RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC4A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000080493

Ensembl transcript IDs: ENST00000264485.11, ENST00000340595.4, ENST00000351898.10, ENST00000425175.5, ENST00000512686.5, ENST00000514331.1, ENST00000638464.1, ENST00000639096.1, ENST00000649996.1

Found 857 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCCACTCCTCAACCTTGATTGGGAGAAGAGGCAGGGACATTACTaGCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCA +
Preference number: 1 (lower is better)
Translates to: APLLNLDWEKRQGHY*PWHTKQLEFQVFIS
Trigger: TGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR TCA 90 bp AAAACTCATGGCCTTTCAGATAGTGAGGTGCTACAAAATATCACTTaGTTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCATGC +
Preference number: 1 (lower is better)
Translates to: KTHGLSDSEVLQNIT*LYPAIWCHWASCSC
Trigger: GCATGAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGTAGCACCTCACTATCTGAAAGGCCATGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 90 bp CATAAGAGATTCAATGACTTTGCCCTCTGCCTACCATCACTCTTTTaGCTTCTAACATTGCACATATATACACCAGCCATGGCACAGAGC +
Preference number: 1 (lower is better)
Translates to: HKRFNDFALCLPSLF*LLTLHIYTPAMAQS
Trigger: GCTCTGTGCCATGGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATTGAATCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CCA 90 bp CTCCTCAACCTTGATTGGGAGAAGAGGCAGGGACATTACTGCCCCTaGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGT +
Preference number: 1 (lower is better)
Translates to: LLNLDWEKRQGHYCP*HTKQLEFQVFISHS
Trigger: ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCCCAATCAAGGTTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR TCA 90 bp GGGATTCCTCAGATGCTGTTTTTAAGGAACGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGAGAAGCAGAGAGAGCGCTGTATTAT +
Preference number: 1 (lower is better)
Translates to: GIPQMLFLRNGALLS*LCLCKREAERALYY
Trigger: ATAATACAGCGCTCTCTCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAACAGCATCTGAGGAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR GCA 90 bp GACTTTAGCCCTGAGTTGCAATGTTTGCCTAGGAAACAGAATTCTTaGTTTTTATACGTACCCATAGAGCACAATGAAATGAGCCAGGAA +
Preference number: 1 (lower is better)
Translates to: DFSPELQCLPRKQNS*FLYVPIEHNEMSQE
Trigger: TTCCTGGCTCATTTCATTGTGCTCTATGGGTACGTATAAAAAGCAAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CCA 90 bp CTCTTTTCTTCCAACAGTGTTTCTGCAACCACAGCCAGGACTTTCTaGTTAACAACTCTGAGCGTACTTTGTCTTTATCTTTTGAATCCT +
Preference number: 1 (lower is better)
Translates to: LFSSNSVSATTARTF*LTTLSVLCLYLLNP
Trigger: AGGATTCAAAAGATAAAGACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAACACTGTTGGAAGAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTaGATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGAC +
Preference number: 1 (lower is better)
Translates to: NTSIQLIKDLLCMGW*MSIKYTQTELQTAD
Trigger: GTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CCA 90 bp TTAAACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTaGTGCATGAGCATAAAATACACGCAAACTGAATTACAGACAGCA +
Preference number: 1 (lower is better)
Translates to: LNTSIQLIKDLLCMG*CMSIKYTQTELQTA
Trigger: TGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 2 (lower is better)
Translates to: AALFPVLESSISEKGLCLRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
3UTR-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 2 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
3UTR-3UTR CCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTTTTTCCTCCTCTCTTaGAGGTGGAAGGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLFFLLS*RWKAEE
Trigger: CTCCTCAGCCTTCCACCTCCAAGAGAGGAGGAAAAA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: ALFPVLESSISEKGLCLETWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
3UTR-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: ALFPVLESSISEKGLCLEGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTAT +
Preference number: 2 (lower is better)
Translates to: ALFPVLESSISEKGLCLECVSVS*VTEFGY
Trigger: ATAACCAAATTCTGTCACTCAAGACACAGACACGCA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CAA 90 bp GGGGATTCCTCAGATGCTGTTTTTAAGGAACGGTGCACTATTGTCTaGATTGTGTCTATGCAAGAGAGAAGCAGAGAGAGCGCTGTATTA +
Preference number: 2 (lower is better)
Translates to: GDSSDAVFKERCTIV*IVSMQERSRESAVL
Trigger: TAATACAGCGCTCTCTCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAACAGCATCTGAGGAATCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR CAA 90 bp AATGACTTTGCCCTCTGCCTACCATCACTCTTTTGCCTTCTAACATaGCACATATATACACCAGCCATGGCACAGAGCACATACACAAAC +
Preference number: 2 (lower is better)
Translates to: NDFALCLPSLFCLLT*HIYTPAMAQSTYTN
Trigger: GTTTGTGTATGTGCTCTGTGCCATGGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 2 (lower is better)
Translates to: ALFPVLESSISEKGLCLECLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 2 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR GCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTGTTACACTGTACTCTaGAGCTCTGCAATCCCATTA +
Preference number: 2 (lower is better)
Translates to: VSATTARTFWLTTLSVLCCYTVL*SSAIPL
Trigger: TAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCCCGGAAGTCACATCATaGAGAAGGGAGAAGCACTTA +
Preference number: 2 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPPEVTS*RREKHL
Trigger: TAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGG...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 2 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
3UTR-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCTCTGATCTTGCCTTCTaGCTTACCCTAGAGATTGTG +
Preference number: 2 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPSDLAF*LTLEIV
Trigger: CACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAGA...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
3UTR-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGTATTATTTGGCCTGTaGCCAAAAACTGAGACGAAA +
Preference number: 2 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCVLFGL*PKTETK
Trigger: TTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATAC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR TCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGTACTGCATAGGACATTaGCGTGGTAATACAACCAGC +
Preference number: 2 (lower is better)
Translates to: NDELSCFRSSLKGIERGMYCIGH*RGNTTS
Trigger: GCTGGTTGTATTACCACGTCAATGTCCTATGCAGTA...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 2 (lower is better)
Translates to: HESTVTLYSAALQSHYILGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTATCAAGGAAAACAGTaGGTCCAAGATACTTTTCTC +
Preference number: 2 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLYQGKQ*VQDTFL
Trigger: GAGAAAAGTATCTTGGACGCACTGTTTTCCTTGATA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCTACTGCATAGGACATTaGCGTGGTAATACAACCAGC +
Preference number: 2 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSYCIGH*RGNTTS
Trigger: GCTGGTTGTATTACCACGTCAATGTCCTATGCAGTA...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 2 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTTCTGATCTTGCCTTCTaGCTTACCCTAGAGATTGTG +
Preference number: 2 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSSDLAF*LTLEIV
Trigger: CACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAGA...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACTCTGATCTTGCCTTCTaGCTTACCCTAGAGATTGTG +
Preference number: 2 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNSDLAF*LTLEIV
Trigger: CACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAGA...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCAACCACCACCAAATCTaGTTCATTCTTAGTCAATGG +
Preference number: 2 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPNHHQI*FILSQW
Trigger: CCATTGACTAAGAATGAACCAGATTTGGTGGTGGTT...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CAA 90 bp GCTCTAAAAGTTTCACTGGATGACTTTAGCCCTGAGTTGCAATGTTaGCCTAGGAAACAGAATTCTTGCTTTTTATACGTACCCATAGAG +
Preference number: 2 (lower is better)
Translates to: ALKVSLDDFSPELQC*PRKQNSCFLYVPIE
Trigger: CTCTATGGGTACGTATAAAAAGCAAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGTCATCCAGTGAAACTTTTAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
3UTR-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: MSIKYTQTELQTADNCFSNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 2 (lower is better)
Translates to: MSIKYTQTELQTADNCFSRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 2 (lower is better)
Translates to: MSIKYTQTELQTADNCFSGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 2 (lower is better)
Translates to: HESTVTLYSAALQSHYILCLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCCATCGGTTATTCTCATaGCATAGGAGTTTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSHRLFS*HRSLSL
Trigger: AAGAGACAAACTCCTATGTCATGAGAATAACCGATG...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAACCTCTACTCAGAGGCTaGAATGATGAGTTAAGTTGC +
Preference number: 2 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKPLLRG*NDELSC
Trigger: GCAACTTAACTCATCATTTCAGCCTCTGAGTAGAGG...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 2 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSNTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 2 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATGTACTCTGCAGCTCTaGAATCCCATTACATTTTAT +
Preference number: 2 (lower is better)
Translates to: ESFISGSHIMEKGEALIKCTLQL*NPITFY
Trigger: ATAAAATGTAATGGGATTGCAGAGCTGCAGAGTACA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCGTAAACCTCAGGTTTTaGTTGTTAGTTTGGTTAACT +
Preference number: 2 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPVNLRF*LLVWLT
Trigger: AGTTAACCAAACTAACAAGCAAAACCTGAGGTTTAC...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 2 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCTATATACACCAGCCATaGCACAGAGCACATACACAA +
Preference number: 2 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPYIHQP*HRAHTQ
Trigger: TTGTGTATGTGCTCTGTGCCATGGCTGGTGTATATA...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 2 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
3UTR-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTTGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTAT +
Preference number: 2 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVCVSVS*VTEFGY
Trigger: ATAACCAAATTCTGTCACTCAAGACACAGACACGCA...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTGATCACGGGTTAAGCTaGATTTACTATACATGGTTT +
Preference number: 2 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSDHGLS*IYYTWF
Trigger: AAACCATGTATAGTAAATTCAGCTTAACCCGTGATC...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 2 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTTGTTACACTGTACTCTaGAGCTCTGCAATCCCATTA +
Preference number: 2 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVCYTVL*SSAIPL
Trigger: TAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACA...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGCATCTGTACCTAGATaGTACTATTATCAGAACATC +
Preference number: 2 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLASVPR*YYYQNI
Trigger: GATGTTCTGATAATAGTAGCATCTAGGTACAGATGC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTCCAGAATTTGGCAAGTaGGGTTTTAACACAATAACA +
Preference number: 2 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVPEFGK*GFNTIT
Trigger: TGTTATTGTGTTAAAACCTCACTTGCCAAATTCTGG...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 2 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR GCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGTAAACCTCAGGTTTTaGTTGTTAGTTTGGTTAACT +
Preference number: 2 (lower is better)
Translates to: MSIKYTQTELQTADNCFSVNLRF*LLVWLT
Trigger: AGTTAACCAAACTAACAAGCAAAACCTGAGGTTTAC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 3 (lower is better)
Translates to: AALFPVLESSISEKGLCLVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 3 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCAGAGATTCAATGACTTaGCCCTCTGCCTACCATCAC +
Preference number: 3 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLRDSMT*PSAYHH
Trigger: GTGATGGTAGGCAGAGGGCAAAGTCATTGAATCTCT...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR TCA 72 bp AGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTATCAAAGGACACATCTG +
Preference number: 3 (lower is better)
Translates to: RGKGQGLCVSVS*VTEFGYQRTHL
Trigger: CAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCTTTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR TCA 72 bp GGCCTTTCAGATAGTGAGGTGCTACAAAATATCACTTaGTTGTACCCAGCCATTTGGTGCCACTGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: GLSDSEVLQNIT*LYPAIWCHWAS
Trigger: TGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGTAGCACCTCACTATCTGAAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 3 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 3 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAGGCATTTTTGCTCTTTaGATAAGGCAGACACTTGAC +
Preference number: 3 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPGIFAL*IRQTLD
Trigger: GTCAAGTGTCTGCCTTATCAAAAGAGCAAAAATGCC...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 3 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTTTTGCCTTCTAACATaGCACATATATACACCAGCC +
Preference number: 3 (lower is better)
Translates to: VSATTARTFWLTTLSVLCFCLLT*HIYTPA
Trigger: GGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAGTTTTGCTTGTTAGTTaGGTTAACTACTTCTGTTCC +
Preference number: 3 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPVLLVS*VNYFCS
Trigger: GGAACAGAAGTAGTTAACCAAACTAACAAGCAAAAC...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CCA 72 bp CTTGATTGGGAGAAGAGGCAGGGACATTACTGCCCCTaGCACACAAAACAATTAGAATTCCAAGTATTCATT +
Preference number: 3 (lower is better)
Translates to: LDWEKRQGHYCP*HTKQLEFQVFI
Trigger: AATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCCCAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR TCA 72 bp TATGGGTTGGTGCATGAGCATAAAATACACGCAAACTaGATTACAGACAGCAGACAACTGTTTTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: YGLVHEHKIHAN*ITDSRQLFFLL
Trigger: GAGGAGGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCATGCACCAACCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 72 bp AAAAGGTGTTACAAAATCCTTAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGT +
Preference number: 3 (lower is better)
Translates to: KRCYKILNTSIL*LIEAKDRVCAC
Trigger: ACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATTAAGGATTTTGTAACACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
3UTR-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 3 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 3 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 3 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCCGGTGCACTATTGTCTaGATTGTGTCTATGCAAGAG +
Preference number: 3 (lower is better)
Translates to: MSIKYTQTELQTADNCFSRCTIV*IVSMQE
Trigger: CTCTTGCATAGACACAATCAAGACAATAGTGCACCG...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTCCTACCATCACTCTTTaGCCTTCTAACATTGCACAT +
Preference number: 3 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSPTITL*PSNIAH
Trigger: ATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGG...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAATGCTTCAGGAGTTCTTaGAAAGGTATAGAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKCFRSS*KGIERG
Trigger: GCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCA...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTTGCTTCAGGAGTTCTTaGAAAGGTATAGAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVCFRSS*KGIERG
Trigger: GCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCA...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 72 bp TGCATGAGAGTACTGTTACACTGTACTCTGCAGCTCTaGAATCCCATTACATTTTATAGATGTGTAAATGGG +
Preference number: 3 (lower is better)
Translates to: CMRVLLHCTLQL*NPITFYRCVNG
Trigger: CCCATTTACACATCTATAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 72 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATaGTACTATTATCAGAACATCGGTTATTCTCATGAC +
Preference number: 3 (lower is better)
Translates to: IDVVIQPASVPR*YYYQNIGYSHD
Trigger: GTCATGAGAATAACCGATGTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTAACTCTGAGCGTACTTaGTCTTTATCTTTTGAATCC +
Preference number: 3 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSNSERT*SLSFES
Trigger: GGATTCAAAAGATAAAGACAAAGTACGCTCAGAGTT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAATTTTGCCTTCTAACATaGCACATATATACACCAGCC +
Preference number: 3 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKFCLLT*HIYTPA
Trigger: GGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAA...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR-3UTR CAA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAGGTAAACCTCAGGTTTaGCTTGTTAGTTTGGTTAAC +
Preference number: 3 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKGKPQV*LVSLVN
Trigger: GTTAACCAAACTAACAAGCAAAACCTGAGGTTTACC...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR TCA 72 bp GAATTCTTGCTTTTTATACGTACCCATAGAGCACAATaGAATGAGCCAGGAAATTGGACATATCTAAATCTC +
Preference number: 3 (lower is better)
Translates to: EFLLFIRTHRAQ*NEPGNWTYLNL
Trigger: GAGATTTAGATATGTCCAATTTCCTGGCTCATTTCATTGTGCTCTATGGGTACGTATAAAAAGCAAGAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR GCA 72 bp ATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTaGATGAGCATAAAATACACGCAAACTGAATTACAG +
Preference number: 3 (lower is better)
Translates to: IQLIKDLLCMGW*MSIKYTQTELQ
Trigger: CTGTAATTCAGTTTGCGTGTATTTTATGCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCATTTGGCGGCGGAGTGTaGGGCTGCAGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPFGGGV*GCSGHC
Trigger: GCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAA...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGTCGCTCCTCCAGTTTaGCGGCGGAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVVAPPV*RRSVGL
Trigger: CAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGAC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGCATCCTCCTGGGGTCTaGCTTCCGTCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEHPPGV*LPSLLQ
Trigger: CTGGAGGAGCGACGGAAGCCAGACCCCAGGAGGATG...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGTGGCCACATGGGGCTTaGTCCATCTTTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVWPHGA*SIFPHP
Trigger: AGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCA...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGACACCTGCAGGAAAGTaGACAGGTGGACTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVTPAGK*TGGLCA
Trigger: TGCGCAGAGTCCACCTGTTCACTTTCCTGCAGGTGT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCATCATCCAGGAAGCTaGGGTCGTGCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVHHPGS*GRAGRR
Trigger: TCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCTGCAGCAGGAGAGATaGGAGGTTTTAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLLQQER*EVLGCC
Trigger: GCAGCATCCTAAAACCTCTCATCTCTCCTGCTGCAG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGTGTCCTCCTCCTCCGTaGCCTCCATCATGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWCPPPP*PPSWGV
Trigger: TACGCCCCATGATGGAGGTCACGGAGGAGGAGGACA...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGCAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCCCCACTCCTCAACCTTaGTTGGGAGAAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLPTPQP*LGEEAG
Trigger: CCCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGG...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTCCCACTCCTCAACCTTaGTTGGGAGAAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCPTPQP*LGEEAG
Trigger: CCCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGG...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTTGGCTGGACAACCCTaGGGAAAGTGGAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCLAGQP*GKWSSG
Trigger: CCCGGAGCTCCACTTTCCTCAGGGTTGTCCAGCCAA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCTTTGGCGGCGGAGTGTaGGGCTGCAGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFFGGGV*GCSGHC
Trigger: GCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAA...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000351898.10
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGTCGCTCCTCCAGTTTaGCGGCGGAGTGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSVAPPV*RRSVGL
Trigger: CAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGAC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCCTCCCGATCAAGCATaGTGGATCCTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVPPDQA*WILSPY
Trigger: GTATGGAGAAAGGATCCATCATGCTTGATCGGGAGG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATGTCCTCCTCCTCCGTaGCCTCCATCATGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKCPPPP*PPSWGV
Trigger: TACGCCCCATGATGGAGGTCACGGAGGAGGAGGACA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTGGCCACATGGGGCTTaGTCCATCTTTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCWPHGA*SIFPHP
Trigger: AGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTGCCACTGGGCTTCATaGTCATGCTGTGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLECHWAS*SCCEEQ
Trigger: TTGCTCTTCACAGCATGAGCATGAAGCCCAGTGGCA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGTTTGGCGGCGGAGTGTaGGGCTGCAGCGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRFGGGV*GCSGHC
Trigger: GCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAA...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000351898.10
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGACATCCTCCTGGGGTCTaGCTTCCGTCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRHPPGV*LPSLLQ
Trigger: CTGGAGGAGCGACGGAAGCCAGACCCCAGGAGGATG...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCATCCTCCATCCTCCTaGGGTCTGGCTTCCGTCGCT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSHPPSS*GLASVA
Trigger: AGCGACGGAAGCCAGACCCCAGGAGGATGGAGGATG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGAGCTGAGGGGGAGCTaGGCTGTCATCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSELRGS*AVILLS
Trigger: GGAGAGGAGGATGACAGCCCAGCTCCCCCTCAGCTC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCCTATGGGTCATGGCTaGGCTACCATTATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLPMGHG*ATIIRV
Trigger: AACCCTGATAATGGTAGCCCAGCCATGACCCATAGG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACCCCAACAAGCACGTTaGAAGCTTCTGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPPQQAR*KLLHHV
Trigger: CACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCTCCTCAACCTTGATTaGGAGAAGAGGCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLLLNLD*EKRQGH
Trigger: ATGTCCCTGCCTCTTCTCCCAATCAAGGTTGAGGAG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTTTTTCCTCCTCTCTTaGAGGTGGAAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEFFLLS*RWKAEE
Trigger: CTCCTCAGCCTTCCACCTCCAAGAGAGGAGGAAAAA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCGTAATGCCCTCACCTaGGTCAGGTGGCACACAGGT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWRNALT*VRWHTG
Trigger: ACCTGTGTGCCACCTGACCCAGGTGAGGGCATTACG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCTGCAGCAGGAGAGATaGGAGGTTTTAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKLQQER*EVLGCC
Trigger: GCAGCATCCTAAAACCTCTCATCTCTCCTGCTGCAG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLERPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCAGGTGGAAGGACGATaGCTTCATCTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVQVEGR*LHLGTH
Trigger: ATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATGTCCTCCTCCTCCGTaGCCTCCATCATGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKCPPPP*PPSWGV
Trigger: TACGCCCCATGATGGAGGTCACGGAGGAGGAGGACA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATGTCCTCCTCCTCCGTaGCCTCCATCATGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILCPPPP*PPSWGV
Trigger: TACGCCCCATGATGGAGGTCACGGAGGAGGAGGACA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGCTTTGTCCCATCCCTaGACAATGTCAACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEALSHP*TMSTSV
Trigger: TACAGAGGTTGACATTGTTCAGGGATGGGACAAAGC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTCTTCATCACACACATaGTTGAGGAAGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLESSSHT*LRKEAP
Trigger: AGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGAATCGGATGCGTTCTaGAGCAGGAGAGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKESDAF*SRRDER
Trigger: CCTCTCATCTCTCCTGCTGCAGAACGCATCCGATTC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGTTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTGGTTGTTCTCCAGGTaGAGAAGTCTCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLWLFSR*RSLCLH
Trigger: ATGGAGACAGAGACTTCTGCACCTGGAGAACAACCA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTGCCAGACACAACACCTaGAGGAAAGTGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCARHNT*RKVNRW
Trigger: CCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGC...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGCCAGACACAACACCTaGAGGAAAGTGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKARHNT*RKVNRW
Trigger: CCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCCATCCTCCTGGGGTCTaGCTTCCGTCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFHPPGV*LPSLLQ
Trigger: CTGGAGGAGCGACGGAAGCCAGACCCCAGGAGGATG...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000351898.10
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGCATCCTCCATCCTCCTaGGGTCTGGCTTCCGTCGCT +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMHPPSS*GLASVA
Trigger: AGCGACGGAAGCCAGACCCCAGGAGGATGGAGGATG...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAGTTGGCAAATACTCTaGGGCCAGTGTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLESWQIL*GQCGVI
Trigger: AATGACACCACACTGGCCCCAGAGTATTTGCCAACT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTCGGTTTGGACTTGTTaGCTTGAACTCACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLESVWTC*LELTWH
Trigger: GTGCCAAGTGAGTTCAAGCCAACAAGTCCAAACCGA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCATTTTTCCTCCTCTCTTaGAGGTGGAAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPFFLLS*RWKAEE
Trigger: CTCCTCAGCCTTCCACCTCCAAGAGAGGAGGAAAAA...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATTGTACCCAGCCATTTaGTGCCACTGGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTLYPAI*CHWASC
Trigger: GCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCCTCCCGATCAAGCATaGTGGATCCTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKPPDQA*WILSPY
Trigger: GTATGGAGAAAGGATCCATCATGCTTGATCGGGAGG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPRPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAACACCTGCAGGAAAGTaGACAGGTGGACTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKTPAGK*TGGLCA
Trigger: TGCGCAGAGTCCACCTGTTCACTTTCCTGCAGGTGT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCAGCCACCGTTGACTTaGGGATCCAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSQPPLT*GSKAGP
Trigger: TGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGACCCACTCCTCAACCTTaGTTGGGAGAAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRPTPQP*LGEEAG
Trigger: CCCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGG...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGACCCATAGAGCACAATaGAATGAGCCAGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLTHRAQ*NEPGNW
Trigger: CCAATTTCCTGGCTCATTTCATTGTGCTCTATGGGT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAGCCCTCAGATGAGCTaGGGTCTAACCACTCACTTC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWSPQMS*GLTTHF
Trigger: GAAGTGAGTGGTTAGACCTCAGCTCATCTGAGGGCT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAGACGATCCATGAACTaGACACCATTAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLERRSMN*TPLRDA
Trigger: AGCATCCCTTAATGGTGTGCAGTTCATGGATCGTCT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGAGACGATCCATGAACTaGACACCATTAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVRRSMN*TPLRDA
Trigger: AGCATCCCTTAATGGTGTGCAGTTCATGGATCGTCT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTTCCAACAGTGTTTCTaGAACCACAGCCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEFQQCF*NHSQDF
Trigger: AAAGTCCTGGCTGTGGTTGCAGAAACACTGTTGGAA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAGGAAAGTGAACAGGTaGACTCTGCGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTRKVNR*TLRRGT
Trigger: TGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAAGGAAAGTGAACAGGTaGACTCTGCGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKRKVNR*TLRRGT
Trigger: TGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLERRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGACTGTGGTTAAACATTaGCTGGACAACCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLETVVKH*LDNPEE
Trigger: TTCCTCAGGGTTGTCCAGCCAATGTTTAACCACAGT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGCTCATCCAGTTCCGTaGAGAGCTGAGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLAHPVP*RAEGEL
Trigger: CAGCTCCCCCTCAGCTCTTCACGGAACTGGATGAGC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKRPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAACAGGTGGAAGGACGATaGCTTCATCTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKQVEGR*LHLGTH
Trigger: ATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTG...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTGTCCTCCTCCTCCGTaGCCTCCATCATGGGGCGTA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTCPPPP*PPSWGV
Trigger: TACGCCCCATGATGGAGGTCACGGAGGAGGAGGACA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGGTGTCATTAGATATTaGGATATTAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEGVIRY*DISWVR
Trigger: CCTGACCCAGCTAATATCTCAATATCTAATGACACC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGGTGTCATTAGATATTaGGATATTAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLGVIRY*DISWVR
Trigger: CCTGACCCAGCTAATATCTCAATATCTAATGACACC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAACACCTGCAGGAAAGTaGACAGGTGGACTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKTPAGK*TGGLCA
Trigger: TGCGCAGAGTCCACCTGTTCACTTTCCTGCAGGTGT...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAACACCTGCAGGAAAGTaGACAGGTGGACTCTGCGCA +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRTPAGK*TGGLCA
Trigger: TGCGCAGAGTCCACCTGTTCACTTTCCTGCAGGTGT...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCCAGCCACCGTTGACTTaGGGATCCAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFQPPLT*GSKAGP
Trigger: TGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTG...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACATCATCCAGGAAGCTaGGGTCGTGCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKHHPGS*GRAGRR
Trigger: TCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCATCATCCAGGAAGCTaGGGTCGTGCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSHHPGS*GRAGRR
Trigger: TCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGACTTGGAACTTTTTCTaGGTATGGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVTWNFF*VWAVRI
Trigger: GATTCTGACTGCCCATACTCAGAAAAAGTTCCAAGT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGGAATTTTATCAGCATaGTGTGTGGCGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLGILSA*CVAFKE
Trigger: TTCCTTGAACGCCACACATCATGCTGATAAAATTCC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGGCATACCGAGTGACTaGAGGAAAGGAATTTTATCA +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVGIPSD*RKGILS
Trigger: TGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGCTTTGTCCCATCCCTaGACAATGTCAACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTALSHP*TMSTSV
Trigger: TACAGAGGTTGACATTGTTCAGGGATGGGACAAAGC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCAGCCCTCAGATGAGCTaGGGTCTAACCACTCACTTC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSPQMS*GLTTHF
Trigger: GAAGTGAGTGGTTAGACCTCAGCTCATCTGAGGGCT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTTGGCTGGACAACCCTaGGGAAAGTGGAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLLAGQP*GKWSSG
Trigger: CCCGGAGCTCCACTTTCCTCAGGGTTGTCCAGCCAA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGAATCGGATGCGTTCTaGAGCAGGAGAGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSESDAF*SRRDER
Trigger: CCTCTCATCTCTCCTGCTGCAGAACGCATCCGATTC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCTTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTTCCACTCCATCTCCTaGCCATCCACGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLFHSIS*PSTASS
Trigger: GCTGCTGGCCGTGGATGGGCAGGAGATGGAGTGGAA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACCCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGCCAGACACAACACCTaGAGGAAAGTGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKARHNT*RKVNRW
Trigger: CCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCTCTGTCAGAAGGTTTaGTATCGCTTAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVLCQKV*YRLGKV
Trigger: AACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGAATCGGATGCGTTCTaGAGCAGGAGAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKESDAF*SRRDCR
Trigger: TCTGCAGTCTCTCCTGCTGCAGAACGCATCCGATTC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTACATCCTCCATCCTCCTaGGGTCTGGCTTCCGTCGCT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLHPPSS*GLASVA
Trigger: AGCGACGGAAGCCAGACCCCAGGAGGATGGAGGATG...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCCTATGGGTCATGGCTaGGCTACCATTATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWPMGHG*ATIIRV
Trigger: AACCCTGATAATGGTAGCCCAGCCATGACCCATAGG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAACCCCAACAAGCACGTTaGAAGCTTCTGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKPQQAR*KLLHHV
Trigger: CACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGG...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGAGTTGGCAAATACTCTaGGGCCAGTGTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKSWQIL*GQCGVI
Trigger: AATGACACCACACTGGCCCCAGAGTATTTGCCAACT...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCAGTTGGCAAATACTCTaGGGCCAGTGTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLSWQIL*GQCGVI
Trigger: AATGACACCACACTGGCCCCAGAGTATTTGCCAACT...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKVFSKR*NEPTSV
Trigger: AACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAAC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCCGGAAGTCACATCATaGAGAAGGGAGAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKPEVTS*RREKHL
Trigger: TAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGCCATTTGGTGCCACTaGGCTTCATGCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHAIWCH*ASCSCC
Trigger: ACAGCATGAGCATGAAGCCCAGTGGCACCAAATGGC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTCTCCCCAAGGTTACTaGGCTTCCCTTCCACATTTT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKSPQGY*ASLPHF
Trigger: AAAATGTGGAAGGGAAGCCCAGTAACCTTGGGGAGA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCATGGTTAAACATTGGCTaGACAACCCTGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPWLNIG*TTLRKV
Trigger: CACTTTCCTCAGGGTTGTCCAGCCAATGTTTAACCA...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWRPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCAGGTGGAAGGACGATaGCTTCATCTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWQVEGR*LHLGTH
Trigger: ATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCAAAAGAGATCCAAGTaGTACCCTGCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKQKRSK*YPAPFL
Trigger: CAAGAAAGGAGCAGGGTATCACTTGGATCTCTTTTG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCACACAAGGGTTCCAGTaGCTCTTTGTTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSTQGFQ*LFVPSL
Trigger: GAGTGAGGGAACAAAGAGTCACTGGAACCCTTGTGT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCAGCCACCGTTGACTTaGGGATCCAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRQPPLT*GSKAGP
Trigger: TGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCCAGCCACCGTTGACTTaGGGATCCAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPQPPLT*GSKAGP
Trigger: TGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTG...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTACTGCATAGGACATTaGCGTGGTAATACAACCAGC +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLYCIGH*RGNTTS
Trigger: GCTGGTTGTATTACCACGTCAATGTCCTATGCAGTA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTACTGCATAGGACATTaGCGTGGTAATACAACCAGC +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCYCIGH*RGNTTS
Trigger: GCTGGTTGTATTACCACGTCAATGTCCTATGCAGTA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGAATATGTACCAGCCATaGAAATGGCTAAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVNMYQP*KWLKRG
Trigger: GCCTCTTTTTAGCCATTTTCATGGCTGGTACATATT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGAGGTTTTAGGATGCTaGTGCTGGATTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTEVLGC*CWIHQH
Trigger: ATGCTGATGAATCCAGCAGCAGCATCCTAAAACCTC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTATGGCCACATGGGGCTTaGTCCATCTTTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLWPHGA*SIFPHP
Trigger: AGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCA...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTGGCCACATGGGGCTTaGTCCATCTTTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTWPHGA*SIFPHP
Trigger: AGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTGGCCACATGGGGCTTaGTCCATCTTTCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLWPHGA*SIFPHP
Trigger: AGGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGACCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGATGGGGTAGTAATCTaGAAGCTTGATCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEDGVVI*KLDHLL
Trigger: AAGAAGATGATCAAGCTTGCAGATTACTACCCCATC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGATCCAAGTGATACCCTaGTCCTTTCTTGAGTTTATG +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVIQVIP*SFLEFM
Trigger: CATAAACTCAAGAAAGGAGCAGGGTATCACTTGGAT...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTGGTTGTTCTCCAGGTaGAGAAGTCTCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCWLFSR*RSLCLH
Trigger: ATGGAGACAGAGACTTCTGCACCTGGAGAACAACCA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACACACCATTAAGGGATaGTACTCCCATATACAGGAA +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPHTIKG*YSHIQE
Trigger: TTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGAGACGATCCATGAACTaGACACCATTAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKRRSMN*TPLRDA
Trigger: AGCATCCCTTAATGGTGTGCAGTTCATGGATCGTCT...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLENTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGGACTCCGATGTAAATaGTATGGTGGCCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKGLRCK*YGGLLL
Trigger: AAGTAGAAGGCCACCATACCATTTACATCGGAGTCC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTTAGGATGCTGCTGCTaGATTCATCAGCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLLGCCC*IHQHFQ
Trigger: TTGAAAATGCTGATGAATCCAGCAGCAGCATCCTAA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCCTATGGGTCATGGCTaGGCTACCATTATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSPMGHG*ATIIRV
Trigger: AACCCTGATAATGGTAGCCCAGCCATGACCCATAGG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCCCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAAGGAAAGTGAACAGGTaGACTCTGCGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKRKVNR*TLRRGT
Trigger: TGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACAGGAAAGTGAACAGGTaGACTCTGCGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHRKVNR*TLRRGT
Trigger: TGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCT...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGTGCCAAGATCATTACTaGAAAAATGATAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVCQDHY*KNDSSH
Trigger: GTGGCTGCTATCATTTTTCCAGTAATGATCTTGGCA...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAACCACCACCAAATCTaGTTCATTCTTAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLENHHQI*FILSQW
Trigger: CCATTGACTAAGAATGAACCAGATTTGGTGGTGGTT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTACAGCCAGGACTTTCTaGTTAACAACTCTGAGCGTA +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCTARTF*LTTLSV
Trigger: TACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGT...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAGGACATTACTGCCCCTaGCACACAAAACAATTAGAA +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPGHYCP*HTKQLE
Trigger: TTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCC...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACCTCCTCAACCTTGATTaGGAGAAGAGGCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHLLNLD*EKRQGH
Trigger: ATGTCCCTGCCTCTTCTCCCAATCAAGGTTGAGGAG...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTTTTCCTCCTCTCTTaGAGGTGGAAGGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHFFLLS*RWKAEE
Trigger: CTCCTCAGCCTTCCACCTCCAAGAGAGGAGGAAAAA...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGCCATTTGGTGCCACTaGGCTTCATGCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSAIWCH*ASCSCC
Trigger: ACAGCATGAGCATGAAGCCCAGTGGCACCAAATGGC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGTCTCCCCAAGGTTACTaGGCTTCCCTTCCACATTTT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWSPQGY*ASLPHF
Trigger: AAAATGTGGAAGGGAAGCCCAGTAACCTTGGGGAGA...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAACTGCAGCAGGAGAGATaGGAGGTTTTAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKLQQER*EVLGCC
Trigger: GCAGCATCCTAAAACCTCTCATCTCTCCTGCTGCAG...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAACTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSRPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAATTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCTTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCCAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAACAGTGGCTACCAAAATaGGACATAGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKQWLPK*DIGRRT
Trigger: GGTCCGCCTTCCTATGTCTCATTTTGGTAGCCACTG...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCGGTGTCATTAGATATTaGGATATTAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLGVIRY*DISWVR
Trigger: CCTGACCCAGCTAATATCTCAATATCTAATGACACC...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGTTTCCTCCGTATTTTaGACACTCCTTCTTCGACAA +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKVSSVF*TLLLRQ
Trigger: TTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAAC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGTTTCCTCCGTATTTTaGACACTCCTTCTTCGACAA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKVSSVF*TLLLRQ
Trigger: TTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAAC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAACACAAGGGTTCCAGTaGCTCTTTGTTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILTQGFQ*LFVPSL
Trigger: GAGTGAGGGAACAAAGAGTCACTGGAACCCTTGTGT...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACAGCCACCGTTGACTTaGGGATCCAAAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTQPPLT*GSKAGP
Trigger: TGGCCCTGCTTTGGATCCTCAAGTCAACGGTGGCTG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTACATCATCCAGGAAGCTaGGGTCGTGCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLHHPGS*GRAGRR
Trigger: TCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATG...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAACTTGGAACTTTTTCTaGGTATGGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTTWNFF*VWAVRI
Trigger: GATTCTGACTGCCCATACTCAGAAAAAGTTCCAAGT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGAATTTTATCAGCATaGTGTGTGGCGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGILSA*CVAFKE
Trigger: TTCCTTGAACGCCACACATCATGCTGATAAAATTCC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGGAATTTTATCAGCATaGTGTGTGGCGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKGILSA*CVAFKE
Trigger: TTCCTTGAACGCCACACATCATGCTGATAAAATTCC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGCATACCGAGTGACTaGAGGAAAGGAATTTTATCA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGIPSD*RKGILS
Trigger: TGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGGCATACCGAGTGACTaGAGGAAAGGAATTTTATCA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKGIPSD*RKGILS
Trigger: TGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKCVSVS*VTEFGY
Trigger: ATAACCAAATTCTGTCACTCAAGACACAGACACGCA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKCVSVS*VTEFGY
Trigger: ATAACCAAATTCTGTCACTCAAGACACAGACACGCA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACATCGGTTATTCTCATaGCATAGGAGTTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPHRLFS*HRSLSL
Trigger: AAGAGACAAACTCCTATGTCATGAGAATAACCGATG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGCCAGAATTTGGCAAGTaGGGTTTTAACACAATAACA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEPEFGK*GFNTIT
Trigger: TGTTATTGTGTTAAAACCTCACTTGCCAAATTCTGG...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGATCACGGGTTAAGCTaGATTTACTATACATGGTTT +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLDHGLS*IYYTWF
Trigger: AAACCATGTATAGTAAATTCAGCTTAACCCGTGATC...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGCTTTGTCCCATCCCTaGACAATGTCAACCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSALSHP*TMSTSV
Trigger: TACAGAGGTTGACATTGTTCAGGGATGGGACAAAGC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCACTACAAAATATCACTTaGTTGTACCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPLQNIT*LYPAIW
Trigger: CCAAATGGCTGGGTACAATCAAGTGATATTTTGTAG...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACACTCCAATTCTGTGTaGTGTGTCACAAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTHSNSV*CVTKNL
Trigger: AAGGTTCTTTGTGACACATCACACAGAATTGGAGTG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTCTTCATCACACACATaGTTGAGGAAGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSSSHT*LRKEAP
Trigger: AGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATCTTCATCACACACATaGTTGAGGAAGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSSSHT*LRKEAP
Trigger: AGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGAATCGGATGCGTTCTaGAGCAGGAGAGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFESDAF*SRRDER
Trigger: CCTCTCATCTCTCCTGCTGCAGAACGCATCCGATTC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTCCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGGGTGGCAATGGCTCTaGCAATCTCGTGGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRGWQWL*QSRGRT
Trigger: AGTCCTACCACGAGATTGGCAGAGCCATTGCCACCC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACGCCAGACACAACACCTaGAGGAAAGTGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNARHNT*RKVNRW
Trigger: CCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGC...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACTCTGTCAGAAGGTTTaGTATCGCTTAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTLCQKV*YRLGKV
Trigger: AACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATGTTACACTGTACTCTaGAGCTCTGCAATCCCATTA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTCYTVL*SSAIPL
Trigger: TAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGTGCAGCAGGAGAGACTaGAGAAGTGAAAATACTGTG +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWCSRRD*RSENTV
Trigger: CACAGTATTTTCACTTCTGCAGTCTCTCCTGCTGCA...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCATTAGCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSISWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGCTAAT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAAGTTGGCAAATACTCTaGGGCCAGTGTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSWQIL*GQCGVI
Trigger: AATGACACCACACTGGCCCCAGAGTATTTGCCAACT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCGAACCAACCTCGGTTTaGACTTGTTGGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPEPTSV*TCWLEL
Trigger: GAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTC...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGGAAAGTGAACAGGTaGACTCTGCGCAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSRKVNR*TLRRGT
Trigger: TGTTCCTCTGCGCAGAGTCCACCTGTTCACTTTCCT...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTTTCTTGTCCTTTTCTaGAATGACATCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLEFLVLF*NDIIQE
Trigger: TTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTATCAGCATGATGTGTaGCGTTCAAGGAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCYQHDV*RSRNVG
Trigger: ACCAACATTCCTTGAACGCCACACATCATGCTGATA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATATCAGCATGATGTGTaGCGTTCAAGGAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKYQHDV*RSRNVG
Trigger: ACCAACATTCCTTGAACGCCACACATCATGCTGATA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATATCAGCATGATGTGTaGCGTTCAAGGAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTYQHDV*RSRNVG
Trigger: ACCAACATTCCTTGAACGCCACACATCATGCTGATA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTCTGATCTTGCCTTCTaGCTTACCCTAGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCSDLAF*LTLEIV
Trigger: CACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAGA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGGACATTACTGCCCCTaGCACACAAAACAATTAGAA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKGHYCP*HTKQLE
Trigger: TTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACTCCTCAACCTTGATTaGGAGAAGAGGCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKLLNLD*EKRQGH
Trigger: ATGTCCCTGCCTCTTCTCCCAATCAAGGTTGAGGAG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCACAACTTGACTGGTTaGCGTATTACACAACTTTTT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVHNLTG*RITQLF
Trigger: AAAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGACTGTGGTTAAACATTaGCTGGACAACCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWTVVKH*LDNPEE
Trigger: TTCCTCAGGGTTGTCCAGCCAATGTTTAACCACAGT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCTGCAGCAGGAGAGATaGGAGGTTTTAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRLQQER*EVLGCC
Trigger: GCAGCATCCTAAAACCTCTCATCTCTCCTGCTGCAG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAACCTCCTCTCCCAAGATaGATCGGATGCGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKPPLPR*IGCVLQ
Trigger: CTGCAGAACGCATCCGATTCATCTTGGGAGAGGAGG...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTCCTCCCGATCAAGCATaGTGGATCCTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSPPDQA*WILSPY
Trigger: GTATGGAGAAAGGATCCATCATGCTTGATCGGGAGG...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACAGGTGGAAGGACGATaGCTTCATCTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKQVEGR*LHLGTH
Trigger: ATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCAAAAGAGATCCAAGTaGTACCCTGCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSQKRSK*YPAPFL
Trigger: CAAGAAAGGAGCAGGGTATCACTTGGATCTCTTTTG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACACACAAGGGTTCCAGTaGCTCTTTGTTCCCTCACTC +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNTQGFQ*LFVPSL
Trigger: GAGTGAGGGAACAAAGAGTCACTGGAACCCTTGTGT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATCATCATCCAGGAAGCTaGGGTCGTGCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNHHPGS*GRAGRR
Trigger: TCTTCTCCCAGCACGACCTCAGCTTCCTGGATGATG...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGTATTATTTGGCCTGTaGCCAAAAACTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKVLFGL*PKTETK
Trigger: TTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATAC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGTATTATTTGGCCTGTaGCCAAAAACTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTVLFGL*PKTETK
Trigger: TTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATAC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCATCGGTTATTCTCATaGCATAGGAGTTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKHRLFS*HRSLSL
Trigger: AAGAGACAAACTCCTATGTCATGAGAATAACCGATG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATTGGAGGTGGAAGGCTaGGGAGAGAGGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKLEVEG*GERFLF
Trigger: AAACAAAAACCTCTCTCCTCAGCCTTCCACCTCCAA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAGGCCAAAACACAACTTaGCTGGTTGGCGTATTACAC +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKGQNTT*LVGVLH
Trigger: GTGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCC...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGGCCAAAACACAACTTaGCTGGTTGGCGTATTACAC +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMGQNTT*LVGVLH
Trigger: GTGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAACCCATAGAGCACAATaGAATGAGCCAGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKTHRAQ*NEPGNW
Trigger: CCAATTTCCTGGCTCATTTCATTGTGCTCTATGGGT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAATATGTACCAGCCATaGAAATGGCTAAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTNMYQP*KWLKRG
Trigger: GCCTCTTTTTAGCCATTTTCATGGCTGGTACATATT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCACTCCAATTCTGTGTaGTGTGTCACAAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWHSNSV*CVTKNL
Trigger: AAGGTTCTTTGTGACACATCACACAGAATTGGAGTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGAGGTTTTAGGATGCTaGTGCTGGATTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKEVLGC*CWIHQH
Trigger: ATGCTGATGAATCCAGCAGCAGCATCCTAAAACCTC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGAATCGGATGCGTTCTaGAGCAGGAGAGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSESDAF*SRRDER
Trigger: CCTCTCATCTCTCCTGCTGCAGAACGCATCCGATTC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR GCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCCCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRPSMTA*CSLTKA
Trigger: TGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGATGGGGTAGTAATCTaGAAGCTTGATCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKDGVVI*KLDHLL
Trigger: AAGAAGATGATCAAGCTTGCAGATTACTACCCCATC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAATCCAAGTGATACCCTaGTCCTTTCTTGAGTTTATG +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKIQVIP*SFLEFM
Trigger: CATAAACTCAAGAAAGGAGCAGGGTATCACTTGGAT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTGGTTGTTCTCCAGGTaGAGAAGTCTCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSWLFSR*RSLCLH
Trigger: ATGGAGACAGAGACTTCTGCACCTGGAGAACAACCA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATGGTTGTTCTCCAGGTaGAGAAGTCTCTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKWLFSR*RSLCLH
Trigger: ATGGAGACAGAGACTTCTGCACCTGGAGAACAACCA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGCCAGACACAACACCTaGAGGAAAGTGAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTARHNT*RKVNRW
Trigger: CCACCTGTTCACTTTCCTGCAGGTGTTGTGTCTGGC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATCTGACAGCTACAAGTaGCAAGATCATTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKSDSYK*QDHYWK
Trigger: TTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTCTGACAGCTACAAGTaGCAAGATCATTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKSDSYK*QDHYWK
Trigger: TTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLNTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCNTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTNTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGTAAACCTCAGGTTTTaGTTGTTAGTTTGGTTAACT +
Preference number: 4 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVVNLRF*LLVWLT
Trigger: AGTTAACCAAACTAACAAGCAAAACCTGAGGTTTAC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAATTTGTGTCCAGTTTaGATAGAAACAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: ALFPVLESSISEKGLCLENLCPV*IETKPP
Trigger: TGGTGGTTTTGTTTCTATGCAAACTGGACACAAATT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGAATTTGTGTCCAGTTTaGATAGAAACAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: AALFPVLESSISEKGLCLNLCPV*IETKPP
Trigger: TGGTGGTTTTGTTTCTATGCAAACTGGACACAAATT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTCCAACAGTGTTTCTaGAACCACAGCCAGGACTTT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHFQQCF*NHSQDF
Trigger: AAAGTCCTGGCTGTGGTTGCAGAAACACTGTTGGAA...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAATGCCACTGGGCTTCATaGTCATGCTGTGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKCHWAS*SCCEEQ
Trigger: TTGCTCTTCACAGCATGAGCATGAAGCCCAGTGGCA...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCACTTTAGCCCTGAGTTaGAATGTTTGCCTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCTLALS*NVCLGN
Trigger: GTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGAATCGGATGCGTTCTaGAGCAGGAGAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLESDAF*SRRDCR
Trigger: TCTGCAGTCTCTCCTGCTGCAGAACGCATCCGATTC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAGCATGTTGAAAATTTaGAAGCATGGAGCCTACACC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWSMLKI*KHGAYT
Trigger: GGTGTAGGCTCCATGCTTGCAAATTTTCAACATGCT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAAACTTATTCTTCAGCTaGTCCTTCTCCGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKNLFFS*SFSGLS
Trigger: TGATAAACCGGAGAAGGACCAGCTGAAGAATAAGTT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCCCCAACAAGCACGTTaGAAGCTTCTGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLPQQAR*KLLHHV
Trigger: CACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTCCCCAACAAGCACGTTaGAAGCTTCTGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTPQQAR*KLLHHV
Trigger: CACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGG...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAACTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACCTGCATGTTGTCAGTaGCATCCCCAAGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTPACCQ*HPQAVL
Trigger: GAGGACTGCTTGGGGATGCCACTGACAACATGCAGG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATCGGTTTGGACTTGTTaGCTTGAACTCACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKSVWTC*LELTWH
Trigger: GTGCCAAGTGAGTTCAAGCCAACAAGTCCAAACCGA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGAACCAACCTCGGTTTaGACTTGTTGGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMEPTSV*TCWLEL
Trigger: GAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGAACCAACCTCGGTTTaGACTTGTTGGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSREPTSV*TCWLEL
Trigger: GAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRVFSKR*NEPTSV
Trigger: AACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAAC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATGCCAAGATCATTACTaGAAAAATGATAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTCQDHY*KNDSSH
Trigger: GTGGCTGCTATCATTTTTCCAGTAATGATCTTGGCA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGCCGGAAGTCACATCATaGAGAAGGGAGAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMPEVTS*RREKHL
Trigger: TAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGG...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGCCATTTGGTGCCACTaGGCTTCATGCTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTAIWCH*ASCSCC
Trigger: ACAGCATGAGCATGAAGCCCAGTGGCACCAAATGGC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTCACCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLLTWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAACTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCCTCCCGATCAAGCATaGTGGATCCTTTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLPPDQA*WILSPY
Trigger: GTATGGAGAAAGGATCCATCATGCTTGATCGGGAGG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAATTGGATTTCTTGGTTTaGTGCCGGTGCTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKLDFLV*CRCFRS
Trigger: GCTCCGGAAGCACCGGCATCAAACCAAGAAATCCAA...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCCAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGGTGTCATTAGATATTaGGATATTAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSGVIRY*DISWVR
Trigger: CCTGACCCAGCTAATATCTCAATATCTAATGACACC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGTTTCCTCCGTATTTTaGACACTCCTTCTTCGACAA +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSVSSVF*TLLLRQ
Trigger: TTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAAC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGGCATACCGAGTGACTaGAGGAAAGGAATTTTATCA +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHGIPSD*RKGILS
Trigger: TGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKCLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATGCGTGTCTGTGTCTTaGGTGACAGAATTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKCVSVS*VTEFGY
Trigger: ATAACCAAATTCTGTCACTCAAGACACAGACACGCA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGGAGAGCTCTATAAGTaGGAAGGGACTCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTGELYK*EGTLSG
Trigger: TCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGCCTCTACTCAGAGGCTaGAATGATGAGTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMPLLRG*NDELSC
Trigger: GCAACTTAACTCATCATTTCAGCCTCTGAGTAGAGG...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAATTGGAGGTGGAAGGCTaGGGAGAGAGGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKLEVEG*GERFLF
Trigger: AAACAAAAACCTCTCTCCTCAGCCTTCCACCTCCAA...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCAATTTCAGGCTGCAATaGAGCTCAATGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLNFRLQ*SSMKSS
Trigger: AGATGATTTCATTGAGCTTCATTGCAGCCTGAAATT...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGGTAAACATCCTACTTaGACTGGAGACTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKGKHPT*TGDCLP
Trigger: GGGAAGACAGTCTCCAGTGCAAGTAGGATGTTTACC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGATGGGGTAGTAATCTaGAAGCTTGATCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWDGVVI*KLDHLL
Trigger: AAGAAGATGATCAAGCTTGCAGATTACTACCCCATC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGCTTCTTCGACAAAAATaGCCAGTCAAAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKLLRQK*PVKGSI
Trigger: AATACTACCTTTGACTGGGCATTTTTGTCGAAGAAG...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACTTCTTCGACAAAAATaGCCAGTCAAAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTLLRQK*PVKGSI
Trigger: AATACTACCTTTGACTGGGCATTTTTGTCGAAGAAG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAAGACGATCCATGAACTaGACACCATTAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILRRSMN*TPLRDA
Trigger: AGCATCCCTTAATGGTGTGCAGTTCATGGATCGTCT...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSLRKG*CSMMSI
Trigger: AATGGACATCATGGAACAGCAACCTTTCCTAAGCGA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCTCTGTCAGAAGGTTTaGTATCGCTTAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSLCQKV*YRLGKV
Trigger: AACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATGTACTCTGCAGCTCTaGAATCCCATTACATTTTAT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTCTLQL*NPITFY
Trigger: ATAAAATGTAATGGGATTGCAGAGCTGCAGAGTACA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGTGCCACTGGGCTTCATaGTCATGCTGTGAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRCHWAS*SCCEEQ
Trigger: TTGCTCTTCACAGCATGAGCATGAAGCCCAGTGGCA...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAACTTTAGCCCTGAGTTaGAATGTTTGCCTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKTLALS*NVCLGN
Trigger: GTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGACTCCGATGTAAATaGTATGGTGGCCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGLRCK*YGGLLL
Trigger: AAGTAGAAGGCCACCATACCATTTACATCGGAGTCC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTCCTATGGGTCATGGCTaGGCTACCATTATCAGGGTT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTPMGHG*ATIIRV
Trigger: AACCCTGATAATGGTAGCCCAGCCATGACCCATAGG...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLEVRFL*VMAGLP
Trigger: TGGTAGCCCAGCCATGACCCATAGGAATCTGACTTC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTCCCCAACAAGCACGTTaGAAGCTTCTGCATCACGTG +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVPQQAR*KLLHHV
Trigger: CACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGG...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCCTCTATCCTAATTGCTaGATCCCATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPLYPNC*IPFPRW
Trigger: CCACCTGGGGAATGGGATCCAGCAATTAGGATAGAG...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAATTAGCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKISWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGCTAAT...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGAACCAACCTCGGTTTaGACTTGTTGGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFEPTSV*TCWLEL
Trigger: GAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKVFSKR*NEPTSV
Trigger: AACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAAC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFVFSKR*NEPTSV
Trigger: AACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAAC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTGCCAAGATCATTACTaGAAAAATGATAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCCQDHY*KNDSSH
Trigger: GTGGCTGCTATCATTTTTCCAGTAATGATCTTGGCA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATTTCTTGTCCTTTTCTaGAATGACATCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTFLVLF*NDIIQE
Trigger: TTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAACCGGAAGTCACATCATaGAGAAGGGAGAAGCACTTA +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKPEVTS*RREKHL
Trigger: TAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGG...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATTGTACCCAGCCATTTaGTGCCACTGGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTLYPAI*CHWASC
Trigger: GCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTTTGTACCCAGCCATTTaGTGCCACTGGGCTTCATGC +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVLYPAI*CHWASC
Trigger: GCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAA...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCC +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTRPVSI*WSTIIS
Trigger: GGAGATGATTGTTGACCATCAGATTGAGACAGGCCT...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCAGGTGGAAGGACGATaGCTTCATCTAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRQVEGR*LHLGTH
Trigger: ATGAGTTCCTAGATGAAGTCATCGTCCTTCCACCTG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGTGTCATTAGATATTaGGATATTAGCTGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGVIRY*DISWVR
Trigger: CCTGACCCAGCTAATATCTCAATATCTAATGACACC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAGGAATTTTATCAGCATaGTGTGTGGCGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILGILSA*CVAFKE
Trigger: TTCCTTGAACGCCACACATCATGCTGATAAAATTCC...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCCLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCCCTCTACTCAGAGGCTaGAATGATGAGTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSPLLRG*NDELSC
Trigger: GCAACTTAACTCATCATTTCAGCCTCTGAGTAGAGG...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCTTGGAGGTGGAAGGCTaGGGAGAGAGGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSLEVEG*GERFLF
Trigger: AAACAAAAACCTCTCTCCTCAGCCTTCCACCTCCAA...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAAAATACACGCAAACTaGATTACAGACAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCKIHAN*ITDSRQ
Trigger: TTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCACCCATAGAGCACAATaGAATGAGCCAGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSTHRAQ*NEPGNW
Trigger: CCAATTTCCTGGCTCATTTCATTGTGCTCTATGGGT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAGAATAATGTACACATaGATTCCTTGCAAATCCCAC +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWRIMYT*IPCKSH
Trigger: GTGGGATTTGCAAGGAATTCATGTGTACATTATTCT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTCTTCATCACACACATaGTTGAGGAAGGAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSSSHT*LRKEAP
Trigger: AGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGATGGGGTAGTAATCTaGAAGCTTGATCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHDGVVI*KLDHLL
Trigger: AAGAAGATGATCAAGCTTGCAGATTACTACCCCATC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTACACACCATTAAGGGATaGTACTCCCATATACAGGAA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILHTIKG*YSHIQE
Trigger: TTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTG...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSSLRKG*CSMMSI
Trigger: AATGGACATCATGGAACAGCAACCTTTCCTAAGCGA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCTCTGTCAGAAGGTTTaGTATCGCTTAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSLCQKV*YRLGKV
Trigger: AACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGGACATTCCAGCACTTaGTACAATGATGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFGHSST*YNDGNG
Trigger: ACCATTGCCATCATTGTAGCAAGTGCTGGAATGTCC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000649996.1
CDS-3UTR GCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATGACTTTGCCCTCTaGCTACCATCACTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKNDFAL*LPSLFC
Trigger: GCAAAAGAGTGATGGTAGGCAGAGGGCAAAGTCATT...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATGTTACACTGTACTCTaGAGCTCTGCAATCCCATTA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILCYTVL*SSAIPL
Trigger: TAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGTAAACCTCAGGTTTTaGTTGTTAGTTTGGTTAACT +
Preference number: 4 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTVNLRF*LLVWLT
Trigger: AGTTAACCAAACTAACAAGCAAAACCTGAGGTTTAC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTACTCTGTATGGGTTGGTaGATGAGCATAAAATACACG +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILLCMGW*MSIKYT
Trigger: CGTGTATTTTATGCTCATGCACCAACCCATACAGAG...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCTCTGTATGGGTTGGTaGATGAGCATAAAATACACG +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSLCMGW*MSIKYT
Trigger: CGTGTATTTTATGCTCATGCACCAACCCATACAGAG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCCTGAGTTGCAATGTTTaGCTAGGAAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCLSCNV*LGNRIL
Trigger: AAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAG...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACTGCAGCAGGAGAGACTaGAGAAGTGAAAATACTGTG +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNCSRRD*RSENTV
Trigger: CACAGTATTTTCACTTCTGCAGTCTCTCCTGCTGCA...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCGGACTCCGATGTAAATaGTATGGTGGCCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSGLRCK*YGGLLL
Trigger: AAGTAGAAGGCCACCATACCATTTACATCGGAGTCC...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR CCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGAAGGTTGGATTTCTTaGTTTGATGCCGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLEGWIS*FDAGAS
Trigger: GGAAGCACCGGCATCAAACCAAGAAATCCAACCTTC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAAACATCCTACTTGCACTaGAGACTGTCTTCCCAATGT +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKTSYLH*RLSSQC
Trigger: ACATTGGGAAGACAGTCTCCAGTGCAAGTAGGATGT...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAATCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCATTAGCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPISWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGCTAAT...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTAGTTGGCAAATACTCTaGGGCCAGTGTGGTGTCATT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSWQIL*GQCGVI
Trigger: AATGACACCACACTGGCCCCAGAGTATTTGCCAACT...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTCAAAGGTAGTATTATaGTACATGTCAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKSKVVL*YMSVED
Trigger: GTCTTCTACTGACATGTACCATAATACTACCTTTGA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTCAAAGGTAGTATTATaGTACATGTCAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCSKVVL*YMSVED
Trigger: GTCTTCTACTGACATGTACCATAATACTACCTTTGA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCTCGGTTTGGACTTGTTaGCTTGAACTCACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSSVWTC*LELTWH
Trigger: GTGCCAAGTGAGTTCAAGCCAACAAGTCCAAACCGA...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTCGGTTTGGACTTGTTaGCTTGAACTCACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSVWTC*LELTWH
Trigger: GTGCCAAGTGAGTTCAAGCCAACAAGTCCAAACCGA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGAACCAACCTCGGTTTaGACTTGTTGGCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLEPTSV*TCWLEL
Trigger: GAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRVFSKR*NEPTSV
Trigger: AACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAAC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGTATCAGCATGATGTGTaGCGTTCAAGGAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMYQHDV*RSRNVG
Trigger: ACCAACATTCCTTGAACGCCACACATCATGCTGATA...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTATCAGCATGATGTGTaGCGTTCAAGGAATGTTGGT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSYQHDV*RSRNVG
Trigger: ACCAACATTCCTTGAACGCCACACATCATGCTGATA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAAAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATATATACACCAGCCATaGCACAGAGCACATACACAA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILYIHQP*HRAHTQ
Trigger: TTGTGTATGTGCTCTGTGCCATGGCTGGTGTATATA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCACAGCCAGGACTTTCTaGTTAACAACTCTGAGCGTA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFTARTF*LTTLSV
Trigger: TACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCACAGCCAGGACTTTCTaGTTAACAACTCTGAGCGTA +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSTARTF*LTTLSV
Trigger: TACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGGACATTACTGCCCCTaGCACACAAAACAATTAGAA +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMGHYCP*HTKQLE
Trigger: TTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTTACTCTGTATGGGTTaGTGCATGAGCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCLLCMG*CMSIKY
Trigger: GTATTTTATGCTCATGCACCAACCCATACAGAGTAA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTACATATCTAAATCTCTaGCCAAAACACAACTTGACT +
Preference number: 4 (lower is better)
Translates to: VSATTARTFWLTTLSVLCTYLNL*PKHNLT
Trigger: AGTCAAGTTGTGTTTTGGCCAGAGATTTAGATATGT...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTCTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCCAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGTATTATTTGGCCTGTaGCCAAAAACTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMVLFGL*PKTETK
Trigger: TTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATAC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSCLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGCATCGGTTATTCTCATaGCATAGGAGTTTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NDELSCFRSSLKGIERGMHRLFS*HRSLSL
Trigger: AAGAGACAAACTCCTATGTCATGAGAATAACCGATG...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGATCACGGGTTAAGCTaGATTTACTATACATGGTTT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHDHGLS*IYYTWF
Trigger: AAACCATGTATAGTAAATTCAGCTTAACCCGTGATC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAACTACAAAATATCACTTaGTTGTACCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKLQNIT*LYPAIW
Trigger: CCAAATGGCTGGGTACAATCAAGTGATATTTTGTAG...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACAATTTCAGGCTGCAATaGAGCTCAATGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHNFRLQ*SSMKSS
Trigger: AGATGATTTCATTGAGCTTCATTGCAGCCTGAAATT...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTGGCCAAAACACAACTTaGCTGGTTGGCGTATTACAC +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVGQNTT*LVGVLH
Trigger: GTGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCC...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGAGGTTTTAGGATGCTaGTGCTGGATTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTEVLGC*CWIHQH
Trigger: ATGCTGATGAATCCAGCAGCAGCATCCTAAAACCTC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAAACCGTCCAGTTCGCTaGAATTCTTCACAATCCCCA +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKNRPVR*NSSQSP
Trigger: TGGGGATTGTGAAGAATTGCAGCGAACTGGACGGTT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAAGACGATCCATGAACTaGACACCATTAAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLRRSMN*TPLRDA
Trigger: AGCATCCCTTAATGGTGTGCAGTTCATGGATCGTCT...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATCTGACAGCTACAAGTaGCAAGATCATTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKSDSYK*QDHYWK
Trigger: TTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCTCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFSLRKG*CSMMSI
Trigger: AATGGACATCATGGAACAGCAACCTTTCCTAAGCGA...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGCATCTGTACCTAGATaGTACTATTATCAGAACATC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSASVPR*YYYQNI
Trigger: GATGTTCTGATAATAGTAGCATCTAGGTACAGATGC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATGTACTCTGCAGCTCTaGAATCCCATTACATTTTAT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKCTLQL*NPITFY
Trigger: ATAAAATGTAATGGGATTGCAGAGCTGCAGAGTACA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTATCAAGGAAAACAGTaGGTCCAAGATACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSYQGKQ*VQDTFL
Trigger: GAGAAAAGTATCTTGGACGCACTGTTTTCCTTGATA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCTATCAAGGAAAACAGTaGGTCCAAGATACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPYQGKQ*VQDTFL
Trigger: GAGAAAAGTATCTTGGACGCACTGTTTTCCTTGATA...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTACTTTAGCCCTGAGTTaGAATGTTTGCCTAGGAAAC +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSTLALS*NVCLGN
Trigger: GTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGGACTCCGATGTAAATaGTATGGTGGCCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRGLRCK*YGGLLL
Trigger: AAGTAGAAGGCCACCATACCATTTACATCGGAGTCC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAGATTCCTATGGGTCATaGCTGGGCTACCATTATCAG +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTDSYGS*LGYHYQ
Trigger: CTGATAATGGTAGCCCAGCCATGACCCATAGGAATC...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAAACTTATTCTTCAGCTaGTCCTTCTCCGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILNLFFS*SFSGLS
Trigger: TGATAAACCGGAGAAGGACCAGCTGAAGAATAAGTT...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTCTTTTGTCAGAGGATaGAAGACTCTTAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLSFVRG*KTLRRL
Trigger: GAGCCTCCTAAGAGTCTTCCATCCTCTGACAAAAGA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGCTCAGAATAGTGAGTaGTTGACCAGCAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSAQNSE*LTSKKA
Trigger: TGCCTTTTTGCTGGTCAACCACTCACTATTCTGAGC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATATTAGCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNISWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGCTAAT...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAATTAGCTGGGTCAGGTaGCACACAGGTACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTISWVR*HTGTGK
Trigger: TTTTCCTGTACCTGTGTGCCACCTGACCCAGCTAAT...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATCGGTTTGGACTTGTTaGCTTGAACTCACTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTSVWTC*LELTWH
Trigger: GTGCCAAGTGAGTTCAAGCCAACAAGTCCAAACCGA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATTTCTTGTCCTTTTCTaGAATGACATCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKFLVLF*NDIIQE
Trigger: TTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCTTTCTTGTCCTTTTCTaGAATGACATCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPFLVLF*NDIIQE
Trigger: TTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAA...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATTTTTACAGAAAGCCTaGCAGCTACAAATAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKFLQKA*QLQIRG
Trigger: ACCTCTTATTTGTAGCTGCCAGGCTTTCTGTAAAAA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTATCTGATCTTGCCTTCTaGCTTACCCTAGAGATTGTG +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLSDLAF*LTLEIV
Trigger: CACAATCTCTAGGGTAAGCCAGAAGGCAAGATCAGA...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTTATATACACCAGCCATaGCACAGAGCACATACACAA +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSYIHQP*HRAHTQ
Trigger: TTGTGTATGTGCTCTGTGCCATGGCTGGTGTATATA...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCACAACTTGACTGGTTaGCGTATTACACAACTTTTT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSHNLTG*RITQLF
Trigger: AAAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCCTTCCACATTTTCAGTaGACATCTTTCCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSLPHFQ*TSFLLS
Trigger: GCTTAGCAGGAAAGATGTCCACTGAAAATGTGGAAG...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTGGTTAAACATTGGCTaGACAACCCTGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLWLNIG*TTLRKV
Trigger: CACTTTCCTCAGGGTTGTCCAGCCAATGTTTAACCA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGAAAATTTGCAAGCATaGAGCCTACACCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLENLQA*SLHLPP
Trigger: TGGAGGAAGGTGTAGGCTCCATGCTTGCAAATTTTC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTCTTTTTCTTCAAACTTaGTCCACCTGGCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTLFLQT*STWLFP
Trigger: AGGAAACAGCCAGGTGGATCAAGTTTGAAGAAAAAG...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGCTCAAATAAACTATaGAGGGACAATGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRSSNKL*RDNVAT
Trigger: TGTGGCCACATTGTCCCTTCATAGTTTATTTGAGCT...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCAGAATAGTGAGTGGTTaGCCAGCAAAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLRIVSG*PAKRQK
Trigger: CTTTTGCCTTTTTGCTGGTCAACCACTCACTATTCT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGTTTCCTCCGTATTTTaGACACTCCTTCTTCGACAA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTVSSVF*TLLLRQ
Trigger: TTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAAC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTCAAAAGAGATCCAAGTaGTACCCTGCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVQKRSK*YPAPFL
Trigger: CAAGAAAGGAGCAGGGTATCACTTGGATCTCTTTTG...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAACAAAAGAGATCCAAGTaGTACCCTGCTCCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKQKRSK*YPAPFL
Trigger: CAAGAAAGGAGCAGGGTATCACTTGGATCTCTTTTG...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCACTTGGAACTTTTTCTaGGTATGGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSTWNFF*VWAVRI
Trigger: GATTCTGACTGCCCATACTCAGAAAAAGTTCCAAGT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR TCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGTATTATTTGGCCTGTaGCCAAAAACTGAGACGAAA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFVLFGL*PKTETK
Trigger: TTTCGTCTCAGTTTTTGGTCACAGGCCAAATAATAC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGATGTCTGTGTCTTGAGTaGCAGAATTTGGTTATCAAA +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRCLCLE*QNLVIK
Trigger: TTTGATAACCAAATTCTGTCACTCAAGACACAGACA...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGACCAGAATTTGGCAAGTaGGGTTTTAACACAATAACA +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRPEFGK*GFNTIT
Trigger: TGTTATTGTGTTAAAACCTCACTTGCCAAATTCTGG...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTCCTCTACTCAGAGGCTaGAATGATGAGTTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVPLLRG*NDELSC
Trigger: GCAACTTAACTCATCATTTCAGCCTCTGAGTAGAGG...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACCTACAAAATATCACTTaGTTGTACCCAGCCATTTGG +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNLQNIT*LYPAIW
Trigger: CCAAATGGCTGGGTACAATCAAGTGATATTTTGTAG...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACAATATGTACCAGCCATaGAAATGGCTAAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNNMYQP*KWLKRG
Trigger: GCCTCTTTTTAGCCATTTTCATGGCTGGTACATATT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCACCATGACAGCATGTTaGAAATTTGCAAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLTMTAC*KFASME
Trigger: CTCCATGCTTGCAAATTTTCAACATGCTGTCATGGT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAGAGGTTTTAGGATGCTaGTGCTGGATTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKEVLGC*CWIHQH
Trigger: ATGCTGATGAATCCAGCAGCAGCATCCTAAAACCTC...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCTTCTTCGACAAAAATaGCCAGTCAAAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSLLRQK*PVKGSI
Trigger: AATACTACCTTTGACTGGGCATTTTTGTCGAAGAAG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTATCCAAGTGATACCCTaGTCCTTTCTTGAGTTTATG +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSIQVIP*SFLEFM
Trigger: CATAAACTCAAGAAAGGAGCAGGGTATCACTTGGAT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACATCCAAGTGATACCCTaGTCCTTTCTTGAGTTTATG +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNIQVIP*SFLEFM
Trigger: CATAAACTCAAGAAAGGAGCAGGGTATCACTTGGAT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTCACACCATTAAGGGATaGTACTCCCATATACAGGAA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTHTIKG*YSHIQE
Trigger: TTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTG...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGTCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRSLRKG*CSMMSI
Trigger: AATGGACATCATGGAACAGCAACCTTTCCTAAGCGA...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: VFKERCTIVLIVSMQERSVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTAATACTTCCATCCTCTaGTTAATAGAGGCAAAGGAC +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSNTSIL*LIEAKD
Trigger: GTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTATT...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACAATTTGTGTCCAGTTTaGATAGAAACAAAACCACCA +
Preference number: 4 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHNLCPV*IETKPP
Trigger: TGGTGGTTTTGTTTCTATGCAAACTGGACACAAATT...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCTCTGTATGGGTTGGTaGATGAGCATAAAATACACG +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRLCMGW*MSIKYT
Trigger: CGTGTATTTTATGCTCATGCACCAACCCATACAGAG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CCA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCTTAGGATGCTGCTGCTaGATTCATCAGCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFLGCCC*IHQHFQ
Trigger: TTGAAAATGCTGATGAATCCAGCAGCAGCATCCTAA...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: ESFISGSHIMEKGEALIKKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACAACTTATTCTTCAGCTaGTCCTTCTCCGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNNLFFS*SFSGLS
Trigger: TGATAAACCGGAGAAGGACCAGCTGAAGAATAAGTT...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATCAAAGGTAGTATTATaGTACATGTCAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSKVVL*YMSVED
Trigger: GTCTTCTACTGACATGTACCATAATACTACCTTTGA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAATGCCAAGATCATTACTaGAAAAATGATAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKCQDHY*KNDSSH
Trigger: GTGGCTGCTATCATTTTTCCAGTAATGATCTTGGCA...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATAGGCACAACTTTTACTaGAGTTCTAGGAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNRHNFY*SSRRTW
Trigger: CCAAGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCT...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAAGAAGGGACTCTGTCTaGAGGTCAAGGTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTRRDSV*RSRFVL
Trigger: TAGAACAAACCTTGACCTCCAGACAGAGTCCCTTCT...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAAAACCACCACCAAATCTaGTTCATTCTTAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKNHHQI*FILSQW
Trigger: CCATTGACTAAGAATGAACCAGATTTGGTGGTGGTT...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTATTACTCTGTATGGGTTaGTGCATGAGCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: HESTVTLYSAALQSHYILLLCMG*CMSIKY
Trigger: GTATTTTATGCTCATGCACCAACCCATACAGAGTAA...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAAAAACACAACTTGACTaGTTGGCGTATTACACAACT +
Preference number: 4 (lower is better)
Translates to: FKERCTIVLIVSMQERSRKTQLD*LAYYTT
Trigger: AGTTGTGTAATACGCCAACCAGTCAAGTTGTGTTTT...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCACATATCTAAATCTCTaGCCAAAACACAACTTGACT +
Preference number: 4 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSTYLNL*PKHNLT
Trigger: AGTCAAGTTGTGTTTTGGCCAGAGATTTAGATATGT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCACATTTTCAGTaGACATCTTTCCTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLLPHFQ*TSFLLS
Trigger: GCTTAGCAGGAAAGATGTCCACTGAAAATGTGGAAG...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
3UTR CAA 72 bp GTTTCACTGGATGACTTTAGCCCTGAGTTGCAATGTTaGCCTAGGAAACAGAATTCTTGCTTTTTATACGTA +
Preference number: 4 (lower is better)
Translates to: VSLDDFSPELQC*PRKQNSCFLYV
Trigger: TACGTATAAAAAGCAAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGTCATCCAGTGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACAGTTGCCAGATAAATaGAGAGAATTGCCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTQLPDK*RELPKE
Trigger: CTCTTTCGGCAATTCTCTTCATTTATCTGGCAACTG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAACTTGGAACTTTTTCTaGGTATGGGCAGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTTWNFF*VWAVRI
Trigger: GATTCTGACTGCCCATACTCAGAAAAAGTTCCAAGT...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAGGAATTTTATCAGCATaGTGTGTGGCGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKGILSA*CVAFKE
Trigger: TTCCTTGAACGCCACACATCATGCTGATAAAATTCC...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAGGCATACCGAGTGACTaGAGGAAAGGAATTTTATCA +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKGIPSD*RKGILS
Trigger: TGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCC...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTT +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTTWHTE*LKERNF
Trigger: AAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGT...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAGGTGCACTATTGTCTTaGTTGTGTCTATGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKGALLS*LCLCKR
Trigger: TCTCTTGCATAGACACAATCAAGACAATAGTGCACC...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTCAGCACTTGCTACAATaGTGGCAATGGTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVQHLLQ*WQWFLY
Trigger: ATAGAGAAACCATTGCCATCATTGTAGCAAGTGCTG...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACGATCACGGGTTAAGCTaGATTTACTATACATGGTTT +
Preference number: 4 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNDHGLS*IYYTWF
Trigger: AAACCATGTATAGTAAATTCAGCTTAACCCGTGATC...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCAAAATACACGCAAACTaGATTACAGACAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSKIHAN*ITDSRQ
Trigger: TTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCTTCAAGGAATGTTGGTaGTCTTTCTCATCATCATTG +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSFKECW*SFSSSL
Trigger: CAATGATGATGAGAAAGATCACCAACATTCCTTGAA...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425175.5
CDS-3UTR TCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCAAATACCTCAGGCAATaGGACATCAAATTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLKYLRQ*DIKFSS
Trigger: GCTACTGAATTTGATGTCTCATTGCCTGAGGTATTT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGTTTTAGGATGCTGCTaGTGGATTCATCAGCATTTT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRVLGCC*WIHQHF
Trigger: AAAATGCTGATGAATCCAGCAGCAGCATCCTAAAAC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGATGGGGTAGTAATCTaGAAGCTTGATCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRDGVVI*KLDHLL
Trigger: AAGAAGATGATCAAGCTTGCAGATTACTACCCCATC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR GCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATCACACCATTAAGGGATaGTACTCCCATATACAGGAA +
Preference number: 4 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNHTIKG*YSHIQE
Trigger: TTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTG...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACACACCATTAAGGGATaGTACTCCCATATACAGGAA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTHTIKG*YSHIQE
Trigger: TTCCTGTATATGGGAGTAGCATCCCTTAATGGTGTG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCTCTGACAGCTACAAGTaGCAAGATCATTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSSDSYK*QDHYWK
Trigger: TTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGA...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAACTGAGTTGCAATGTTTaGCTAGGAAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKLSCNV*LGNRIL
Trigger: AAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAG...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTTAGGATGCTGCTGCTaGATTCATCAGCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTLGCCC*IHQHFQ
Trigger: TTGAAAATGCTGATGAATCCAGCAGCAGCATCCTAA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCAACTTATTCTTCAGCTaGTCCTTCTCCGGTTTATCA +
Preference number: 4 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLNLFFS*SFSGLS
Trigger: TGATAAACCGGAGAAGGACCAGCTGAAGAATAAGTT...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAATTGAACCAAGAAGCTaGCATCAGTGGCTACCAAAA +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKIEPRS*HQWLPK
Trigger: TTTTGGTAGCCACTGATGCCAGCTTCTTGGTTCAAT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTGCCAAGATCATTACTaGAAAAATGATAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTCQDHY*KNDSSH
Trigger: GTGGCTGCTATCATTTTTCCAGTAATGATCTTGGCA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTTTTTTACAGAAAGCCTaGCAGCTACAAATAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSFLQKA*QLQIRG
Trigger: ACCTCTTATTTGTAGCTGCCAGGCTTTCTGTAAAAA...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAACCACCACCAAATCTaGTTCATTCTTAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSNHHQI*FILSQW
Trigger: CCATTGACTAAGAATGAACCAGATTTGGTGGTGGTT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCAAAACACAACTTGACTaGTTGGCGTATTACACAACT +
Preference number: 4 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSKTQLD*LAYYTT
Trigger: AGTTGTGTAATACGCCAACCAGTCAAGTTGTGTTTT...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCCCAGAATTTGGCAAGTaGGGTTTTAACACAATAACA +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSPEFGK*GFNTIT
Trigger: TGTTATTGTGTTAAAACCTCACTTGCCAAATTCTGG...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTAAAATACACGCAAACTaGATTACAGACAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTKIHAN*ITDSRQ
Trigger: TTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTT...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR TCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAAATTTCAGGCTGCAATaGAGCTCAATGAAATCATCT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLNFRLQ*SSMKSS
Trigger: AGATGATTTCATTGAGCTTCATTGCAGCCTGAAATT...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATCTGACAGCTACAAGTaGCAAGATCATTACTGGAAA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTSDSYK*QDHYWK
Trigger: TTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCGCATCTGTACCTAGATaGTACTATTATCAGAACATC +
Preference number: 4 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPASVPR*YYYQNI
Trigger: GATGTTCTGATAATAGTAGCATCTAGGTACAGATGC...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTATGTACTCTGCAGCTCTaGAATCCCATTACATTTTAT +
Preference number: 4 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLCTLQL*NPITFY
Trigger: ATAAAATGTAATGGGATTGCAGAGCTGCAGAGTACA...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGTAAACCTCAGGTTTTaGTTGTTAGTTTGGTTAACT +
Preference number: 4 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKVNLRF*LLVWLT
Trigger: AGTTAACCAAACTAACAAGCAAAACCTGAGGTTTAC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGTATCAAGGAAAACAGTaGGTCCAAGATACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRYQGKQ*VQDTFL
Trigger: GAGAAAAGTATCTTGGACGCACTGTTTTCCTTGATA...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR GCA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCTGAGTTGCAATGTTTaGCTAGGAAACAGAATTCTT +
Preference number: 4 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRLSCNV*LGNRIL
Trigger: AAGAATTCTGTTTCCTAGGCAAACATTGCAACTCAG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATTAGGATGCTGCTGCTaGATTCATCAGCATTTTCAA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTLGCCC*IHQHFQ
Trigger: TTGAAAATGCTGATGAATCCAGCAGCAGCATCCTAA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCCACAACTTGACTGGTTaGCGTATTACACAACTTTTT +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSHNLTG*RITQLF
Trigger: AAAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTG...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAAAACACAACTTGACTaGTTGGCGTATTACACAACT +
Preference number: 4 (lower is better)
Translates to: MSIKYTQTELQTADNCFSKTQLD*LAYYTT
Trigger: AGTTGTGTAATACGCCAACCAGTCAAGTTGTGTTTT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR TCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAACTCCTTCTCCACTTATaGCTCATCCAAAATTATAAG +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKLLLHL*LIQNYK
Trigger: CTTATAATTTTGGATGAGTCATAAGTGGAGAAGGAG...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR GCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAACTTCTTCGACAAAAATaGCCAGTCAAAGGTAGTATT +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKLLRQK*PVKGSI
Trigger: AATACTACCTTTGACTGGGCATTTTTGTCGAAGAAG...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR GCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAGTTTTTAAGGAACGGTaGACTATTGTCTTGATTGTG +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTVFKER*TIVLIV
Trigger: CACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR GCA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTGCATCTGTACCTAGATaGTACTATTATCAGAACATC +
Preference number: 4 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVASVPR*YYYQNI
Trigger: GATGTTCTGATAATAGTAGCATCTAGGTACAGATGC...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTAT +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTKCHSD*RKSDSY
Trigger: ATAGGAATCTGACTTCCTCCAGTCTGAATGACATTT...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTCAAAGGTAGTATTATaGTACATGTCAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSKVVL*YMSVED
Trigger: GTCTTCTACTGACATGTACCATAATACTACCTTTGA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATTTCTTGTCCTTTTCTaGAATGACATCATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTFLVLF*NDIIQE
Trigger: TTCCTGGATGATGTCATTCCAGAAAAGGACAAGAAA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CCA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATTTACTCTGTATGGGTTaGTGCATGAGCATAAAATAC +
Preference number: 4 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNLLCMG*CMSIKY
Trigger: GTATTTTATGCTCATGCACCAACCCATACAGAGTAA...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
3UTR CAA 72 bp ATAATCATTGTCTTCAGGTTCAAGTTCTATTCTAATTaGAGGCACAACTTTTACTGGAGTTCTAGGAGGACT +
Preference number: 4 (lower is better)
Translates to: IIIVFRFKFYSN*RHNFYWSSRRT
Trigger: AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAAGACAATGATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CCA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATCAAAGGTAGTATTATaGTACATGTCAGTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTSKVVL*YMSVED
Trigger: GTCTTCTACTGACATGTACCATAATACTACCTTTGA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CCA 90 bp CCTGGGGTCTGGCTTCCGTCGCTCCTCCAGTTTGGCGGCGGAGTGTaGGGCTGCAGCGGCCACTGCCACTGCCGCCGCCGCCGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: PGVWLPSLLQFGGGV*GCSGHCHCRRRRRL
Trigger: AAGGCGGCGGCGGCGGCGGCAGTGGCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGACGGAAGCCAGACCCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS GCA 90 bp CTGCTACTGCTTCACGCAGCTCCTCTCATCTGGTGCTCGAGAATATaGCGGTCCCACATAGCTTCAGTTCTAACCTTGAGAGGGCACCCA +
Preference number: 5 (lower is better)
Translates to: LLLLHAAPLIWCSRI*RSHIASVLTLRGHP
Trigger: TGGGTGCCCTCTCAAGGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS CCA 90 bp GATAGCAGCAGCAAGGCACACCCACCAGGGGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTTTGGACTTGTTGGCTTGAACTCACT +
Preference number: 5 (lower is better)
Translates to: DSSSKAHPPGVFSKR*NEPTSVWTCWLELT
Trigger: AGTGAGTTCAAGCCAACAAGTCCAAACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAACCCCTGGTGGGTGTGCCTTGCTGCTGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS GCA 90 bp TTCATGTTAGCAGGGCAGAGTCACTCTTCTTCTGGTGTCTGCTACTaGTTCACGCAGCTCCTCTCATCTGGTGCTCGAGAATATGCCGGT +
Preference number: 5 (lower is better)
Translates to: FMLAGQSHSSSGVCY*FTQLLSSGAREYAG
Trigger: ACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAGTGACTCTGCCCTGCTAACATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS CCA 90 bp GCAGGAGAGACTGCAGAAGTGAAAATACTGTGGTTAAACATTGGCTaGACAACCCTGAGGAAAGTGGAGCTCCGGGCTCTTCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: AGETAEVKILWLNIG*TTLRKVELRALPLS
Trigger: GGAGAGAGGAAGAGCCCGGAGCTCCACTTTCCTCAGGGTTGTCCAGCCAATGTTTAACCACAGTATTTTCACTTCTGCAGTCTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340595.4
ENST00000512686.5
CDS CCA 90 bp CTCTTCTTCTGGTGTCTGCTACTGCTTCACGCAGCTCCTCTCATCTaGTGCTCGAGAATATGCCGGTCCCACATAGCTTCAGTTCTAACC +
Preference number: 5 (lower is better)
Translates to: LFFWCLLLLHAAPLI*CSRICRSHIASVLT
Trigger: GGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGTGGCCACATGGGGCTaGCTCCATCTTTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCVATWG*LHLSPP
Trigger: GGGTGGGGAAAGATGGAGCAAGCCCCATGTGGCCAC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS GCA 90 bp TTCTTCTGGTGTCTGCTACTGCTTCACGCAGCTCCTCTCATCTGGTaGTCGAGAATATGCCGGTCCCACATAGCTTCAGTTCTAACCTTG +
Preference number: 5 (lower is better)
Translates to: FFWCLLLLHAAPLIW*SRICRSHIASVLTL
Trigger: CAAGGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTCCCCAACAAGCACGTaGGAAGCTTCTGCATCACGT +
Preference number: 5 (lower is better)
Translates to: AALFPVLESSISEKGLCLSPTST*EASASR
Trigger: ACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACACCCCACTCCTCAACCTaGATTGGGAGAAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTPHSST*IGRRGR
Trigger: CCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGGG...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS TCA 90 bp AAATGGTATGGTGGCCTTCTACTTCTTCTTCATCACACACATGCTTaGGGAAGGAAGCCCCTCTGTCCAGGACAGCTTCATCCTCCATCC +
Preference number: 5 (lower is better)
Translates to: KWYGGLLLLLHHTHA*GRKPLCPGQLHPPS
Trigger: GGATGGAGGATGAAGCTGTCCTGGACAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGAAGAAGTAGAAGGCCACCATACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000638464.1
ENST00000639096.1
CDS GCA 90 bp CTTGTGGGCACAGGAACTTCAGTCAGGGCACCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCAATGAAAGGAGTATCCAAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LVGTGTSVRAPSMTA*CSLTKAMKGVSKKS
Trigger: TGACTTTTTGGATACTCCTTTCATTGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGGTGCCCTGACTGAAGTTCCTGTGCCCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS GCA 90 bp CTGTTGTTCATGTTAGCAGGGCAGAGTCACTCTTCTTCTGGTGTCTaGTACTGCTTCACGCAGCTCCTCTCATCTGGTGCTCGAGAATAT +
Preference number: 5 (lower is better)
Translates to: LLFMLAGQSHSSSGV*YCFTQLLSSGAREY
Trigger: ATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAGTGACTCTGCCCTGCTAACATGAACAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS CCA 90 bp CAGGACAGCTTCATCCTCCATCCAAGAGAGGAAGTTTGGTGTGTCTaGAGTGCTCGTGATGATCGTTTGTGGAAATCCAGCTTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: QDSFILHPREEVWCV*SARDDRLWKSSFSA
Trigger: AGCACTGAAGCTGGATTTCCACAAACGATCATCACGAGCACTCCAGACACACCAAACTTCCTCTCTTGGATGGAGGATGAAGCTGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638464.1
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCCCCCACTCCTCAACCTaGATTGGGAGAAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCPHSST*IGRRGR
Trigger: CCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGGG...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS TCA 90 bp AAATGGTATGGTGGCCTTCTACTTCTTCTTCATCACACACATGCTTaGGGAAGGAAGCCCCTCTGTCCAGGACAGCTTCATCCTCCATCA +
Preference number: 5 (lower is better)
Translates to: KWYGGLLLLLHHTHA*GRKPLCPGQLHPPS
Trigger: TGATGGAGGATGAAGCTGTCCTGGACAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGAAGAAGAAGTAGAAGGCCACCATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649996.1
CDS GCA 90 bp CTCCTCTCCCAAGATGAATCGGATGCGTTCTGCAGCAGGAGAGACTaGAGAAGTGAAAATACTGTGGTTAAACATTGGCTGGACAACCCT +
Preference number: 5 (lower is better)
Translates to: LLSQDESDAFCSRRD*RSENTVVKHWLDNP
Trigger: AGGGTTGTCCAGCCAATGTTTAACCACAGTATTTTCACTTCTGCAGTCTCTCCTGCTGCAGAACGCATCCGATTCATCTTGGGAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340595.4
ENST00000512686.5
CDS GCA 90 bp AGCTGGGCTGTCATCCTCCTCTCCCAAGATGAATCGGATGCGTTCTaGAGCAGGAGAGACTGCAGAAGTGAAAATACTGTGGTTAAACAT +
Preference number: 5 (lower is better)
Translates to: SWAVILLSQDESDAF*SRRDCRSENTVVKH
Trigger: ATGTTTAACCACAGTATTTTCACTTCTGCAGTCTCTCCTGCTGCAGAACGCATCCGATTCATCTTGGGAGAGGAGGATGACAGCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340595.4
ENST00000512686.5
CDS CCA 90 bp AAAGCGAGCATAAACACAAAGCGTAATGCCCTCACCTGGGTCAGGTaGCACACAGGTACAGGAAAAGAGAGTGTTGTAGCCCACTTTGAA +
Preference number: 5 (lower is better)
Translates to: KASINTKRNALTWVR*HTGTGKESVVAHFE
Trigger: TTCAAAGTGGGCTACAACACTCTCTTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAGGGCATTACGCTTTGTGTTTATGCTCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS CCA 90 bp TCCAAATACAAAGCGAGCATAAACACAAAGCGTAATGCCCTCACCTaGGTCAGGTGGCACACAGGTACAGGAAAAGAGAGTGTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: SKYKASINTKRNALT*VRWHTGTGKESVVA
Trigger: GGCTACAACACTCTCTTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAGGGCATTACGCTTTGTGTTTATGCTCGCTTTGTATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATCATCACACACATGCTaGAGGAAGGAAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKSSHTC*RKEAPL
Trigger: CAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGTTGGCACAATTAGTTTaGGGGTGTCCACGCCTACTA +
Preference number: 5 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVLAQLV*GCPRLL
Trigger: TAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAA...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGAGAGATTCAATGACTTaGCCCTCTGCCTACCATCAC +
Preference number: 5 (lower is better)
Translates to: ALFPVLESSISEKGLCLERDSMT*PSAYHH
Trigger: GTGATGGTAGGCAGAGGGCAAAGTCATTGAATCTCT...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGTCCCCAACAAGCACGTaGGAAGCTTCTGCATCACGT +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWSPTST*EASASR
Trigger: ACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGA...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVGTKLQ*FPTRFP
Trigger: AGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: AALFPVLESSISEKGLCLRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 5 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 5 (lower is better)
Translates to: AALFPVLESSISEKGLCLSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCATTGTACCCAGCCATTaGGTGCCACTGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCIVPSH*VPLGFM
Trigger: CATGAAGCCCAGTGGCACCAAATGGCTGGGTACAAT...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS TCA 90 bp ATTCTGTGTGATGTGTCACAAAGAACCTTTAGCCCTCAGATGAGCTaGGGTCTAACCACTCACTTCCCCTCCTTCTCCACTTATGACTCA +
Preference number: 5 (lower is better)
Translates to: ILCDVSQRTFSPQMS*GLTTHFPSFSTYDS
Trigger: TGAGTCATAAGTGGAGAAGGAGGGGAAGTGAGTGGTTAGACCTCAGCTCATCTGAGGGCTAAAGGTTCTTTGTGACACATCACACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS CCA 90 bp TCTTCAGCTGGTCCTTCTCCGGTTTATCAGAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTATGGGTCATGGCTGGGCTACCATTAT +
Preference number: 5 (lower is better)
Translates to: SSAGPSPVYQKCHSD*RKSDSYGSWLGYHY
Trigger: ATAATGGTAGCCCAGCCATGACCCATAGGAATCTGACTTCCTCCAGTCTGAATGACATTTCTGATAAACCGGAGAAGGACCAGCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS-3UTR CAA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATCATCACACACATGCTaGAGGAAGGAAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSSHTC*RKEAPL
Trigger: CAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TACTTCCATCCTCTGCTTAATAGAGGCAAAGGACAGGGTCTGTGCGTGTCTGTGCTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: YFHPLLNRGKGQGLCVSVLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...CACAGACACGCACAGACCCTGTCCTTTGCCTCTATTAAGCAGAGGATGGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCTCCCCAACAAGCACGTaGGAAGCTTCTGCATCACGT +
Preference number: 5 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPSPTST*EASASR
Trigger: ACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGA...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTCCCCAACAAGCACGTaGGAAGCTTCTGCATCACGT +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSPTST*EASASR
Trigger: ACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: ALFPVLESSISEKGLCLEGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTTTGGACTTGTTGGCTaGAACTCACTTGGCACAATT +
Preference number: 5 (lower is better)
Translates to: AALFPVLESSISEKGLCLFGLVG*NSLGTI
Trigger: AATTGTGCCAAGTGAGTTCAAGCCAACAAGTCCAAA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGTTTGGACTTGTTGGCTaGAACTCACTTGGCACAATT +
Preference number: 5 (lower is better)
Translates to: ALFPVLESSISEKGLCLEFGLVG*NSLGTI
Trigger: AATTGTGCCAAGTGAGTTCAAGCCAACAAGTCCAAA...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATGCTTCAGGAGTTCTTaGAAAGGTATAGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKCFRSS*KGIERG
Trigger: GCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTGCTTCAGGAGTTCTTaGAAAGGTATAGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLCFRSS*KGIERG
Trigger: GCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTCATCACACACATGCTaGAGGAAGGAAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSSSHTC*RKEAPL
Trigger: CAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAACACGCCCTGCATGTaGTCAGTGGCATCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRNTPCM*SVASPS
Trigger: GCTTGGGGATGCCACTGACAACATGCAGGGCGTGTT...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLGTKLQ*FPTRFP
Trigger: AGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCC...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTTGGCACAATTAGTTTaGGGGTGTCCACGCCTACTA +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCLAQLV*GCPRLL
Trigger: TAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAATCTCTGTCAGAAGGTTaGCTATCGCTTAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKSLSEG*LSLRKG
Trigger: ACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGA...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GCAGCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGTTTTGCCTTCTAACATaGCACATATATACACCAGCC +
Preference number: 5 (lower is better)
Translates to: AALFPVLESSISEKGLCLFCLLT*HIYTPA
Trigger: GGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAA...CAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCCCCACTCCTCAACCTaGATTGGGAGAAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRPHSST*IGRRGR
Trigger: CCTGCCTCTTCTCCCAATCAAGGTTGAGGAGTGGGG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAATTGTACCCAGCCATTaGGTGCCACTGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: ESFISGSHIMEKGEALIKIVPSH*VPLGFM
Trigger: CATGAAGCCCAGTGGCACCAAATGGCTGGGTACAAT...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGACTTTAGCCCTGAGTaGCAATGTTTGCCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTDFSPE*QCLPRK
Trigger: TTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGTC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS TCA 90 bp GAGTACAGGCATGGGTATAAACTTCAAGATGGGAGCCATAAAGACTaGCAGACCAGTCAGAATAAACACAAGGGTTCCAGTGACTCTTTG +
Preference number: 5 (lower is better)
Translates to: EYRHGYKLQDGSHKD*QTSQNKHKGSSDSL
Trigger: CAAAGAGTCACTGGAACCCTTGTGTTTATTCTGACTGGTCTGTCAGTCTTTATGGCTCCCATCTTGAAGTTTATACCCATGCCTGTACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAACTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTGGCACAATTAGTTTaGGGGTGTCCACGCCTACTA +
Preference number: 5 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHLAQLV*GCPRLL
Trigger: TAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAA...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATTGGCACAATTAGTTTaGGGGTGTCCACGCCTACTA +
Preference number: 5 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKLAQLV*GCPRLL
Trigger: TAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATTTGGACTTGTTGGCTaGAACTCACTTGGCACAATT +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTFGLVG*NSLGTI
Trigger: AATTGTGCCAAGTGAGTTCAAGCCAACAAGTCCAAA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTCACTCCTAGAAACTTaGGTTGTTCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSLLET*VVLQVQ
Trigger: CTGCACCTGGAGAACAACCAAAGTTTCTAGGAGTGA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAACAGTCAGAATCATCATaGTCACTGTCCAGACTTCCC +
Preference number: 5 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKQSESS*SLSRLP
Trigger: GGGAAGTCTGGACAGTGACAATGATGATTCTGACTG...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCCGGTGCACTATTGTCTaGATTGTGTCTATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCRCTIV*IVSMQE
Trigger: CTCTTGCATAGACACAATCAAGACAATAGTGCACCG...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GCACTTTTTCCAGTCCTGGAGAGCTCTATAAGTGAGAAGGGACTCTGTCTGGAGGTTTTGCTTGTTAGTTaGGTTAACTACTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: ALFPVLESSISEKGLCLEVLLVS*VNYFCS
Trigger: GGAACAGAAGTAGTTAACCAAACTAACAAGCAAAAC...CTCCAGACAGAGTCCCTTCTCACTTATAGAGCTCTCCAGGACTGGAAAAAGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCATTGTACCCAGCCATTaGGTGCCACTGGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFIVPSH*VPLGFM
Trigger: CATGAAGCCCAGTGGCACCAAATGGCTGGGTACAAT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAACCTGAGTTGCAATGTTaGCCTAGGAAACAGAATTCT +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKPELQC*PRKQNS
Trigger: AGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGG...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCAGCATGTTGAAAATTaGCAAGCATGGAGCCTACAC +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWQHVEN*QAWSLH
Trigger: GTGTAGGCTCCATGCTTGCAAATTTTCAACATGCTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCTCATCACACACATGCTaGAGGAAGGAAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPSSHTC*RKEAPL
Trigger: CAGAGGGGCTTCCTTCCTCAAGCATGTGTGTGATGA...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTCCCCAACAAGCACGTaGGAAGCTTCTGCATCACGT +
Preference number: 5 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSPTST*EASASR
Trigger: ACGTGATGCAGAAGCTTCCAACGTGCTTGTTGGGGA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCATACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCAGAATAGTGAGTGGTaGACCAGCAAAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWQNSEW*TSKKAK
Trigger: TTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACA +
Preference number: 5 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHGFLRI*NTPSST
Trigger: TGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACC...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSGTKLQ*FPTRFP
Trigger: AGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCTTTGGACTTGTTGGCTaGAACTCACTTGGCACAATT +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCFGLVG*NSLGTI
Trigger: AATTGTGCCAAGTGAGTTCAAGCCAACAAGTCCAAA...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAATCTCTGTCAGAAGGTTaGCTATCGCTTAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: KVCSTRQRQASKHSSKAKSLSEG*LSLRKG
Trigger: ACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGA...TTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTCTCTGTCAGAAGGTTaGCTATCGCTTAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSSLSEG*LSLRKG
Trigger: ACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAGGCGTTCAAGGAATGTaGGTGATCTTTCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: ESFISGSHIMEKGEALIKGVQGM*VIFLCQ
Trigger: CTGACAGAGAAAGATCACCAACATTCCTTGAACGCC...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGGCGTTCAAGGAATGTaGGTGATCTTTCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: FKERCTIVLIVSMQERSRGVQGM*VIFLCQ
Trigger: CTGACAGAGAAAGATCACCAACATTCCTTGAACGCC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGCGTTCAAGGAATGTaGGTGATCTTTCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGVQGM*VIFLCQ
Trigger: CTGACAGAGAAAGATCACCAACATTCCTTGAACGCC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCGGTGCACTATTGTCTaGATTGTGTCTATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSRCTIV*IVSMQE
Trigger: CTCTTGCATAGACACAATCAAGACAATAGTGCACCG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCCCTACCATCACTCTTTaGCCTTCTAACATTGCACAT +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCPTITL*PSNIAH
Trigger: ATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGG...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GGAGAAGAGGCAGGGACATTACTGCCCCTGGCACACAAAACAATTAGAATTCCAAACCTCAGGTTTTGCTaGTTAGTTTGGTTAACTACT +
Preference number: 5 (lower is better)
Translates to: GEEAGTLLPLAHKTIRIPNLRFC*LVWLTT
Trigger: AGTAGTTAACCAAACTAACAAGCAAAACCTGAGGTT...TGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTAATGTCCCTGCCTCTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACAGGTAAACCTCAGGTTTaGCTTGTTAGTTTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTGKPQV*LVSLVN
Trigger: GTTAACCAAACTAACAAGCAAAACCTGAGGTTTACC...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAACACAACTTGACTGGTaGGCGTATTACACAACTTTT +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKTQLDW*AYYTTF
Trigger: AAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTGT...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CTGAGGAGAGAGGTTTTTGTTTTCCTACTTCTTAAGTCAGTTAAGTCCTCTCCCTGGCCAAAACACAACTaGACTGGTTGGCGTATTACA +
Preference number: 5 (lower is better)
Translates to: LRREVFVFLLLKSVKSSPWPKHN*TGWRIT
Trigger: TGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCCA...GGGAGAGGACTTAACTGACTTAAGAAGTAGGAAAACAAAAACCTCTCTCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGCCCTTCTCTATTCCTTaGGTTCTGAACTGTATCTTG +
Preference number: 5 (lower is better)
Translates to: QNIELVMFTFQSSWSPSWPFSIP*VLNCIL
Trigger: CAAGATACAGTTCAGAACCAAAGGAATAGAGAAGGG...CCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TATCTTTTGAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTCTTTCTCATCATCATaGTCACTGTCCAGACTTCCC +
Preference number: 5 (lower is better)
Translates to: YLLNPLSPEVTSWRREKHSFSSS*SLSRLP
Trigger: GGGAAGTCTGGACAGTGACAATGATGATGAGAAAGA...GTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTCAAAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425175.5
CDS GCA 90 bp AAAACAAGACTAATTCCTGAGGACCATGACAGCATGTTGAAAATTTaGAAGCATGGAGCCTACACCTTCCTCCAAATACAAAGCGAGCAT +
Preference number: 5 (lower is better)
Translates to: KTRLIPEDHDSMLKI*KHGAYTFLQIQSEH
Trigger: ATGCTCGCTTTGTATTTGGAGGAAGGTGTAGGCTCCATGCTTGCAAATTTTCAACATGCTGTCATGGTCCTCAGGAATTAGTCTTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS CCA 90 bp ATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTaGTTGAATCATACAGCTAAAATACCTCAGGCAATGAGACATCAA +
Preference number: 5 (lower is better)
Translates to: IELVMFTFQSSWSPS*LNHTAKIPQAMRHQ
Trigger: TTGATGTCTCATTGCCTGAGGTATTTTAGCTGTATGATTCAACCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS-3UTR CAA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACAGTTGGATTTCTTGGTTaGATGCCGGTGCTTCCGGAG +
Preference number: 5 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTVGFLG*MPVLPE
Trigger: CTCCGGAAGCACCGGCATCAAACCAAGAAATCCAAC...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTTACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: VSATTARTFWLTTLSVLCYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCAGAATAGTGAGTGGTaGACCAGCAAAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSQNSEW*TSKKAK
Trigger: TTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACA +
Preference number: 5 (lower is better)
Translates to: FKERCTIVLIVSMQERSRGFLRI*NTPSST
Trigger: TGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCTACCCTGCTCCTTTCTaGAGTTTATGTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSYPAPF*SLCSFL
Trigger: CAGGAAAGAACATAAACTCAAGAAAGGAGCAGGGTA...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAATCACTCCTAGAAACTTaGGTTGTTCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKSLLET*VVLQVQ
Trigger: CTGCACCTGGAGAACAACCAAAGTTTCTAGGAGTGA...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCTCACTCCTAGAAACTTaGGTTGTTCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSSLLET*VVLQVQ
Trigger: CTGCACCTGGAGAACAACCAAAGTTTCTAGGAGTGA...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACTCACTCCTAGAAACTTaGGTTGTTCTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNSLLET*VVLQVQ
Trigger: CTGCACCTGGAGAACAACCAAAGTTTCTAGGAGTGA...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCCAGTCAGAATCATCATaGTCACTGTCCAGACTTCCC +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFQSESS*SLSRLP
Trigger: GGGAAGTCTGGACAGTGACAATGATGATTCTGACTG...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: NDELSCFRSSLKGIERGMRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAATGCTTCAGGAGTTCTTaGAAAGGTATAGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKCFRSS*KGIERG
Trigger: GCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCA...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GAGGTCAAGGTTTGTTCTACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGTTTTGCTTGTTAGTTaGGTTAACTACTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: EVKVCSTRQRQASKHSSKVLLVS*VNYFCS
Trigger: GGAACAGAAGTAGTTAACCAAACTAACAAGCAAAAC...TTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGTAGAACAAACCTTGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTCTGCAACCACAGCCAGGACTTTCTGGTTAACAACTCTGAGCGTACTTTGTGTTTTGCTTGTTAGTTaGGTTAACTACTTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VSATTARTFWLTTLSVLCVLLVS*VNYFCS
Trigger: GGAACAGAAGTAGTTAACCAAACTAACAAGCAAAAC...ACAAAGTACGCTCAGAGTTGTTAACCAGAAAGTCCTGGCTGTGGTTGCAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATTTACTCTGTATGGGTaGGTGCATGAGCATAAAATA +
Preference number: 5 (lower is better)
Translates to: GSVRVCVLSDRIWLSKDTFTLYG*VHEHKI
Trigger: TATTTTATGCTCATGCACCAACCCATACAGAGTAAA...TGTGTCCTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACAAAATATCACTTGATTGTACCCAGCCATTTGGTGCCACTGGGCTTCATGCTCTTTACTCTGTATGGGTaGGTGCATGAGCATAAAATA +
Preference number: 5 (lower is better)
Translates to: TKYHLIVPSHLVPLGFMLFTLYG*VHEHKI
Trigger: TATTTTATGCTCATGCACCAACCCATACAGAGTAAA...GAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTACAATCAAGTGATATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGACAGGGTCTGTGCGTGTCTGTGTCTTGAGTGACAGAATTTGGTTATCAAAGTTTACTCTGTATGGGTaGGTGCATGAGCATAAAATA +
Preference number: 5 (lower is better)
Translates to: RTGSVRVCVLSDRIWLSKFTLYG*VHEHKI
Trigger: TATTTTATGCTCATGCACCAACCCATACAGAGTAAA...CTTTGATAACCAAATTCTGTCACTCAAGACACAGACACGCACAGACCCTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GCCTGGCAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCGCTACAAAATATCACTaGATTGTACCCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: AWQLQIRGRTTQNYVSCCATKYH*IVPSHL
Trigger: CAAATGGCTGGGTACAATCAAGTGATATTTTGTAGC...GCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTGCCAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAATGGCCAAAACACAACTaGACTGGTTGGCGTATTACA +
Preference number: 5 (lower is better)
Translates to: ESFISGSHIMEKGEALIKWPKHN*TGWRIT
Trigger: TGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCCA...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTGGCCAAAACACAACTaGACTGGTTGGCGTATTACA +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSWPKHN*TGWRIT
Trigger: TGTAATACGCCAACCAGTCAAGTTGTGTTTTGGCCA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCGTTCTGAACTGTATCTaGGTTCTCCACCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSVLNCI*VLHHSP
Trigger: TGGAGAGTGGTGGAGAACCAAGATACAGTTCAGAAC...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCCCCTTCTCTATTCCTTaGGTTCTGAACTGTATCTTG +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSPFSIP*VLNCIL
Trigger: CAAGATACAGTTCAGAACCAAAGGAATAGAGAAGGG...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS-3UTR CAA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAGGCGTTCAAGGAATGTaGGTGATCTTTCTCATCATC +
Preference number: 5 (lower is better)
Translates to: ESFISGSHIMEKGEALIKGVQGM*VIFLII
Trigger: GATGATGAGAAAGATCACCAACATTCCTTGAACGCC...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGACTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: FKERCTIVLIVSMQERSRLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCCAGAATAGTGAGTGGTaGACCAGCAAAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSQNSEW*TSKKAK
Trigger: TTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTG...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp CAGCTACAAATAAGAGGTAGAACTACTCAAAACTATGTTTCCTGCTGCAGGAAAGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: QLQIRGRTTQNYVSCCRKETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...TTTCCTGCAGCAGGAAACATAGTTTTGAGTAGTTCTACCTCTTATTTGTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACA +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFGFLRI*NTPSST
Trigger: TGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKGTKLQ*FPTRFP
Trigger: AGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCC...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCTACCCTGCTCCTTTCTaGAGTTTATGTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSYPAPF*SLCSFL
Trigger: CAGGAAAGAACATAAACTCAAGAAAGGAGCAGGGTA...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCCAGTCAGAATCATCATaGTCACTGTCCAGACTTCCC +
Preference number: 5 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPQSESS*SLSRLP
Trigger: GGGAAGTCTGGACAGTGACAATGATGATTCTGACTG...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTTCTCTGTCAGAAGGTTaGCTATCGCTTAGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSSLSEG*LSLRKG
Trigger: ACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGA...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 5 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ATTGACGTGGTAATACAACCAGCATCTGTACCTAGATGCTACTATTATCAGAACTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 5 (lower is better)
Translates to: IDVVIQPASVPRCYYYQNSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...GTTCTGATAATAGTAGCATCTAGGTACAGATGCTGGTTGTATTACCACGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAGAGATTCAATGACTTaGCCCTCTGCCTACCATCAC +
Preference number: 5 (lower is better)
Translates to: MSIKYTQTELQTADNCFSRDSMT*PSAYHH
Trigger: GTGATGGTAGGCAGAGGGCAAAGTCATTGAATCTCT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCAGAGGCATTTTTGCTCTTTaGATAAGGCAGACACTTGAC +
Preference number: 5 (lower is better)
Translates to: FKERCTIVLIVSMQERSRGIFAL*IRQTLD
Trigger: GTCAAGTGTCTGCCTTATCAAAAGAGCAAAAATGCC...TCTGCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGTTCTGAACTGTATCTaGGTTCTCCACCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLVLNCI*VLHHSP
Trigger: TGGAGAGTGGTGGAGAACCAAGATACAGTTCAGAAC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTGGTCGTGCCTGTCTTTaGCTTTATAAGCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSGRACL*LYKQCH
Trigger: ATGACATTGCTTATAAAGCAAAAGACAGGCACGACC...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACA +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLGFLRI*NTPSST
Trigger: TGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: MSIKYTQTELQTADNCFSGTKLQ*FPTRFP
Trigger: AGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATTTGGCACAATTAGTTTaGGGGTGTCCACGCCTACTA +
Preference number: 5 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNLAQLV*GCPRLL
Trigger: TAGTAGGCGTGGACACCCCAAAACTAATTGTGCCAA...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACAGTCAGAATCATCATaGTCACTGTCCAGACTTCCC +
Preference number: 5 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTQSESS*SLSRLP
Trigger: GGGAAGTCTGGACAGTGACAATGATGATTCTGACTG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGAGCGCTGTATTATTaGGCCTGTGACCAAAAACTG +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRRALYY*ACDQKL
Trigger: CAGTTTTTGGTCACAGGCCAAATAATACAGCGCTCT...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCGGTGCACTATTGTCTaGATTGTGTCTATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRRCTIV*IVSMQE
Trigger: CTCTTGCATAGACACAATCAAGACAATAGTGCACCG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 5 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGGTGCGTGTCTGTGTCTaGAGTGACAGAATTTGGTTA +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRVRVCV*SDRIWL
Trigger: TAACCAAATTCTGTCACTCAAGACACAGACACGCAC...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTTCTGGAGGTCAAGGTTaGTTCTACCAGACAAAGACA +
Preference number: 5 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTSGGQG*FYQTKT
Trigger: TGTCTTTGTCTGGTAGAACAAACCTTGACCTCCAGA...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp CAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTAAAAGAGATTCAATGACTTaGCCCTCTGCCTACCATCAC +
Preference number: 5 (lower is better)
Translates to: QNHHQIWFILSQWVNSVKRDSMT*PSAYHH
Trigger: GTGATGGTAGGCAGAGGGCAAAGTCATTGAATCTCT...TTTAACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ACCAGACAAAGACAAGCCAGTAAGCACAGCTCCAAAGCTAAAGTTTTAAGTTCCAACCTCAGGTTTTGCTaGTTAGTTTGGTTAACTACT +
Preference number: 5 (lower is better)
Translates to: TRQRQASKHSSKAKVLSSNLRFC*LVWLTT
Trigger: AGTAGTTAACCAAACTAACAAGCAAAACCTGAGGTT...GGAACTTAAAACTTTAGCTTTGGAGCTGTGCTTACTGGCTTGTCTTTGTCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TACTGCCCCTGGCACACAAAACAATTAGAATTCCAAGTATTCATTTCACACAGTGGCATTTTTGCTCTTTaGATAAGGCAGACACTTGAC +
Preference number: 5 (lower is better)
Translates to: YCPWHTKQLEFQVFISHSGIFAL*IRQTLD
Trigger: GTCAAGTGTCTGCCTTATCAAAAGAGCAAAAATGCC...ACTGTGTGAAATGAATACTTGGAATTCTAATTGTTTTGTGTGCCAGGGGCAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AATGATGAGTTAAGTTGCTTCAGGAGTTCTTTGAAAGGTATAGAGAGGGGCATGGCTACAAAATATCACTaGATTGTACCCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: NDELSCFRSSLKGIERGMATKYH*IVPSHL
Trigger: CAAATGGCTGGGTACAATCAAGTGATATTTTGTAGC...CATGCCCCTCTCTATACCTTTCAAAGAACTCCTGAAGCAACTTAACTCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GAATCCTTTATCTCCGGAAGTCACATCATGGAGAAGGGAGAAGCACTTATAAAAACACAACTTGACTGGTaGGCGTATTACACAACTTTT +
Preference number: 5 (lower is better)
Translates to: ESFISGSHIMEKGEALIKTQLDW*AYYTTF
Trigger: AAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTGT...TTTTATAAGTGCTTCTCCCTTCTCCATGATGTGACTTCCGGAGATAAAGGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAACACAACTTGACTGGTaGGCGTATTACACAACTTTT +
Preference number: 5 (lower is better)
Translates to: HESTVTLYSAALQSHYILTQLDW*AYYTTF
Trigger: AAAAGTTGTGTAATACGCCAACCAGTCAAGTTGTGT...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTAGACTTTAGCCCTGAGTaGCAATGTTTGCCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLDFSPE*QCLPRK
Trigger: TTTCCTAGGCAAACATTGCAACTCAGGGCTAAAGTC...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTTTTAAGGAACGGTGCACTATTGTCTTGATTGTGTCTATGCAAGAGAGAAGCGGCATGGGTATAAACTaGAGTTTATGTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: VFKERCTIVLIVSMQERSGMGIN*SLCSFL
Trigger: CAGGAAAGAACATAAACTCAAGTTTATACCCATGCC...GCTTCTCTCTTGCATAGACACAATCAAGACAATAGTGCACCGTTCCTTAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351898.10
CDS GCA 90 bp GGTGATCTTTCTCTGTCAGAAGGTTTGCTATCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATTGGAATTTTAATACTTGGAACTTTT +
Preference number: 5 (lower is better)
Translates to: GDLSLSEGLLSLRKG*CSMMSIGILILGTF
Trigger: AAAAGTTCCAAGTATTAAAATTCCAATGGACATCATGGAACAGCAACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGAAAGATCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp ATATGTGGTTTGGGTTTTATGAAAACTGGCATAAGAGATTCAATGACTTTGCCCCAGAATAGTGAGTGGTaGACCAGCAAAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ICGLGFMKTGIRDSMTLPQNSEW*TSKKAK
Trigger: TTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTG...GGGCAAAGTCATTGAATCTCTTATGCCAGTTTTCATAAAACCCAAACCACATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGAGGACTCAGAATAGTGAGTGGTaGACCAGCAAAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: FKFYSNLRHNFYWSSRRTQNSEW*TSKKAK
Trigger: TTTTGCCTTTTTGCTGGTCAACCACTCACTATTCTG...AGTCCTCCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp CTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAATGAAACGTGTGAAGTATaGAACCAAGAAGCTGGCATC +
Preference number: 5 (lower is better)
Translates to: LLAYPRDCVFVCVCMCKNETCEV*NQEAGI
Trigger: GATGCCAGCTTCTTGGTTCAATACTTCACACGTTTC...ATTTTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACA +
Preference number: 5 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVGFLRI*NTPSST
Trigger: TGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACC...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTATACCCTGCTCCTTTCTaGAGTTTATGTTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLYPAPF*SLCSFL
Trigger: CAGGAAAGAACATAAACTCAAGAAAGGAGCAGGGTA...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AACACCAGTATACAGTTGATAAAAGATTTACTCTGTATGGGTTGGTGCATGAGCTTTTGCCTTCTAACATaGCACATATATACACCAGCC +
Preference number: 5 (lower is better)
Translates to: NTSIQLIKDLLCMGWCMSFCLLT*HIYTPA
Trigger: GGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAA...GCTCATGCACCAACCCATACAGAGTAAATCTTTTATCAACTGTATACTGGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGCCTACCATCACTCTTTaGCCTTCTAACATTGCACAT +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRPTITL*PSNIAH
Trigger: ATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGG...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp TTTGTGTCCAGTTTGCATAGAAACAAAACCACCACCAAATCTGGTTCATTCTTACCTACCATCACTCTTTaGCCTTCTAACATTGCACAT +
Preference number: 5 (lower is better)
Translates to: FVSSLHRNKTTTKSGSFLPTITL*PSNIAH
Trigger: ATGTGCAATGTTAGAAGGCAAAAGAGTGATGGTAGG...TAAGAATGAACCAGATTTGGTGGTGGTTTTGTTTCTATGCAAACTGGACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp CATGAGAGTACTGTTACACTGTACTCTGCAGCTCTGCAATCCCATTACATTTTAAACCTCAGGTTTTGCTaGTTAGTTTGGTTAACTACT +
Preference number: 5 (lower is better)
Translates to: HESTVTLYSAALQSHYILNLRFC*LVWLTT
Trigger: AGTAGTTAACCAAACTAACAAGCAAAACCTGAGGTT...TAAAATGTAATGGGATTGCAGAGCTGCAGAGTACAGTGTAACAGTACTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCGGTAAACCTCAGGTTTaGCTTGTTAGTTTGGTTAAC +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFGKPQV*LVSLVN
Trigger: GTTAACCAAACTAACAAGCAAAACCTGAGGTTTACC...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCCCTGAGTTGCAATGTTaGCCTAGGAAACAGAATTCT +
Preference number: 5 (lower is better)
Translates to: MSIKYTQTELQTADNCFSPELQC*PRKQNS
Trigger: AGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGG...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCGTACACATGAATTCCTaGCAAATCCCACAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLVHMNS*QIPQFE
Trigger: CTCAAACTGTGGGATTTGCAAGGAATTCATGTGTAC...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACTACCATTATCAGGGTaGGTAAACATCCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTLPLSG*VNILLA
Trigger: TGCAAGTAGGATGTTTACCAACCCTGATAATGGTAG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS-3UTR CAA 90 bp AAACAAAACCACCACCAAATCTGGTTCATTCTTAGTCAATGGGTAAATTCAGTTTTTGGACTTGTTGGCTaGAACTCACTTGGCACAATT +
Preference number: 5 (lower is better)
Translates to: KQNHHQIWFILSQWVNSVFGLVG*NSLGTI
Trigger: AATTGTGCCAAGTGAGTTCAAGCCAACAAGTCCAAA...AACTGAATTTACCCATTGACTAAGAATGAACCAGATTTGGTGGTGGTTTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp TGCCTTCTGGCTTACCCTAGAGATTGTGTATTTGTGTGTGTATGTATGTGTAAAAACTCTGAGCGTACTTaGTCTTTATCTTTTGAATCC +
Preference number: 5 (lower is better)
Translates to: CLLAYPRDCVFVCVCMCKNSERT*SLSFES
Trigger: GGATTCAAAAGATAAAGACAAAGTACGCTCAGAGTT...TTTACACATACATACACACACAAATACACAATCTCTAGGGTAAGCCAGAAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp AGGTTACAATGTAGTTTCTGTTCCCTTGCTCCTCCAGAAATAATCATTGTCTTCAACTCTGAGCGTACTTaGTCTTTATCTTTTGAATCC +
Preference number: 5 (lower is better)
Translates to: RLQCSFCSLAPPEIIIVFNSERT*SLSFES
Trigger: GGATTCAAAAGATAAAGACAAAGTACGCTCAGAGTT...GAAGACAATGATTATTTCTGGAGGAGCAAGGGAACAGAAACTACATTGTAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000340595.4
CDS-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCGCTACAAAATATCACTaGATTGTACCCAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: MSIKYTQTELQTADNCFSATKYH*IVPSHL
Trigger: CAAATGGCTGGGTACAATCAAGTGATATTTTGTAGC...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACACCTGAGTTGCAATGTTaGCCTAGGAAACAGAATTCT +
Preference number: 5 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTPELQC*PRKQNS
Trigger: AGAATTCTGTTTCCTAGGCAAACATTGCAACTCAGG...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp GTTAATTTCAAAATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCTACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: VNFKILSWLCSHSRAPGLYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...GAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATTTTGAAATTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512686.5
CDS-3UTR CAA 90 bp TTCAGGTTCAAGTTCTATTCTAATTTGAGGCACAACTTTTACTGGAGTTCTAGGTACATATTCTTTCTTTaGTCAGAGGATGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: FRFKFYSNLRHNFYWSSRYIFFL*SEDGRL
Trigger: GAGTCTTCCATCCTCTGACAAAAGAAAGAATATGTA...CCTAGAACTCCAGTAAAAGTTGTGCCTCAAATTAGAATAGAACTTGAACCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS-3UTR CAA 90 bp GTCTTGAGTGACAGAATTTGGTTATCAAAGGACACATCTGAAAGTTTAAGAACATTTTGCCTTCTAACATaGCACATATATACACCAGCC +
Preference number: 5 (lower is better)
Translates to: VLSDRIWLSKDTSESLRTFCLLT*HIYTPA
Trigger: GGCTGGTGTATATATGTGCAATGTTAGAAGGCAAAA...TGTTCTTAAACTTTCAGATGTGTCCTTTGATAACCAAATTCTGTCACTCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS-3UTR CAA 90 bp ATGAGCATAAAATACACGCAAACTGAATTACAGACAGCAGACAACTGTTTTTCCAACTCTGAGCGTACTTaGTCTTTATCTTTTGAATCC +
Preference number: 5 (lower is better)
Translates to: MSIKYTQTELQTADNCFSNSERT*SLSFES
Trigger: GGATTCAAAAGATAAAGACAAAGTACGCTCAGAGTT...GGAAAAACAGTTGTCTGCTGTCTGTAATTCAGTTTGCGTGTATTTTATGCTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
CDS GCA 72 bp CCGTCGCTCCTCCAGTTTGGCGGCGGAGTGTGGGGCTaGAGCGGCCACTGCCACTGCCGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PSLLQFGGGVWG*SGHCHCRRRRR
Trigger: GCGGCGGCGGCGGCGGCAGTGGCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGACGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264485.11
ENST00000425175.5
CDS CCA 72 bp TCCTCCTGGGGTCTGGCTTCCGTCGCTCCTCCAGTTTaGCGGCGGAGTGTGGGGCTGCAGCGGCCACTGCCA +
Preference number: 6 (lower is better)
Translates to: SSWGLASVAPPV*RRSVGLQRPLP
Trigger: TGGCAGTGGCCGCTGCAGCCCCACACTCCGCCGCCAAACTGGAGGAGCGACGGAAGCCAGACCCCAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264485.11
ENST00000351898.10
ENST00000425175.5
CDS GCA 72 bp GCAGGGCAGAGTCACTCTTCTTCTGGTGTCTGCTACTaGTTCACGCAGCTCCTCTCATCTGGTGCTCGAGAA +
Preference number: 6 (lower is better)
Translates to: AGQSHSSSGVCY*FTQLLSSGARE
Trigger: TTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAGTGACTCTGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS CCA 72 bp AGCAAGGCACACCCACCAGGGGTTTTCTCCAAACGGTaGAACGAACCAACCTCGGTTTGGACTTGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: SKAHPPGVFSKR*NEPTSVWTCWL
Trigger: AAGCCAACAAGTCCAAACCGAGGTTGGTTCGTTCCACCGTTTGGAGAAAACCCCTGGTGGGTGTGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CCA 72 bp TGGTGTCTGCTACTGCTTCACGCAGCTCCTCTCATCTaGTGCTCGAGAATATGCCGGTCCCACATAGCTTCA +
Preference number: 6 (lower is better)
Translates to: WCLLLLHAAPLI*CSRICRSHIAS
Trigger: TGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS GCA 72 bp TGTCTGCTACTGCTTCACGCAGCTCCTCTCATCTGGTaGTCGAGAATATGCCGGTCCCACATAGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: CLLLLHAAPLIW*SRICRSHIASV
Trigger: AACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS GCA 72 bp ATGTTAGCAGGGCAGAGTCACTCTTCTTCTGGTGTCTaGTACTGCTTCACGCAGCTCCTCTCATCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: MLAGQSHSSSGV*YCFTQLLSSGA
Trigger: AGCACCAGATGAGAGGAGCTGCGTGAAGCAGTAGCAGACACCAGAAGAAGAGTGACTCTGCCCTGCTAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS GCA 72 bp ACAGGAACTTCAGTCAGGGCACCCAGCATGACAGCCTaGTGTAGCCTAACAAAGGCAATGAAAGGAGTATCC +
Preference number: 6 (lower is better)
Translates to: TGTSVRAPSMTA*CSLTKAMKGVS
Trigger: GGATACTCCTTTCATTGCCTTTGTTAGGCTACAGCAGGCTGTCATGCTGGGTGCCCTGACTGAAGTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS GCA 72 bp CTTCACGCAGCTCCTCTCATCTGGTGCTCGAGAATATaGCGGTCCCACATAGCTTCAGTTCTAACCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LHAAPLIWCSRI*RSHIASVLTLR
Trigger: TCTCAAGGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCAGATGAGAGGAGCTGCGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS TCA 72 bp GATGTGTCACAAAGAACCTTTAGCCCTCAGATGAGCTaGGGTCTAACCACTCACTTCCCCTCCTTCTCCACT +
Preference number: 6 (lower is better)
Translates to: DVSQRTFSPQMS*GLTTHFPSFST
Trigger: AGTGGAGAAGGAGGGGAAGTGAGTGGTTAGACCTCAGCTCATCTGAGGGCTAAAGGTTCTTTGTGACACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340595.4
CDS CCA 72 bp GGTCCTTCTCCGGTTTATCAGAAATGTCATTCAGACTaGAGGAAGTCAGATTCCTATGGGTCATGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GPSPVYQKCHSD*RKSDSYGSWLG
Trigger: GCCCAGCCATGACCCATAGGAATCTGACTTCCTCCAGTCTGAATGACATTTCTGATAAACCGGAGAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS CCA 72 bp ATAAACACAAAGCGTAATGCCCTCACCTGGGTCAGGTaGCACACAGGTACAGGAAAAGAGAGTGTTGTAGCC +
Preference number: 6 (lower is better)
Translates to: INTKRNALTWVR*HTGTGKESVVA
Trigger: GGCTACAACACTCTCTTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAGGGCATTACGCTTTGTGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS CCA 72 bp AAAGCGAGCATAAACACAAAGCGTAATGCCCTCACCTaGGTCAGGTGGCACACAGGTACAGGAAAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: KASINTKRNALT*VRWHTGTGKES
Trigger: ACTCTCTTTTCCTGTACCTGTGTGCCACCTGACCCAGGTGAGGGCATTACGCTTTGTGTTTATGCTCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS CCA 72 bp TTCATCCTCCATCCAAGAGAGGAAGTTTGGTGTGTCTaGAGTGCTCGTGATGATCGTTTGTGGAAATCCAGC +
Preference number: 6 (lower is better)
Translates to: FILHPREEVWCV*SARDDRLWKSS
Trigger: GCTGGATTTCCACAAACGATCATCACGAGCACTCCAGACACACCAAACTTCCTCTCTTGGATGGAGGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638464.1
CDS CAA 72 bp AAGCCCTTCTCTATTCCTTTGGTTCTGAACTGTATCTaGGTTCTCCACCACTCTCCAGAAGGACAGCACTCC +
Preference number: 6 (lower is better)
Translates to: KPFSIPLVLNCI*VLHHSPEGQHS
Trigger: GGAGTGCTGTCCTTCTGGAGAGTGGTGGAGAACCAAGATACAGTTCAGAACCAAAGGAATAGAGAAGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340595.4
ENST00000512686.5
CDS CAA 90 bp TGGTGCTCGAGAATATGCCGGTCCCACATAGCTTCAGTTCTAACCTaGAGAGGGCACCCACATAGACAGGTAAGAGAAAATAATCCCAAT +
Preference number: 6 (lower is better)
Translates to: WCSRICRSHIASVLT*RGHPHRQVRENNPN
Trigger: ATTGGGATTATTTTCTCTTACCTGTCTATGTGGGTGCCCTCTCAAGGTTAGAACTGAAGCTATGTGGGACCGGCATATTCTCGAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639096.1
CDS TCA 72 bp GGTCGTGCTGGGAGAAGAGGTAGTCCATGCCTTTTCTaGCAGCTACAAGTGCCAAGATCATTACTGGAAAAA +
Preference number: 6 (lower is better)
Translates to: GRAGRRGSPCLF*QLQVPRSLLEK
Trigger: TTTTTCCAGTAATGATCTTGGCACTTGTAGCTGTCAGAAAAGGCATGGACTACCTCTTCTCCCAGCACGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CCA 72 bp GAAATGTCATTCAGACTGGAGGAAGTCAGATTCCTATaGGTCATGGCTGGGCTACCATTATCAGGGTTGGTA +
Preference number: 6 (lower is better)
Translates to: EMSFRLEEVRFL*VMAGLPLSGLV
Trigger: TACCAACCCTGATAATGGTAGCCCAGCCATGACCCATAGGAATCTGACTTCCTCCAGTCTGAATGACATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS CAA 90 bp AAGAAATCAAAGCCCTTCTCTATTCCTTTGGTTCTGAACTGTATCTaGGTTCTCCACCACTCTCCAGAAGGACAGCACTCCAATTCTGTG +
Preference number: 6 (lower is better)
Translates to: KKSKPFSIPLVLNCI*VLHHSPEGQHSNSV
Trigger: CACAGAATTGGAGTGCTGTCCTTCTGGAGAGTGGTGGAGAACCAAGATACAGTTCAGAACCAAAGGAATAGAGAAGGGCTTTGATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340595.4
ENST00000512686.5
CDS TCA 72 bp TCCTTAAGTTCAGGTTTCAATAGGCCTGTCTCAATCTaGTGGTCAACAATCATCTCCACCAACTGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: SLSSGFNRPVSI*WSTIISTNCGR
Trigger: TCTCCCACAGTTGGTGGAGATGATTGTTGACCATCAGATTGAGACAGGCCTATTGAAACCTGAACTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS TCA 72 bp ATTACAGTTGTTCCCGACGAGGTTTCCTCCGTATTTTaGACACTCCTTCTTCGACAAAAATGCCCAGTCAAA +
Preference number: 6 (lower is better)
Translates to: ITVVPDEVSSVF*TLLLRQKCPVK
Trigger: TTTGACTGGGCATTTTTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACCTCGTCGGGAACAACTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS TCA 72 bp CATGGGTATAAACTTCAAGATGGGAGCCATAAAGACTaGCAGACCAGTCAGAATAAACACAAGGGTTCCAGT +
Preference number: 6 (lower is better)
Translates to: HGYKLQDGSHKD*QTSQNKHKGSS
Trigger: ACTGGAACCCTTGTGTTTATTCTGACTGGTCTGTCAGTCTTTATGGCTCCCATCTTGAAGTTTATACCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000425175.5
ENST00000649996.1
CDS GCA 72 bp CTCATCAATACCAGCAATCAGGTCGTGCCTGTCTTTTaGTTTATAAGCAATGTCATGGAACACCTCATCAGA +
Preference number: 6 (lower is better)
Translates to: LINTSNQVVPVF*FISNVMEHLIR
Trigger: TCTGATGAGGTGTTCCATGACATTGCTTATAAAGCAAAAGACAGGCACGACCTGATTGCTGGTATTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000512686.5
ENST00000514331.1
ENST00000649996.1
CDS CCA 72 bp GGTAGTATTATGGTACATGTCAGTAGAAGACATAGTTaGCAAATACTCTGGGGCCAGTGTGGTGTCATTAGA +
Preference number: 6 (lower is better)
Translates to: GSIMVHVSRRHS*QILWGQCGVIR
Trigger: TCTAATGACACCACACTGGCCCCAGAGTATTTGCCAACTATGTCTTCTACTGACATGTACCATAATACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CAA 72 bp AATTACAGTTGTTCCCGACGAGGTTTCCTCCGTATTTaGAACACTCCTTCTTCGACAAAAATGCCCAGTCAA +
Preference number: 6 (lower is better)
Translates to: NYSCSRRGFLRI*NTPSSTKMPSQ
Trigger: TTGACTGGGCATTTTTGTCGAAGAAGGAGTGTTCAAAATACGGAGGAAACCTCGTCGGGAACAACTGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CAA 90 bp GAGTTGGTTATGTTCACATTCCAGAGCTCCTGGTCTCCTTCCTGGTaGAATCATACAGCTAAAATACCTCAGGCAATGAGACATCAAATT +
Preference number: 6 (lower is better)
Translates to: ELVMFTFQSSWSPSW*NHTAKIPQAMRHQI
Trigger: AATTTGATGTCTCATTGCCTGAGGTATTTTAGCTGTATGATTCAACCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1
CDS TCA 72 bp TTTTACTGGAGTTCTAGGAGGACTTGGCATACCGAGTaGCTGAAGGAAAGGAATTTTATCAGCATGATGTGT +
Preference number: 6 (lower is better)
Translates to: FYWSSRRTWHTE*LKERNFISMMC
Trigger: ACACATCATGCTGATAAAATTCCTTTCCTTCAGTCACTCGGTATGCCAAGTCCTCCTAGAACTCCAGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS CAA 72 bp AATTTTATCAGCATGATGTGTGGCGTTCAAGGAATGTaGGTGATCTTTCTCTGTCAGAAGGTTTGCTATCGC +
Preference number: 6 (lower is better)
Translates to: NFISMMCGVQGM*VIFLCQKVCYR
Trigger: GCGATAGCAAACCTTCTGACAGAGAAAGATCACCAACATTCCTTGAACGCCACACATCATGCTGATAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS CAA 72 bp AAAGACATGAGTGTGATATCAGGAACAAAATTACAGTaGTTCCCGACGAGGTTTCCTCCGTATTTTGAACAC +
Preference number: 6 (lower is better)
Translates to: KDMSVISGTKLQ*FPTRFPPYFEH
Trigger: GTGTTCAAAATACGGAGGAAACCTCGTCGGGAACAACTGTAATTTTGTTCCTGATATCACACTCATGTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000425175.5
ENST00000649996.1
CDS GCA 72 bp TCTCTGTCAGAAGGTTTGCTATCGCTTAGGAAAGGTTaGTGTTCCATGATGTCCATTGGAATTTTAATACTT +
Preference number: 6 (lower is better)
Translates to: SLSEGLLSLRKG*CSMMSIGILIL
Trigger: AAGTATTAAAATTCCAATGGACATCATGGAACAGCAACCTTTCCTAAGCGATAGCAAACCTTCTGACAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264485.11
ENST00000340595.4
ENST00000351898.10
ENST00000649996.1
CDS CCA 72 bp AATATTGAGTTGGTTATGTTCACATTCCAGAGCTCCTaGTCTCCTTCCTGGTTGAATCATACAGCTAAAATA +
Preference number: 6 (lower is better)
Translates to: NIELVMFTFQSS*SPSWLNHTAKI
Trigger: TATTTTAGCTGTATGATTCAACCAGGAAGGAGACCAGGAGCTCTGGAATGTGAACATAACCAACTCAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512686.5
ENST00000514331.1