCCCAACCTGTCCCCTaGCTCTGGGCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KSHKGLRPWVQAHSPNLSPQPVP*LWAWSL
Trigger: CAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGGG...GGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCAAAGGTCTCAGGCCCTaGGTCCAAGCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVKGLRP*VQAHSP
Trigger: GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTT...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCCTGGGGATCCCAGTTaGAGTTCAGGCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: PPWPHMPTSSVECAGVHEPGDPS*SSGPEP
Trigger: GGGCTCAGGGCCTGAACTTCAACTGGGATCCCCAGG...CTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTGGGCTGAGAACAGCTaGTGGGCCTCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PWPHMPTSSVECAGVHERWAENS*WASGSG
Trigger: CCCAGACCCTGAGGCCCATCAGCTGTTCTCAGCCCA...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGGAAGGCACCATGGGCTaGGAACAGCTGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HKSHKGLRPWVQAHSPNLEGTMG*EQLMGL
Trigger: GAGGCCCATCAGCTGTTCTCAGCCCATGGTGCCTTC...CAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGTGGTCACGGCACTGGTaGAGGCCATCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPWPHMPTSSVECAGVHEWSRHW*RPSGPA
Trigger: TGCTGGGCCTGATGGCCTTCACCAGTGCCGTGACCA...CTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCTGGTCACGGCACTGGTaGAGGCCATCAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSWSRHW*RPSGPA
Trigger: TGCTGGGCCTGATGGCCTTCACCAGTGCCGTGACCA...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACGGGGCGTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDGAWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCACGCCCC...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACGGGCCTGGTCTTTGGTaGCCACCCTGGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDGPGLW*PPWPHM
Trigger: CATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCC...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGGGCCTGGTCTTTGGTaGCCACCCTGGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECGPGLW*PPWPHM
Trigger: CATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCC...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTCACCGGCTGTGCGTTTaGGTACAGCGACCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPHRLCV*VQRPSS
Trigger: ACTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTG...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGACACCGGCTGTGCGTTTaGGTACAGCGACCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGHRLCV*VQRPSS
Trigger: ACTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTG...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACCAGAGGTGCCATTGGTaGGCGCTGGTGGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDQRCHW*ALVGTR
Trigger: TCGAGTGCCCACCAGCGCCCACCAATGGCACCTCTG...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTCAGAGGTGCCATTGGTaGGCGCTGGTGGGCACTCGA +
Preference number: 4 (lower is better)
Translates to: PWPHMPTSSVECAGVHERQRCHW*ALVGTR
Trigger: TCGAGTGCCCACCAGCGCCCACCAATGGCACCTCTG...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCGCCCAGAGGTGCCATTaGTGGGCGCTGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPAQRCH*WALVGT
Trigger: AGTGCCCACCAGCGCCCACCAATGGCACCTCTGGGC...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAAGCAGGGAGCCCACTTaGATGGCCACACCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLWCPPWPHMPTSSVECASREPT*MATPAA
Trigger: GGCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCT...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCAGCAGGGAGCCCACTTaGATGGCCACACCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSSREPT*MATPAA
Trigger: GGCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCT...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCCCCTGGCTCTGGGCCTaGTCTTTGGTGCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSPWLWA*SLVPTL
Trigger: CAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGG...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCCTGGCTCTGGGCCTaGTCTTTGGTGCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVPWLWA*SLVPTL
Trigger: CAGGGTGGGCACCAAAGACCAGGCCCAGAGCCAGGG...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCCCTGTCCCCTGGCTCTaGGCCTGGTCTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSPVPWL*AWSLVP
Trigger: GGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGG...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTAAAGGTCTCAGGCCCTaGGTCCAAGCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCKGLRP*VQAHSP
Trigger: GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTT...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCAAAGGTCTCAGGCCCTaGGTCCAAGCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSKGLRP*VQAHSP
Trigger: GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTT...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTTGGGCTGAGAACAGCTaGTGGGCCTCAGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPWAENS*WASGSG
Trigger: CCCAGACCCTGAGGCCCATCAGCTGTTCTCAGCCCA...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPWPHMPTSSVECAGVHEVCRCP*AFLCWG
Trigger: CCCCCAACACAGGAACGCTCATGGACACCTGCACAC...CTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAGCACTCTGGGAGGCTaGGATGGGCGGATCGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPSTLGG*DGRIAG
Trigger: TCCTGCGATCCGCCCATCTCAGCCTCCCAGAGTGCT...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTAAAGCTGGCCCGAGGTaGAGCTGCCCCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPKAGPR*SCPRGA
Trigger: TGCTCCTCTGGGGCAGCTGCACCTCGGGCCAGCTTT...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTTGGCTCGGTGGCTCCTaGAATGGCAAAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSWLGGS*NGKASS
Trigger: AGAAGAGGCTTTGCCATTGCAGGAGCCACCGAGCCA...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCGGGCCTGGTCTTTGGTaGCCACCCTGGCCTCACATG +
Preference number: 4 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPGPGLW*PPWPHM
Trigger: CATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCC...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGCCCTGAGCCCCCTGTaGTTACAGAGGGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGALSPL*LQRVVM
Trigger: CATCACTACCCTCTGTAACCACAGGGGGCTCAGGGC...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCGCCCTGAGCCCCCTGTaGTTACAGAGGGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVALSPL*LQRVVM
Trigger: CATCACTACCCTCTGTAACCACAGGGGGCTCAGGGC...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGACACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCATGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GLWCPPWPHMPTSSVECAWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTCCCCAACCTGTCCCCTaGCTCTGGGCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPPQPVP*LWAWSL
Trigger: CAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGGG...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACACACCGTGCTCCAGCCTaGGTGAAAGAGCGAGACCCT +
Preference number: 4 (lower is better)
Translates to: SLPGPQVVRHCGSLTMKTHRAPA*VKERDP
Trigger: AGGGTCTCGCTCTTTCACCCAGGCTGGAGCACGGTG...TGTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGTAGTCCCAGCACTCTaGGAGGCTGAGATGGGCGGA +
Preference number: 4 (lower is better)
Translates to: GLWCPPWPHMPTSSVECAVVPAL*EAEMGG
Trigger: TCCGCCCATCTCAGCCTCCCAGAGTGCTGGGACTAC...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR TCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGATTGAAGTTCAGGCCCTaGGCCCCCTGTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGLKFRP*APCGYR
Trigger: TCTGTAACCACAGGGGGCTCAGGGCCTGAACTTCAA...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVVCRCP*AFLCWG
Trigger: CCCCCAACACAGGAACGCTCATGGACACCTGCACAC...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAGTGTGCAGGTGTCCATaGGCGTTCCTGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGVCRCP*AFLCWG
Trigger: CCCCCAACACAGGAACGCTCATGGACACCTGCACAC...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACGGCAGGAGAATTGCTTaGACCCGGGAGGCGGAGATT +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDGRRIA*TREAEI
Trigger: AATCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCC...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGACCAAGATCACACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGTGATCTTGG...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp ATGCTGGTGGGAGGGAACATGGCACCGGCACCAAGCAGGGAGCCCACTTGGATGGGTACAACAGGCCATTaGCAACACCAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: MLVGGNMAPAPSREPTWMGTTGH*QHQGQS
Trigger: ACTCTGGCCTTGGTGTTGGCAATGGCCTGTTGTACC...CATCCAAGTGGGCTCCCTGCTTGGTGCCGGTGCCATGTTCCCTCCCACCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTAGGCCCCAAAGAGCATaGCCAGCAGAGAAAGACCAA +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSRPQRA*PAEKDQ
Trigger: TTGGTCTTTCTCTGCTGGGCATGCTCTTTGGGGCCT...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCACCCTGGCCTCACATaGCAACGTCTTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVHPGLT*QRLLWS
Trigger: ACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGACACCCTGGCCTCACATaGCAACGTCTTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGHPGLT*QRLLWS
Trigger: ACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCTCTGGTGCCACTTaGAACCCTAGCGCTTTTGCG +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPVSGAT*NPSAFA
Trigger: CGCAAAAGCGCTAGGGTTGCAAGTGGCACCAGAGAC...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424747.1
CDS-3UTR CCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTACGCTCACCCTCAAATaGACCCCGGGACAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPTLTLK*TPGQGH
Trigger: GTGCCCTTGTCCCGGGGTCCATTTGAGGGTGAGCGT...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTAGCTGGTCGTGGTGGTaGGTGCCAGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECSWSWW*VPVIPA
Trigger: AGCTGGGATTACTGGCACCCACCACCACGACCAGCT...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp ATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGAGACAGGCAGAAAGCTaGCCCGAGGTGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MPTSSVECAGVHERSCVGRQAES*PEVQLP
Trigger: GGGCAGCTGCACCTCGGGCCAGCTTTCTGCCTGTCT...CCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGAGGCTCCAACCCTCTaGAAGGTCTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSEAPTL*KVFYHH
Trigger: GTGGTGGTAAAAGACCTTCCAGAGGGTTGGAGCCTC...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTGCCCTGAGCCCCCTGTaGTTACAGAGGGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCALSPL*LQRVVM
Trigger: CATCACTACCCTCTGTAACCACAGGGGGCTCAGGGC...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTACACGTGGTAGATGCTaGTGGGAGGGAACATGGCAC +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPTRGRC*WEGTWH
Trigger: GTGCCATGTTCCCTCCCACCAGCATCTACCACGTGT...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTCACGATGAAGACAGGTaGGGTGGAGTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECHDEDR*GGVGSP
Trigger: TGGGGACCCAACTCCACCCCACCTGTCTTCATCGTG...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGATGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGCCCCAACCTGTCCCCTaGCTCTGGGCCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: MPTSSVECAGVHERSCVGPQPVP*LWAWSL
Trigger: CAAAGACCAGGCCCAGAGCCAGGGGACAGGTTGGGG...CCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCCGAGCAAAGAGGGAGCTaGTTTTCCTACCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: KSHKGLRPWVQAHSPNLSEQRGS*FSYPQR
Trigger: CCTCTGTGGGTAGGAAAATCAGCTCCCTCTTTGCTC...GGACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTCCGGAAGGTGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECPEGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCACCTTCCGG...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACCTTCTCTTCCTCCTCTaGTCCTGGGGATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDLLFLL*SWGSQL
Trigger: CAACTGGGATCCCCAGGAGCAGAGGAGGAAGAGAAG...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGGGTCACACCACCGTaGTCCAGCCTGGGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: MPTSSVECAGVHERSCVGGVTPP*SSLGER
Trigger: TCTTTCACCCAGGCTGGAGCACGGTGGTGTGACCCC...CCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCAT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp GCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTATTAGCTGGTCGTGGTaGTGGGTGCCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: AQIPQRSQALGPSPQPQPISWSW*WVPVIP
Trigger: TGGGATTACTGGCACCCACCACCACGACCAGCTAAT...AGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTCGGTGGCTCCTGCAATaGCAAAGCCTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PWPHMPTSSVECAGVHERRWLLQ*QSLFFL
Trigger: GAGGAAGAAGAGGCTTTGCCATTGCAGGAGCCACCG...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACAACACGTGGTAGATGCTaGTGGGAGGGAACATGGCAC +
Preference number: 4 (lower is better)
Translates to: SLPGPQVVRHCGSLTMKTTRGRC*WEGTWH
Trigger: GTGCCATGTTCCCTCCCACCAGCATCTACCACGTGT...TGTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGAGTAGTCAGGCACTGTaGCAGCCTCACGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: HKSHKGLRPWVQAHSPNLSSQAL*QPHDED
Trigger: GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACT...CAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAGGGAAACAGACAGGCTaGCAGGTAATAGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGGKQTG*QVIGTG
Trigger: CCCCGTGCCTATTACCTGCCAGCCTGTCTGTTTCCC...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424747.1
CDS-3UTR TCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACCTGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDLRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAG...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR TCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCTGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCLRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAG...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR TCA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGAGCAAAGAGGGAGCTaGTTTTCCTACCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: GLWCPPWPHMPTSSVECAEQRGS*FSYPQR
Trigger: CCTCTGTGGGTAGGAAAATCAGCTCCCTCTTTGCTC...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR TCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTGGTTCTTCTGGAAACTaGAGACCTTCTAGCACGGGG +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCGSSGN*RPSSTG
Trigger: CCCCGTGCTAGAAGGTCTTCAGTTTCCAGAAGAACC...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254853.10
CDS-3UTR TCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCTTGAAGTTCAGGCCCTaGGCCCCCTGTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPLKFRP*APCGYR
Trigger: TCTGTAACCACAGGGGGCTCAGGGCCTGAACTTCAA...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAAAAGCTGGCCCGAGGTaGAGCTGCCCCAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTKAGPR*SCPRGA
Trigger: TGCTCCTCTGGGGCAGCTGCACCTCGGGCCAGCTTT...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCCTTCTCTTCCTCCTCTaGTCCTGGGGATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSLLFLL*SWGSQL
Trigger: CAACTGGGATCCCCAGGAGCAGAGGAGGAAGAGAAG...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGATGGCTCGGTGGCTCCTaGAATGGCAAAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGWLGGS*NGKASS
Trigger: AGAAGAGGCTTTGCCATTGCAGGAGCCACCGAGCCA...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGATTGGGCATGCTGATGTaGACCTATAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: WAWSLVPTLASHANVFCGLGMLM*TYSPSY
Trigger: GTAGCTGGGACTATAGGTGCACATCAGCATGCCCAA...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCCACTGCATTCCAGCCTaGGCGACAGAACGAGATTCG +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSHCIPA*ATERDS
Trigger: CGAATCTCGTTCTGTCGCCCAGGCTGGAATGCAGTG...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTAAAATTAGCTGGTCGTaGTGGTGGGTGCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSKISWS*WWVPVI
Trigger: GATTACTGGCACCCACCACCACGACCAGCTAATTTT...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACGAGGCTCCAACCCTCTaGAAGGTCTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: KPAWATSSQALWQPHDEDEAPTL*KVFYHH
Trigger: GTGGTGGTAAAAGACCTTCCAGAGGGTTGGAGCCTC...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTTTCCTCCTCTGCTCCTaGGGATCCCAGTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCFLLCS*GSQLKF
Trigger: GAACTTCAACTGGGATCCCCAGGAGCAGAGGAGGAA...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAACACGTGGTAGATGCTaGTGGGAGGGAACATGGCAC +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGTRGRC*WEGTWH
Trigger: GTGCCATGTTCCCTCCCACCAGCATCTACCACGTGT...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCAGTAGTCAGGCACTGTaGCAGCCTCACGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSSSQAL*QPHDED
Trigger: GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACT...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACATGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: SLPGPQVVRHCGSLTMKTCQRLL*SVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCA...TGTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTTGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECCQRLL*SVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCA...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: NTLLHKSHKGLRPWVQAHVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...GTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTAGGCCCCAAAGAGCATaGCCAGCAGAGAAAGACCAA +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPRPQRA*PAEKDQ
Trigger: TTGGTCTTTCTCTGCTGGGCATGCTCTTTGGGGCCT...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCGAAACACGTGGTAGATaGTGGTGGGAGGGAACATGG +
Preference number: 4 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPETRGR*WWEGTW
Trigger: CCATGTTCCCTCCCACCAGCATCTACCACGTGTTTC...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAACACTGCATTCCAGCCTaGGCGACAGAACGAGATTCG +
Preference number: 4 (lower is better)
Translates to: QRLLWSVQVSMSVPVLGEHCIPA*ATERDS
Trigger: CGAATCTCGTTCTGTCGCCCAGGCTGGAATGCAGTG...TTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAAAAACAGCTCAGCACTaGCCGGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTKTAQH*PGAVAH
Trigger: GTGAGCCACCGCACCCGGCCAGTGCTGAGCTGTTTT...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTTTCCTCCTCTGCTCCTaGGGATCCCAGTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPFLLCS*GSQLKF
Trigger: GAACTTCAACTGGGATCCCCAGGAGCAGAGGAGGAA...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAACGGTGGCTCCTGCAATaGCAAAGCCTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QRLLWSVQVSMSVPVLGERWLLQ*QSLFFL
Trigger: GAGGAAGAAGAGGCTTTGCCATTGCAGGAGCCACCG...TTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGATGCCAACGTCTTCTGTaGAGTGTGCAGGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGCQRLL*SVQVSM
Trigger: CATGGACACCTGCACACTCCACAGAAGACGTTGGCA...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAAGAAACACGTGGTAGATaGTGGTGGGAGGGAACATGG +
Preference number: 4 (lower is better)
Translates to: QRLLWSVQVSMSVPVLGEETRGR*WWEGTW
Trigger: CCATGTTCCCTCCCACCAGCATCTACCACGTGTTTC...TTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAAATTAGCTGGTCGTGGTaGTGGGTGCCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: QRLLWSVQVSMSVPVLGEISWSW*WVPVIP
Trigger: TGGGATTACTGGCACCCACCACCACGACCAGCTAAT...TTCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTAAAATTAGCTGGTCGTaGTGGTGGGTGCCAGTAATC +
Preference number: 4 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCKISWS*WWVPVI
Trigger: GATTACTGGCACCCACCACCACGACCAGCTAATTTT...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR TCA 90 bp GGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGGTTCTTCTGGAAACTaGAGACCTTCTAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLTCQRLLWSVQVSMSVPGSSGN*RPSSCP
Trigger: TGGACAGCTAGAAGGTCTTCAGTTTCCAGAAGAACC...AGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACACCGGAAGGTGGAGGTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTPEGGG*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAACCTCCACCTTCCGG...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCAAAACAGCTCAGCACTaGCCGGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQAKTAQH*PGAVAH
Trigger: GTGAGCCACCGCACCCGGCCAGTGCTGAGCTGTTTT...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCGGTCCAAAGATGCTTTaGTTCTTCTGGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVGPKML*FFWKLK
Trigger: CTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACC...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACACGGTGGCTCCTGCAATaGCAAAGCCTCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTRWLLQ*QSLFFL
Trigger: GAGGAAGAAGAGGCTTTGCCATTGCAGGAGCCACCG...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGGTACAACAGGCCATTaGCAACACCAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTGTTGH*QHQGQS
Trigger: ACTCTGGCCTTGGTGTTGGCAATGGCCTGTTGTACC...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp AACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACGGTACAACAGGCCATTaGCAACACCAAGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: NTLLHKSHKGLRPWVQAHGTTGH*QHQGQS
Trigger: ACTCTGGCCTTGGTGTTGGCAATGGCCTGTTGTACC...GTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGCCACCCCTGCAGTGGTaGCCACCAGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWPPLQW*PPGVGR
Trigger: CCTGCCCACCCCTGGTGGGCACCACTGCAGGGGTGG...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCAGCTGGTCGTGGTGGTaGGTGCCAGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQASWSWW*VPVIPA
Trigger: AGCTGGGATTACTGGCACCCACCACCACGACCAGCT...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCAATACAAAAATTAGCTaGTCGTGGTGGTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: WPHMPTSSVECAGVHERSNTKIS*SWWWVP
Trigger: TGGCACCCACCACCACGACCAGCTAATTTTTGTATT...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTCCAAAGATGCTTTaGTTCTTCTGGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: GLWCPPWPHMPTSSVECAGPKML*FFWKLK
Trigger: CTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACC...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp CCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGGTCCAAAGATGCTTTaGTTCTTCTGGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: PGLWCPPWPHMPTSSVECGPKML*FFWKLK
Trigger: CTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACC...ACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGTCTGGGCCTGGTCTTTaGTGCCCACCCTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKSGPGL*CPPWPH
Trigger: GTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGA...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAACCTGTCCCCTGGCTCTaGGCCTGGTCTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQPVPWL*AWSLVP
Trigger: GGGCACCAAAGACCAGGCCCAGAGCCAGGGGACAGG...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCTTGAAGTTCAGGCCCTaGGCCCCCTGTGGTTACAGA +
Preference number: 4 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQALKFRP*APCGYR
Trigger: TCTGTAACCACAGGGGGCTCAGGGCCTGAACTTCAA...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGGTGGCAGCCTCACGATaGAGACAGGTGGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKVAASR*RQVGWS
Trigger: ACTCCACCCCACCTGTCTTCATCGTGAGGCTGCCAC...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp AACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACGGTTCTTCTGGAAACTaGAGACCTTCTAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NTLLHKSHKGLRPWVQAHGSSGN*RPSSWR
Trigger: CCTCCAGCTAGAAGGTCTTCAGTTTCCAGAAGAACC...GTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424747.1
CDS-3UTR GCA 90 bp CACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGATTCTAATATTCCTTTaGATTAGCAGTACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HKSHKGLRPWVQAHSPNLILIFL*ISSTGV
Trigger: CACCCCTGTACTGCTAATGCAAAGGAATATTAGAAT...CAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGTGGGGGAAGCCTGCCTaGGCCACAAGTAGTCAGGCA +
Preference number: 4 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKWGKPA*ATSSQA
Trigger: TGCCTGACTACTTGTGGCCCAGGCAGGCTTCCCCCA...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCGAGGCTCCAACCCTCTaGAAGGTCTTTTACCACCAC +
Preference number: 4 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQAEAPTL*KVFYHH
Trigger: GTGGTGGTAAAAGACCTTCCAGAGGGTTGGAGCCTC...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGCCTGGGGATCCCAGTTaGAGTTCAGGCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWPGDPS*SSGPEP
Trigger: GGGCTCAGGGCCTGAACTTCAACTGGGATCCCCAGG...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp ATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGTGGCTCGGTGGCTCCTaGAATGGCAAAGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IKTLYCTNPTKVSGPGSKWLGGS*NGKASS
Trigger: AGAAGAGGCTTTGCCATTGCAGGAGCCACCGAGCCA...CTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp CCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGGGAGCTCTTGTAACAGACTaGCAAGTTTCTTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: PTSSVECAGVHERSCVGGALVTD*QVSFTN
Trigger: ATTTGTGAAAGAAACTTGGCAGTCTGTTACAAGAGC...TCCCCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp CCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGAATCTCAAACCCTGCTaGTATAAATTGGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PPWPHMPTSSVECAGVHENLKPC*YKLVDE
Trigger: TTCATCTACCAATTTATAGCAGCAGGGTTTGAGATT...CTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGTCTGGGCCTGGTCTTTaGTGCCCACCCTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWSGPGL*CPPWPH
Trigger: GTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGA...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR TCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGAAGGCACCATGGGCTaGGAACAGCTGATGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWEGTMG*EQLMGL
Trigger: GAGGCCCATCAGCTGTTCTCAGCCCATGGTGCCTTC...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAACTTCTCTTCCTCCTCTaGTCCTGGGGATCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQLLFLL*SWGSQL
Trigger: CAACTGGGATCCCCAGGAGCAGAGGAGGAAGAGAAG...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAACACCCTGGCCTCACATaGCAACGTCTTCTGTGGAGT +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQHPGLT*QRLLWS
Trigger: ACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCAATACAAAAATTAGCTaGTCGTGGTGGTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: KNTLLHKSHKGLRPWVQANTKIS*SWWWVP
Trigger: TGGCACCCACCACCACGACCAGCTAATTTTTGTATT...GGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAATTCCTCCTCTGCTCCTaGGGATCCCAGTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQFLLCS*GSQLKF
Trigger: GAACTTCAACTGGGATCCCCAGGAGCAGAGGAGGAA...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAAGTAGTCAGGCACTGTaGCAGCCTCACGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQSSQAL*QPHDED
Trigger: GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACT...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR GCA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGCCAAGATCACACCACTaGATTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWPRSHH*IPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTGGTGTGATCTTGG...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR GCA 90 bp ACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAAAGAATCTCAAACCCTaGTGCTATAAATTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: TLYCTNPTKVSGPGSKPTKNLKP*CYKLVD
Trigger: ATCTACCAATTTATAGCAGCAGGGTTTGAGATTCTT...TGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR GCA 90 bp AATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAACCGAGATCATGTCATTaGATTCCAGACTGGACGACA +
Preference number: 4 (lower is better)
Translates to: NKNTLLHKSHKGLRPWVQPRSCH*IPDWTT
Trigger: TGTCGTCCAGTCTGGAATGCAATGACATGATCTCGG...TTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS GCA 90 bp AGGCACGGGGCACCGGCTGTGCGTTTGGGTACAGCGACCCAGCAGTaGCGGCAGGCAGACAGGCAGAAAGCTGGCCCGAGGTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHGAPAVRLGTATQQ*RQADRQKAGPRCSC
Trigger: GCAGCTGCACCTCGGGCCAGCTTTCTGCCTGTCTGCCTGCCGGCACTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTGCCCCGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424747.1
ENST00000575919.1
CDS-3UTR CAA 90 bp TGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGCACCGGCTGTGCGTTaGGGTACAGCGACCCAGCAG +
Preference number: 5 (lower is better)
Translates to: WAWSLVPTLASHANVFCGAPAVR*GTATQQ
Trigger: CTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTGC...TCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CAA 90 bp CTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTCTCTGGGCCTGGTCTTaGGTGCCCACCCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: LWAWSLVPTLASHANVFCLWAWS*VPTLAS
Trigger: TGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG...ACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp CAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTCAAGCAGGGAGCCCACTaGGATGGCCACACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QIPQRSQALGPSPQPQPVKQGAH*DGHTSC
Trigger: GCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCTT...GACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp CTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTATGAGCGTTCCTGTGTaGGGGGAAGCCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LWAWSLVPTLASHANVFCMSVPV*GEACLG
Trigger: GCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCAT...ACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCACTCTGGGCCTGGTCTTaGGTGCCCACCCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GLWCPPWPHMPTSSVECALWAWS*VPTLAS
Trigger: TGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp CACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCAAGCAGGGAGCCCACTaGGATGGCCACACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: HPGLTCQRLLWSVQVSMSKQGAH*DGHTSC
Trigger: GCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCTT...GCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCATGAGCGTTCCTGTGTaGGGGGAAGCCTGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPMSVPV*GEACLG
Trigger: GCCCAGGCAGGCTTCCCCCAACACAGGAACGCTCAT...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp ATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCTGTGTTGGGCTCTGGGCCTGGTCTTaGGTGCCCACCCTGGCCTCA +
Preference number: 5 (lower is better)
Translates to: MPTSSVECAGVHERSCVGLWAWS*VPTLAS
Trigger: TGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAG...CCCAACACAGGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTGAAGGCAGCACGCCATaGGTCACGGCACTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVEGSTP*VTALVK
Trigger: CTTCACCAGTGCCGTGACCAATGGCGTGCTGCCTTC...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp TGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTCCGAAGGCAGCACGCCATaGGTCACGGCACTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: WPHMPTSSVECAGVHERSEGSTP*VTALVK
Trigger: CTTCACCAGTGCCGTGACCAATGGCGTGCTGCCTTC...GGAACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp ACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAACCTGTAGGCAGGAGAATTGCTaGAACCCGGGAGGCGGAGAT +
Preference number: 5 (lower is better)
Translates to: TNPTKVSGPGSKPTAPTCRQENC*NPGGGD
Trigger: ATCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCT...ACAGGTTGGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CAA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTAGGCAGGAGATTCACTaGAACCCGGAAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PWPHMPTSSVECAGVHERRQEIH*NPEGGG
Trigger: ACCTCCACCTTCCGGGTTCAAGTGAATCTCCTGCCT...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CAA 90 bp CCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTGACCCGGGGTCCAAGTaGTCAAAACAGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: PWPHMPTSSVECAGVHERDPGSK*SKQLST
Trigger: AGTGCTGAGCTGTTTTGACAACTTGGACCCCGGGTC...ACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CAA 90 bp CCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGGTGTCCATGAGCGTTAGGCAGGAGATTCACTaGAACCCGGAAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PGLTCQRLLWSVQVSMSVRQEIH*NPEGGG
Trigger: ACCTCCACCTTCCGGGTTCAAGTGAATCTCCTGCCT...AACGCTCATGGACACCTGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CAA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCGACCCGGGGTCCAAGTaGTCAAAACAGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPDPGSK*SKQLST
Trigger: AGTGCTGAGCTGTTTTGACAACTTGGACCCCGGGTC...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000424747.1
CDS-3UTR CAA 90 bp GCTGGTGGGAGGGAACATGGCACCGGCACCAAGCAGGGAGCCCACTTGGATGGCCCCTGCTGCTATAAATaGGTAGATGAAGGAGGAATT +
Preference number: 5 (lower is better)
Translates to: AGGREHGTGTKQGAHLDGPCCYK*VDEGGI
Trigger: AATTCCTCCTTCATCTACCAATTTATAGCAGCAGGG...GCCATCCAAGTGGGCTCCCTGCTTGGTGCCGGTGCCATGTTCCCTCCCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CAA 90 bp GGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTGTGGAGTGTGCAGCCGAGATCATGTCATaGCATTCCAGACTGGACGAC +
Preference number: 5 (lower is better)
Translates to: GLWCPPWPHMPTSSVECAAEIMS*HSRLDD
Trigger: GTCGTCCAGTCTGGAATGCAATGACATGATCTCGGC...TGCACACTCCACAGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS-3UTR CAA 90 bp GGCTCTGGGCCTGGTCTTTGGTGCCCACCCTGGCCTCACATGCCAACGTCTTCTAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: GSGPGLWCPPWPHMPTSSRSKDA*VLLETE
Trigger: TTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCT...AGAAGACGTTGGCATGTGAGGCCAGGGTGGGCACCAAAGACCAGGCCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp AAGCCTGCCTGGGCCACAAGTAGTCAGGCACTGTGGCAGCCTCACGATGAAGACAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: KPAWATSSQALWQPHDEDRSKDA*VLLETE
Trigger: TTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCT...GTCTTCATCGTGAGGCTGCCACAGTGCCTGACTACTTGTGGCCCAGGCAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp TTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGGTCCAAGCCCACAGCCCCAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: LLHKSHKGLRPWVQAHSPRSKDA*VLLETE
Trigger: TTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCT...GGGGCTGTGGGCTTGGACCCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS-3UTR CAA 90 bp GTTTTAAATAAAAACACTTTATTGCACAAATCCCACAAAGGTCTCAGGCCCTGGAAGCAGGGAGCCCACTaGGATGGCCACACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VLNKNTLLHKSHKGLRPWKQGAH*DGHTSC
Trigger: GCAGCTGGTGTGGCCATCCAAGTGGGCTCCCTGCTT...CCAGGGCCTGAGACCTTTGTGGGATTTGTGCAATAAAGTGTTTTTATTTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000512825.7
CDS CCA 90 bp GTAGATGAAGGAGGAATTCAGTTACCAGAAGAGGAACAGAGGCACTaGGTAGGTAAAAGCAACAAGGGCTCATTACAAAGCTTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: VDEGGIQLPEEEQRH*VGKSNKGSLQSFSY
Trigger: ATAAGAAAAGCTTTGTAATGAGCCCTTGTTGCTTTTACCTACCCAGTGCCTCTGTTCCTCTTCTGGTAACTGAATTCCTCCTTCATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS GCA 90 bp TATTGGGTGAAACTGTATGACATAGCTGAGGCTCTTGTAACAGACTaGCAAGTTTCTTTCACAAATGGTGATTCTAATATTCCTTTGCAT +
Preference number: 5 (lower is better)
Translates to: YWVKLYDIAEALVTD*QVSFTNGDSNIPLH
Trigger: ATGCAAAGGAATATTAGAATCACCATTTGTGAAAGAAACTTGGCAGTCTGTTACAAGAGCCTCAGCTATGTCATACAGTTTCACCCAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS GCA 72 bp GCACCGGCTGTGCGTTTGGGTACAGCGACCCAGCAGTaGCGGCAGGCAGACAGGCAGAAAGCTGGCCCGAGG +
Preference number: 6 (lower is better)
Translates to: APAVRLGTATQQ*RQADRQKAGPR
Trigger: CCTCGGGCCAGCTTTCTGCCTGTCTGCCTGCCGGCACTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254853.10
ENST00000424747.1
ENST00000573674.1
ENST00000575919.1
CDS CAA 72 bp CTGGCAGGTAATAGGCACGGGGCACCGGCTGTGCGTTaGGGTACAGCGACCCAGCAGTGCCGGCAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: LAGNRHGAPAVR*GTATQQCRQAD
Trigger: GTCTGCCTGCCGGCACTGCTGGGTCGCTGTACCCAAACGCACAGCCGGTGCCCCGTGCCTATTACCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424747.1
ENST00000575919.1
CDS CCA 72 bp GATGAGCAGAGACTCAGGGCTGGCTGTTCTGGGACCTaGACCCCAACCTTAAGTTCCACCCACCAAGCCTGG +
Preference number: 6 (lower is better)
Translates to: DEQRLRAGCSGT*TPTLSSTHQAW
Trigger: CCAGGCTTGGTGGGTGGAACTTAAGGTTGGGGTCCAGGTCCCAGAACAGCCAGCCCTGAGTCTCTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575919.1
CDS TCA 72 bp GGAGAATTGCTTGAACCCGGGAGGCGGAGATTGTGGTaGGCCGAGATCATGTCATTGCATTCCAGACTGGAC +
Preference number: 6 (lower is better)
Translates to: GELLEPGRRRLW*AEIMSLHSRLD
Trigger: GTCCAGTCTGGAATGCAATGACATGATCTCGGCTCACCACAATCTCCGCCTCCCGGGTTCAAGCAATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS GCA 72 bp GGAGGCGGAGATTGTGGTGAGCCGAGATCATGTCATTaGATTCCAGACTGGACGACAAGAGGAAAACTCCGT +
Preference number: 6 (lower is better)
Translates to: GGGDCGEPRSCH*IPDWTTRGKLR
Trigger: ACGGAGTTTTCCTCTTGTCGTCCAGTCTGGAATGCAATGACATGATCTCGGCTCACCACAATCTCCGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS CAA 72 bp CAGGCAGGTCCTTCCCTAGGTAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAAGACCTTCTAGCACGG +
Preference number: 6 (lower is better)
Translates to: QAGPSLGRSKDA*VLLETEDLLAR
Trigger: CCGTGCTAGAAGGTCTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCTACCTAGGGAAGGACCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254853.10
ENST00000573674.1
CDS CAA 72 bp CAGGCAGGTCCTTCCCTAGGTAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAAGACCTTCTAGCTGGA +
Preference number: 6 (lower is better)
Translates to: QAGPSLGRSKDA*VLLETEDLLAG
Trigger: TCCAGCTAGAAGGTCTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCTACCTAGGGAAGGACCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424747.1
ENST00000575919.1
CDS CAA 72 bp CAGGCAGGTCCTTCCCTAGGTAGGTCCAAAGATGCTTaGGTTCTTCTGGAAACTGAAGACCTTCTAGCTGTC +
Preference number: 6 (lower is better)
Translates to: QAGPSLGRSKDA*VLLETEDLLAV
Trigger: GACAGCTAGAAGGTCTTCAGTTTCCAGAAGAACCAAAGCATCTTTGGACCTACCTAGGGAAGGACCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7
CDS GCA 72 bp AAACTGTATGACATAGCTGAGGCTCTTGTAACAGACTaGCAAGTTTCTTTCACAAATGGTGATTCTAATATT +
Preference number: 6 (lower is better)
Translates to: KLYDIAEALVTD*QVSFTNGDSNI
Trigger: AATATTAGAATCACCATTTGTGAAAGAAACTTGGCAGTCTGTTACAAGAGCCTCAGCTATGTCATACAGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512825.7