Pregenerated sensors for SLC51B (Homo sapiens)
Ensembl gene IDs: ENSG00000186198Ensembl transcript IDs: ENST00000334287.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCCCCCAGCAGCCCTCCTaGCCTCCTCGGTTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPPQQPS*PPRFWP Trigger: GGGCCAGAACCGAGGAGGCCAGGAGGGCTGCTGGGG...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGCCTCCTCGGTTCTaGCCCCTGGGCAGAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGWPPRF*PLGREA Trigger: GGCTTCTCTGCCCAGGGGCCAGAACCGAGGAGGCCA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTACCACAGTACCGGCTaGGTCTCCGGGAGCCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPYHSTG*VSGSPL Trigger: GAGGGGGCTCCCGGAGACCCAGCCGGTACTGTGGTA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGAAGTGCCTGGAGAGCCTaGGGCAGCTGGACCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGSAWRA*GSWTHL Trigger: CAGATGGGTCCAGCTGCCGCAGGCTCTCCAGGCACT...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTTAGGGGACAGTGCCTaGAGAGCCTGCGGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPLGDSA*RACGSW Trigger: CCAGCTGCCGCAGGCTCTCCAGGCACTGTCCCCTAA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATCACTTAGGGGACAGTaGCTGGAGAGCCTGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGSLRGQ*LESLRQ Trigger: CTGCCGCAGGCTCTCCAGGCACTGTCCCCTAAGTGA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGAGCTCCTGGTAGCGTGTaGAACGAGGTCCTTAGACCC | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGAPGSV*NEVLRP Trigger: GGGTCTAAGGACCTCGTTGCACACGCTACCAGGAGC...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATCTTCCAGCAGCTCCTaGGGTACCACAGTACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGSSSSS*GTTVPA Trigger: AGCCGGTACTGTGGTACCCCAGGAGCTGCTGGAAGA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCAGGATGGGGCTTCTCTaGACCCTCACTAGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPRMGLL*TLTSSQ Trigger: CTGAGAGCTAGTGAGGGTTCAGAGAAGCCCCATCCT...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGAGAGGTTTCAGGCCACTaGGCTGAGCCCACATCATGT | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGEVSGH*AEPTSC Trigger: ACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTC...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCACGACTGCCTTGATCTaGTGTTGGGAGCAGCACCGA | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPTTALI*CWEQHR Trigger: TCGGTGCTGCTCCCAACAGCAGATCAAGGCAGTCGT...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCCTGCCAGGGCAAGGATaGAATGATTCCAGGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPLPGQG*NDSREM Trigger: CATCTCCCTGGAATCATTCCATCCTTGCCCTGGCAG...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCGTGTCTGGCTTAGGATaGGGCTTCTCTGAACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPVSGLG*GFSEPS Trigger: TGAGGGTTCAGAGAAGCCCCATCCTAAGCCAGACAC...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCCCCACATCATGTGTCTaGCTTAGGATGGGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPPTSCV*LRMGLL Trigger: GAGAAGCCCCATCCTAAGCCAGACACATGATGTGGG...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCGATAGTCTTTGCACTTaGGCTCTCCCAGGCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPDSLCT*ALPGSN Trigger: GTTACTGCCTGGGAGAGCTCAAGTGCAAAGACTATC...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCAGGGCAAGGATGGAATaGTTCCAGGGAGATGCATCT | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPRARME*FQGDAS Trigger: AGATGCATCTCCCTGGAATCATTCCATCCTTGCCCT...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTCTTTTCTGCTTGCCTaGATGCTTCTTCCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPSFLLA*MLLPRR Trigger: CCTCCTGGGAAGAAGCATCCAGGCAAGCAGAAAAGA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCGGCTGTTGTGATCCTTaGCCTCATCCAAATGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPGCCDP*PHPNAG Trigger: TCCTGCATTTGGATGAGGCCAAGGATCACAACAGCC...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATTGTTTAGGCTGTTGTaGTCCTTGGCCTCATCCAAA | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGLFRLL*SLASSK Trigger: TTTGGATGAGGCCAAGGATCACAACAGCCTAAACAA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR TCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCATCCGGAAGGAAAACTaGCAGCACATCTCTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPIRKEN*QHISLF Trigger: AAAGAGAGAGATGTGCTGTCAGTTTTCCTTCCGGAT...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGACTTTTCTTTTCTGCTTaGCTGGATGCTTCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGLFFSA*LDASSQ Trigger: CTGGGAAGAAGCATCCAGGCAAGCAGAAAAGAAAAG...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATTGGCCTCATCCAAATaGAGGACTTCTGGAGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGLASSK*RTSGVS Trigger: AGAAACTCCAGAAGTCCTGCATTTGGATGAGGCCAA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGAAACTCAAGTTCCACCTaGGCCAAGTTTGGCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGNSSST*AKFGFS Trigger: AGAAAAGCCAAACTTGGCCCAGGTGGAACTTGAGTT...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGACTAGCTCTCAGTTTCTaGTACATCCGGAAGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGLALSF*YIRKEN Trigger: GTTTTCCTTCCGGATGTACCAGAAACTGAGAGCTAG...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGAGCATCTTTTCTTTTCTaGTTGCCTGGATGCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGASFLF*LPGCFF Trigger: GAAGAAGCATCCAGGCAAGCAGAAAAGAAAAGATGC...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGACAAATGCAGGACTTCTaGAGTTTCTTTTTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PERFQATELSPHHVSGLGQMQDF*SFFFWW Trigger: CCACCAGAAAAAGAAACTCCAGAAGTCCTGCATTTG...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CCA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTTTTCCTCCTCTTTATaGGAGAACAGGATAGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TELSPHHVSGLGWGFSEPFSSSL*ENRIVF Trigger: AAAGACTATCCTGTTCTCCCATAAAGAGGAGGAAAA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CAA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTTCCTGACGACTGCCTaGATCTGCTGTTGGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TELSPHHVSGLGWGFSEPFLTTA*ICCWEQ Trigger: CTGCTCCCAACAGCAGATCAAGGCAGTCGTCAGGAA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CAA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGCCTTGATCTGCTGTaGGGAGCAGCACCGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: PERFQATELSPHHVSGLGCLDLL*GAAPIS Trigger: AGAAATCGGTGCTGCTCCCAACAGCAGATCAAGGCA...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CAA 90 bp | CCTGAGAGGTTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGACCACCTGGGCCAAGTTaGGCTTTTCTGAGAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PERFQATELSPHHVSGLGPPGPS*AFLRAK Trigger: CTTTGCTCTCAGAAAAGCCAAACTTGGCCCAGGTGG...TCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAACCTCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS GCA 90 bp | GATGCTTCTTCCCAGGAGGACCATGCTTATAATGACCACCACAGCTaGCAGGGCAAGGATGGAATGATTCCAGGGAGATGCATCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: DASSQEDHAYNDHHS*QGKDGMIPGRCIFH Trigger: GTGGAAGATGCATCTCCCTGGAATCATTCCATCCTTGCCCTGGCAGCTGTGGTGGTCATTATAAGCATGGTCCTCCTGGGAAGAAGCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CCA 90 bp | TTTCAGGCCACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATaGGGCTTCTCTGAACCCTCACTAGCTCTCAGTTTCTGGTACATC | + |
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Preference number: 5 (lower is better) Translates to: FQATELSPHHVSGLG*GFSEPSLALSFWYI Trigger: GATGTACCAGAAACTGAGAGCTAGTGAGGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGTGGCCTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS-3UTR CAA 90 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATGGGGCTTCTCTGAACCCTCTTTTCTTTTCTGCTaGCCTGGATGCTTCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TELSPHHVSGLGWGFSEPSFLFC*PGCFFP Trigger: TGGGAAGAAGCATCCAGGCAAGCAGAAAAGAAAAGA...GGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS TCA 90 bp | TTCCTTTTCCTCCTCTTTATGGGAGAACAGGATAGTCTTTGCACTTaGGCTCTCCCAGGCAGTAACAGCTGTCACTTAGGGGACAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: FLFLLFMGEQDSLCT*ALPGSNSCHLGDSA Trigger: GGCACTGTCCCCTAAGTGACAGCTGTTACTGCCTGGGAGAGCTCAAGTGCAAAGACTATCCTGTTCTCCCATAAAGAGGAGGAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CCA 90 bp | CTGAGAGCAAAGTTTCTCTTAGGTTGTTTAGGCTGTTGTGATCCTTaGCCTCATCCAAATGCAGGACTTCTGGAGTTTCTTTTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LRAKFLLGCLGCCDP*PHPNAGLLEFLFLV Trigger: CACCAGAAAAAGAAACTCCAGAAGTCCTGCATTTGGATGAGGCCAAGGATCACAACAGCCTAAACAACCTAAGAGAAACTTTGCTCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS TCA 90 bp | GGCTTTTCTGAGAGCAAAGTTTCTCTTAGGTTGTTTAGGCTGTTGTaGTCCTTGGCCTCATCCAAATGCAGGACTTCTGGAGTTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: GFSESKVSLRLFRLL*SLASSKCRTSGVSF Trigger: AAAAGAAACTCCAGAAGTCCTGCATTTGGATGAGGCCAAGGATCACAACAGCCTAAACAACCTAAGAGAAACTTTGCTCTCAGAAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS GCA 72 bp | CCCCCGGATCCTGAGTTCCTGACGACTGCCTTGATCTaGTGTTGGGAGCAGCACCGATTTCTGTATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPDPEFLTTALI*CWEQHRFLYLP Trigger: AGGAAGATACAGAAATCGGTGCTGCTCCCAACAGCAGATCAAGGCAGTCGTCAGGAACTCAGGATCCGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS GCA 72 bp | TCCCAGGAGGACCATGCTTATAATGACCACCACAGCTaGCAGGGCAAGGATGGAATGATTCCAGGGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: SQEDHAYNDHHS*QGKDGMIPGRC Trigger: GCATCTCCCTGGAATCATTCCATCCTTGCCCTGGCAGCTGTGGTGGTCATTATAAGCATGGTCCTCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CCA 72 bp | ACTGAGCTGAGCCCACATCATGTGTCTGGCTTAGGATaGGGCTTCTCTGAACCCTCACTAGCTCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TELSPHHVSGLG*GFSEPSLALSF Trigger: GAAACTGAGAGCTAGTGAGGGTTCAGAGAAGCCCCATCCTAAGCCAGACACATGATGTGGGCTCAGCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CAA 90 bp | ACAGCACATCTCTCTCTTTTAACTCAAGTTCCACCTGGGCCAAGTTaGGCTTTTCTGAGAGCAAAGTTTCTCTTAGGTTGTTTAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TAHLSLLTQVPPGPS*AFLRAKFLLGCLGC Trigger: ACAGCCTAAACAACCTAAGAGAAACTTTGCTCTCAGAAAAGCCAAACTTGGCCCAGGTGGAACTTGAGTTAAAAGAGAGAGATGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CCA 72 bp | AAGTTTCTCTTAGGTTGTTTAGGCTGTTGTGATCCTTaGCCTCATCCAAATGCAGGACTTCTGGAGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KFLLGCLGCCDP*PHPNAGLLEFL Trigger: AAGAAACTCCAGAAGTCCTGCATTTGGATGAGGCCAAGGATCACAACAGCCTAAACAACCTAAGAGAAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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| CDS CAA 72 bp | CTCTCTCTTTTAACTCAAGTTCCACCTGGGCCAAGTTaGGCTTTTCTGAGAGCAAAGTTTCTCTTAGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LSLLTQVPPGPS*AFLRAKFLLGC Trigger: ACAACCTAAGAGAAACTTTGCTCTCAGAAAAGCCAAACTTGGCCCAGGTGGAACTTGAGTTAAAAGAGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334287.3 |
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