RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC4A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000188687

Ensembl transcript IDs: ENST00000346834.8, ENST00000358683.8, ENST00000377632.5, ENST00000377634.8, ENST00000394019.6, ENST00000423644.5, ENST00000425249.6, ENST00000432728.1, ENST00000436454.1, ENST00000444570.5, ENST00000479776.1, ENST00000480696.1, ENST00000483195.5, ENST00000637036.1

Found 729 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGACCCTCCCAGTGAAGACTAAGCCAGGCTCTCCATCTCCCATCTaGGAGAAGCTGCTTCATCCTAGAGGGTGGTCTCACTGTCAGTTT +
Preference number: 1 (lower is better)
Translates to: KTLPVKTKPGSPSPI*EKLLHPRGWSHCQF
Trigger: AAACTGACAGTGAGACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGGGAGATGGAGAGCCTGGCTTAGTCTTCACTGGGAGGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR TCA 90 bp GGGTGGTCTCACTGTCAGTTTCTCTTCGGTATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCATCTCTATCTTCACCTGTGGCACCA +
Preference number: 1 (lower is better)
Translates to: GWSHCQFLFGIYPCL*SHSLTPSLSSPVAP
Trigger: TGGTGCCACAGGTGAAGATAGAGATGGAGTCAGACTATGACTTCACAGACATGGATAAATACCGAAGAGAAACTGACAGTGAGACCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR TCA 90 bp GTCAGTTTCTCTTCGGTATTTATCCATGTCTGTGAAGTCATAGTCTaGCTCCATCTCTATCTTCACCTGTGGCACCATGAACACTGGGTT +
Preference number: 1 (lower is better)
Translates to: VSFSSVFIHVCEVIV*LHLYLHLWHHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAGATGGAGTCAGACTATGACTTCACAGACATGGATAAATACCGAAGAGAAACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR CCA 90 bp AGCTCTGAGATTAAATGTAATCAAACACTTATTGAGAGCTTTCTATaGACCAGGCACTACACTAGACGCTGGGAATTACAGAGGCAATTA +
Preference number: 1 (lower is better)
Translates to: SSEIKCNQTLIESFL*TRHYTRRWELQRQL
Trigger: TAATTGCCTCTGTAATTCCCAGCGTCTAGTGTAGTGCCTGGTCCATAGAAAGCTCTCAATAAGTGTTTGATTACATTTAATCTCAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGTTCCGTGAGTAGCTaGAAGCAGGTGAAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGSVSS*KQVKLD
Trigger: GTCCAGCTTCACCTGCTTTCAGCTACTCACGGAACC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTGCCTAGGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLPRLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCCTAGGCAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
3UTR-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGTTCCGTGAGTAGCTaGAAGCAGGTGAAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGSVSS*KQVKLD
Trigger: GTCCAGCTTCACCTGCTTTCAGCTACTCACGGAACC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCACCTGTGGCACCATaGACACTGGGTTCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSPVAP*TLGSVS
Trigger: ACTCACGGAACCCAGTGTTCATGGTGCCACAGGTGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTAAGACCCTCCCAGTaGAGACTAAGCCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLRPSQ*RLSQAL
Trigger: GAGAGCCTGGCTTAGTCTTCACTGGGAGGGTCTTAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACCATCTGGGAGAAGCTaGTTCATCCTAGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSPSGRS*FILEGG
Trigger: ACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTTAAGACCCTCCCAGTaGAGACTAAGCCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLRPSQ*RLSQAL
Trigger: GAGAGCCTGGCTTAGTCTTCACTGGGAGGGTCTTAA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCACCTGTGGCACCATaGACACTGGGTTCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSPVAP*TLGSVS
Trigger: ACTCACGGAACCCAGTGTTCATGGTGCCACAGGTGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACCATCTGGGAGAAGCTaGTTCATCCTAGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAPSGRS*FILEGG
Trigger: ACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCTCTATCTTCACCTGTaGCACCATGAACACTGGGTT +
Preference number: 2 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALYLHL*HHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCTTCATCCTAGAGGGTaGTCTCACTGTCAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALHPRG*SHCQFL
Trigger: GAGAAACTGACAGTGAGACCACCCTCTAGGATGAAG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTTAAGACCCTCCCAGTaGAGACTAAGCCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFLRPSQ*RLSQAL
Trigger: GAGAGCCTGGCTTAGTCTTCACTGGGAGGGTCTTAA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCCATCTGGGAGAAGCTaGTTCATCCTAGAGGGTGGT +
Preference number: 2 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFPSGRS*FILEGG
Trigger: ACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTCTATCTTCACCTGTaGCACCATGAACACTGGGTT +
Preference number: 2 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLYLHL*HHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTCTATCTTCACCTGTaGCACCATGAACACTGGGTT +
Preference number: 2 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLYLHL*HHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGTAGCTGAAAGCAGGTaGAGCTGGACAGGATATTTT +
Preference number: 2 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNVAESR*SWTGYF
Trigger: AAAATATCCTGTCCAGCTTCACCTGCTTTCAGCTAC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAIYPCL*SHSLTP
Trigger: TGGAGTCAGACTATGACTTCACAGACATGGATAAAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGTAGCTGAAAGCAGGTaGAGCTGGACAGGATATTTT +
Preference number: 2 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFVAESR*SWTGYF
Trigger: AAAATATCCTGTCCAGCTTCACCTGCTTTCAGCTAC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGTTCCGTGAGTAGCTaGAAGCAGGTGAAGCTGGAC +
Preference number: 2 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGSVSS*KQVKLD
Trigger: GTCCAGCTTCACCTGCTTTCAGCTACTCACGGAACC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: SIWESPSHTSGARPIMQMIYPCL*SHSLTP
Trigger: TGGAGTCAGACTATGACTTCACAGACATGGATAAAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGCCATCTCAGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATGGC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR CAA 90 bp ATCAATAGATCTCCAGTTTTCTATAGGCAGACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGCACAGAGAAGTTAAGACCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: INRSPVFYRQTDSLC*IKKETGTEKLRPSQ
Trigger: CTGGGAGGGTCTTAACTTCTCTGTGCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGTCTGCCTATAGAAAACTGGAGATCTATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCA +
Preference number: 2 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKIYPCL*SHSLTP
Trigger: TGGAGTCAGACTATGACTTCACAGACATGGATAAAT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATCATTAACAGAGTTTTaGAACTGGCTTTTCAATCTG +
Preference number: 2 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSLTEF*NWLFNL
Trigger: CAGATTGAAAAGCCAGTTCCAAAACTCTGTTAATGA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR GCA 72 bp CTAAGCCAGGCTCTCCATCTCCCATCTGGGAGAAGCTaGTTCATCCTAGAGGGTGGTCTCACTGTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: LSQALHLPSGRS*FILEGGLTVSF
Trigger: GAAACTGACAGTGAGACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGGGAGATGGAGAGCCTGGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKATDSLC*IKKETG
Trigger: GCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSTDSLC*IKKETG
Trigger: GCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR GCA 72 bp ATAAGACATGGATTCCAGCTGTCTCCCTGGCTGGAGTaGAGTGGCATGATTATAGCTCACTGCAGCCTTGAA +
Preference number: 3 (lower is better)
Translates to: IRHGFQLSPWLE*SGMIIAHCSLE
Trigger: TTCAAGGCTGCAGTGAGCTATAATCATGCCACTGCACTCCAGCCAGGGAGACAGCTGGAATCCATGTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFTDSLC*IKKETG
Trigger: GCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGCTGGACAGGATATTTaGAAGTGCAAGGTGATGCTT +
Preference number: 3 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFAGQDI*KCKVML
Trigger: AAGCATCACCTTGCACTTCAAAATATCCTGTCCAGC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR CCA 72 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTaGAGCAAGGCCCATAATGCAGATGGTTCAAACTTT +
Preference number: 3 (lower is better)
Translates to: WLFNLGKPQSHF*SKAHNADGSNF
Trigger: AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
3UTR CCA 72 bp GAGAGCTTTCTATGGACCAGGCACTACACTAGACGCTaGGAATTACAGAGGCAATTACCTGTCCTATACTCA +
Preference number: 3 (lower is better)
Translates to: ESFLWTRHYTRR*ELQRQLPVLYS
Trigger: TGAGTATAGGACAGGTAATTGCCTCTGTAATTCCCAGCGTCTAGTGTAGTGCCTGGTCCATAGAAAGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR CCA 72 bp GTCACTGAAGGAAGAATCAGAGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAATGCAGTGGATACCGT +
Preference number: 3 (lower is better)
Translates to: VTEGRIRVSNSN*KIFFWQCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCACTCTGATTCTTCCTTCAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425249.6
3UTR TCA 72 bp CACTGTCAGTTTCTCTTCGGTATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCATCTCTATCTTCACCT +
Preference number: 3 (lower is better)
Translates to: HCQFLFGIYPCL*SHSLTPSLSSP
Trigger: AGGTGAAGATAGAGATGGAGTCAGACTATGACTTCACAGACATGGATAAATACCGAAGAGAAACTGACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAACAAAGGGGAGAGCTTaGCATCTAAGCAATACTTTT +
Preference number: 3 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKTKGRA*HLSNTF
Trigger: AAAAGTATTGCTTAGATGCAAAGCTCTCCCCTTTGT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
3UTR-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAATAACCCTTAGGAAATaGGATGTGACAGGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKITLRK*DVTGRK
Trigger: TTTTCTCCCTGTCACATCCAATTTCCTAAGGGTTAT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACGGCGCAGCGGCACGTaGCGCAGGAAGGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSRRSGT*RRKAWS
Trigger: GGACCATGCCTTCCTGCGGCACGTGCCGCTGCGCCG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCGGCGCAGCGGCACGTaGCGCAGGAAGGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMRRSGT*RRKAWS
Trigger: GGACCATGCCTTCCTGCGGCACGTGCCGCTGCGCCG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGGCCAGTCAGTTCCTaGTGTGGCTGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGPVSS*CGWSGR
Trigger: GCGGCCAGACCAGCCACAGCAGGAACTGACTGGCCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGCTGCTGTCCTGGCTaGTTGCCCCACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKACCCPG*LPHSLG
Trigger: GCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAPLPEL*PQETIL
Trigger: GAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACCCAGCATGGCCGACTaGATGAGGCGCACGAACGCG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSPSMAD*MRRTNA
Trigger: CGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAACCAGGGTGAAGAGGTaGATCCGGCGCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSTRVKR*IRRSGT
Trigger: CGTGCCGCTGCGCCGGATCCACCTCTTCACCCTGGT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCACCAGGGTGAAGAGGTaGATCCGGCGCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKATRVKR*IRRSGT
Trigger: CGTGCCGCTGCGCCGGATCCACCTCTTCACCCTGGT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAGTTCCTGCTGTGGCTaGTCTGGCCGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSSCCG*SGRRPQ
Trigger: CTGGGGCCTGCGGCCAGACCAGCCACAGCAGGAACT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGGACACGTGGGGCTTaGTCCAGCGTTCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSWTRGA*SSVRRL
Trigger: AAGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCACCACCACCTCCATTaGCTCCTCCAGGAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAHHHLH*LLQELR
Trigger: GCGGAGCTCCTGGAGGAGGCAATGGAGGTGGTGGTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCGGCGCAGCGGCACGTaGCGCAGGAAGGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSRRSGT*RRKAWS
Trigger: GGACCATGCCTTCCTGCGGCACGTGCCGCTGCGCCG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACGGCGCAGCGGCACGTaGCGCAGGAAGGCATGGTCC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWERRSGT*RRKAWS
Trigger: GGACCATGCCTTCCTGCGGCACGTGCCGCTGCGCCG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTGCTGCTGTCCTGGCTaGTTGCCCCACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMCCCPG*LPHSLG
Trigger: GCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGCCGCAGGAAGGCATaGTCCGGCTGGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSCRRKA*SGWCLA
Trigger: AGCCAAGCACCAGCCGGACCATGCCTTCCTGCGGCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACAGCCACCGTGGATTTaGGGATCCAGAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSQPPWI*GSRAPP
Trigger: TGGCGGTGCTCTGGATCCTCAAATCCACGGTGGCTG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTGGACACGTGGGGCTTaGTCCAGCGTTCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMWTRGA*SSVRRL
Trigger: AAGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSTVPV*RQVRSS
Trigger: CGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGCTCCGGGCAGGACTaGGATTTGTGGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGSGQD*DLWWRL
Trigger: CAGTCTCCACCACAAATCGCAGTCCTGCCCGGAGCC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGCGGGCAGGATGCTTaGTGGGTATACCCACCACGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGGQDA*WVYPPR
Trigger: CCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGCATGGTCCGGCTGGTaGTTGGCTGGCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSAWSGW*LAGIRK
Trigger: CTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGGCCAGTCAGTTCCTaGTGTGGCTGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGPVSS*CGWSGR
Trigger: GCGGCCAGACCAGCCACAGCAGGAACTGACTGGCCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCGGTCCCCATCTGGATaGCATTCAGGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMRSPSG*HSGRPR
Trigger: GCGTGGCCTCCCTGAATGGCATCCAGATGGGGACCG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCCCCCAGGATGTCCTaGAGCTGCTCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSPRMS*SCSAAG
Trigger: CCCAGCTGCTGAGCAGCTCCAGGACATCCTGGGGGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGCTTCTTGGTTTGGTaGCGGTGCCTCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGFLVW*RCLLRR
Trigger: CCTCCTGAGGAGGCACCGCCACCAAACCAAGAAGCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACGCCCACGAGCACGTTaGACGCTTCTGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSRPRAR*TLLSPW
Trigger: CCAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACCCAGCATGGCCGACTaGATGAGGCGCACGAACGCG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAPSMAD*MRRTNA
Trigger: CGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGCCGCAGGCCCCAGTaGACTTTTTGCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGRRPQ*TFCRPE
Trigger: TTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATCCATGCTGCTGTCCTaGCTGCTTGCCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSMLLS*LLAPLP
Trigger: AGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGAGCTGCTCAGCAGCTaGGGACCGAGTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAELLSS*GPSPAD
Trigger: ATCAGCAGGACTCGGTCCCCAGCTGCTGAGCAGCTC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCCTCCGGTCCCCATCTaGATGCCATTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMPPVPI*MPFREA
Trigger: GGCCTCCCTGAATGGCATCCAGATGGGGACCGGAGG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGAGGGAGGAGGGAACTaGGGCATGACCGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAEGGGN*GMTGKM
Trigger: CATCTTCCCGGTCATGCCCCAGTTCCCTCCTCCCTC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480696.1
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCAGCCACCGTGGATTTaGGGATCCAGAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMQPPWI*GSRAPP
Trigger: TGGCGGTGCTCTGGATCCTCAAATCCACGGTGGCTG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSTVPV*RQVRSS
Trigger: CGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSTVPV*RQVRSS
Trigger: CGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSTVPV*RQVRSS
Trigger: CGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAGCCAGCCATGGCAGTaGCCAGGAAGCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSQPWQ*PGSSPS
Trigger: TGATGGAGAGCTTCCTGGGCACTGCCATGGCTGGCT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGGCGGGCAGGATGCTTaGTGGGTATACCCACCACGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAGGQDA*WVYPPR
Trigger: CCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCAGGGCGGGCAGGATaGTTGCTGGGTATACCCACC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAAGRAG*LLGIPT
Trigger: GGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGTTCCCAGAACTGGATaGCATTCAGGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAVPRTG*HSGRPR
Trigger: GCGTGGCCTCCCTGAATGGCATCCAGTTCTGGGAAC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGCATGGTCCGGCTGGTaGTTGGCTGGCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMAWSGW*LAGIRK
Trigger: CTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGGGCCAGTCAGTTCCTaGTGTGGCTGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIGPVSS*CGWSGR
Trigger: GCGGCCAGACCAGCCACAGCAGGAACTGACTGGCCC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTGCTGCTGTCCTGGCTaGTTGCCCCACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSCCCPG*LPHSLG
Trigger: GCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTGCTGCTGTCCTGGCTaGTTGCCCCACTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWCCCPG*LPHSLG
Trigger: GCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGAGGATGTCCTGGAGCTaGTCAGCAGCTGGGGACCGA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMRMSWS*SAAGDR
Trigger: TCGGTCCCCAGCTGCTGAGCAGCTCCAGGACATCCT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTCCCCCAGGATGTCCTaGAGCTGCTCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSPRMS*SCSAAG
Trigger: CCCAGCTGCTGAGCAGCTCCAGGACATCCTGGGGGA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFPLPEL*PQETIL
Trigger: GAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIPLPEL*PQETIL
Trigger: GAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATGGGCTTCTTGGTTTaGTGGCGGTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAMGFLV*WRCLLR
Trigger: CCTGAGGAGGCACCGCCACCAAACCAAGAAGCCCAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAATGGGCTTCTTGGTTTaGTGGCGGTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSMGFLV*WRCLLR
Trigger: CCTGAGGAGGCACCGCCACCAAACCAAGAAGCCCAT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCCCAGCATGGCCGACTaGATGAGGCGCACGAACGCG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFPSMAD*MRRTNA
Trigger: CGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACCCAGCATGGCCGACTaGATGAGGCGCACGAACGCG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEPSMAD*MRRTNA
Trigger: CGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGQDAC*VYPPRV
Trigger: AACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGQDAC*VYPPRV
Trigger: AACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGACTCCCAGAAACTaGGGCTGCTCCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLTPRN*GCSPGA
Trigger: TGCCCCTGGGGAGCAGCCCCAGTTTCTGGGAGTCAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACTGACTCCCAGAAACTaGGGCTGCTCCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALTPRN*GCSPGA
Trigger: TGCCCCTGGGGAGCAGCCCCAGTTTCTGGGAGTCAG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTACCAGGGTGAAGAGGTaGATCCGGCGCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSTRVKR*IRRSGT
Trigger: CGTGCCGCTGCGCCGGATCCACCTCTTCACCCTGGT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGCCGCAGGCCCCAGTaGACTTTTTGCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGRRPQ*TFCRPE
Trigger: TTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAGTTCCTGCTGTGGCTaGTCTGGCCGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSSCCG*SGRRPQ
Trigger: CTGGGGCCTGCGGCCAGACCAGCCACAGCAGGAACT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAGTTCCTGCTGTGGCTaGTCTGGCCGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSSCCG*SGRRPQ
Trigger: CTGGGGCCTGCGGCCAGACCAGCCACAGCAGGAACT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGTTCCTGCTGTGGCTaGTCTGGCCGCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSSCCG*SGRRPQ
Trigger: CTGGGGCCTGCGGCCAGACCAGCCACAGCAGGAACT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCGGTCAGGCCGCGTTaGCTTGATGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSVRPR*LDDTGH
Trigger: GTGCCCAGTGTCATCAAGCCAACGCGGCCTGACCGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGTGCAGTGGCCTGTaGCTCCTGGGCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQCSGL*LLGPDS
Trigger: GGAGTCAGGGCCCAGGAGCCACAGGCCACTGCACTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCAGGAGGACGTAACTaGCCCTCTCCCGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASGGRN*PSPGAL
Trigger: CAGAGCTCCGGGAGAGGGTCAGTTACGTCCTCCTGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGGAGCTTCTCAAAGATaGGGATGGGCCCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAGASQR*GWAPCC
Trigger: GCAGCACGGGGCCCATCCTCATCTTTGAGAAGCTCC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGAGCTTCTCAAAGATaGGGATGGGCCCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGASQR*GWAPCC
Trigger: GCAGCACGGGGCCCATCCTCATCTTTGAGAAGCTCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAGGAGCACAAAGCCATaGGGATGCCCACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSRSTKP*GCPPRT
Trigger: TGTTCTGGGTGGGCATCCTCATGGCTTTGTGCTCCT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTGTGGGCGATGGAGATaGCCGTGGCAGCCACGTACC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSCGRWR*PWQPRT
Trigger: GGTACGTGGCTGCCACGGTCATCTCCATCGCCCACA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGTTCCGTGAGTAGCTaGAAGCAGGTGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGSVSS*KQVKLD
Trigger: GTCCAGCTTCACCTGCTTTCAGCTACTCACGGAACC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTCACCTGTGGCACCATaGACACTGGGTTCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKASPVAP*TLGSVS
Trigger: ACTCACGGAACCCAGTGTTCATGGTGCCACAGGTGA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCTGGTCTCGAACTCCTaGGCTCAGGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALVSNS*AQAIHL
Trigger: CAGGTGAATTGCCTGAGCTCAGGAGTTCGAGACCAG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTCCTGCATCAGCCTCTaGAATGGCTGGGACTACAGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKASCISL*NGWDYR
Trigger: CCTGTAGTCCCAGCCATTTCAGAGGCTGATGCAGGA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGGACACGTGGGGCTTaGTCCAGCGTTCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEWTRGA*SSVRRL
Trigger: AAGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGCTCGAAGAGGCTGTaGAGGGATAGTGTGGACACG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKASSKRL*RDSVDT
Trigger: CGTGTCCACACTATCCCTGCACAGCCTCTTCGAGCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCAGACGTCCGTAATTTaGACTCTGCCGCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAQTSVI*TLPHPQ
Trigger: CTGCGGATGCGGCAGAGTGCAAATTACGGACGTCTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCACCACCACCTCCATTaGCTCCTCCAGGAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSHHHLH*LLQELR
Trigger: GCGGAGCTCCTGGAGGAGGCAATGGAGGTGGTGGTG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACACCACCACCTCCATTaGCTCCTCCAGGAGCTCCGC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEHHHLH*LLQELR
Trigger: GCGGAGCTCCTGGAGGAGGCAATGGAGGTGGTGGTG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGAGCCAGCCATGGCAGTaGCCAGGAAGCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSQPWQ*PGSSPS
Trigger: TGATGGAGAGCTTCCTGGGCACTGCCATGGCTGGCT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCGGGCAGGATGCTTaGTGGGTATACCCACCACGG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGGQDA*WVYPPR
Trigger: CCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGCAGGGCGGGCAGGATaGTTGCTGGGTATACCCACC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSAGRAG*LLGIPT
Trigger: GGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGCAGGGCGGGCAGGATaGTTGCTGGGTATACCCACC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIAGRAG*LLGIPT
Trigger: GGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCATGGTCCGGCTGGTaGTTGGCTGGCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAAWSGW*LAGIRK
Trigger: CTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGCCATCTCAGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATGGC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTTGCCTAGGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALPRLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCCTAGGCAA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTCCAAATCCTGGGATaGCCCAGTGCAGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSFQILG*PSAVAC
Trigger: ACAGGCCACTGCACTGGGGCATCCCAGGATTTGGAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTCCCCCAGGATGTCCTaGAGCTGCTCAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSPRMS*SCSAAG
Trigger: CCCAGCTGCTGAGCAGCTCCAGGACATCCTGGGGGA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCCGCAGGTCTTCCGTaGAGTGGTGTAGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASAGLP*SGVDSG
Trigger: GCCCGAGTCTACACCACTCCACGGAAGACCTGCGGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACGCCCACGAGCACGTTaGACGCTTCTGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNARPRAR*TLLSPW
Trigger: CCAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAACAGAGCCATTCATCTaGCCCAGCTCTGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSTEPFI*PSSARE
Trigger: CTCCCTAGCAGAGCTGGGCCAGATGAATGGCTCTGT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAAAGGCATGGTCCGGCTaGTGCTTGGCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAKAWSG*CLAGIR
Trigger: CCTGATGCCAGCCAAGCACCAGCCGGACCATGCCTT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTGCCGCAGGAAGGCATaGTCCGGCTGGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSCRRKA*SGWCLA
Trigger: AGCCAAGCACCAGCCGGACCATGCCTTCCTGCGGCA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTGCCGCAGGAAGGCATaGTCCGGCTGGTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWCRRKA*SGWCLA
Trigger: AGCCAAGCACCAGCCGGACCATGCCTTCCTGCGGCA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGACCAGGGTGAAGAGGTaGATCCGGCGCAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMTRVKR*IRRSGT
Trigger: CGTGCCGCTGCGCCGGATCCACCTCTTCACCCTGGT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGAGGGAGGAGGGAACTaGGGCTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNEGGGN*GSSSQS
Trigger: GGACTGTGATGAGGAGCCCCAGTTCCCTCCTCCCTC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGCCGCAGGCCCCAGTaGACTTTTTGCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGRRPQ*TFCRPE
Trigger: TTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTCCATGCTGCTGTCCTaGCTGCTTGCCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSMLLS*LLAPLP
Trigger: AGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCGGTCAGGCCGCGTTaGCTTGATGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASVRPR*LDDTGH
Trigger: GTGCCCAGTGTCATCAAGCCAACGCGGCCTGACCGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCACGTTGGACGCTTCTaGGTCCTTGGGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAHVGRF*VLGDLL
Trigger: AAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGAGATCATCTACCATaGGGGTTGCAATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKARDHLP*GLQWHG
Trigger: GCCGTGCCATTGCAACCCTCATGGTAGATGATCTCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGGGCAACTTCCTCTTaGTATCCAGACACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKARATSS*YPDTGH
Trigger: GTGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSWCQWG*SIEHGC
Trigger: ACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTACTCTCTGTTCCCTaGCTCCCAGAAACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLLSVP*LPETGA
Trigger: AGCCCCAGTTTCTGGGAGTCAGGGAACAGAGAGTAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGCAGCCACCGTGGATTTaGGGATCCAGAGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWQPPWI*GSRAPP
Trigger: TGGCGGTGCTCTGGATCCTCAAATCCACGGTGGCTG...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGAGGGCATTCTTTCTaGTCCGGAAATCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGGHSF*SGNLLL
Trigger: CAGGAGGAGATTTCCGGATCAGAAAGAATGCCCTCC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCTCCGGGCAGGACTaGGATTTGTGGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGSGQD*DLWWRL
Trigger: CAGTCTCCACCACAAATCGCAGTCCTGCCCGGAGCC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSSPIS*MAGISP
Trigger: TGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTCAGACACTCCTTCTTaGTCAGCAGGGACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKASDTPS*SAGTSP
Trigger: TGGACTGGTCCCTGCTGAGCAAGAAGGAGTGTCTGA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGTTCCCAGAACTGGATaGCATTCAGGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNVPRTG*HSGRPR
Trigger: GCGTGGCCTCCCTGAATGGCATCCAGTTCTGGGAAC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCCCCAGTGGACTTTTTaGAGGCCTGAAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAPQWTF*RPERCP
Trigger: GGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAGGATGTCCTGGAGCTaGTCAGCAGCTGGGGACCGA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFRMSWS*SAAGDR
Trigger: TCGGTCCCCAGCTGCTGAGCAGCTCCAGGACATCCT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGCTTCTTGGTTTGGTaGCGGTGCCTCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGFLVW*RCLLRR
Trigger: CCTCCTGAGGAGGCACCGCCACCAAACCAAGAAGCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCTTCTTGGTTTGGTaGCGGTGCCTCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGFLVW*RCLLRR
Trigger: CCTCCTGAGGAGGCACCGCCACCAAACCAAGAAGCC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATATGGGCTTCTTGGTTTaGTGGCGGTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNMGFLV*WRCLLR
Trigger: CCTGAGGAGGCACCGCCACCAAACCAAGAAGCCCAT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGTGGATGGGCTTCTTaGTTTGGTGGCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGGWAS*FGGGAS
Trigger: GGAGGCACCGCCACCAAACCAAGAAGCCCATCCACC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGGTGGATGGGCTTCTTaGTTTGGTGGCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFGGWAS*FGGGAS
Trigger: GGAGGCACCGCCACCAAACCAAGAAGCCCATCCACC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGTGGATGGGCTTCTTaGTTTGGTGGCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGGWAS*FGGGAS
Trigger: GGAGGCACCGCCACCAAACCAAGAAGCCCATCCACC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTAAGGAGCGGTGGATaGGCTTCTTGGTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLRSGG*ASWFGG
Trigger: GCCACCAAACCAAGAAGCCCATCCACCGCTCCTTAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCCGCAGGTCTTCCGTaGAGTGGTGTAGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSAGLP*SGVDSG
Trigger: GCCCGAGTCTACACCACTCCACGGAAGACCTGCGGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTCCGCAGGTCTTCCGTaGAGTGGTGTAGACTCGGGC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSAGLP*SGVDSG
Trigger: GCCCGAGTCTACACCACTCCACGGAAGACCTGCGGA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCGCCCACGAGCACGTTaGACGCTTCTGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIRPRAR*TLLSPW
Trigger: CCAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAACGCGATGAATGGCTaGTCTAGGAAGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKANAMNG*SRKSTS
Trigger: CGAGGTGGACTTCCTAGACCAGCCATTCATCGCGTT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCCTGATAATTGTCGGTaGCATCCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMPDNCR*HPPEAH
Trigger: GTGGGCTTCTGGGGGATGCCACCGACAATTATCAGG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCAGCGTTCCCAGAACTaGATGCCATTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNQRSQN*MPFREA
Trigger: GGCCTCCCTGAATGGCATCCAGTTCTGGGAACGCTG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAAGGCATGGTCCGGCTaGTGCTTGGCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFKAWSG*CLAGIR
Trigger: CCTGATGCCAGCCAAGCACCAGCCGGACCATGCCTT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAAGGCATGGTCCGGCTaGTGCTTGGCTGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWKAWSG*CLAGIR
Trigger: CCTGATGCCAGCCAAGCACCAGCCGGACCATGCCTT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGAGGGAGGAGGGAACTaGGGCTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFEGGGN*GSSSQS
Trigger: GGACTGTGATGAGGAGCCCCAGTTCCCTCCTCCCTC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGAGGGAGGAGGGAACTaGGGCTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSEGGGN*GSSSQS
Trigger: GGACTGTGATGAGGAGCCCCAGTTCCCTCCTCCCTC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAGGGAGGAGGGAACTaGGGCTCCTCATCACAGTCC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWEGGGN*GSSSQS
Trigger: GGACTGTGATGAGGAGCCCCAGTTCCCTCCTCCCTC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCCGCAGGCCCCAGTaGACTTTTTGCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGRRPQ*TFCRPE
Trigger: TTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCCATGCTGCTGTCCTaGCTGCTTGCCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSMLLS*LLAPLP
Trigger: AGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGAGCTGCTCAGCAGCTaGGGACCGAGTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFELLSS*GPSPAD
Trigger: ATCAGCAGGACTCGGTCCCCAGCTGCTGAGCAGCTC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCGGTCAGGCCGCGTTaGCTTGATGACACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSVRPR*LDDTGH
Trigger: GTGCCCAGTGTCATCAAGCCAACGCGGCCTGACCGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCCCCAGTCACACTTCTaGAGCAAGGCCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAPQSHF*SKAHNA
Trigger: TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGCGCACGAACGCGATaGATGGCTGGTCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGARTR*MAGLGS
Trigger: ACTTCCTAGACCAGCCATTCATCGCGTTCGTGCGCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGGCGCACGAACGCGATaGATGGCTGGTCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIGARTR*MAGLGS
Trigger: ACTTCCTAGACCAGCCATTCATCGCGTTCGTGCGCC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGAGAGATCATCTACCATaGGGGTTGCAATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMRDHLP*GLQWHG
Trigger: GCCGTGCCATTGCAACCCTCATGGTAGATGATCTCT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGAGGGCAACTTCCTCTTaGTATCCAGACACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMRATSS*YPDTGH
Trigger: GTGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAGCTTCTCAAAGATaGGGATGGGCCCCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMGASQR*GWAPCC
Trigger: GCAGCACGGGGCCCATCCTCATCTTTGAGAAGCTCC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGCCATTGCCTTTGCTaGAGTCGAAGAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGHCLC*SRRGAS
Trigger: AGAAGCTCCTCTTCGACTTCAGCAAAGGCAATGGCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAGGAGCACAAAGCCATaGGGATGCCCACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNRSTKP*GCPPRT
Trigger: TGTTCTGGGTGGGCATCCTCATGGCTTTGTGCTCCT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCACCGTTTTGGGGATCTaGTTGGACACTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKATVLGI*LDTFHG
Trigger: CCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGAAGGGAACATACTGTaGTGGTGTCAGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSEGNIL*WCQHSA
Trigger: TGCAGAGTGCTGACACCATCACAGTATGTTCCCTTC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGACTTTTTGCAGGCCTaGAAGATGTCCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKADFLQA*KMSLLV
Trigger: GACCAGAAGGGACATCTTTCAGGCCTGCAAAAAGTC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGACTTTTTGCAGGCCTaGAAGATGTCCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSDFLQA*KMSLLV
Trigger: GACCAGAAGGGACATCTTTCAGGCCTGCAAAAAGTC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGCTTCTTCTGGATTTTaGATTCTGACCCTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSASSGF*ILTLRS
Trigger: GGACCGGAGGGTCAGAATTCAAAATCCAGAAGAAGC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGGTCTCGAACTCCTaGGCTCAGGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLVSNS*AQAIHL
Trigger: CAGGTGAATTGCCTGAGCTCAGGAGTTCGAGACCAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTCCTGCATCAGCCTCTaGAATGGCTGGGACTACAGG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSCISL*NGWDYR
Trigger: CCTGTAGTCCCAGCCATTTCAGAGGCTGATGCAGGA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAAGCTCGAAGAGGCTGTaGAGGGATAGTGTGGACACG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASSKRL*RDSVDT
Trigger: CGTGTCCACACTATCCCTGCACAGCCTCTTCGAGCT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCAGACACTCCTTCTTaGTCAGCAGGGACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSDTPS*SAGTSP
Trigger: TGGACTGGTCCCTGCTGAGCAAGAAGGAGTGTCTGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGTTCCCAGAACTGGATaGCATTCAGGGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEVPRTG*HSGRPR
Trigger: GCGTGGCCTCCCTGAATGGCATCCAGTTCTGGGAAC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGCATGGTCCGGCTGGTaGTTGGCTGGCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMAWSGW*LAGIRK
Trigger: CTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATCCAGGCCAGGTCGTaGTGGGAAAAGATGAAATCC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAIQARS*WEKMKS
Trigger: GGATTTCATCTTTTCCCAGCACGACCTGGCCTGGAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGAGGATGTCCTGGAGCTaGTCAGCAGCTGGGGACCGA +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMRMSWS*SAAGDR
Trigger: TCGGTCCCCAGCTGCTGAGCAGCTCCAGGACATCCT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATGACACTGGGCACATaGAGCTTGGGAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAMTLGT*SLGVSR
Trigger: CCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCCATCTGGGAGAAGCTaGTTCATCCTAGAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMPSGRS*FILEGG
Trigger: ACCACCCTCTAGGATGAAGCAGCTTCTCCCAGATGG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCCATCTCAGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATGGC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCCATCTCAGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATGGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATTGCCTAGGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALPRLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCCTAGGCAA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTCCTGTGGTTAGTGTaGTCCAGCTTTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLLWLV*SSFPTP
Trigger: TGGGGTAGGAAAGCTGGACCACACTAACCACAGGAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATGGGCTTCTTGGTTTaGTGGCGGTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEMGFLV*WRCLLR
Trigger: CCTGAGGAGGCACCGCCACCAAACCAAGAAGCCCAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTAAGGAGCGGTGGATaGGCTTCTTGGTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLRSGG*ASWFGG
Trigger: GCCACCAAACCAAGAAGCCCATCCACCGCTCCTTAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAGGTCTTCCGTGGAGTaGTGTAGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFRSSVE*CRLGPA
Trigger: TGCTGGCCCGAGTCTACACCACTCCACGGAAGACCT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACTCAATCCGGATATTTaGGTCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLNPDI*VPFSRR
Trigger: CCTCCTGGAGAATGGGACCCAAATATCCGGATTGAG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCAGAGGGCACCTTCTTaGGGGGCTCAATCCGGATAT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNQRAPS*GAQSGY
Trigger: ATATCCGGATTGAGCCCCCCAAGAAGGTGCCCTCTG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAACAGAGCCATTCATCTaGCCCAGCTCTGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNATEPFI*PSSARE
Trigger: CTCCCTAGCAGAGCTGGGCCAGATGAATGGCTCTGT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCCTGATAATTGTCGGTaGCATCCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNPDNCR*HPPEAH
Trigger: GTGGGCTTCTGGGGGATGCCACCGACAATTATCAGG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGQDAC*VYPPRV
Trigger: AACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEGQDAC*VYPPRV
Trigger: AACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGCGTTCCCAGAACTaGATGCCATTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQRSQN*MPFREA
Trigger: GGCCTCCCTGAATGGCATCCAGTTCTGGGAACGCTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACAGCGTTCCCAGAACTaGATGCCATTCAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEQRSQN*MPFREA
Trigger: GGCCTCCCTGAATGGCATCCAGTTCTGGGAACGCTG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCAGGCCAGGTCGTGCTaGGAAAAGATGAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAQARSC*EKMKSR
Trigger: TCTGGATTTCATCTTTTCCCAGCACGACCTGGCCTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTCCATGCTGCTGTCCTaGCTGCTTGCCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMSMLLS*LLAPLP
Trigger: AGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGCTGCTCAGCAGCTaGGGACCGAGTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMELLSS*GPSPAD
Trigger: ATCAGCAGGACTCGGTCCCCAGCTGCTGAGCAGCTC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGGGCACATGCAGCTTaGGAGTTTCTAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAWAHAA*EFLGQN
Trigger: GTTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATCAGCCTCTGAAATaGCTGGGACTACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAHQPLK*LGLQVC
Trigger: ACACACCTGTAGTCCCAGCCATTTCAGAGGCTGATG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACATCAGCCTCTGAAATaGCTGGGACTACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSHQPLK*LGLQVC
Trigger: ACACACCTGTAGTCCCAGCCATTTCAGAGGCTGATG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTGAATTCCAAATCCTaGGATGCCCCAGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLNSKS*DAPVQW
Trigger: CCACTGCACTGGGGCATCCCAGGATTTGGAATTCAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACACGTTGGACGCTTCTaGGTCCTTGGGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAHVGRF*VLGDLL
Trigger: AAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAGGGCAACTTCCTCTTaGTATCCAGACACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNRATSS*YPDTGH
Trigger: GTGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTACAGCCGAGGTAGATaGATAGGATGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMYSRGR*IGWQRW
Trigger: CCATCTCTGCCATCCTATTCATCTACCTCGGCTGTA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNWCQWG*SIEHGC
Trigger: ACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGACCGTTTTGGGGATCTaGTTGGACACTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMTVLGI*LDTFHG
Trigger: CCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGCTTTAGCTGTTTCTaGACCATGTCCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSCFSCF*TMSRVE
Trigger: CTCAACCCTGGACATGGTTCAGAAACAGCTAAAGCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGGAGGGCATTCTTTCTaGTCCGGAAATCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAGGHSF*SGNLLL
Trigger: CAGGAGGAGATTTCCGGATCAGAAAGAATGCCCTCC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGGTTCCGTGAGTAGCTaGAAGCAGGTGAAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFGSVSS*KQVKLD
Trigger: GTCCAGCTTCACCTGCTTTCAGCTACTCACGGAACC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCTGGTCTCGAACTCCTaGGCTCAGGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFLVSNS*AQAIHL
Trigger: CAGGTGAATTGCCTGAGCTCAGGAGTTCGAGACCAG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTGGTCTCGAACTCCTaGGCTCAGGCAATTCACCTG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLVSNS*AQAIHL
Trigger: CAGGTGAATTGCCTGAGCTCAGGAGTTCGAGACCAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGGTCTCCGTCATGCTaGAGAGTATCCATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSWSPSC*RVSISV
Trigger: TACAGAGATGGATACTCTGCAGCATGACGGAGACCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGGTCTCCGTCATGCTaGAGAGTATCCATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAWSPSC*RVSISV
Trigger: TACAGAGATGGATACTCTGCAGCATGACGGAGACCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAGCTCGAAGAGGCTGTaGAGGGATAGTGTGGACACG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSSKRL*RDSVDT
Trigger: CGTGTCCACACTATCCCTGCACAGCCTCTTCGAGCT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGCTCGAAGAGGCTGTaGAGGGATAGTGTGGACACG +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSSKRL*RDSVDT
Trigger: CGTGTCCACACTATCCCTGCACAGCCTCTTCGAGCT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCAGACGTCCGTAATTTaGACTCTGCCGCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIQTSVI*TLPHPQ
Trigger: CTGCGGATGCGGCAGAGTGCAAATTACGGACGTCTG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGTCATTCATGCTTCTaGTCTGGGCATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSCHSCF*SGHDTD
Trigger: GTCTGTGTCATGCCCAGAGCAGAAGCATGAATGACA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAATCTACCATGAGGGTTaGAATGGCACGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSIYHEG*NGTANF
Trigger: GAAATTGGCCGTGCCATTGCAACCCTCATGGTAGAT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGAGCCAGCCATGGCAGTaGCCAGGAAGCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMSQPWQ*PGSSPS
Trigger: TGATGGAGAGCTTCCTGGGCACTGCCATGGCTGGCT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCATCAGGAAGAGCTTaGAGCGTTCCCAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAASGRA*SVPRTG
Trigger: TCCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGAGGCCAGAACCACTTaGTCTGTTCCACAGTATGTG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMEARTT*SVPQYV
Trigger: CACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCCCCAGTGGACTTTTTaGAGGCCTGAAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNPQWTF*RPERCP
Trigger: GGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGGCCAGTCAGTTCCTaGTGTGGCTGGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGPVSS*CGWSGR
Trigger: GCGGCCAGACCAGCCACAGCAGGAACTGACTGGCCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATGACACTGGGCACATaGAGCTTGGGAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMMTLGT*SLGVSR
Trigger: CCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCAGGAAGAGCTTaGAGCGTTCCCAGAATGGAG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNASGRA*SVPRME
Trigger: CTCCATTCTGGGAACGCTGCAAGCTCTTCCTGATGC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGCCATCTCAGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSAISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCTGAGATGGC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTTGCCTAGGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLPRLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCCTAGGCAA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAAAGTAAGTGTCAGATaGACTGTGGCTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAKVSVR*TVAVRV
Trigger: GACCCTGACAGCCACAGTGCATCTGACACTTACTTT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACTCCTGTGGTTAGTGTaGTCCAGCTTTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALLWLV*SSFPTP
Trigger: TGGGGTAGGAAAGCTGGACCACACTAACCACAGGAG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTCCTGTGGTTAGTGTaGTCCAGCTTTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLLWLV*SSFPTP
Trigger: TGGGGTAGGAAAGCTGGACCACACTAACCACAGGAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCCTTCCACTCCATCTaGTCTCCGTCATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASFHSI*SPSCCR
Trigger: TCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCAAACTTTATCCACCTaGCTGACTCCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAQTLST*LTPSTP
Trigger: TGGAGTGGAAGGAGTCAGCCAGGTGGATAAAGTTTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKPLPEL*PQETIL
Trigger: GAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCAGCTAAGGAGCGGTaGATGGGCTTCTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASAKER*MGFLVW
Trigger: CCAAACCAAGAAGCCCATCCACCGCTCCTTAGCTGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCAGGACTGCGATTTGTaGTGGAGACTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMQDCDL*WRLTSQ
Trigger: TTGGGAAGTCAGTCTCCACCACAAATCGCAGTCCTG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGAGGTCTTCCGTGGAGTaGTGTAGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMRSSVE*CRLGPA
Trigger: TGCTGGCCCGAGTCTACACCACTCCACGGAAGACCT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTCAATCCGGATATTTaGGTCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLNPDI*VPFSRR
Trigger: CCTCCTGGAGAATGGGACCCAAATATCCGGATTGAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGAGGGCACCTTCTTaGGGGGCTCAATCCGGATAT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQRAPS*GAQSGY
Trigger: ATATCCGGATTGAGCCCCCCAAGAAGGTGCCCTCTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCAGAGGGCACCTTCTTaGGGGGCTCAATCCGGATAT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIQRAPS*GAQSGY
Trigger: ATATCCGGATTGAGCCCCCCAAGAAGGTGCCCTCTG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAACAGAGCCATTCATCTaGCCCAGCTCTGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWETEPFI*PSSARE
Trigger: CTCCCTAGCAGAGCTGGGCCAGATGAATGGCTCTGT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCCTGATAATTGTCGGTaGCATCCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSPDNCR*HPPEAH
Trigger: GTGGGCTTCTGGGGGATGCCACCGACAATTATCAGG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGCCTGATAATTGTCGGTaGCATCCCCCAGAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWPDNCR*HPPEAH
Trigger: GTGGGCTTCTGGGGGATGCCACCGACAATTATCAGG...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATGTACAGAGAAGCGTTaGTGTCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNACTEKR*CLVPMG
Trigger: CCCCATTGGCACCAGACACCAACGCTTCTCTGTACA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACATGAGCGCCAGGTCTaGGATAAACTTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSHERQV*DKLAGI
Trigger: AATTCCTGCAAGTTTATCCCAGACCTGGCGCTCATG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCAGGCCAGGTCGTGCTaGGAAAAGATGAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMQARSC*EKMKSR
Trigger: TCTGGATTTCATCTTTTCCCAGCACGACCTGGCCTG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACAGGTGGTACAATATTaGCTGCCCCAGATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSQVVQY*LPQILV
Trigger: GACAAGAATCTGGGGCAGCCAATATTGTACCACCTG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACCAAGCTTTGGCAGGTaGTACAATATTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAPSFGR*YNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAACTGGAAGCCCAATGTaGATAGGAGGGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSTGSPM*IGGHSF
Trigger: GAAAGAATGCCCTCCTATCCACATTGGGCTTCCAGT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACTCTATCTTCACCTGTaGCACCATGAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLYLHL*HHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGTGCCACTGTGCCCGGCTGGTTCAAACTTTTCATATAACCCTTCGGTCAAGTCCCCAGTCACACTTCTaGAGCAAGGCCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: VCHCARLVQTFHITLRSSPQSHF*SKAHNA
Trigger: TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGG...ACTTGACCGAAGGGTTATATGAAAAGTTTGAACCAGCCGGGCACAGTGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480696.1
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCACTGGCTTTTCAATCTaGGAAAGCCCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKATGFSI*ESPSHT
Trigger: AGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCTTGGCAGTATCCCTTaGAAGGGAGCTCTGAGATTA +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALGSIP*KGALRL
Trigger: TAATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACTTGGCAGTATCCCTTaGAAGGGAGCTCTGAGATTA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLGSIP*KGALRL
Trigger: TAATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACCTCCTTCACCTTCATaGCTTTGTGTTCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSPPSPS*LCVLSS
Trigger: AGAGCTAAGAACACAAAGTCATGAAGGTGAAGGAGG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGTCTGTGTTTGGGGTaGGAGAAATGTCATTCATGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGLCLG*EKCHSC
Trigger: GCATGAATGACATTTCTCTCACCCCAAACACAGACC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCACGTTGGACGCTTCTaGGTCCTTGGGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFHVGRF*VLGDLL
Trigger: AAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACACGTTGGACGCTTCTaGGTCCTTGGGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEHVGRF*VLGDLL
Trigger: AAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGAGATCATCTACCATaGGGGTTGCAATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWRDHLP*GLQWHG
Trigger: GCCGTGCCATTGCAACCCTCATGGTAGATGATCTCT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAAGGGCAACTTCCTCTTaGTATCCAGACACAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWERATSS*YPDTGH
Trigger: GTGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGCCATTGCCTTTGCTaGAGTCGAAGAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGHCLC*SRRGAS
Trigger: AGAAGCTCCTCTTCGACTTCAGCAAAGGCAATGGCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCCATTGCCTTTGCTaGAGTCGAAGAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWGHCLC*SRRGAS
Trigger: AGAAGCTCCTCTTCGACTTCAGCAAAGGCAATGGCC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATGGGGCTGAAGCATTaGACACGGTTGTATTCACTG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMMGLKH*TRLYSL
Trigger: CAGTGAATACAACCGTGTTCAATGCTTCAGCCCCAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEWCQWG*SIEHGC
Trigger: ACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAACCGTTTTGGGGATCTaGTTGGACACTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNATVLGI*LDTFHG
Trigger: CCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGAAGGGAACATACTGTaGTGGTGTCAGCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAEGNIL*WCQHSA
Trigger: TGCAGAGTGCTGACACCATCACAGTATGTTCCCTTC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000423644.5
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGAGGGCATTCTTTCTaGTCCGGAAATCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGGHSF*SGNLLL
Trigger: CAGGAGGAGATTTCCGGATCAGAAAGAATGCCCTCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGGAGGGCATTCTTTCTaGTCCGGAAATCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEGGHSF*SGNLLL
Trigger: CAGGAGGAGATTTCCGGATCAGAAAGAATGCCCTCC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTGGATTTTGAATTCTaGCCCTCCGGTCCCCATCTG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLDFEF*PSGPHL
Trigger: CAGATGGGGACCGGAGGGTCAGAATTCAAAATCCAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR TCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGTAGCTGAAAGCAGGTaGAGCTGGACAGGATATTTT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAVAESR*SWTGYF
Trigger: AAAATATCCTGTCCAGCTTCACCTGCTTTCAGCTAC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATGGACACGTGGGGCTTaGTCCAGCGTTCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKWTRGA*SSVRRL
Trigger: AAGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGAGAAATGTCATTCATaGTTCTGCTCTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSEKCHS*FCSGHD
Trigger: GTCATGCCCAGAGCAGAAGCATGAATGACATTTCTC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCAGATCTTCCCGATTaGGGGCTTTGTAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSDLPD*GLCRPR
Trigger: ACGTGGCCTACAAAGCCCGCAATCGGGAAGATCTGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTCAGATCTTCCCGATTaGGGGCTTTGTAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSDLPD*GLCRPR
Trigger: ACGTGGCCTACAAAGCCCGCAATCGGGAAGATCTGA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSSPIS*MAGISP
Trigger: TGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSSPIS*MAGISP
Trigger: TGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTCAGACACTCCTTCTTaGTCAGCAGGGACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWSDTPS*SAGTSP
Trigger: TGGACTGGTCCCTGCTGAGCAAGAAGGAGTGTCTGA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCGGGCAGGATGCTTaGTGGGTATACCCACCACGG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGGQDA*WVYPPR
Trigger: CCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGCATCAGGAAGAGCTTaGAGCGTTCCCAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEASGRA*SVPRTG
Trigger: TCCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGGTACAATATTGGCTaGCCCAGATTCTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSWYNIG*PRFLSA
Trigger: AGCAGACAAGAATCTGGGGCAGCCAATATTGTACCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGAGGCCAGAACCACTTaGTCTGTTCCACAGTATGTG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNEARTT*SVPQYV
Trigger: CACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCCCCAGTGGACTTTTTaGAGGCCTGAAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFPQWTF*RPERCP
Trigger: GGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCCCCAGTGGACTTTTTaGAGGCCTGAAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIPQWTF*RPERCP
Trigger: GGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATATGACACTGGGCACATaGAGCTTGGGAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNMTLGT*SLGVSR
Trigger: CCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCAT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCTCCCTGGCTGGAGTaGAGTGGCATGATTATAGCT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASPWLE*SGMIIA
Trigger: AGCTATAATCATGCCACTGCACTCCAGCCAGGGAGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCTCCTGTGGTTAGTGTaGTCCAGCTTTCCTACCCCA +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGILLWLV*SSFPTP
Trigger: TGGGGTAGGAAAGCTGGACCACACTAACCACAGGAG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCCTTCCACTCCATCTaGTCTCCGTCATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSFHSI*SPSCCR
Trigger: TCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCTTCCACTCCATCTaGTCTCCGTCATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWESFHSI*SPSCCR
Trigger: TCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCTAAGGAGCGGTGGATaGGCTTCTTGGTTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMLRSGG*ASWFGG
Trigger: GCCACCAAACCAAGAAGCCCATCCACCGCTCCTTAG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCAGCTAAGGAGCGGTaGATGGGCTTCTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSAKER*MGFLVW
Trigger: CCAAACCAAGAAGCCCATCCACCGCTCCTTAGCTGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCAGCTAAGGAGCGGTaGATGGGCTTCTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSAKER*MGFLVW
Trigger: CCAAACCAAGAAGCCCATCCACCGCTCCTTAGCTGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCTCAGCTAAGGAGCGGTaGATGGGCTTCTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGISAKER*MGFLVW
Trigger: CCAAACCAAGAAGCCCATCCACCGCTCCTTAGCTGA...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGACTGCGATTTGTGGTaGAGACTGACTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMDCDLW*RLTSQC
Trigger: ACATTGGGAAGTCAGTCTCCACCACAAATCGCAGTC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACAGGACTGCGATTTGTaGTGGAGACTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAQDCDL*WRLTSQ
Trigger: TTGGGAAGTCAGTCTCCACCACAAATCGCAGTCCTG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAACGCGATGAATGGCTaGTCTAGGAAGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSNAMNG*SRKSTS
Trigger: CGAGGTGGACTTCCTAGACCAGCCATTCATCGCGTT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAACGCGATGAATGGCTaGTCTAGGAAGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFNAMNG*SRKSTS
Trigger: CGAGGTGGACTTCCTAGACCAGCCATTCATCGCGTT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAAACGCGATGAATGGCTaGTCTAGGAAGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWENAMNG*SRKSTS
Trigger: CGAGGTGGACTTCCTAGACCAGCCATTCATCGCGTT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACCCCGATTTCATGCATaGCTGGCATCTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAPRFHA*LASLHH
Trigger: ATGATGGAGAGATGCCAGCCATGCATGAAATCGGGG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCCCCGATTTCATGCATaGCTGGCATCTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNPRFHA*LASLHH
Trigger: ATGATGGAGAGATGCCAGCCATGCATGAAATCGGGG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATAGGATGGCAGAGATaGACTGAATGTGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAIGWQR*TECGSH
Trigger: ATGGCTTCCACATTCAGTCCATCTCTGCCATCCTAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTGTACAGAGAAGCGTTaGTGTCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFCTEKR*CLVPMG
Trigger: CCCCATTGGCACCAGACACCAACGCTTCTCTGTACA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCTGTACAGAGAAGCGTTaGTGTCTGGTGCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGICTEKR*CLVPMG
Trigger: CCCCATTGGCACCAGACACCAACGCTTCTCTGTACA...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATCAGGGTCAGGGTCATaGAGTATGTCCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSGSGS*SMSQRK
Trigger: TTTTCTTTGGGACATACTCCATGACCCTGACCCTGA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTCGGTCAGGCCGCGTTaGCTTGGTAGGAAAATAGCG +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMSVRPR*LGRKIA
Trigger: CGCTATTTTCCTACCAAGCCAACGCGGCCTGACCGA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCAGTGGATACCGTTTTaGGGATCTGATTGGACACTT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAQWIPF*GSDWTL
Trigger: AAGTGTCCAATCAGATCCCCAAAACGGTATCCACTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTTTCTGGCAATGCAGTaGATACCGTTTTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAFLAMQ*IPFWGS
Trigger: AGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCCAAGCTTTGGCAGGTaGTACAATATTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSPSFGR*YNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGCCAAGCTTTGGCAGGTaGTACAATATTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWPSFGR*YNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGG...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGTTTGTGCCAAGCTTTaGCAGGTGGTACAATATTGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAVCAKL*QVVQYW
Trigger: CCAATATTGTACCACCTGCCAAAGCTTGGCACAAAC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTTCTTTGAGGGTAAGTaGGTACTGGAAGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAFFEGK*VLEAQC
Trigger: ACATTGGGCTTCCAGTACCCACTTACCCTCAAAGAA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGATGGAGAAAACAATaGAAAAGTCAGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGWRKQ*KSQPPG
Trigger: CCCTGGTGGCTGACTTTTCCATTGTTTTCTCCATCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGGGCACATGCAGCTTaGGAGTTTCTAGGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNWAHAA*EFLGQN
Trigger: GTTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCAGCGTTCCCAGAATaGAGTCAGCTTCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAAAFPE*SQLLLD
Trigger: ATCCAGAAGAAGCTGACTCCATTCTGGGAACGCTGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCCCCAGTCACACTTCTaGAGCAAGGCCCATAATGCA +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSPQSHF*SKAHNA
Trigger: TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGACTGGCTTTTCAATCTaGGAAAGCCCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMTGFSI*ESPSHT
Trigger: AGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACATCAGCCTCTGAAATaGCTGGGACTACAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAHQPLK*LGLQVC
Trigger: ACACACCTGTAGTCCCAGCCATTTCAGAGGCTGATG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACTGGCTGGAGTGCAGTaGCATGATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALAGVQ*HDYSSL
Trigger: CAGTGAGCTATAATCATGCCACTGCACTCCAGCCAG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGGCTGGAGTGCAGTaGCATGATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLAGVQ*HDYSSL
Trigger: CAGTGAGCTATAATCATGCCACTGCACTCCAGCCAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCTTACACTCCCACCTaGGTGGTCTTCAGGGTACTC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSYTPT*VVFRVL
Trigger: GAGTACCCTGAAGACCACCCAGGTGGGAGTGTAAGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTACAGCCGAGGTAGATaGATAGGATGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSYSRGR*IGWQRW
Trigger: CCATCTCTGCCATCCTATTCATCTACCTCGGCTGTA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATACAGCCGAGGTAGATaGATAGGATGGCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEYSRGR*IGWQRW
Trigger: CCATCTCTGCCATCCTATTCATCTACCTCGGCTGTA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATGGGGCTGAAGCATTaGACACGGTTGTATTCACTG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAMGLKH*TRLYSL
Trigger: CAGTGAATACAACCGTGTTCAATGCTTCAGCCCCAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTACCGTTTTGGGGATCTaGTTGGACACTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSTVLGI*LDTFHG
Trigger: CCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCACCGTTTTGGGGATCTaGTTGGACACTTTCCATGGG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGITVLGI*LDTFHG
Trigger: CCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGT...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGACTTTTTGCAGGCCTaGAAGATGTCCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIDFLQA*KMSLLV
Trigger: GACCAGAAGGGACATCTTTCAGGCCTGCAAAAAGTC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTAGCTGAAAGCAGGTaGAGCTGGACAGGATATTTT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMVAESR*SWTGYF
Trigger: AAAATATCCTGTCCAGCTTCACCTGCTTTCAGCTAC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATGGTCTCCGTCATGCTaGAGAGTATCCATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAWSPSC*RVSISV
Trigger: TACAGAGATGGATACTCTGCAGCATGACGGAGACCA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCTCCGGGCAGGACTaGGATTTGTGGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGSGQD*DLWWRL
Trigger: CAGTCTCCACCACAAATCGCAGTCCTGCCCGGAGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGTCATTCATGCTTCTaGTCTGGGCATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNCHSCF*SGHDTD
Trigger: GTCTGTGTCATGCCCAGAGCAGAAGCATGAATGACA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATCTACCATGAGGGTTaGAATGGCACGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAIYHEG*NGTANF
Trigger: GAAATTGGCCGTGCCATTGCAACCCTCATGGTAGAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMSSPIS*MAGISP
Trigger: TGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATCCAGGCCAGGTCGTaGTGGGAAAAGATGAAATCC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFIQARS*WEKMKS
Trigger: GGATTTCATCTTTTCCCAGCACGACCTGGCCTGGAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATCCAGGCCAGGTCGTaGTGGGAAAAGATGAAATCC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEIQARS*WEKMKS
Trigger: GGATTTCATCTTTTCCCAGCACGACCTGGCCTGGAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATCTTTTTCTGGCAATaGAGTGGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAIFFWQ*SGYRFG
Trigger: CCCAAAACGGTATCCACTGCATTGCCAGAAAAAGAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGAGGCCAGAACCACTTaGTCTGTTCCACAGTATGTG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIEARTT*SVPQYV
Trigger: CACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAAAGTAAGTGTCAGATaGACTGTGGCTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNKVSVR*TVAVRV
Trigger: GACCCTGACAGCCACAGTGCATCTGACACTTACTTT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCTCCCTGGCTGGAGTaGAGTGGCATGATTATAGCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSPWLE*SGMIIA
Trigger: AGCTATAATCATGCCACTGCACTCCAGCCAGGGAGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCAAACTTTATCCACCTaGCTGACTCCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNQTLST*LTPSTP
Trigger: TGGAGTGGAAGGAGTCAGCCAGGTGGATAAAGTTTG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCTTCTTGGTTTGGTaGCGGTGCCTCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGFLVW*RCLLRR
Trigger: CCTCCTGAGGAGGCACCGCCACCAAACCAAGAAGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGTGGATGGGCTTCTTaGTTTGGTGGCGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGGWAS*FGGGAS
Trigger: GGAGGCACCGCCACCAAACCAAGAAGCCCATCCACC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGACTGCGATTTGTGGTaGAGACTGACTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNDCDLW*RLTSQC
Trigger: ACATTGGGAAGTCAGTCTCCACCACAAATCGCAGTC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCAGGACTGCGATTTGTaGTGGAGACTGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIQDCDL*WRLTSQ
Trigger: TTGGGAAGTCAGTCTCCACCACAAATCGCAGTCCTG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCTCAATCCGGATATTTaGGTCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGILNPDI*VPFSRR
Trigger: CCTCCTGGAGAATGGGACCCAAATATCCGGATTGAG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACCCCGATTTCATGCATaGCTGGCATCTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEPRFHA*LASLHH
Trigger: ATGATGGAGAGATGCCAGCCATGCATGAAATCGGGG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTACTAGGATAAGGCACTaGACAGCTGAGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSTRIRH*TAECRP
Trigger: TGGCCTACACTCAGCTGTCCAGTGCCTTATCCTAGT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTACTAGGATAAGGCACTaGACAGCTGAGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFTRIRH*TAECRP
Trigger: TGGCCTACACTCAGCTGTCCAGTGCCTTATCCTAGT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACATGAGCGCCAGGTCTaGGATAAACTTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAHERQV*DKLAGI
Trigger: AATTCCTGCAAGTTTATCCCAGACCTGGCGCTCATG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCAGGGTCAGGGTCATaGAGTATGTCCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSGSGS*SMSQRK
Trigger: TTTTCTTTGGGACATACTCCATGACCCTGACCCTGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACAGGCCAGGTCGTGCTaGGAAAAGATGAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEQARSC*EKMKSR
Trigger: TCTGGATTTCATCTTTTCCCAGCACGACCTGGCCTG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCAGTGGATACCGTTTTaGGGATCTGATTGGACACTT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMQWIPF*GSDWTL
Trigger: AAGTGTCCAATCAGATCCCCAAAACGGTATCCACTG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGGAAGATCTTTTTCTaGCAATGCAGTGGATACCGT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSWKIFF*QCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGGAAGATCTTTTTCTaGCAATGCAGTGGATACCGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAWKIFF*QCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTTGTGCCAAGCTTTaGCAGGTGGTACAATATTGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMVCAKL*QVVQYW
Trigger: CCAATATTGTACCACCTGCCAAAGCTTGGCACAAAC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATACTGGAAGCCCAATGTaGATAGGAGGGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNTGSPM*IGGHSF
Trigger: GAAAGAATGCCCTCCTATCCACATTGGGCTTCCAGT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGAGCTGCTCAGCAGCTaGGGACCGAGTCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKELLSS*GPSPAD
Trigger: ATCAGCAGGACTCGGTCCCCAGCTGCTGAGCAGCTC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACTTGGCAGTATCCCTTaGAAGGGAGCTCTGAGATTA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALGSIP*KGALRL
Trigger: TAATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTGGCTGGAGTGCAGTaGCATGATTATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLAGVQ*HDYSSL
Trigger: CAGTGAGCTATAATCATGCCACTGCACTCCAGCCAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACCTCCTTCACCTTCATaGCTTTGTGTTCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAPPSPS*LCVLSS
Trigger: AGAGCTAAGAACACAAAGTCATGAAGGTGAAGGAGG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGGTCTGTGTTTGGGGTaGGAGAAATGTCATTCATGC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEGLCLG*EKCHSC
Trigger: GCATGAATGACATTTCTCTCACCCCAAACACAGACC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCGCACGAACGCGATaGATGGCTGGTCTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGARTR*MAGLGS
Trigger: ACTTCCTAGACCAGCCATTCATCGCGTTCGTGCGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATGGGGCTGAAGCATTaGACACGGTTGTATTCACTG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFMGLKH*TRLYSL
Trigger: CAGTGAATACAACCGTGTTCAATGCTTCAGCCCCAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATGGGGCTGAAGCATTaGACACGGTTGTATTCACTG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEMGLKH*TRLYSL
Trigger: CAGTGAATACAACCGTGTTCAATGCTTCAGCCCCAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTGCTTTAGCTGTTTCTaGACCATGTCCAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFCFSCF*TMSRVE
Trigger: CTCAACCCTGGACATGGTTCAGAAACAGCTAAAGCA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGTAGCTGAAAGCAGGTaGAGCTGGACAGGATATTTT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAVAESR*SWTGYF
Trigger: AAAATATCCTGTCCAGCTTCACCTGCTTTCAGCTAC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAATTTATCCATGTCTGTaGAGTCATAGTCTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSIYPCL*SHSLTP
Trigger: TGGAGTCAGACTATGACTTCACAGACATGGATAAAT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGGTCTCCGTCATGCTaGAGAGTATCCATCTCTGTA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEWSPSC*RVSISV
Trigger: TACAGAGATGGATACTCTGCAGCATGACGGAGACCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGACCATCCTCAATCTaGTTCTCAATGACATCATCT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKARPSSI*FSMTSS
Trigger: AGATGATGTCATTGAGAAGCAGATTGAGGATGGTCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGTCATTCATGCTTCTaGTCTGGGCATGACACAGAC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWECHSCF*SGHDTD
Trigger: GTCTGTGTCATGCCCAGAGCAGAAGCATGAATGACA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTTCATTGTAGGATTTTaGTCTCCCAGAAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNFIVGF*SPRRSQ
Trigger: CTGGGACCTTCTGGGAGAGCAAAATCCTACAATGAA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATCTACCATGAGGGTTaGAATGGCACGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFIYHEG*NGTANF
Trigger: GAAATTGGCCGTGCCATTGCAACCCTCATGGTAGAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATCTACCATGAGGGTTaGAATGGCACGGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEIYHEG*NGTANF
Trigger: GAAATTGGCCGTGCCATTGCAACCCTCATGGTAGAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAAGCCAGCCATGGCAGTaGCCAGGAAGCTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSQPWQ*PGSSPS
Trigger: TGATGGAGAGCTTCCTGGGCACTGCCATGGCTGGCT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATCTTTTTCTGGCAATaGAGTGGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMIFFWQ*SGYRFG
Trigger: CCCAAAACGGTATCCACTGCATTGCCAGAAAAAGAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGGTACAATATTGGCTaGCCCAGATTCTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNWYNIG*PRFLSA
Trigger: AGCAGACAAGAATCTGGGGCAGCCAATATTGTACCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTAAAGTAAGTGTCAGATaGACTGTGGCTGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFKVSVR*TVAVRV
Trigger: GACCCTGACAGCCACAGTGCATCTGACACTTACTTT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATATGATTATAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNMIIAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTATAATCAT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATGATTATAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAMIIAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTATAATCAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGAAATCTCCTCCTGTaGTTAGTGTGGTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGNLLL*LVWSSF
Trigger: AAAGCTGGACCACACTAACCACAGGAGGAGATTTCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACAAACTTTATCCACCTaGCTGACTCCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEQTLST*LTPSTP
Trigger: TGGAGTGGAAGGAGTCAGCCAGGTGGATAAAGTTTG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGACTGCGATTTGTGGTaGAGACTGACTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSDCDLW*RLTSQC
Trigger: ACATTGGGAAGTCAGTCTCCACCACAAATCGCAGTC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGACTGCGATTTGTGGTaGAGACTGACTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIDCDLW*RLTSQC
Trigger: ACATTGGGAAGTCAGTCTCCACCACAAATCGCAGTC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAAGGTCTTCCGTGGAGTaGTGTAGACTCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKRSSVE*CRLGPA
Trigger: TGCTGGCCCGAGTCTACACCACTCCACGGAAGACCT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATCATAGAAGTCACTTaGGAACCAGGGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAIIEVT*EPGQLP
Trigger: AGGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGACTAGGATAAGGCACTaGACAGCTGAGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMTRIRH*TAECRP
Trigger: TGGCCTACACTCAGCTGTCCAGTGCCTTATCCTAGT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCATGAGCGCCAGGTCTaGGATAAACTTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFHERQV*DKLAGI
Trigger: AATTCCTGCAAGTTTATCCCAGACCTGGCGCTCATG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGGTGGTACAATATTaGCTGCCCCAGATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQVVQY*LPQILV
Trigger: GACAAGAATCTGGGGCAGCCAATATTGTACCACCTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGACTGGAAGCCCAATGTaGATAGGAGGGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWTGSPM*IGGHSF
Trigger: GAAAGAATGCCCTCCTATCCACATTGGGCTTCCAGT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATTCTTTGAGGGTAAGTaGGTACTGGAAGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAFFEGK*VLEAQC
Trigger: ACATTGGGCTTCCAGTACCCACTTACCCTCAAAGAA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGGATGGAGAAAACAATaGAAAAGTCAGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFGWRKQ*KSQPPG
Trigger: CCCTGGTGGCTGACTTTTCCATTGTTTTCTCCATCC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTCTATCTTCACCTGTaGCACCATGAACACTGGGTT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLYLHL*HHEHWV
Trigger: AACCCAGTGTTCATGGTGCCACAGGTGAAGATAGAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCTTCATCCTAGAGGGTaGTCTCACTGTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFLHPRG*SHCQFL
Trigger: GAGAAACTGACAGTGAGACCACCCTCTAGGATGAAG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTACTGGCTTTTCAATCTaGGAAAGCCCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFTGFSI*ESPSHT
Trigger: AGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCTTCAGGGTACTCCTaGAAACATCCATCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASSGYS*KHPSAH
Trigger: ATGAGCTGATGGATGTTTCCAGGAGTACCCTGAAGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACAGCAACTCTTTATCTaGAAGGTTATCTTACACTCC +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSQQLFI*KVILHS
Trigger: GGAGTGTAAGATAACCTTCCAGATAAAGAGTTGCTG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR TCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCCTCCTTCACCTTCATaGCTTTGTGTTCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIPPSPS*LCVLSS
Trigger: AGAGCTAAGAACACAAAGTCATGAAGGTGAAGGAGG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATCACCTGTGGCACCATaGACACTGGGTTCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSPVAP*TLGSVS
Trigger: ACTCACGGAACCCAGTGTTCATGGTGCCACAGGTGA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGAAGGGAACATACTGTaGTGGTGTCAGCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFEGNIL*WCQHSF
Trigger: AAAAGAGTGCTGACACCATCACAGTATGTTCCCTTC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACAGACGTCCGTAATTTaGACTCTGCCGCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKQTSVI*TLPHPQ
Trigger: CTGCGGATGCGGCAGAGTGCAAATTACGGACGTCTG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGAGAAATGTCATTCATaGTTCTGCTCTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSEKCHS*FCSGHD
Trigger: GTCATGCCCAGAGCAGAAGCATGAATGACATTTCTC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGAGAAATGTCATTCATaGTTCTGCTCTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIEKCHS*FCSGHD
Trigger: GTCATGCCCAGAGCAGAAGCATGAATGACATTTCTC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATTCATTGTAGGATTTTaGTCTCCCAGAAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEFIVGF*SPRRSQ
Trigger: CTGGGACCTTCTGGGAGAGCAAAATCCTACAATGAA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAAATTCATCAATTCCTaGGATCAGATCTTCCCGATT +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSKFINS*DQIFPI
Trigger: AATCGGGAAGATCTGATCGCAGGAATTGATGAATTT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATCTTTTTCTGGCAATaGAGTGGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAIFFWQ*SGYRFG
Trigger: CCCAAAACGGTATCCACTGCATTGCCAGAAAAAGAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGGTACAATATTGGCTaGCCCAGATTCTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEWYNIG*PRFLSA
Trigger: AGCAGACAAGAATCTGGGGCAGCCAATATTGTACCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATTGCCTAGGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKLPRLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCCTAGGCAA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTATGATTATAGCTCACTaGAGCCTTGAACTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSMIIAH*SLELLD
Trigger: GTCCAGGAGTTCAAGGCTGCAGTGAGCTATAATCAT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACAGAGGGCACCTTCTTaGGGGGCTCAATCCGGATAT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKQRAPS*GAQSGY
Trigger: ATATCCGGATTGAGCCCCCCAAGAAGGTGCCCTCTG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATCATAGAAGTCACTTaGGAACCAGGGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFIIEVT*EPGQLP
Trigger: AGGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTATCATAGAAGTCACTTaGGAACCAGGGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSIIEVT*EPGQLP
Trigger: AGGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGAT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGATCATAGAAGTCACTTaGGAACCAGGGCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWIIEVT*EPGQLP
Trigger: AGGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGAT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATAGGATGGCAGAGATaGACTGAATGTGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFIGWQR*TECGSH
Trigger: ATGGCTTCCACATTCAGTCCATCTCTGCCATCCTAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCATGAGCGCCAGGTCTaGGATAAACTTGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMHERQV*DKLAGI
Trigger: AATTCCTGCAAGTTTATCCCAGACCTGGCGCTCATG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCAGGGTCAGGGTCATaGAGTATGTCCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWESGSGS*SMSQRK
Trigger: TTTTCTTTGGGACATACTCCATGACCCTGACCCTGA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCAGTGGATACCGTTTTaGGGATCTGATTGGACACTT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSQWIPF*GSDWTL
Trigger: AAGTGTCCAATCAGATCCCCAAAACGGTATCCACTG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCAGTGGATACCGTTTTaGGGATCTGATTGGACACTT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIQWIPF*GSDWTL
Trigger: AAGTGTCCAATCAGATCCCCAAAACGGTATCCACTG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTTTCTGGCAATGCAGTaGATACCGTTTTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSFLAMQ*IPFWGS
Trigger: AGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGGAAGATCTTTTTCTaGCAATGCAGTGGATACCGT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNWKIFF*QCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATGGAAGATCTTTTTCTaGCAATGCAGTGGATACCGT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAWKIFF*QCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMVSNSN*KIFFWQ
Trigger: TTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCAC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCAGGTGGTACAATATTaGCTGCCCCAGATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMQVVQY*LPQILV
Trigger: GACAAGAATCTGGGGCAGCCAATATTGTACCACCTG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGTTTGTGCCAAGCTTTaGCAGGTGGTACAATATTGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSVCAKL*QVVQYW
Trigger: CCAATATTGTACCACCTGCCAAAGCTTGGCACAAAC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTTCTTTGAGGGTAAGTaGGTACTGGAAGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFFFEGK*VLEAQC
Trigger: ACATTGGGCTTCCAGTACCCACTTACCCTCAAAGAA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATTCTTTGAGGGTAAGTaGGTACTGGAAGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEFFEGK*VLEAQC
Trigger: ACATTGGGCTTCCAGTACCCACTTACCCTCAAAGAA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCACAGAACATCAGGATaGAGAAAACAATGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAHRTSG*RKQWKS
Trigger: ACTTTTCCATTGTTTTCTCCATCCTGATGTTCTGTG...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCACTACACTAGACGCTaGGAATTACAGAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNHYTRR*ELQRQL
Trigger: TAATTGCCTCTGTAATTCCCAGCGTCTAGTGTAGTG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATTGTTTATAAGACATaGATTCCAGCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMIVYKT*IPAVSL
Trigger: CAGGGAGACAGCTGGAATCCATGTCTTATAAACAAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAAGAGATCATCTACCATaGGGGTTGCAATGGCACGGC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKRDHLP*GLQWHG
Trigger: GCCGTGCCATTGCAACCCTCATGGTAGATGATCTCT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKWCQWG*SIEHGC
Trigger: ACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAAGACCATCCTCAATCTaGTTCTCAATGACATCATCT +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNARPSSI*FSMTSS
Trigger: AGATGATGTCATTGAGAAGCAGATTGAGGATGGTCT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGCATCAGGAAGAGCTTaGAGCGTTCCCAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKASGRA*SVPRTG
Trigger: TCCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTATCTTTTTCTGGCAATaGAGTGGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSIFFWQ*SGYRFG
Trigger: CCCAAAACGGTATCCACTGCATTGCCAGAAAAAGAT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATCTTTTTCTGGCAATaGAGTGGATACCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEIFFWQ*SGYRFG
Trigger: CCCAAAACGGTATCCACTGCATTGCCAGAAAAAGAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGTTCCACAGTATGTaGAATTTTTGGCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLFHSM*NFWLPD
Trigger: ATCTGGAAGCCAAAAATTGCACATACTGTGGAACAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATCCTTCCACTCCATCTaGTCTCCGTCATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSFHSI*SPSCCR
Trigger: TCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGATAGGATGGCAGAGATaGACTGAATGTGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMIGWQR*TECGSH
Trigger: ATGGCTTCCACATTCAGTCCATCTCTGCCATCCTAT...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGTAGTGATGAAGTTTaGCTTGAAGTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGSDEV*LEVHID
Trigger: ATCAATATGGACTTCAAGCCAAACTTCATCACTACC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTTTCTGGCAATGCAGTaGATACCGTTTTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMFLAMQ*IPFWGS
Trigger: AGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTGGAAGATCTTTTTCTaGCAATGCAGTGGATACCGT +
Preference number: 4 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWWKIFF*QCSGYR
Trigger: ACGGTATCCACTGCATTGCCAGAAAAAGATCTTCCA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAVSNSN*KIFFWQ
Trigger: TTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCAC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACCAAGCTTTGGCAGGTaGTACAATATTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKPSFGR*YNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTTTGTGCCAAGCTTTaGCAGGTGGTACAATATTGG +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMVCAKL*QVVQYW
Trigger: CCAATATTGTACCACCTGCCAAAGCTTGGCACAAAC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGAGTATGTGCAATTTTTaGCTTCCAGATTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSMCNF*LPDCLC
Trigger: GCACAAACAATCTGGAAGCCAAAAATTGCACATACT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATCATTAACAGAGTTTTaGAACTGGCTTTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSLTEF*NWLFNL
Trigger: CAGATTGAAAAGCCAGTTCCAAAACTCTGTTAATGA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCACTACACTAGACGCTaGGAATTACAGAGGCAATTA +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSHYTRR*ELQRQL
Trigger: TAATTGCCTCTGTAATTCCCAGCGTCTAGTGTAGTG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATTGTTTATAAGACATaGATTCCAGCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAIVYKT*IPAVSL
Trigger: CAGGGAGACAGCTGGAATCCATGTCTTATAAACAAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCAGACCATCCTCAATCTaGTTCTCAATGACATCATCT +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIRPSSI*FSMTSS
Trigger: AGATGATGTCATTGAGAAGCAGATTGAGGATGGTCT...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTGTTCCACAGTATGTaGAATTTTTGGCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLFHSM*NFWLPD
Trigger: ATCTGGAAGCCAAAAATTGCACATACTGTGGAACAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACTGTTCCACAGTATGTaGAATTTTTGGCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWELFHSM*NFWLPD
Trigger: ATCTGGAAGCCAAAAATTGCACATACTGTGGAACAG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACCCCGATTTCATGCATaGCTGGCATCTCTCCATCAT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKPRFHA*LASLHH
Trigger: ATGATGGAGAGATGCCAGCCATGCATGAAATCGGGG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAACTAGGATAAGGCACTaGACAGCTGAGTGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKTRIRH*TAECRP
Trigger: TGGCCTACACTCAGCTGTCCAGTGCCTTATCCTAGT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACAGGCCAGGTCGTGCTaGGAAAAGATGAAATCCAGA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKQARSC*EKMKSR
Trigger: TCTGGATTTCATCTTTTCCCAGCACGACCTGGCCTG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSVSNSN*KIFFWQ
Trigger: TTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCAC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIVSNSN*KIFFWQ
Trigger: TTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCAC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGTGAGTAACTCCAACTaGAAGATCTTTTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFVSNSN*KIFFWQ
Trigger: TTGCCAGAAAAAGATCTTCCAGTTGGAGTTACTCAC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CCA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAGTATGTGCAATTTTTaGCTTCCAGATTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSMCNF*LPDCLC
Trigger: GCACAAACAATCTGGAAGCCAAAAATTGCACATACT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCATTAACAGAGTTTTaGAACTGGCTTTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSLTEF*NWLFNL
Trigger: CAGATTGAAAAGCCAGTTCCAAAACTCTGTTAATGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGTCTGTGTTTGGGGTaGGAGAAATGTCATTCATGC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGLCLG*EKCHSC
Trigger: GCATGAATGACATTTCTCTCACCCCAAACACAGACC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAATCTGGTCTCCGTCATaGTGCAGAGTATCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKIWSPS*CRVSIS
Trigger: AGAGATGGATACTCTGCAGCATGACGGAGACCAGAT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAAATTCATCAATTCCTaGGATCAGATCTTCCCGATT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSKFINS*DQIFPI
Trigger: AATCGGGAAGATCTGATCGCAGGAATTGATGAATTT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAAAATTCATCAATTCCTaGGATCAGATCTTCCCGATT +
Preference number: 4 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEKFINS*DQIFPI
Trigger: AATCGGGAAGATCTGATCGCAGGAATTGATGAATTT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGGTAGTGATGAAGTTTaGCTTGAAGTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFGSDEV*LEVHID
Trigger: ATCAATATGGACTTCAAGCCAAACTTCATCACTACC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGTAGTGATGAAGTTTaGCTTGAAGTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGSDEV*LEVHID
Trigger: ATCAATATGGACTTCAAGCCAAACTTCATCACTACC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACAGGTGGTACAATATTaGCTGCCCCAGATTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKQVVQY*LPQILV
Trigger: GACAAGAATCTGGGGCAGCCAATATTGTACCACCTG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAGTATGTGCAATTTTTaGCTTCCAGATTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSMCNF*LPDCLC
Trigger: GCACAAACAATCTGGAAGCCAAAAATTGCACATACT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCAGTATGTGCAATTTTTaGCTTCCAGATTGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGISMCNF*LPDCLC
Trigger: GCACAAACAATCTGGAAGCCAAAAATTGCACATACT...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAACTGGAAGCCCAATGTaGATAGGAGGGCATTCTTTC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKTGSPM*IGGHSF
Trigger: GAAAGAATGCCCTCCTATCCACATTGGGCTTCCAGT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCACAGAACATCAGGATaGAGAAAACAATGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSHRTSG*RKQWKS
Trigger: ACTTTTCCATTGTTTTCTCCATCCTGATGTTCTGTG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACTTCATCCTAGAGGGTaGTCTCACTGTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKLHPRG*SHCQFL
Trigger: GAGAAACTGACAGTGAGACCACCCTCTAGGATGAAG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAACTGGCTTTTCAATCTaGGAAAGCCCCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKTGFSI*ESPSHT
Trigger: AGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR TCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACCTCCTTCACCTTCATaGCTTTGTGTTCTTAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKPPSPS*LCVLSS
Trigger: AGAGCTAAGAACACAAAGTCATGAAGGTGAAGGAGG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGAGAAATGTCATTCATaGTTCTGCTCTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKEKCHS*FCSGHD
Trigger: GTCATGCCCAGAGCAGAAGCATGAATGACATTTCTC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATTCATTGTAGGATTTTaGTCTCCCAGAAGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKFIVGF*SPRRSQ
Trigger: CTGGGACCTTCTGGGAGAGCAAAATCCTACAATGAA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGTAGTGATGAAGTTTaGCTTGAAGTCCATATTGAT +
Preference number: 4 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMGSDEV*LEVHID
Trigger: ATCAATATGGACTTCAAGCCAAACTTCATCACTACC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATCAGGGTCAGGGTCATaGAGTATGTCCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSGSGS*SMSQRK
Trigger: TTTTCTTTGGGACATACTCCATGACCCTGACCCTGA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCATTAACAGAGTTTTaGAACTGGCTTTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSLTEF*NWLFNL
Trigger: CAGATTGAAAAGCCAGTTCCAAAACTCTGTTAATGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR GCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACTGTTCCACAGTATGTaGAATTTTTGGCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKLFHSM*NFWLPD
Trigger: ATCTGGAAGCCAAAAATTGCACATACTGTGGAACAG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CCA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAATTGTTTATAAGACATaGATTCCAGCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKIVYKT*IPAVSL
Trigger: CAGGGAGACAGCTGGAATCCATGTCTTATAAACAAT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS GCA 90 bp GGTCCCTGGCTGTCGATGCTGCCTCTGGCCCCAGCCTGCTTCCGCTaGTGCCTCCCTGGCTGCTACTTCCACAGGTCCTCTTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: GPWLSMLPLAPACFR*CLPGCYFHRSSSSH
Trigger: GTGTGAAGAAGAGGACCTGTGGAAGTAGCAGCCAGGGAGGCAGCAGCGGAAGCAGGCTGGGGCCAGAGGCAGCATCGACAGCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432728.1
CDS GCA 90 bp CCCTGGCTGTCGATGCTGCCTCTGGCCCCAGCCTGCTTCCGCTGCTaGCTCCCTGGCTGCTACTTCCACAGGTCCTCTTCTTCACACAAC +
Preference number: 5 (lower is better)
Translates to: PWLSMLPLAPACFRC*LPGCYFHRSSSSHN
Trigger: GTTGTGTGAAGAAGAGGACCTGTGGAAGTAGCAGCCAGGGAGGCAGCAGCGGAAGCAGGCTGGGGCCAGAGGCAGCATCGACAGCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432728.1
CDS CCA 90 bp ACAGACGTCCGTAATTTGCACTCTGCCGCATCCGCAGGTCTTCCGTaGAGTGGTGTAGACTCGGGCCAGCACCAGGGCTCCGGGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TDVRNLHSAASAGLP*SGVDSGQHQGSGQD
Trigger: GTCCTGCCCGGAGCCCTGGTGCTGGCCCGAGTCTACACCACTCCACGGAAGACCTGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 90 bp CTGGTGGGGACAGGCACCTCGGTCACTCCTCCCAGCATGGCCGACTaGATGAGGCGCACGAACGCGATGAATGGCTGGTCTAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LVGTGTSVTPPSMAD*MRRTNAMNGWSRKS
Trigger: GGACTTCCTAGACCAGCCATTCATCGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGGAGGAGTGACCGAGGTGCCTGTCCCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS GCA 90 bp GGACCGAGTCCTGCTGATAAGATCCATGCTGCTGTCCTGGCTGCTTaGCCCACTCCCTGGGCCAGTCAGTTCCTGCTGTGGCTGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GPSPADKIHAAVLAA*PTPWASQFLLWLVW
Trigger: CCAGACCAGCCACAGCAGGAACTGACTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGATCTTATCAGCAGGACTCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000444570.5
CDS TCA 90 bp TGGGCTTCTTGGTTTGGTGGCGGTGCCTCCTCAGGAGGACGTAACTaGCCCTCTCCCGGAGCTCTGGCCGCAGGAGACCATCCTCAATCT +
Preference number: 5 (lower is better)
Translates to: WASWFGGGASSGGRN*PSPGALAAGDHPQS
Trigger: AGATTGAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGGGTCAGTTACGTCCTCCTGAGGAGGCACCGCCACCAAACCAAGAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS GCA 90 bp TGTGGTAAGGAGCCACTGTCCAAATCCAGCAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCGAAGAGGCTGTGCAGGGATAGTGTG +
Preference number: 5 (lower is better)
Translates to: CGKEPLSKSSSTVPV*RQVRSSKRLCRDSV
Trigger: CACACTATCCCTGCACAGCCTCTTCGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCTGCTGGATTTGGACAGTGGCTCCTTACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS CCA 90 bp CATGAAGATCAGGATGGTCACCAGCAGGGCGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTTCTTCCCAAAGGGGGCCACGAACCA +
Preference number: 5 (lower is better)
Translates to: HEDQDGHQQGGQDAC*VYPPRVLPKGGHEP
Trigger: TGGTTCGTGGCCCCCTTTGGGAAGAACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGCTGGTGACCATCCTGATCTTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGTGGACACGTGGGGCTaGCTCCAGCGTTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAVDTWG*LQRSPP
Trigger: AGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCAC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATGCTGTCCTGGCTGCTaGCCCCACTCCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSCCPGC*PHSLGQ
Trigger: CTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 90 bp GCGGTGCCTCCTCAGGAGGACGTAACTGACCCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTCAATCTGCTTCTCAATGACATCATC +
Preference number: 5 (lower is better)
Translates to: AVPPQEDVTDPLPEL*PQETILNLLLNDII
Trigger: GATGATGTCATTGAGAAGCAGATTGAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGGGTCAGTTACGTCCTCCTGAGGAGGCACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTGGACACGTGGGGCTaGCTCCAGCGTTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMVDTWG*LQRSPP
Trigger: AGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCAC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS GCA 90 bp CAGACACAGGCCACCGAAGAACCTGCTCAAGACAGGCCCAGGGGCTaGTTTCTCACCACTAACACCAGTGCAGGGGCAGGGCTATTTACA +
Preference number: 5 (lower is better)
Translates to: QTQATEEPAQDRPRG*FLTTNTSAGAGLFT
Trigger: TGTAAATAGCCCTGCCCCTGCACTGGTGTTAGTGGTGAGAAAGCAGCCCCTGGGCCTGTCTTGAGCAGGTTCTTCGGTGGCCTGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGGTCCGGCTGGTGCTaGGCTGGCATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAWSGWC*AGIRKS
Trigger: GCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGCTGTCCTGGCTGCTaGCCCCACTCCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNCCPGC*PHSLGQ
Trigger: CTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS GCA 90 bp CCACCGAAGAACCTTCCTGTCCAGATAAGTTCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCATCATCCCCGCTGCTTGTTCCGCCG +
Preference number: 5 (lower is better)
Translates to: PPKNLPVQISSSPIS*MAGISPSSPLLVPP
Trigger: CGGCGGAACAAGCAGCGGGGATGATGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGAACTTATCTGGACAGGAAGGTTCTTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGATGGGCTTCTTGGTTaGGTGGCGGTGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKADGLLG*VAVPPQ
Trigger: CTGAGGAGGCACCGCCACCAAACCAAGAAGCCCATC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGGCGGGCAGGATGCTaGCTGGGTATACCCACCACG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGRAGC*LGIPTT
Trigger: CGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGCTGTCCTGGCTGCTaGCCCCACTCCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWECCPGC*PHSLGQ
Trigger: CTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATCAGGCCGCGTTGGCTaGATGACACTGGGCACATGC +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSSGRVG*MTLGTC
Trigger: GCATGTGCCCAGTGTCATCAAGCCAACGCGGCCTGA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS TCA 90 bp ACAGTATGGTCTCTCCAGGGAAGAGGTCACAGAAACTGGTTACAGTaGTGCTTCCTGGGAGGGGAACTTGGAGGTCGGGGCTCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: TVWSLQGRGHRNWLQ*CFLGGELGGRGSGN
Trigger: GTTCCCTGAGCCCCGACCTCCAAGTTCCCCTCCCAGGAAGCATCACTGTAACCAGTTTCTGTGACCTCTTCCCTGGAGAGACCATACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS GCA 90 bp AGCTCTGGAAACCAGGATCCAAATCCCAGGGAGGCCAGAACCACTTaGTCTGTTCCTGTTGGGTGGCAAGAAGGGCTCTCTGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: SSGNQDPNPREARTT*SVPVGWQEGLSVVS
Trigger: GGAAACCACAGAGAGCCCTTCTTGCCACCCAACAGGAACAGAGCAAGTGGTTCTGGCCTCCCTGGGATTTGGATCCTGGTTTCCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444570.5
CDS GCA 90 bp CTCACCACTAACACCAGTGCAGGGGCAGGGCTATTTACAAGAACTTaGAGAGTCTGGGGCGAGGAAAGGAACTTGACCAGGGTGGATGGG +
Preference number: 5 (lower is better)
Translates to: LTTNTSAGAGLFTRT*RVWGEERNLTRVDG
Trigger: CCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTTCTTGTAAATAGCCCTGCCCCTGCACTGGTGTTAGTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTGGACACGTGGGGCTaGCTCCAGCGTTCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMVDTWG*LQRSPP
Trigger: AGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCAC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGATGGGCTTCTTGGTTaGGTGGCGGTGCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMDGLLG*VAVPPQ
Trigger: CTGAGGAGGCACCGCCACCAAACCAAGAAGCCCATC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACGGTGGATGGGCTTCTaGGTTTGGTGGCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNARWMGF*VWWRCL
Trigger: GAGGCACCGCCACCAAACCAAGAAGCCCATCCACCG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGGCAGGACTGCGATTaGTGGTGGAGACTGACTTCC +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGQDCD*WWRLTS
Trigger: GGAAGTCAGTCTCCACCACAAATCGCAGTCCTGCCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGGGCGGGCAGGATGCTaGCTGGGTATACCCACCACG +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSGRAGC*LGIPTT
Trigger: CGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGGGCGGGCAGGATGCTaGCTGGGTATACCCACCACG +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIGRAGC*LGIPTT
Trigger: CGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATGGTCCGGCTGGTGCTaGGCTGGCATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAWSGWC*AGIRKS
Trigger: GCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 90 bp GGAGTATGTCCCAAAGAAAAGGATGAAGGACATGAGCGCCAGGTCTaGGATAAACTTGCAGGAATTCCCAAGCAGGCGCCCGCCGTAGCT +
Preference number: 5 (lower is better)
Translates to: GVCPKEKDEGHERQV*DKLAGIPKQAPAVA
Trigger: AGCTACGGCGGGCGCCTGCTTGGGAATTCCTGCAAGTTTATCCCAGACCTGGCGCTCATGTCCTTCATCCTTTTCTTTGGGACATACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 90 bp AACACCAGTGCAGGGGCAGGGCTATTTACAAGAACTTGCAGAGTCTaGGGCGAGGAAAGGAACTTGACCAGGGTGGATGGGGCAAAGATC +
Preference number: 5 (lower is better)
Translates to: NTSAGAGLFTRTCRV*GEERNLTRVDGAKI
Trigger: GATCTTTGCCCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTTCTTGTAAATAGCCCTGCCCCTGCACTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCGGTGGATGGGCTTCTaGGTTTGGTGGCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFRWMGF*VWWRCL
Trigger: GAGGCACCGCCACCAAACCAAGAAGCCCATCCACCG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAACAGACGTCCGTAATTaGCACTCTGCCGCATCCGCA +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSTDVRN*HSAASA
Trigger: TGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCACAGACGTCCGTAATTaGCACTCTGCCGCATCCGCA +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKATDVRN*HSAASA
Trigger: TGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGIRKS*QRSQNW
Trigger: CCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGGTCCGGCTGGTGCTaGGCTGGCATCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEWSGWC*AGIRKS
Trigger: GCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTTCTCTGGGAGGATGTaGTCAATCCAGGCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAFSGRM*SIQARS
Trigger: CGACCTGGCCTGGATTGACAACATCCTCCCAGAGAA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTCTCTGGGAGGATGTaGTCAATCCAGGCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSFSGRM*SIQARS
Trigger: CGACCTGGCCTGGATTGACAACATCCTCCCAGAGAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAATGGA +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGIRKS*QRSQNG
Trigger: TCCATTCTGGGAACGCTGCAAGCTCTTCCTGATGCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS TCA 90 bp AGAGCTTGCAGCGTTCCCAGAATGGAGTCAGCTTCTTCTGGATTTTaGATTCTGACCCTCCGGTCCCCATCTGGATGCCATTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RACSVPRMESASSGF*ILTLRSPSGCHSGR
Trigger: CCTCCCTGAATGGCATCCAGATGGGGACCGGAGGGTCAGAATTCAAAATCCAGAAGAAGCTGACTCCATTCTGGGAACGCTGCAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000377634.8
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCGGTGGATGGGCTTCTaGGTTTGGTGGCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMRWMGF*VWWRCL
Trigger: GAGGCACCGCCACCAAACCAAGAAGCCCATCCACCG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGGCAGGACTGCGATTaGTGGTGGAGACTGACTTCC +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGQDCD*WWRLTS
Trigger: GGAAGTCAGTCTCCACCACAAATCGCAGTCCTGCCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCGCCCACGAGCACGTaGGACGCTTCTGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSPTST*DASESL
Trigger: CAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCGCCCACGAGCACGTaGGACGCTTCTGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSPTST*DASESL
Trigger: CAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCTCGCCCACGAGCACGTaGGACGCTTCTGAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGISPTST*DASESL
Trigger: CAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCGA...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACAGGGCAACTTCCTCTaGATATCCAGACACAGGCCA +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSQGNFL*ISRHRP
Trigger: TGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCTG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTTGTACAGAGAAGCGTaGGTGTCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKALYREA*VSGANG
Trigger: CCCATTGGCACCAGACACCAACGCTTCTCTGTACAA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGGAGGCCAGAACCACTaGCTCTGTTCCACAGTATGT +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAGGQNH*LCSTVC
Trigger: ACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTCC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGGAGGCCAGAACCACTaGCTCTGTTCCACAGTATGT +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSGGQNH*LCSTVC
Trigger: ACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTCC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCAGGCCGCGTTGGCTaGATGACACTGGGCACATGC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSGRVG*MTLGTC
Trigger: GCATGTGCCCAGTGTCATCAAGCCAACGCGGCCTGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCAGGCCGCGTTGGCTaGATGACACTGGGCACATGC +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSGRVG*MTLGTC
Trigger: GCATGTGCCCAGTGTCATCAAGCCAACGCGGCCTGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS TCA 90 bp AAGGAGGTTGTACAGAGAAGCGTTGGTGTCTGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGTATTCACTGTGTCAGGGGCGACACA +
Preference number: 5 (lower is better)
Translates to: KEVVQRSVGVWCQWG*SIEHGCIHCVRGDT
Trigger: TGTGTCGCCCCTGACACAGTGAATACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCAGACACCAACGCTTCTCTGTACAACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 90 bp AACTTGCAGAGTCTGGGGCGAGGAAAGGAACTTGACCAGGGTGGATaGGGCAAAGATCTTTCCACCAGAACATTTAGGGCCAGGGATGAA +
Preference number: 5 (lower is better)
Translates to: NLQSLGRGKELDQGG*GKDLSTRTFRARDE
Trigger: TTCATCCCTGGCCCTAAATGTTCTGGTGGAAAGATCTTTGCCCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGGGCAGGACTGCGATTaGTGGTGGAGACTGACTTCC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFGQDCD*WWRLTS
Trigger: GGAAGTCAGTCTCCACCACAAATCGCAGTCCTGCCC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAACACAGATTTCCTCTaGTCAGCAGAGGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKANTDFL*SAEGTF
Trigger: GAAGGTGCCCTCTGCTGACAAGAGGAAATCTGTGTT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTCCAGGCCATTGCCTTaGCTGAAGTCGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNSRPLP*LKSKRS
Trigger: GCTCCTCTTCGACTTCAGCAAAGGCAATGGCCTGGA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGGTCTGGGATAAACTaGCAGGAATTCCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKARSGIN*QEFPSR
Trigger: CCTGCTTGGGAATTCCTGCAAGTTTATCCCAGACCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGCAGCCTTCTTCAGTTaGTTCTCCTTCCGGTTGACA +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSAAFFS*FSFRLT
Trigger: TGTCAACCGGAAGGAGAACAAACTGAAGAAGGCTGC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGCAGCCTTCTTCAGTTaGTTCTCCTTCCGGTTGACA +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAAAFFS*FSFRLT
Trigger: TGTCAACCGGAAGGAGAACAAACTGAAGAAGGCTGC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEGIRKS*QRSQNW
Trigger: CCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGCC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGCAGGTGGTACAATATaGGCTGCCCCAGATTCTTGT +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSAGGTI*AAPDSC
Trigger: ACAAGAATCTGGGGCAGCCAATATTGTACCACCTGC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGGCTTCCAGATTGTTaGTGCCAAGCTTTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAWLPDC*CQALAG
Trigger: ACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATGCTGTCCTGGCTGCTaGCCCCACTCCCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKCCPGC*PHSLGQ
Trigger: CTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCTGGGCACATGCAGCTaGGGAGTTTCTAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMLGTCS*GVSRPK
Trigger: TTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 90 bp TTTTCCTTCTCTGGGAGGATGTTGTCAATCCAGGCCAGGTCGTGCTaGGAAAAGATGAAATCCAGAAGCCTTCGAACGATGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: FSFSGRMLSIQARSC*EKMKSRSLRTMMRP
Trigger: GGGCCTCATCATCGTTCGAAGGCTTCTGGATTTCATCTTTTCCCAGCACGACCTGGCCTGGATTGACAACATCCTCCCAGAGAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
ENST00000637036.1
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGGCAGGACTGCGATTaGTGGTGGAGACTGACTTCC +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMGQDCD*WWRLTS
Trigger: GGAAGTCAGTCTCCACCACAAATCGCAGTCCTGCCC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTACAGACGTCCGTAATTaGCACTCTGCCGCATCCGCA +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSTDVRN*HSAASA
Trigger: TGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGACAGACGTCCGTAATTaGCACTCTGCCGCATCCGCA +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWTDVRN*HSAASA
Trigger: TGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCTCAATCCGGATATTaGGGTCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNAQSGY*GPILQE
Trigger: CTCCTGGAGAATGGGACCCAAATATCCGGATTGAGC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCAGGGCAACTTCCTCTaGATATCCAGACACAGGCCA +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNQGNFL*ISRHRP
Trigger: TGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCTG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGCATCATAGAAGTCACTaGGGAACCAGGGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMHHRSH*GTRATS
Trigger: GGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGATG...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTCCAGGCCATTGCCTTaGCTGAAGTCGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSSRPLP*LKSKRS
Trigger: GCTCCTCTTCGACTTCAGCAAAGGCAATGGCCTGGA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTCCAGGCCATTGCCTTaGCTGAAGTCGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFSRPLP*LKSKRS
Trigger: GCTCCTCTTCGACTTCAGCAAAGGCAATGGCCTGGA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCAGGCCATTGCCTTaGCTGAAGTCGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWESRPLP*LKSKRS
Trigger: GCTCCTCTTCGACTTCAGCAAAGGCAATGGCCTGGA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATTGTACAGAGAAGCGTaGGTGTCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALYREA*VSGANG
Trigger: CCCATTGGCACCAGACACCAACGCTTCTCTGTACAA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGCAGCCTTCTTCAGTTaGTTCTCCTTCCGGTTGACA +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMAAFFS*FSFRLT
Trigger: TGTCAACCGGAAGGAGAACAAACTGAAGAAGGCTGC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGAACCATGTCCAGGGTaGAGAAGGGAACATACTGTG +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMEPCPG*RREHTV
Trigger: CACAGTATGTTCCCTTCTCAACCCTGGACATGGTTC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGGCTGCCCCAGATTCTaGTCTGCTTTAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMGCPRF*SALAVS
Trigger: AGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTGGCTTCCAGATTGTTaGTGCCAAGCTTTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMWLPDC*CQALAG
Trigger: ACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGAGGCCAGAACCACTaGCTCTGTTCCACAGTATGT +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGGQNH*LCSTVC
Trigger: ACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCACTGGTCAGTTTTTCTTaGAGGGTAAGTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSLVSFS*RVSGYW
Trigger: CCAGTACCCACTTACCCTCAAAGAAAAACTGACCAG...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGGGCACATGCAGCTaGGGAGTTTCTAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLGTCS*GVSRPK
Trigger: TTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCACTGGGCACATGCAGCTaGGGAGTTTCTAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALGTCS*GVSRPK
Trigger: TTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAG...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCAGCTTCTTCTGGATTTaGAATTCTGACCCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKASFFWI*NSDPPV
Trigger: GACCGGAGGGTCAGAATTCAAAATCCAGAAGAAGCT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000346834.8
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTCTTGGCAGTATCCCTaGGAAGGGAGCTCTGAGATT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMSWQYP*EGSSEI
Trigger: AATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAGA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 90 bp GCAGCAACTCTTTATCTGGAAGGTTATCTTACACTCCCACCTGGGTaGTCTTCAGGGTACTCCTGGAAACATCCATCAGCTCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: AATLYLEGYLTLPPG*SSGYSWKHPSAHEL
Trigger: GAGCTCATGAGCTGATGGATGTTTCCAGGAGTACCCTGAAGACCACCCAGGTGGGAGTGTAAGATAACCTTCCAGATAAAGAGTTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377634.8
ENST00000394019.6
ENST00000436454.1
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACGGTGGATGGGCTTCTaGGTTTGGTGGCGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKRWMGF*VWWRCL
Trigger: GAGGCACCGCCACCAAACCAAGAAGCCCATCCACCG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGACGCTTCTGAGTCCTaGGGGATCTTCTTCATGAAT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMDASES*GIFFMN
Trigger: ATTCATGAAGAAGATCCCCAAGGACTCAGAAGCGTC...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTTCATTGTAGGATTTaGCTCTCCCAGAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSFHCRI*LSQKVP
Trigger: TGGGACCTTCTGGGAGAGCAAAATCCTACAATGAAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGCTCAATCCGGATATTaGGGTCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWAQSGY*GPILQE
Trigger: CTCCTGGAGAATGGGACCCAAATATCCGGATTGAGC...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAAACACAGATTTCCTCTaGTCAGCAGAGGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNANTDFL*SAEGTF
Trigger: GAAGGTGCCCTCTGCTGACAAGAGGAAATCTGTGTT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATAACACAGATTTCCTCTaGTCAGCAGAGGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNNTDFL*SAEGTF
Trigger: GAAGGTGCCCTCTGCTGACAAGAGGAAATCTGTGTT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGGGCAACTTCCTCTaGATATCCAGACACAGGCCA +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQGNFL*ISRHRP
Trigger: TGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAATGGGGCTGAAGCATaGAACACGGTTGTATTCACT +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSNGAEA*NTVVFT
Trigger: AGTGAATACAACCGTGTTCAATGCTTCAGCCCCATT...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTTTGTACAGAGAAGCGTaGGTGTCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLYREA*VSGANG
Trigger: CCCATTGGCACCAGACACCAACGCTTCTCTGTACAA...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTTGTACAGAGAAGCGTaGGTGTCTGGTGCCAATGGG +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWLYREA*VSGANG
Trigger: CCCATTGGCACCAGACACCAACGCTTCTCTGTACAA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATTGTTCTCCTTCCGGTaGACAATGACGGCAGTGATC +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNALFSFR*TMTAVI
Trigger: GATCACTGCCGTCATTGTCAACCGGAAGGAGAACAA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTTGTTCTCCTTCCGGTaGACAATGACGGCAGTGATC +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLFSFR*TMTAVI
Trigger: GATCACTGCCGTCATTGTCAACCGGAAGGAGAACAA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTTCTCTGGGAGGATGTaGTCAATCCAGGCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMFSGRM*SIQARS
Trigger: CGACCTGGCCTGGATTGACAACATCCTCCCAGAGAA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGAACCATGTCCAGGGTaGAGAAGGGAACATACTGTG +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAEPCPG*RREHTV
Trigger: CACAGTATGTTCCCTTCTCAACCCTGGACATGGTTC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGGCTGCCCCAGATTCTaGTCTGCTTTAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNGCPRF*SALAVS
Trigger: AGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCC...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGCAGGTGGTACAATATaGGCTGCCCCAGATTCTTGT +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAAGGTI*AAPDSC
Trigger: ACAAGAATCTGGGGCAGCCAATATTGTACCACCTGC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCTGTTTGTGCCAAGCTTaGGCAGGTGGTACAATATTG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKACLCQA*AGGTIL
Trigger: CAATATTGTACCACCTGCCAAAGCTTGGCACAAACA...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGGCTTCCAGATTGTTaGTGCCAAGCTTTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNWLPDC*CQALAG
Trigger: ACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCATTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSFLASR*FVPSFG
Trigger: GCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAA...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGGAGGCCAGAACCACTaGCTCTGTTCCACAGTATGT +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIGGQNH*LCSTVC
Trigger: ACATACTGTGGAACAGAGCAAGTGGTTCTGGCCTCC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCGCTGGACAGGATATTTaGAAGTGCAAGGTGATGCTT +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAAGQDI*KCKVML
Trigger: AAGCATCACCTTGCACTTCAAAATATCCTGTCCAGC...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGCTGGACAGGATATTTaGAAGTGCAAGGTGATGCTT +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSAGQDI*KCKVML
Trigger: AAGCATCACCTTGCACTTCAAAATATCCTGTCCAGC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMTDSLC*IKKETG
Trigger: GCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATCTTGGCAGTATCCCTaGGAAGGGAGCTCTGAGATT +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNASWQYP*EGSSEI
Trigger: AATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAGA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 90 bp GAAGGTTATCTTACACTCCCACCTGGGTGGTCTTCAGGGTACTCCTaGAAACATCCATCAGCTCATGAGCTCACAGCTGAATTCCAAATC +
Preference number: 5 (lower is better)
Translates to: EGYLTLPPGWSSGYS*KHPSAHELTAEFQI
Trigger: GATTTGGAATTCAGCTGTGAGCTCATGAGCTGATGGATGTTTCCAGGAGTACCCTGAAGACCACCCAGGTGGGAGTGTAAGATAACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377634.8
ENST00000394019.6
ENST00000436454.1
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGACGCTTCTGAGTCCTaGGGGATCTTCTTCATGAAT +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNADASES*GIFFMN
Trigger: ATTCATGAAGAAGATCCCCAAGGACTCAGAAGCGTC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAACACAGATTTCCTCTaGTCAGCAGAGGGCACCTTC +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWNTDFL*SAEGTF
Trigger: GAAGGTGCCCTCTGCTGACAAGAGGAAATCTGTGTT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCAGGGCAACTTCCTCTaGATATCCAGACACAGGCCA +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMQGNFL*ISRHRP
Trigger: TGGCCTGTGTCTGGATATCAAGAGGAAGTTGCCCTG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCATCATAGAAGTCACTaGGGAACCAGGGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFHHRSH*GTRATS
Trigger: GGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGATG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCATCATAGAAGTCACTaGGGAACCAGGGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSHHRSH*GTRATS
Trigger: GGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGATG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAACATCATAGAAGTCACTaGGGAACCAGGGCAACTTCC +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEHHRSH*GTRATS
Trigger: GGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGATG...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGTGATGAAGTTTGGCTaGAAGTCCATATTGATAGGG +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSVMKFG*KSILIG
Trigger: CCCTATCAATATGGACTTCAAGCCAAACTTCATCAC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAGGTCTGGGATAAACTaGCAGGAATTCCCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWRSGIN*QEFPSR
Trigger: CCTGCTTGGGAATTCCTGCAAGTTTATCCCAGACCT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATTGTTCTCCTTCCGGTaGACAATGACGGCAGTGATC +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWELFSFR*TMTAVI
Trigger: GATCACTGCCGTCATTGTCAACCGGAAGGAGAACAA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGGCTGCCCCAGATTCTaGTCTGCTTTAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIGCPRF*SALAVS
Trigger: AGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGCAGGTGGTACAATATaGGCTGCCCCAGATTCTTGT +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSAGGTI*AAPDSC
Trigger: ACAAGAATCTGGGGCAGCCAATATTGTACCACCTGC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCGCAGGTGGTACAATATaGGCTGCCCCAGATTCTTGT +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGIAGGTI*AAPDSC
Trigger: ACAAGAATCTGGGGCAGCCAATATTGTACCACCTGC...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTGGCTTCCAGATTGTTaGTGCCAAGCTTTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWWLPDC*CQALAG
Trigger: ACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGTTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMFLASR*FVPSFG
Trigger: GCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAA...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATCTGGTCAGTTTTTCTTaGAGGGTAAGTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNLVSFS*RVSGYW
Trigger: CCAGTACCCACTTACCCTCAAAGAAAAACTGACCAG...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGAACTGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCATCTTCTTCATGAATTaGTTTTTCCGCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WNWLFNLGKPQSHFWSKAIFFMN*FFRWSV
Trigger: CACAGACCAGCGGAAAAACAAATTCATGAAGAAGAT...GGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCAGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCATTTCATTGTAGGATTTaGCTCTCCCAGAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAFHCRI*LSQKVP
Trigger: TGGGACCTTCTGGGAGAGCAAAATCCTACAATGAAA...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGIRKS*QRSQNW
Trigger: CCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATTGTTTGTGCCAAGCTTaGGCAGGTGGTACAATATTG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNCLCQA*AGGTIL
Trigger: CAATATTGTACCACCTGCCAAAGCTTGGCACAAACA...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTCTGGTCAGTTTTTCTTaGAGGGTAAGTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSLVSFS*RVSGYW
Trigger: CCAGTACCCACTTACCCTCAAAGAAAAACTGACCAG...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCCTGGTCAGTTTTTCTTaGAGGGTAAGTGGGTACTGG +
Preference number: 5 (lower is better)
Translates to: AMQWIPFWGSDWTLSMGILVSFS*RVSGYW
Trigger: CCAGTACCCACTTACCCTCAAAGAAAAACTGACCAG...GATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGGTGTCAGCACTCTTTaGGTAGCAGCAACTCTTTAT +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAGVSTL*VAATLY
Trigger: ATAAAGAGTTGCTGCTACCAAAAGAGTGCTGACACC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394019.6
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATCTGTTCCCTTCAGTTaGTTCTCCTTCCGGTTGACA +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWESVPFS*FSFRLT
Trigger: TGTCAACCGGAAGGAGAACAAACTGAAGGGAACAGA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS GCA 90 bp TCCAGATTGTTTGTGCCAAGCTTTGGCAGGTGGTACAATATTGGCTaGCCCAGATTCTTGTCTGCTTTAGCTGTTTCTGAACCATGTCCA +
Preference number: 5 (lower is better)
Translates to: SRLFVPSFGRWYNIG*PRFLSALAVSEPCP
Trigger: TGGACATGGTTCAGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000483195.5
CDS CCA 90 bp TGGAAGGTTATCTTACACTCCCACCTGTGGACAAAAACAGAGATGTaGTTTGGGACAGTTACTCACCTCCCTGTGCTTATGTCACAGTTG +
Preference number: 5 (lower is better)
Translates to: WKVILHSHLWTKTEM*FGTVTHLPVLMSQL
Trigger: CAACTGTGACATAAGCACAGGGAGGTGAGTAACTGTCCCAAACCACATCTCTGTTTTTGTCCACAGGTGGGAGTGTAAGATAACCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATCTTCTTCATGAATTaGTTTTTCCGCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMIFFMN*FFRWSV
Trigger: CACAGACCAGCGGAAAAACAAATTCATGAAGAAGAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGACGCTTCTGAGTCCTaGGGGATCTTCTTCATGAAT +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMDASES*GIFFMN
Trigger: ATTCATGAAGAAGATCCCCAAGGACTCAGAAGCGTC...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGTTTCATTGTAGGATTTaGCTCTCCCAGAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWFHCRI*LSQKVP
Trigger: TGGGACCTTCTGGGAGAGCAAAATCCTACAATGAAA...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGTGATGAAGTTTGGCTaGAAGTCCATATTGATAGGG +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAVMKFG*KSILIG
Trigger: CCCTATCAATATGGACTTCAAGCCAAACTTCATCAC...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTAATGGGGCTGAAGCATaGAACACGGTTGTATTCACT +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSNGAEA*NTVVFT
Trigger: AGTGAATACAACCGTGTTCAATGCTTCAGCCCCATT...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGAATGGGGCTGAAGCATaGAACACGGTTGTATTCACT +
Preference number: 5 (lower is better)
Translates to: FWQCSGYRFGDLIGHFPWNGAEA*NTVVFT
Trigger: AGTGAATACAACCGTGTTCAATGCTTCAGCCCCATT...CCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATTCTCTGGGAGGATGTaGTCAATCCAGGCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKFSGRM*SIQARS
Trigger: CGACCTGGCCTGGATTGACAACATCCTCCCAGAGAA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTGTTTGTGCCAAGCTTaGGCAGGTGGTACAATATTG +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFCLCQA*AGGTIL
Trigger: CAATATTGTACCACCTGCCAAAGCTTGGCACAAACA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAATGTTTGTGCCAAGCTTaGGCAGGTGGTACAATATTG +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWECLCQA*AGGTIL
Trigger: CAATATTGTACCACCTGCCAAAGCTTGGCACAAACA...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTTTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFFLASR*FVPSFG
Trigger: GCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAA...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
47% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGACAAAGGGGAGAGCTTaGCATCTAAGCAATACTTTT +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMTKGRA*HLSNTF
Trigger: AAAAGTATTGCTTAGATGCAAAGCTCTCCCCTTTGT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGATCCACTCAGATGCATaGGTTCTTTCATTAACAGAG +
Preference number: 5 (lower is better)
Translates to: SIWESPSHTSGARPIMQMIHSDA*VLSLTE
Trigger: CTCTGTTAATGAAAGAACCAATGCATCTGAGTGGAT...CATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CAA 90 bp CTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAGTAATCAAACACTTATaGAGAGCTTTCTATGGACCA +
Preference number: 5 (lower is better)
Translates to: LGKPQSHFWSKAHNADGSVIKHL*RAFYGP
Trigger: TGGTCCATAGAAAGCTCTCAATAAGTGTTTGATTAC...TGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGCTCAATCCGGATATTaGGGTCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKAQSGY*GPILQE
Trigger: CTCCTGGAGAATGGGACCCAAATATCCGGATTGAGC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGTGATGAAGTTTGGCTaGAAGTCCATATTGATAGGG +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSVMKFG*KSILIG
Trigger: CCCTATCAATATGGACTTCAAGCCAAACTTCATCAC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAGTGATGAAGTTTGGCTaGAAGTCCATATTGATAGGG +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEVMKFG*KSILIG
Trigger: CCCTATCAATATGGACTTCAAGCCAAACTTCATCAC...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGTTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMFLASR*FVPSFG
Trigger: GCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAA...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATATAACCCTTAGGAAATaGGATGTGACAGGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNITLRK*DVTGRK
Trigger: TTTTCTCCCTGTCACATCCAATTTCCTAAGGGTTAT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TGGCTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATATCCACTCAGATGCATaGGTTCTTTCATTAACAGAG +
Preference number: 5 (lower is better)
Translates to: WLFNLGKPQSHFWSKAHNIHSDA*VLSLTE
Trigger: CTCTGTTAATGAAAGAACCAATGCATCTGAGTGGAT...ATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CAA 90 bp CTTTTCAATCTGGGAAAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAATCCACTCAGATGCATaGGTTCTTTCATTAACAGAG +
Preference number: 5 (lower is better)
Translates to: LFNLGKPQSHFWSKAHNAIHSDA*VLSLTE
Trigger: CTCTGTTAATGAAAGAACCAATGCATCTGAGTGGAT...TGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTTTCCCAGATTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
ENST00000480696.1
CDS-3UTR CAA 90 bp TGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGGGAAATCTTCTTCATGAATTaGTTTTTCCGCTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WQCSGYRFGDLIGHFPWEIFFMN*FFRWSV
Trigger: CACAGACCAGCGGAAAAACAAATTCATGAAGAAGAT...TTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATTGTTCTCCTTCCGGTaGACAATGACGGCAGTGATC +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKLFSFR*TMTAVI
Trigger: GATCACTGCCGTCATTGTCAACCGGAAGGAGAACAA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGAACCATGTCCAGGGTaGAGAAGGGAACATACTGTG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKEPCPG*RREHTV
Trigger: CACAGTATGTTCCCTTCTCAACCCTGGACATGGTTC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAGGCTGCCCCAGATTCTaGTCTGCTTTAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKGCPRF*SALAVS
Trigger: AGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCC...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTCAGTATGTGCAATTTTaGGCTTCCAGATTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFQYVQF*ASRLFV
Trigger: CACAAACAATCTGGAAGCCAAAAATTGCACATACTG...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTACAAAGGGGAGAGCTTaGCATCTAAGCAATACTTTT +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFTKGRA*HLSNTF
Trigger: AAAAGTATTGCTTAGATGCAAAGCTCTCCCCTTTGT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTATAACCCTTAGGAAATaGGATGTGACAGGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFITLRK*DVTGRK
Trigger: TTTTCTCCCTGTCACATCCAATTTCCTAAGGGTTAT...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAATCTTGGCAGTATCCCTaGGAAGGGAGCTCTGAGATT +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKSWQYP*EGSSEI
Trigger: AATCTCAGAGCTCCCTTCCAAGGGATACTGCCAAGA...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp TTTCTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTGGACACTTTCCATGCAGTATGTGCAATTTTaGGCTTCCAGATTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: FLAMQWIPFWGSDWTLSMQYVQF*ASRLFV
Trigger: CACAAACAATCTGGAAGCCAAAAATTGCACATACTG...CATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425249.6
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAAACGGACTCCCTCTGTTaGATAAAGAAGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKTDSLC*IKKETG
Trigger: GCCTGTTTCCTTCTTTATCAAACAGAGGGAGTCCGT...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp AAGCCCCAGTCACACTTCTGGAGCAAGGCCCATAATGCAGATGGTTCAAACTTTGTAATCAAACACTTATaGAGAGCTTTCTATGGACCA +
Preference number: 5 (lower is better)
Translates to: KPQSHFWSKAHNADGSNFVIKHL*RAFYGP
Trigger: TGGTCCATAGAAAGCTCTCAATAAGTGTTTGATTAC...AAAGTTTGAACCATCTGCATTATGGGCCTTGCTCCAGAAGTGTGACTGGGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GCAGGTGAAGCTGGACAGGATATTTTGAAGTGCAAGGTGATGCTTCGGTCAAGTGTAATCAAACACTTATaGAGAGCTTTCTATGGACCA +
Preference number: 5 (lower is better)
Translates to: AGEAGQDILKCKVMLRSSVIKHL*RAFYGP
Trigger: TGGTCCATAGAAAGCTCTCAATAAGTGTTTGATTAC...ACTTGACCGAAGCATCACCTTGCACTTCAAAATATCCTGTCCAGCTTCACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS-3UTR CAA 90 bp GTGGCTGTCAGGGTCATAGTAGGCATTAAATCAACATGGTTGGTGTTCATTAAACAGTATGTGCAATTTTaGGCTTCCAGATTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: VAVRVIVGIKSTWLVFIKQYVQF*ASRLFV
Trigger: CACAAACAATCTGGAAGCCAAAAATTGCACATACTG...TTTAATGAACACCAACCATGTTGATTTAATGCCTACTATGACCCTGACAGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346834.8
ENST00000394019.6
ENST00000423644.5
CDS CCA 72 bp ACCCTGCTCCCTGGAACAGCTGAGCGCTGGGGTCCCTaGCTGTCGATGCTGCCTCTGGCCCCAGCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: TLLPGTAERWGP*LSMLPLAPACF
Trigger: GAAGCAGGCTGGGGCCAGAGGCAGCATCGACAGCCAGGGACCCCAGCGCTCAGCTGTTCCAGGGAGCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432728.1
CDS GCA 72 bp AGCGGCACGTGCCGCAGGAAGGCATGGTCCGGCTGGTaGTTGGCTGGCATCAGGAAGAGCTTGCAGCGTTCC +
Preference number: 6 (lower is better)
Translates to: SGTCRRKAWSGW*LAGIRKSLQRS
Trigger: GGAACGCTGCAAGCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGCCTTCCTGCGGCACGTGCCGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
ENST00000637036.1
CDS CCA 72 bp TTTGCACTCTGCCGCATCCGCAGGTCTTCCGTGGAGTaGTGTAGACTCGGGCCAGCACCAGGGCTCCGGGCA +
Preference number: 6 (lower is better)
Translates to: FALCRIRRSSVE*CRLGPAPGLRA
Trigger: TGCCCGGAGCCCTGGTGCTGGCCCGAGTCTACACCACTCCACGGAAGACCTGCGGATGCGGCAGAGTGCAAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 72 bp GGCACGTGCCGCAGGAAGGCATGGTCCGGCTGGTGCTaGGCTGGCATCAGGAAGAGCTTGCAGCGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: GTCRRKAWSGWC*AGIRKSLQRSQ
Trigger: CTGGGAACGCTGCAAGCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCATGCCTTCCTGCGGCACGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
ENST00000637036.1
CDS TCA 72 bp TGGTTTGGTGGCGGTGCCTCCTCAGGAGGACGTAACTaGCCCTCTCCCGGAGCTCTGGCCGCAGGAGACCAT +
Preference number: 6 (lower is better)
Translates to: WFGGGASSGGRN*PSPGALAAGDH
Trigger: ATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGGGTCAGTTACGTCCTCCTGAGGAGGCACCGCCACCAAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS GCA 72 bp GAGCCACTGTCCAAATCCAGCAGCACCGTCCCCGTCTaGAGGCAGGTACGGAGCTCGAAGAGGCTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: EPLSKSSSTVPV*RQVRSSKRLCR
Trigger: CCTGCACAGCCTCTTCGAGCTCCGTACCTGCCTGCAGACGGGGACGGTGCTGCTGGATTTGGACAGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS GCA 72 bp TCGATGCTGCCTCTGGCCCCAGCCTGCTTCCGCTGCTaGCTCCCTGGCTGCTACTTCCACAGGTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SMLPLAPACFRC*LPGCYFHRSSS
Trigger: AGAAGAGGACCTGTGGAAGTAGCAGCCAGGGAGGCAGCAGCGGAAGCAGGCTGGGGCCAGAGGCAGCATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432728.1
CDS CCA 72 bp CAGGATGGTCACCAGCAGGGCGGGCAGGATGCTTGCTaGGTATACCCACCACGGGTTCTTCCCAAAGGGGGC +
Preference number: 6 (lower is better)
Translates to: QDGHQQGGQDAC*VYPPRVLPKGG
Trigger: GCCCCCTTTGGGAAGAACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGCTGGTGACCATCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS GCA 72 bp GCCACCGAAGAACCTGCTCAAGACAGGCCCAGGGGCTaGTTTCTCACCACTAACACCAGTGCAGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: ATEEPAQDRPRG*FLTTNTSAGAG
Trigger: CCCTGCCCCTGCACTGGTGTTAGTGGTGAGAAAGCAGCCCCTGGGCCTGTCTTGAGCAGGTTCTTCGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS CCA 72 bp CGTAATTTGCACTCTGCCGCATCCGCAGGTCTTCCGTaGAGTGGTGTAGACTCGGGCCAGCACCAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RNLHSAASAGLP*SGVDSGQHQGS
Trigger: GGAGCCCTGGTGCTGGCCCGAGTCTACACCACTCCACGGAAGACCTGCGGATGCGGCAGAGTGCAAATTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp GCCGACTGGATGAGGCGCACGAACGCGATGAATGGCTaGTCTAGGAAGTCCACCTCGCCCACGAGCACGTTG +
Preference number: 6 (lower is better)
Translates to: ADWMRRTNAMNG*SRKSTSPTSTL
Trigger: CAACGTGCTCGTGGGCGAGGTGGACTTCCTAGACCAGCCATTCATCGCGTTCGTGCGCCTCATCCAGTCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp ACAGGCACCTCGGTCACTCCTCCCAGCATGGCCGACTaGATGAGGCGCACGAACGCGATGAATGGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: TGTSVTPPSMAD*MRRTNAMNGWS
Trigger: AGACCAGCCATTCATCGCGTTCGTGCGCCTCATCCAGTCGGCCATGCTGGGAGGAGTGACCGAGGTGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp GGAGCTCCGCCGCCTCCTCCCACAGAGCCATTCATCTaGCCCAGCTCTGCTAGGGAGAACACAGATTTCCTC +
Preference number: 6 (lower is better)
Translates to: GAPPPPPTEPFI*PSSARENTDFL
Trigger: GAGGAAATCTGTGTTCTCCCTAGCAGAGCTGGGCCAGATGAATGGCTCTGTGGGAGGAGGCGGCGGAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp GACCGAGTCCTGCTGATAAGATCCATGCTGCTGTCCTaGCTGCTTGCCCCACTCCCTGGGCCAGTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: DRVLLIRSMLLS*LLAPLPGPVSS
Trigger: GGAACTGACTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGATCTTATCAGCAGGACTCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000444570.5
CDS CAA 72 bp AGATCAGGATGGTCACCAGCAGGGCGGGCAGGATGCTaGCTGGGTATACCCACCACGGGTTCTTCCCAAAGG +
Preference number: 6 (lower is better)
Translates to: RSGWSPAGRAGC*LGIPTTGSSQR
Trigger: CCTTTGGGAAGAACCCGTGGTGGGTATACCCAGCAAGCATCCTGCCCGCCCTGCTGGTGACCATCCTGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 72 bp TGGTCCGGCTGGTGCTTGGCTGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAACTGGATGCCATTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: WSGWCLAGIRKS*QRSQNWMPFRE
Trigger: CTCCCTGAATGGCATCCAGTTCTGGGAACGCTGCAAGCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358683.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
ENST00000637036.1
CDS GCA 72 bp AGAGGCTGTGCAGGGATAGTGTGGACACGTGGGGCTTaGTCCAGCGTTCGCCGCCTTCCTCTACCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: RGCAGIVWTRGA*SSVRRLPLPFL
Trigger: AAGAAAAGGTAGAGGAAGGCGGCGAACGCTGGAGCAAGCCCCACGTGTCCACACTATCCCTGCACAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS GCA 72 bp CGGTCAGGCCGCGTTGGCTTGATGACACTGGGCACATaGAGCTTGGGAGTTTCTAGGCCAAAACAGGCATCG +
Preference number: 6 (lower is better)
Translates to: RSGRVGLMTLGT*SLGVSRPKQAS
Trigger: CGATGCCTGTTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCATCAAGCCAACGCGGCCTGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000483195.5
CDS CCA 72 bp CCTCAGGAGGACGTAACTGACCCTCTCCCGGAGCTCTaGCCGCAGGAGACCATCCTCAATCTGCTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: PQEDVTDPLPEL*PQETILNLLLN
Trigger: ATTGAGAAGCAGATTGAGGATGGTCTCCTGCGGCCAGAGCTCCGGGAGAGGGTCAGTTACGTCCTCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS CAA 72 bp GGCTGGTCTAGGAAGTCCACCTCGCCCACGAGCACGTaGGACGCTTCTGAGTCCTTGGGGATCTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: GWSRKSTSPTST*DASESLGIFFM
Trigger: CATGAAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCGAGGTGGACTTCCTAGACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 72 bp TGGTCCGGCTGGTGCTTGGCTGGCATCAGGAAGAGCTaGCAGCGTTCCCAGAATGGAGTCAGCTTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: WSGWCLAGIRKS*QRSQNGVSFFW
Trigger: CCAGAAGAAGCTGACTCCATTCTGGGAACGCTGCAAGCTCTTCCTGATGCCAGCCAAGCACCAGCCGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000377634.8
CDS CAA 72 bp ATCCCAGGGAGGCCAGAACCACTTGCTCTGTTCCTGTaGGGTGGCAAGAAGGGCTCTCTGTGGTTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: IPGRPEPLALFL*GGKKGSLWFPG
Trigger: GCCTGGAAACCACAGAGAGCCCTTCTTGCCACCCAACAGGAACAGAGCAAGTGGTTCTGGCCTCCCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444570.5
CDS CCA 72 bp GCAGGGGCAGGGCTATTTACAAGAACTTGCAGAGTCTaGGGCGAGGAAAGGAACTTGACCAGGGTGGATGGG +
Preference number: 6 (lower is better)
Translates to: AGAGLFTRTCRV*GEERNLTRVDG
Trigger: CCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTTCTTGTAAATAGCCCTGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS CAA 72 bp TGCTTCTGCTCTGGGCATGACACAGACGTCCGTAATTaGCACTCTGCCGCATCCGCAGGTCTTCCGTGGAGT +
Preference number: 6 (lower is better)
Translates to: CFCSGHDTDVRN*HSAASAGLPWS
Trigger: ACTCCACGGAAGACCTGCGGATGCGGCAGAGTGCAAATTACGGACGTCTGTGTCATGCCCAGAGCAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 90 bp CCTCGGTCAGGCCGCGTTGGCTTGATGACACTGGGCACATGCAGCTaGGGAGTTTCTAGGCCAAAACAGGCATCGATTCCACAGAACATC +
Preference number: 6 (lower is better)
Translates to: PRSGRVGLMTLGTCS*GVSRPKQASIPQNI
Trigger: GATGTTCTGTGGAATCGATGCCTGTTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCATCAAGCCAACGCGGCCTGACCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000483195.5
CDS GCA 72 bp CTGGCTGACTCCTTCCACTCCATCTGGTCTCCGTCATaGTGCAGAGTATCCATCTCTGTAAAGAGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LADSFHSIWSPS*CRVSISVKRVG
Trigger: CCCCACCCTCTTTACAGAGATGGATACTCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGAGTCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000444570.5
ENST00000483195.5
CDS GCA 72 bp TGTGGCTGGTCTGGCCGCAGGCCCCAGTGGACTTTTTaGAGGCCTGAAAGATGTCCCTTCTGGTCAGTTTTT +
Preference number: 6 (lower is better)
Translates to: CGWSGRRPQWTF*RPERCPFWSVF
Trigger: AAAAACTGACCAGAAGGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCCAGACCAGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000444570.5
CDS GCA 72 bp AACCAGGATCCAAATCCCAGGGAGGCCAGAACCACTTaGTCTGTTCCTGTTGGGTGGCAAGAAGGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: NQDPNPREARTT*SVPVGWQEGLS
Trigger: AGAGAGCCCTTCTTGCCACCCAACAGGAACAGAGCAAGTGGTTCTGGCCTCCCTGGGATTTGGATCCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444570.5
CDS CCA 72 bp GAAGAGGTCACAGAAACTGGTTACAGTGATGCTTCCTaGGAGGGGAACTTGGAGGTCGGGGCTCAGGGAACT +
Preference number: 6 (lower is better)
Translates to: EEVTETGYSDAS*EGNLEVGAQGT
Trigger: AGTTCCCTGAGCCCCGACCTCCAAGTTCCCCTCCCAGGAAGCATCACTGTAACCAGTTTCTGTGACCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CAA 72 bp GGCCGCGTTGGCTTGATGACACTGGGCACATGCAGCTaGGGAGTTTCTAGGCCAAAACAGGCATCGATTCCA +
Preference number: 6 (lower is better)
Translates to: GRVGLMTLGTCS*GVSRPKQASIP
Trigger: TGGAATCGATGCCTGTTTTGGCCTAGAAACTCCCAAGCTGCATGTGCCCAGTGTCATCAAGCCAACGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000483195.5
CDS TCA 72 bp AAGCGTTGGTGTCTGGTGCCAATGGGGCTGAAGCATTaGACACGGTTGTATTCACTGTGTCAGGGGCGACAC +
Preference number: 6 (lower is better)
Translates to: KRWCLVPMGLKH*TRLYSLCQGRH
Trigger: GTGTCGCCCCTGACACAGTGAATACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCAGACACCAACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS GCA 72 bp GCTGACTCCTTCCACTCCATCTGGTCTCCGTCATGCTaGAGAGTATCCATCTCTGTAAAGAGGGTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: ADSFHSIWSPSC*RVSISVKRVGL
Trigger: CAACCCCACCCTCTTTACAGAGATGGATACTCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGAGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000444570.5
ENST00000483195.5
CDS GCA 72 bp AACACCAGTGCAGGGGCAGGGCTATTTACAAGAACTTaGAGAGTCTGGGGCGAGGAAAGGAACTTGACCAGG +
Preference number: 6 (lower is better)
Translates to: NTSAGAGLFTRT*RVWGEERNLTR
Trigger: CCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTTCTTGTAAATAGCCCTGCCCCTGCACTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS CCA 72 bp AGTCTGGGGCGAGGAAAGGAACTTGACCAGGGTGGATaGGGCAAAGATCTTTCCACCAGAACATTTAGGGCC +
Preference number: 6 (lower is better)
Translates to: SLGRGKELDQGG*GKDLSTRTFRA
Trigger: GGCCCTAAATGTTCTGGTGGAAAGATCTTTGCCCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS CAA 72 bp GAAGCGTTGGTGTCTGGTGCCAATGGGGCTGAAGCATaGAACACGGTTGTATTCACTGTGTCAGGGGCGACA +
Preference number: 6 (lower is better)
Translates to: EALVSGANGAEA*NTVVFTVSGAT
Trigger: TGTCGCCCCTGACACAGTGAATACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCAGACACCAACGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 72 bp CCTGTAGGACTGAGTTTGTGGTTGGCACCACCCACATaGGGAAGGGTGGACATAGAGGGTTTTGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: PVGLSLWLAPPT*GRVDIEGFGEG
Trigger: TCCCTCTCCAAAACCCTCTATGTCCACCCTTCCCAATGTGGGTGGTGCCAACCACAAACTCAGTCCTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS GCA 72 bp AACCTTCCTGTCCAGATAAGTTCCTCCCCGATTTCATaGATGGCTGGCATCTCTCCATCATCCCCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: NLPVQISSSPIS*MAGISPSSPLL
Trigger: AAGCAGCGGGGATGATGGAGAGATGCCAGCCATGCATGAAATCGGGGAGGAACTTATCTGGACAGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp ACACAGATTTCCTCTTGTCAGCAGAGGGCACCTTCTTaGGGGGCTCAATCCGGATATTTGGGTCCCATTCTC +
Preference number: 6 (lower is better)
Translates to: TQISSCQQRAPS*GAQSGYLGPIL
Trigger: GAGAATGGGACCCAAATATCCGGATTGAGCCCCCCAAGAAGGTGCCCTCTGCTGACAAGAGGAAATCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp CTTACACTCCCACCTGGGTGGTCTTCAGGGTACTCCTaGAAACATCCATCAGCTCATGAGCTCACAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LTLPPGWSSGYS*KHPSAHELTAE
Trigger: TTCAGCTGTGAGCTCATGAGCTGATGGATGTTTCCAGGAGTACCCTGAAGACCACCCAGGTGGGAGTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377634.8
ENST00000394019.6
ENST00000436454.1
CDS CCA 72 bp AAACTGGTTACAGTGATGCTTCCTGGGAGGGGAACTTaGAGGTCGGGGCTCAGGGAACTCTATGACTTCTTG +
Preference number: 6 (lower is better)
Translates to: KLVTVMLPGRGT*RSGLRELYDFL
Trigger: CAAGAAGTCATAGAGTTCCCTGAGCCCCGACCTCCAAGTTCCCCTCCCAGGAAGCATCACTGTAACCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CAA 90 bp GCGATGAATGGCTGGTCTAGGAAGTCCACCTCGCCCACGAGCACGTaGGACGCTTCTGAGTCCTTGGGGATCTTCTTCATGAATTTGTTT +
Preference number: 6 (lower is better)
Translates to: AMNGWSRKSTSPTST*DASESLGIFFMNLF
Trigger: AAACAAATTCATGAAGAAGATCCCCAAGGACTCAGAAGCGTCCAACGTGCTCGTGGGCGAGGTGGACTTCCTAGACCAGCCATTCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 90 bp AAGAGCTTGCAGCGTTCCCAGAATGGAGTCAGCTTCTTCTGGATTTaGAATTCTGACCCTCCGGTCCCCATCTGGATGCCATTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: KSLQRSQNGVSFFWI*NSDPPVPIWMPFRE
Trigger: CTCCCTGAATGGCATCCAGATGGGGACCGGAGGGTCAGAATTCAAAATCCAGAAGAAGCTGACTCCATTCTGGGAACGCTGCAAGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000377634.8
CDS TCA 72 bp GTACAGAGAAGCGTTGGTGTCTGGTGCCAATGGGGCTaGAGCATTGAACACGGTTGTATTCACTGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: VQRSVGVWCQWG*SIEHGCIHCVR
Trigger: CCTGACACAGTGAATACAACCGTGTTCAATGCTTCAGCCCCATTGGCACCAGACACCAACGCTTCTCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS GCA 72 bp TCCCGGAGCTCTGGCCGCAGGAGACCATCCTCAATCTaGTTCTCAATGACATCATCTATGATCTGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: SRSSGRRRPSSI*FSMTSSMICGK
Trigger: CTTACCACAGATCATAGATGATGTCATTGAGAAGCAGATTGAGGATGGTCTCCTGCGGCCAGAGCTCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000432728.1
ENST00000483195.5
CDS CCA 72 bp TTATGGCTGTCATCATGCCTGTGTAGAGGGTGCCTATaGGTACAGTATGGTCTCTCCAGGGAAGAGGTCACA +
Preference number: 6 (lower is better)
Translates to: LWLSSCLCRGCL*VQYGLSREEVT
Trigger: TGTGACCTCTTCCCTGGAGAGACCATACTGTACCCATAGGCACCCTCTACACAGGCATGATGACAGCCATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CAA 90 bp CCCAGATTCTTGTCTGCTTTAGCTGTTTCTGAACCATGTCCAGGGTaGAGAAGGGAACATACTGTGATGGTGTCAGCACTCTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: PRFLSALAVSEPCPG*RREHTVMVSALCRK
Trigger: CTTCCTGCAGAGTGCTGACACCATCACAGTATGTTCCCTTCTCAACCCTGGACATGGTTCAGAAACAGCTAAAGCAGACAAGAATCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346834.8
ENST00000423644.5
CDS CAA 90 bp GGGCTATTTACAAGAACTTGCAGAGTCTGGGGCGAGGAAAGGAACTaGACCAGGGTGGATGGGGCAAAGATCTTTCCACCAGAACATTTA +
Preference number: 6 (lower is better)
Translates to: GLFTRTCRVWGEERN*TRVDGAKIFPPEHL
Trigger: TAAATGTTCTGGTGGAAAGATCTTTGCCCCATCCACCCTGGTCAAGTTCCTTTCCTCGCCCCAGACTCTGCAAGTTCTTGTAAATAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479776.1
CDS TCA 72 bp TGGCTGCCCCAGATTCTTGTCTGCTTTAGCTGTTTCTaGACCATGTCCAGGGTTGAGAAGGGAACATACTGT +
Preference number: 6 (lower is better)
Translates to: WLPQILVCFSCF*TMSRVEKGTYC
Trigger: ACAGTATGTTCCCTTCTCAACCCTGGACATGGTTCAGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000436454.1
ENST00000483195.5
CDS GCA 72 bp GGCCACGTCACTGAAGAGATCATCTACCATGAGGGTTaGAATGGCACGGCCAATTTCATTGTAGGATTTTGC +
Preference number: 6 (lower is better)
Translates to: GHVTEEIIYHEG*NGTANFIVGFC
Trigger: GCAAAATCCTACAATGAAATTGGCCGTGCCATTGCAACCCTCATGGTAGATGATCTCTTCAGTGACGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp TTGGCTTCCAGATTGTTTGTGCCAAGCTTTGGCAGGTaGTACAATATTGGCTGCCCCAGATTCTTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: LASRLFVPSFGR*YNIGCPRFLSA
Trigger: AGCAGACAAGAATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000483195.5
CDS CAA 72 bp TACACTCCCACCTGTGGACAAAAACAGAGATGTGGTTaGGGACAGTTACTCACCTCCCTGTGCTTATGTCAC +
Preference number: 6 (lower is better)
Translates to: YTPTCGQKQRCG*GQLLTSLCLCH
Trigger: GTGACATAAGCACAGGGAGGTGAGTAACTGTCCCAAACCACATCTCTGTTTTTGTCCACAGGTGGGAGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CAA 90 bp ACCACTTGCTCTGTTCCACAGTATGTGCAATTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGCAGGTGGTACAATATTGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TTCSVPQYVQFLASR*FVPSFGRWYNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAATTGCACATACTGTGGAACAGAGCAAGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 90 bp CTTGCTCTGTTCCACAGTATGTGCAATTTTTGGCTTCCAGATTGTTaGTGCCAAGCTTTGGCAGGTGGTACAATATTGGCTGCCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LALFHSMCNFWLPDC*CQALAGGTILAAPD
Trigger: ATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAATTGCACATACTGTGGAACAGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CAA 90 bp TCCTTCACCTTCATGACACAGTATGTGCAATTTTTGGCTTCCAGATaGTTTGTGCCAAGCTTTGGCAGGTGGTACAATATTGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: SFTFMTQYVQFLASR*FVPSFGRWYNIGCP
Trigger: GGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAATTGCACATACTGTGTCATGAAGGTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436454.1
CDS CCA 72 bp GATGGACTGAATGTGGAAGCCATCATAGAAGTCACTTaGGAACCAGGGCAACTTCCTCTTGATATCCAGACA +
Preference number: 6 (lower is better)
Translates to: DGLNVEAIIEVT*EPGQLPLDIQT
Trigger: TGTCTGGATATCAAGAGGAAGTTGCCCTGGTTCCCAAGTGACTTCTATGATGGCTTCCACATTCAGTCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000479776.1
ENST00000483195.5
CDS CCA 72 bp CTGGCAATGCAGTGGATACCGTTTTGGGGATCTGATTaGACACTTTCCATGGGAATCTTTATAACCGAGGGA +
Preference number: 6 (lower is better)
Translates to: LAMQWIPFWGSD*TLSMGIFITEG
Trigger: TCCCTCGGTTATAAAGATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000480696.1
ENST00000483195.5
CDS CCA 72 bp AACTCTTTATCTGGAAGGTTATCTTACACTCCCACCTaGGTGGTCTTCAGGGTACTCCTGGAAACATCCATC +
Preference number: 6 (lower is better)
Translates to: NSLSGRLSYTPT*VVFRVLLETSI
Trigger: GATGGATGTTTCCAGGAGTACCCTGAAGACCACCCAGGTGGGAGTGTAAGATAACCTTCCAGATAAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377634.8
ENST00000394019.6
ENST00000436454.1
CDS CCA 72 bp ATCTTACACTCCCACCTGTGGACAAAAACAGAGATGTaGTTTGGGACAGTTACTCACCTCCCTGTGCTTATG +
Preference number: 6 (lower is better)
Translates to: ILHSHLWTKTEM*FGTVTHLPVLM
Trigger: CATAAGCACAGGGAGGTGAGTAACTGTCCCAAACCACATCTCTGTTTTTGTCCACAGGTGGGAGTGTAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CAA 90 bp CACAGTATGTGCAATTTTTGGCTTCCAGATTGTTTGTGCCAAGCTTaGGCAGGTGGTACAATATTGGCTGCCCCAGATTCTTGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: HSMCNFWLPDCLCQA*AGGTILAAPDSCLL
Trigger: AAGCAGACAAGAATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAATTGCACATACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000483195.5
CDS CAA 90 bp AGGTTATCTTACACTCCCACCTGTGGACAAAAACAGAGATGTGGTTaGGGACAGTTACTCACCTCCCTGTGCTTATGTCACAGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: RLSYTPTCGQKQRCG*GQLLTSLCLCHSCS
Trigger: ACTACAACTGTGACATAAGCACAGGGAGGTGAGTAACTGTCCCAAACCACATCTCTGTTTTTGTCCACAGGTGGGAGTGTAAGATAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS GCA 72 bp TTTGTGCCAAGCTTTGGCAGGTGGTACAATATTGGCTaGCCCAGATTCTTGTCTGCTTTAGCTGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: FVPSFGRWYNIG*PRFLSALAVSE
Trigger: TTCAGAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000483195.5
CDS CCA 72 bp ATTGTTTGTGCCAAGCTTTGGCAGGTGGTACAATATTaGCTGCCCCAGATTCTTGTCTGCTTTAGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: IVCAKLWQVVQY*LPQILVCFSCF
Trigger: GAAACAGCTAAAGCAGACAAGAATCTGGGGCAGCCAATATTGTACCACCTGCCAAAGCTTGGCACAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000436454.1
ENST00000483195.5
CDS CCA 72 bp GAACCACTTGCTCTGTTCCACAGTATGTGCAATTTTTaGCTTCCAGATTGTTTGTGCCAAGCTTTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: EPLALFHSMCNF*LPDCLCQALAG
Trigger: ACCTGCCAAAGCTTGGCACAAACAATCTGGAAGCCAAAAATTGCACATACTGTGGAACAGAGCAAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000346834.8
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000483195.5
CDS CCA 72 bp GTCACTGAAGGAAGAATCAGAGTGAGTAACTCCAACTaGAAGATCTTTTTCCTCCTCATCACAGTCCTCGTG +
Preference number: 6 (lower is better)
Translates to: VTEGRIRVSNSN*KIFFLLITVLV
Trigger: CACGAGGACTGTGATGAGGAGGAAAAAGATCTTCCAGTTGGAGTTACTCACTCTGATTCTTCCTTCAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637036.1
CDS CAA 72 bp ACTTGGAGGTCGGGGCTCAGGGAACTCTATGACTTCTaGTACCTTTTATATTGTCCACCATACAGAGGTATT +
Preference number: 6 (lower is better)
Translates to: TWRSGLRELYDF*YLLYCPPYRGI
Trigger: AATACCTCTGTATGGTGGACAATATAAAAGGTACAAGAAGTCATAGAGTTCCCTGAGCCCCGACCTCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483195.5
CDS CCA 72 bp GAAGATCTTTTTCTGGCAATGCAGTGGATACCGTTTTaGGGATCTGATTGGACACTTTCCATGGGAATCTTT +
Preference number: 6 (lower is better)
Translates to: EDLFLAMQWIPF*GSDWTLSMGIF
Trigger: AAAGATTCCCATGGAAAGTGTCCAATCAGATCCCCAAAACGGTATCCACTGCATTGCCAGAAAAAGATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000346834.8
ENST00000358683.8
ENST00000377632.5
ENST00000377634.8
ENST00000394019.6
ENST00000423644.5
ENST00000425249.6
ENST00000480696.1
ENST00000483195.5
CDS CAA 72 bp AGCATTCAGGAAATGCTGGCTGTTATCATCCGAGCATaGTTCACAGTGGCAAAACATTGGAAACAACCTGAA +
Preference number: 6 (lower is better)
Translates to: SIQEMLAVIIRA*FTVAKHWKQPE
Trigger: TTCAGGTTGTTTCCAATGTTTTGCCACTGTGAACAATGCTCGGATGATAACAGCCAGCATTTCCTGAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483195.5