RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC4A10 (Homo sapiens)

Ensembl gene IDs: ENSG00000144290

Ensembl transcript IDs: ENST00000272716.9, ENST00000375514.9, ENST00000415876.6, ENST00000421911.1, ENST00000446228.5, ENST00000446997.6, ENST00000461456.5, ENST00000481721.1, ENST00000482861.5, ENST00000493021.5, ENST00000605990.5, ENST00000606386.1

Found 552 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAACAGGATCACAGACCAAAATAGAACATCTGGAACATATGGGTaGTCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGAT +
Preference number: 1 (lower is better)
Translates to: KNRITDQNRTSGTYG*SWPQARPTYSPCND
Trigger: ATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATGTTCCAGATGTTCTATTTTGGTCTGTGATCCTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 90 bp CAGAGGCAGAAATATTGGATTCCCTCCATTCCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCACACAGTTACACGAGTATTGTGTCA +
Preference number: 1 (lower is better)
Translates to: QRQKYWIPSIPSMCH*WDYAVPHSYTSIVS
Trigger: TGACACAATACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATATTTCTGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CCA 90 bp AGGCAGAAATATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTaGGATTATGCGGTTCCACACAGTTACACGAGTATTGTGTCAGCA +
Preference number: 1 (lower is better)
Translates to: RQKYWIPSIPSMCHC*DYAVPHSYTSIVSA
Trigger: TGCTGACACAATACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATATTTCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 90 bp CCAGTTTACAAATGTCTAACGTACAGCAAGGAACACACAGATTCTTaGATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAG +
Preference number: 1 (lower is better)
Translates to: PVYKCLTYSKEHTDS*IGYCICSQGCLTAQ
Trigger: CTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGACATTTGTAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR GCA 90 bp ACTATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGAGTAACTGTGGAAAAGAACAGGATC +
Preference number: 1 (lower is better)
Translates to: TMDRTLVGKYLLVLN*FRVADRVTVEKNRI
Trigger: GATCCTGTTCTTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CCA 90 bp CTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGAAATATTaGATTCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATGCG +
Preference number: 1 (lower is better)
Translates to: LTQLGSPKLCQRQKY*IPSIPSMCHCWDYA
Trigger: CGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATATTTCTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 90 bp ACGTACAGCAAGGAACACACAGATTCTTGCATTGGCTATTGTATCTaGTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACACAGAAAT +
Preference number: 1 (lower is better)
Translates to: TYSKEHTDSCIGYCI*SQGCLTAQKFKHRN
Trigger: ATTTCTGTGTTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR CCA 90 bp TTACAAATGTCTAACGTACAGCAAGGAACACACAGATTCTTGCATTaGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTT +
Preference number: 1 (lower is better)
Translates to: LQMSNVQQGTHRFLH*LLYLLTGMSHCSEV
Trigger: AACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGACATTTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR GCA 90 bp TCCACACAGTTACACGAGTATTGTGTCAGCAGTTCCAGATCATTATaGATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCTCC +
Preference number: 1 (lower is better)
Translates to: STQLHEYCVSSSRSL*MLIGYASLSSNNFS
Trigger: GGAGAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGAACTGCTGACACAATACTCGTGTAACTGTGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 90 bp GTATTGTGTCAGCAGTTCCAGATCATTATGCATGTTGATTGGATATaGTTCACTGAGTTCAAACAACTTCTCCAGGGCCTCATAAATGAA +
Preference number: 1 (lower is better)
Translates to: VLCQQFQIIMHVDWI*FTEFKQLLQGLINE
Trigger: TTCATTTATGAGGCCCTGGAGAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGAACTGCTGACACAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CCA 90 bp ATTAAGCAGTGCATGACCATTAGCTGCAGAGTAACTGTACAGGAGTaGAATTTCATATACAATGATTCACCATGTGGCATTCCACAAGTA +
Preference number: 1 (lower is better)
Translates to: IKQCMTISCRVTVQE*NFIYNDSPCGIPQV
Trigger: TACTTGTGGAATGCCACATGGTGAATCATTGTATATGAAATTCCACTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCACTGCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCCTTTGCTCCCGAATaGCGAGAAATTTGGGTTGTT +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPFAPE*REIWVV
Trigger: AACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGCTGTTGGTCTAACATaGGAACATGATTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFAVGLT*EHDSGP
Trigger: TGGTCCTGAATCATGTTCTCATGTTAGACCAACAGC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGCATGACCATTAGCTaGAGAGTAACTGTACAGGAG +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFCMTIS*RVTVQE
Trigger: CTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR GCA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTTATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 2 (lower is better)
Translates to: YGSNLGWKISASLELLQGYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CAA 90 bp AAAATCATAAGCCCAGTAACCCTTTGCTCCCGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCTGAGCATTCTGATTCCAGTTTTAGG +
Preference number: 2 (lower is better)
Translates to: KIISPVTLCSRMPRN*GCSPGAEHSDSSFR
Trigger: CCTAAAACTGGAATCAGAATGCTCAGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTTATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCAAGGCAACTCATCTaGATAATTGTGAAGAGATGC +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPRQLI*IIVKRC
Trigger: GCATCTCTTCACAATTATTCAGATGAGTTGCCTTGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATTGGCTATTGTATCTaGTCACAGGGATGTCTCACT +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFIGYCI*SQGCLT
Trigger: AGTGAGACATCCCTGTGAGCAGATACAATAGCCAAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR GCA 90 bp CGTAACAAACCAGCCACGATCATCTCTAGTGGGCTTGAAAACACTTGGTACTTGAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 2 (lower is better)
Translates to: RNKPATIISSGLENTWYLKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...CAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGATCGTGGCTGGTTTGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp ATATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATGCGGTTCCTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 2 (lower is better)
Translates to: ILDSLHSFNVPLLGLCGSYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...GGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CAA 90 bp TCCAGTTTACAAATGTCTAACGTACAGCAAGGAACACACAGATTCTaGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: SSLQMSNVQQGTHRF*HWLLYLLTGMSHCS
Trigger: TGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGACATTTGTAAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR CAA 90 bp CAGTTACACGAGTATTGTGTCAGCAGTTCCAGATCATTATGCATGTaGATTGGATATGCTTCACTGAGTTCAAACAACTTCTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: QLHEYCVSSSRSLCM*IGYASLSSNNFSRA
Trigger: GGCCCTGGAGAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGAACTGCTGACACAATACTCGTGTAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR TCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: AMICILTQLGSPKLCQRQVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACTCTGCATTATGTCTaGTTGTCCTTAACAAGTTGT +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTLHYV*LSLTSC
Trigger: ACAACTTGTTAAGGACAATCAGACATAATGCAGAGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAAGCCACAGGGCTCTaGATTATTATAAAACGGAAT +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKATGL*IIIKRN
Trigger: ATTCCGTTTTATAATAATTCAGAGCCCTGTGGCTTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CCA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTCAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp GTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATAAAATCAGAGAACAGTaGAAGAGCAGCCCAGATGTA +
Preference number: 2 (lower is better)
Translates to: VAVQSPMLALKDRYDSPYKIREQ*KSSPDV
Trigger: TACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTT...ATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAACATCTGTTGTCAGTaGGAGACAAACTTAGTATAT +
Preference number: 2 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFNICCQ*ETNLVY
Trigger: ATATACTAAGTTTGTCTCCCACTGACAACAGATGTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CCA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTGGATCGAACCTTGGTTaGAAAATATCTGCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSGSNLG*KISASL
Trigger: AAGACTAGCAGATATTTTCCAACCAAGGTTCGATCC...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCCTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR TCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCCTCCAGGAGAGCAGATaGGTAATGGATACTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFLQESR*VMDTSS
Trigger: ACTTGAAGTATCCATTACTCATCTGCTCTCCTGGAG...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp GTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 2 (lower is better)
Translates to: VAVQSPMLALKDRYDSPYKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...ATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR TCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 2 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATCTCCATGCAATGATTTaGATTCTGACACAGTTAGGT +
Preference number: 2 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHLHAMI*ILTQLG
Trigger: ACCTAACTGTGTCAGAATGCAAATCATTGCATGGAG...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATCCAACATACTCTCCATaGAATGATTTGCATTCTGAC +
Preference number: 2 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHPTYSP*NDLHSD
Trigger: GTCAGAATGCAAATCATTGCATGGAGAGTATGTTGG...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGAACACACAGATTCTTaGATTGGCTATTGTATCTGC +
Preference number: 2 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTEHTDS*IGYCIC
Trigger: GCAGATACAATAGCCAATGCAAGAATCTGTGTGTTC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR GCA 72 bp TCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATaGGGTTCCACACAGTTACACGAGTATTGTGTCAGC +
Preference number: 3 (lower is better)
Translates to: SLHSFNVPLLGL*GSTQLHEYCVS
Trigger: GCTGACACAATACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR TCA 72 bp ATCACAGACCAAAATAGAACATCTGGAACATATGGGTaGTCATGGCCACAGGCCCGTCCAACATACTCTCCA +
Preference number: 3 (lower is better)
Translates to: ITDQNRTSGTYG*SWPQARPTYSP
Trigger: TGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATGTTCCAGATGTTCTATTTTGGTCTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACACAGATTCTTGCATaGGCTATTGTATCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTQILA*AIVSAH
Trigger: GTGAGCAGATACAATAGCCAATGCAAGAATCTGTGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGGAACACACAGATTCTaGCATTGGCTATTGTATCTG +
Preference number: 3 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFGTHRF*HWLLYL
Trigger: CAGATACAATAGCCAATGCAAGAATCTGTGTGTTCC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR CCA 72 bp TCTAACGTACAGCAAGGAACACACAGATTCTTGCATTaGCTATTGTATCTGCTCACAGGGATGTCTCACTGC +
Preference number: 3 (lower is better)
Translates to: SNVQQGTHRFLH*LLYLLTGMSHC
Trigger: GCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCGGCTTTCAATGCTTaGGGGAATCAGCTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSAFNA*GNQLLE
Trigger: CTCTAGAAGCTGATTCCCCAAAGCATTGAAAGCCGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CAA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCTCGGCTTTCAATGCTTaGGGGAATCAGCTTCTAGAG +
Preference number: 3 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSSAFNA*GNQLLE
Trigger: CTCTAGAAGCTGATTCCCCAAAGCATTGAAAGCCGA...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR TCA 72 bp CGAAGCGGTACGTGCCTTAGGTATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAGAAGAGCTTTATCCTA +
Preference number: 3 (lower is better)
Translates to: RSGTCLRYIKSG*CFAGIQKSFIL
Trigger: TAGGATAAAGCTCTTCTGGATGCCGGCAAAACATCAACCAGATTTTATATACCTAAGGCACGTACCGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 72 bp AAATATTGGATTCCCTCCATTCCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCACACAGTTACACGAGT +
Preference number: 3 (lower is better)
Translates to: KYWIPSIPSMCH*WDYAVPHSYTS
Trigger: ACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR CCA 72 bp TATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTaGGATTATGCGGTTCCACACAGTTACACGAGTATT +
Preference number: 3 (lower is better)
Translates to: YWIPSIPSMCHC*DYAVPHSYTSI
Trigger: AATACTCGTGTAACTGTGTGGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR CAA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTCAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 3 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR-3UTR CAA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTACAGTTACACGAGTATaGTGTCAGCAGTTCCAGATC +
Preference number: 3 (lower is better)
Translates to: YGSNLGWKISASLELLQGTVTRV*CQQFQI
Trigger: GATCTGGAACTGCTGACACAATACTCGTGTAACTGT...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR TCA 72 bp AAAATATCTGCTAGTCTTGAACTGCTTCAGGGTGGCTaGCAGAGTAACTGTGGAAAAGAACAGGATCACAGA +
Preference number: 3 (lower is better)
Translates to: KISASLELLQGG*QSNCGKEQDHR
Trigger: TCTGTGATCCTGTTCTTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAGATATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 72 bp AAATGTCTAACGTACAGCAAGGAACACACAGATTCTTaGATTGGCTATTGTATCTGCTCACAGGGATGTCTC +
Preference number: 3 (lower is better)
Translates to: KCLTYSKEHTDS*IGYCICSQGCL
Trigger: GAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR GCA 72 bp TTCAGGACCAGCATTAAGCAGTGCATGACCATTAGCTaGAGAGTAACTGTACAGGAGTGGAATTTCATATAC +
Preference number: 3 (lower is better)
Translates to: FRTSIKQCMTIS*RVTVQEWNFIY
Trigger: GTATATGAAATTCCACTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCACTGCTTAATGCTGGTCCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR-3UTR CAA 90 bp CCAGCTGAGTTCCCGCTTCGTGAACAACAAGTCCATCAACTTTCTTACAAATACGTATATAAAATCTGGTaGATGTTTTGCCGGCATCCA +
Preference number: 3 (lower is better)
Translates to: PAEFPLREQQVHQLSYKYVYKIW*MFCRHP
Trigger: TGGATGCCGGCAAAACATCAACCAGATTTTATATAC...GTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
3UTR GCA 72 bp AAGGAACACACAGATTCTTGCATTGGCTATTGTATCTaGTCACAGGGATGTCTCACTGCTCAGAAGTTTAAA +
Preference number: 3 (lower is better)
Translates to: KEHTDSCIGYCI*SQGCLTAQKFK
Trigger: TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR CCA 72 bp TGCATGACCATTAGCTGCAGAGTAACTGTACAGGAGTaGAATTTCATATACAATGATTCACCATGTGGCATT +
Preference number: 3 (lower is better)
Translates to: CMTISCRVTVQE*NFIYNDSPCGI
Trigger: AATGCCACATGGTGAATCATTGTATATGAAATTCCACTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
3UTR GCA 72 bp TTACACGAGTATTGTGTCAGCAGTTCCAGATCATTATaGATGTTGATTGGATATGCTTCACTGAGTTCAAAC +
Preference number: 3 (lower is better)
Translates to: LHEYCVSSSRSL*MLIGYASLSSN
Trigger: GTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGAACTGCTGACACAATACTCGTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCCTCCGTGGGGCTCTaGTTCCCCATGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSSVGL*FPMSCC
Trigger: ACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCCTCCGTGGGGCTCTaGTTCCCCATGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSSVGL*FPMSCC
Trigger: ACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATCTCATGGTACTGTTaGCCCTTTCCCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFISWYC*PFPRGP
Trigger: GGGACCCCTGGGAAAGGGTCAACAGTACCATGAGAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATCTCATGGTACTGTTaGCCCTTTCCCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLISWYC*PFPRGP
Trigger: GGGACCCCTGGGAAAGGGTCAACAGTACCATGAGAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGGCTCTGCTTCCCCATaGGCTGCTGTTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLGSASP*AAVPFG
Trigger: ACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGCCCGGCACTCGCTCTaGTTAGTATTCGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFARHSL*LVFGSG
Trigger: ACCTGATCCGAATACTAAGCAGAGCGAGTGCCGGGC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGCCCGGCACTCGCTCTaGTTAGTATTCGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLARHSL*LVFGSG
Trigger: ACCTGATCCGAATACTAAGCAGAGCGAGTGCCGGGC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCTCACCAGAGTCACATaGCTCCTACTCACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLLTRVT*LLLTRA
Trigger: AGCCCGAGTGAGTAGGAGCCATGTGACTCTGGTGAG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375514.9
ENST00000415876.6
3UTR CAA 72 bp AGCCCAGTAACCCTTTGCTCCCGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCTGAGCATTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: SPVTLCSRMPRN*GCSPGAEHSDS
Trigger: GGAATCAGAATGCTCAGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp CATACACCGAGCATGACAGCCACCATTAATAGGTCCAGATGGTACCCACAACCTCAGCTGGAGACAACCTaGCAAACGCAACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: HTPSMTATINRSRWYPQPQLETT*QTQLLF
Trigger: GAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTG...AGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp CGTAACAAACCAGCCACGATCATCTCTAGTGGGCTTGAAAACACTTGGTACTTGATCTCATGGTACTGTTaGCCCTTTCCCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RNKPATIISSGLENTWYLISWYC*PFPRGP
Trigger: GGGACCCCTGGGAAAGGGTCAACAGTACCATGAGAT...CAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGATCGTGGCTGGTTTGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGGCTCTGCTTCCCCATaGGCTGCTGTTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQGSASP*AAVPFG
Trigger: ACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCTGGAACATATGGGTaGTCATGGCCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSGTYG*SWPQAR
Trigger: ACGGGCCTGTGGCCATGATCACCCATATGTTCCAGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGCTGCTTCAGGGTGGCTaGCAGAGTAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQLLQGG*QSNCGK
Trigger: TTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAG...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCACATGGACTAGTATaGCCCTTTTGTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPHGLV*PFCWPP
Trigger: GGGAGGCCAACAAAAGGGGCATACTAGTCCATGTGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAGCAGCGGCTCCATTTaGGCTCCCTGGTCTTTAATC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSSGSI*APWSLI
Trigger: GATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCAGCTGGAGACAACCTaGCAAACGCAACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFQLETT*QTQLLF
Trigger: GAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTGGCTCTGCTTCCCCATaGGCTGCTGTTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSGSASP*AAVPFG
Trigger: ACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCC...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTGCTTCAGGGTGGCTaGCAGAGTAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLLQGG*QSNCGK
Trigger: TTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAGCCCAGTAACCCTTTaGTCCCGAATGCCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSPVTL*SRMPRN
Trigger: ATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAGCCCAGTAACCCTTTaGTCCCGAATGCCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSPVTL*SRMPRN
Trigger: ATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGAAGCAGGAGGCAATTaGACACTCCAACTCACCAGA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLEAGGN*TLQLTR
Trigger: TCTGGTGAGTTGGAGTGTGCAATTGCCTCCTGCTTC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375514.9
ENST00000415876.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGAAGCAGGAGGCAATTaGACACTCCAACTCACCAGA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFEAGGN*TLQLTR
Trigger: TCTGGTGAGTTGGAGTGTGCAATTGCCTCCTGCTTC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375514.9
ENST00000415876.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCACATGGACTAGTATaGCCCTTTTGTTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPHGLV*PFCWPP
Trigger: GGGAGGCCAACAAAAGGGGCATACTAGTCCATGTGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCAAACTTCAACCACCTaGCTGTTTCTCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLQTSTT*LFLATQ
Trigger: CTGAGTGGCGAGAAACAGCCAGGTGGTTGAAGTTTG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCAAACTTCAACCACCTaGCTGTTTCTCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFQTSTT*LFLATQ
Trigger: CTGAGTGGCGAGAAACAGCCAGGTGGTTGAAGTTTG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCAAACTTCAACCACCTaGCTGTTTCTCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSQTSTT*LFLATQ
Trigger: CTGAGTGGCGAGAAACAGCCAGGTGGTTGAAGTTTG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGCCTCATGGACCCTATaGCGTACATCTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSASWTL*RTSSFS
Trigger: GCTGAATGAAGATGTACGCCATAGGGTCCATGAGGC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGCCTCATGGACCCTATaGCGTACATCTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFASWTL*RTSSFS
Trigger: GCTGAATGAAGATGTACGCCATAGGGTCCATGAGGC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGCTCTATTCGAATGCTTaGATCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQLYSNA*IPFSRR
Trigger: CCTCCTGGAGAATGGGATCCAAGCATTCGAATAGAG...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTAAACATCTGGAACATATaGGTGATCATGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLNIWNI*VIMATG
Trigger: GCCTGTGGCCATGATCACCCATATGTTCCAGATGTT...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATAGTGCCCTTCCAATaGGAGTTGTACTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFIVPFQ*ELYCAL
Trigger: GAGGGCACAGTACAACTCCCATTGGAAGGGCACTAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSFIQLT*AHLLVK
Trigger: CTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLFIQLT*AHLLVK
Trigger: CTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSTSSFS*PELTCW
Trigger: CCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTSSFS*PELTCW
Trigger: CCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCAGCTGGAGACAACCTaGCAAACGCAACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQQLETT*QTQLLF
Trigger: GAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCTGGAACATATGGGTaGTCATGGCCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSGTYG*SWPQAR
Trigger: ACGGGCCTGTGGCCATGATCACCCATATGTTCCAGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGTCTGGAACATATGGGTaGTCATGGCCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: AMICILTQLGSPKLCQRQSGTYG*SWPQAR
Trigger: ACGGGCCTGTGGCCATGATCACCCATATGTTCCAGA...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTGCTTCAGGGTGGCTaGCAGAGTAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQLLQGG*QSNCGK
Trigger: TTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAGCATACACCGAGCATaGCAGCCACCATTAATAGGT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSIHRA*QPPLIG
Trigger: ACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAGCATACACCGAGCATaGCAGCCACCATTAATAGGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSIHRA*QPPLIG
Trigger: ACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTATTTAGGCTATTGACATaGGTGATGGAGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLFRLLT*VMERTV
Trigger: CACAGTCCTCTCCATCACTCATGTCAATAGCCTAAA...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp CATATGGGTGATCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGATTCTCCAGGAGAGCAGATaGGTAATGGATACTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HMGDHGHRPVQHTLHAMILQESR*VMDTSS
Trigger: ACTTGAAGTATCCATTACTCATCTGCTCTCCTGGAG...AATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATGCTGTTTCATCAATaGCTCATGGACCCTATGGCG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLMLFHQ*LMDPMA
Trigger: CGCCATAGGGTCCATGAGGCATTGATGAAACAGCAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATGCTGTTTCATCAATaGCTCATGGACCCTATGGCG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSMLFHQ*LMDPMA
Trigger: CGCCATAGGGTCCATGAGGCATTGATGAAACAGCAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTAAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCATTGCTGGGATTATaGGGTTCCACACAGTTACAC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPLLGL*GSTQLH
Trigger: GTGTAACTGTGTGGAACCGCATAATCCCAGCAATGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPSMCH*WDYAVP
Trigger: TGGAACCGCATAATCCCAGCAATGGCACATTGAAGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCCTTTGCTCCCGAATaGCGAGAAATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPFAPE*REIWVV
Trigger: AACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGCCCGGCACTCGCTCTaGTTAGTATTCGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKARHSL*LVFGSG
Trigger: ACCTGATCCGAATACTAAGCAGAGCGAGTGCCGGGC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCAAACTTCAACCACCTaGCTGTTTCTCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQQTSTT*LFLATQ
Trigger: CTGAGTGGCGAGAAACAGCCAGGTGGTTGAAGTTTG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGCCTCATGGACCCTATaGCGTACATCTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQASWTL*RTSSFS
Trigger: GCTGAATGAAGATGTACGCCATAGGGTCCATGAGGC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAATCTGGTTGGGATTaGGACTTCAGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKSGWD*DFSQSL
Trigger: CAAGGACTGGCTGAAGTCCCAATCCCAACCAGATTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAATCTGGTTGGGATTaGGACTTCAGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSKSGWD*DFSQSL
Trigger: CAAGGACTGGCTGAAGTCCCAATCCCAACCAGATTT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTCTATTCGAATGCTTaGATCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLYSNA*IPFSRR
Trigger: CCTCCTGGAGAATGGGATCCAAGCATTCGAATAGAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTCTATTCGAATGCTTaGATCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSLYSNA*IPFSRR
Trigger: CCTCCTGGAGAATGGGATCCAAGCATTCGAATAGAG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp CATATGGGTGATCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGATTAGCTGCTGTTCCATTTaGTACAGCAGGAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: HMGDHGHRPVQHTLHAMISCCSI*YSRNLP
Trigger: AGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCT...AATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATCCTTCCAGTTCGCTaGAGTTCAGGTCCACTATGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFILPVR*SSGPLC
Trigger: ACATAGTGGACCTGAACTCCAGCGAACTGGAAGGAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATCCTTCCAGTTCGCTaGAGTTCAGGTCCACTATGT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSILPVR*SSGPLC
Trigger: ACATAGTGGACCTGAACTCCAGCGAACTGGAAGGAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCAATGTGCCATTGCTaGGATTATGCGGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSMCHC*DYAVPH
Trigger: GTGTGGAACCGCATAATCCCAGCAATGGCACATTGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAACATCTGGAACATATaGGTGATCATGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLNIWNI*VIMATG
Trigger: GCCTGTGGCCATGATCACCCATATGTTCCAGATGTT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACTCACCAGAGTCACATaGCTCCTACTCACTCGGGCT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKLTRVT*LLLTRA
Trigger: AGCCCGAGTGAGTAGGAGCCATGTGACTCTGGTGAG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375514.9
ENST00000415876.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCTCTCTTGCTGGTGTaGAGGTCCTTTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSLLLV*RSFFMP
Trigger: AGGCATGAAAAAGGACCTCCACACCAGCAAGAGAGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCTGTGAAAAGGTCATaGGGAATGTGTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSVKRS*GMCSSS
Trigger: TGACGAGGAACACATTCCTCATGACCTTTTCACAGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTGTGAAAAGGTCATaGGGAATGTGTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSVKRS*GMCSSS
Trigger: TGACGAGGAACACATTCCTCATGACCTTTTCACAGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGTGAAAAGGTCATaGGGAATGTGTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSVKRS*GMCSSS
Trigger: TGACGAGGAACACATTCCTCATGACCTTTTCACAGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGCATACACCGAGCATaGCAGCCACCATTAATAGGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSIHRA*QPPLIG
Trigger: ACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTAGGCTATTGACATaGGTGATGGAGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFFRLLT*VMERTV
Trigger: CACAGTCCTCTCCATCACTCATGTCAATAGCCTAAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CATACACCGAGCATGACAGCCACCATTAATAGGTCCAGATGGTACCCACAACCTCCAAGGCAACTCATCTaGATAATTGTGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: HTPSMTATINRSRWYPQPPRQLI*IIVKRC
Trigger: GCATCTCTTCACAATTATTCAGATGAGTTGCCTTGG...AGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGAATCAGCTTCTAGAGTaGTTAGGAAGGGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQNQLLE*LGRGAF
Trigger: AAAAGCTCCCCTTCCTAATCACTCTAGAAGCTGATT...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTCTAAAGTGTTGGCATaGATGTCCAGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQSKVLA*MSSNTV
Trigger: AACTGTGTTGCTGGACATGCATGCCAACACTTTAGA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp ATATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATGCGGTTCCATGCTGTTTCATCAATaGCTCATGGACCCTATGGCG +
Preference number: 4 (lower is better)
Translates to: ILDSLHSFNVPLLGLCGSMLFHQ*LMDPMA
Trigger: CGCCATAGGGTCCATGAGGCATTGATGAAACAGCAT...GGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATTCCTCCGTGGGGCTCTaGTTCCCCATGAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHSSVGL*FPMSCC
Trigger: ACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGA...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CATACACCGAGCATGACAGCCACCATTAATAGGTCCAGATGGTACCCACAACCTTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: HTPSMTATINRSRWYPQPYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...AGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCATTGCTGGGATTATaGGGTTCCACACAGTTACAC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPLLGL*GSTQLH
Trigger: GTGTAACTGTGTGGAACCGCATAATCCCAGCAATGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPSMCH*WDYAVP
Trigger: TGGAACCGCATAATCCCAGCAATGGCACATTGAAGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCCTTTGCTCCCGAATaGCGAGAAATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPFAPE*REIWVV
Trigger: AACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp CGTAACAAACCAGCCACGATCATCTCTAGTGGGCTTGAAAACACTTGGTACTTGCCCTTTGCTCCCGAATaGCGAGAAATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: RNKPATIISSGLENTWYLPFAPE*REIWVV
Trigger: AACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGG...CAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGATCGTGGCTGGTTTGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATCTGGTTGATGTTTTaGCGGCATCCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSIWLMF*RHPEEL
Trigger: AAGCTCTTCTGGATGCCGGCAAAACATCAACCAGAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTGCATGACCATTAGCTaGAGAGTAACTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLCMTIS*RVTVQE
Trigger: CTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTGCATGACCATTAGCTaGAGAGTAACTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSCMTIS*RVTVQE
Trigger: CTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQSIWAP*SLISMF
Trigger: AAACATGGAGATTAAAGACCAGGGAGCCCAAATGGA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCCTGAGCTCACTTGTTaGTCAAGAACCATATCTGCA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSPELTC*SRTISA
Trigger: TGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCTGAGCTCACTTGTTaGTCAAGAACCATATCTGCA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPELTC*SRTISA
Trigger: TGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCTGAGCTCACTTGTTaGTCAAGAACCATATCTGCA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPELTC*SRTISA
Trigger: TGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCATCAATGCCTCATaGACCCTATGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFFINAS*TLWRTS
Trigger: AGATGTACGCCATAGGGTCCATGAGGCATTGATGAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTCATCAATGCCTCATaGACCCTATGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLFINAS*TLWRTS
Trigger: AGATGTACGCCATAGGGTCCATGAGGCATTGATGAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATTTTCAACACAGGCTaGAGCAGACTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLIFNTG*SRLRRN
Trigger: GTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTGAAGCAATACAGCTaGAGACAACCTGACAAACGC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLLKQYS*RQPDKR
Trigger: GCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTGAAGCAATACAGCTaGAGACAACCTGACAAACGC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSLKQYS*RQPDKR
Trigger: GCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAATCTGGTTGGGATTaGGACTTCAGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKSGWD*DFSQSL
Trigger: CAAGGACTGGCTGAAGTCCCAATCCCAACCAGATTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGAACAAAAATCTGGTTaGGATTGGGACTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLEQKSG*DWDFSQ
Trigger: CTGGCTGAAGTCCCAATCCCAACCAGATTTTTGTTC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGAACAAAAATCTGGTTaGGATTGGGACTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSEQKSG*DWDFSQ
Trigger: CTGGCTGAAGTCCCAATCCCAACCAGATTTTTGTTC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAGCTGCTGTTCCATTTaGTACAGCAGGAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSCCSI*YSRNLP
Trigger: AGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATCCTTCCAGTTCGCTaGAGTTCAGGTCCACTATGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQILPVR*SSGPLC
Trigger: ACATAGTGGACCTGAACTCCAGCGAACTGGAAGGAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCAATGTGCCATTGCTaGGATTATGCGGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSMCHC*DYAVPH
Trigger: GTGTGGAACCGCATAATCCCAGCAATGGCACATTGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAACATCTGGAACATATaGGTGATCATGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQNIWNI*VIMATG
Trigger: GCCTGTGGCCATGATCACCCATATGTTCCAGATGTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGGAAGGGGAGCTTTTaGAAGGAAAGCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQRKGSF*KESLTP
Trigger: AGGAGTCAAGCTTTCCTTCCAAAAGCTCCCCTTCCT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CATATGGGTGATCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGATTCATGGAATTTGGTTCTaGCTGTTTCTTGCCAATATC +
Preference number: 4 (lower is better)
Translates to: HMGDHGHRPVQHTLHAMIHGIWF*LFLANI
Trigger: GATATTGGCAAGAAACAGTCAGAACCAAATTCCATG...AATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACAGCTGGAGACAACCTaGCAAACGCAACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKQLETT*QTQLLF
Trigger: GAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CCAGCTGAGTTCCCGCTTCGTGAACAACAAGTCCATCAACTTTCTTACAAATACCTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PAEFPLREQQVHQLSYKYLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...GTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTTAGGCTATTGACATaGGTGATGGAGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQFRLLT*VMERTV
Trigger: CACAGTCCTCTCCATCACTCATGTCAATAGCCTAAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAATCAGCTTCTAGAGTaGTTAGGAAGGGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFNQLLE*LGRGAF
Trigger: AAAAGCTCCCCTTCCTAATCACTCTAGAAGCTGATT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CATACACCGAGCATGACAGCCACCATTAATAGGTCCAGATGGTACCCACAACCTAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 4 (lower is better)
Translates to: HTPSMTATINRSRWYPQPKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...AGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGCTGTTGGTCTAACATaGGAACATGATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQAVGLT*EHDSGP
Trigger: TGGTCCTGAATCATGTTCTCATGTTAGACCAACAGC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAAGTGTTGGCATaGATGTCCAGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSKVLA*MSSNTV
Trigger: AACTGTGTTGCTGGACATGCATGCCAACACTTTAGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATCTGGTTGATGTTTTaGCGGCATCCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQIWLMF*RHPEEL
Trigger: AAGCTCTTCTGGATGCCGGCAAAACATCAACCAGAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp CATATGGGTGATCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGATTATAATTGTGAAGAGATaGACTTTTCGAAGCGGTACG +
Preference number: 4 (lower is better)
Translates to: HMGDHGHRPVQHTLHAMIIIVKR*TFRSGT
Trigger: CGTACCGCTTCGAAAAGTGCATCTCTTCACAATTAT...AATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCACAGGTTCCAGACTaGATGACCTTTCTATTTCCA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSQVPD*MTFLFP
Trigger: TGGAAATAGAAAGGTCATGCAGTCTGGAACCTGTGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375514.9
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATTGGCTATTGTATCTaGTCACAGGGATGTCTCACT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLIGYCI*SQGCLT
Trigger: AGTGAGACATCCCTGTGAGCAGATACAATAGCCAAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTGCATGACCATTAGCTaGAGAGTAACTGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQCMTIS*RVTVQE
Trigger: CTCCTGTACAGTTACTCTGCAGCTAATGGTCATGCA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAAACACTAAGAGGCTaGTTTGGGGAATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKTLRG*FGESLA
Trigger: AGCCAGTGATTCCCCAAAGCAGCCTCTTAGTGTTTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGGAGGTCCTTTTTCATaGCTTTGTTTCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLGGPFS*LCFIPH
Trigger: ATGTGGGATGAAACAAAGGCATGAAAAAGGACCTCC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSIWAP*SLISMF
Trigger: AAACATGGAGATTAAAGACCAGGGAGCCCAAATGGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTATTTCTTCTAAAGTGTTaGCATGCATGTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLFLLKC*HACPAT
Trigger: TGTTGCTGGACATGCATGCCAACACTTTAGAAGAAA...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCTGAGCTCACTTGTTaGTCAAGAACCATATCTGCA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPELTC*SRTISA
Trigger: TGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATGCCTCATGGACCCTATaGCGTACATCTTCATTCAGC +
Preference number: 4 (lower is better)
Translates to: VAVQSPMLALKDRYDSPYASWTL*RTSSFS
Trigger: GCTGAATGAAGATGTACGCCATAGGGTCCATGAGGC...ATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTCATCAATGCCTCATaGACCCTATGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQFINAS*TLWRTS
Trigger: AGATGTACGCCATAGGGTCCATGAGGCATTGATGAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATTTTCAACACAGGCTaGAGCAGACTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQIFNTG*SRLRRN
Trigger: GTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTGAAGCAATACAGCTaGAGACAACCTGACAAACGC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQLKQYS*RQPDKR
Trigger: GCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATCTTCCTCTTCTCCTaGGAAGGAACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFIFLFS*EGTFLG
Trigger: TCCCAAAAATGTTCCTTCCCAGGAGAAGAGGAAGAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATCTTCCTCTTCTCCTaGGAAGGAACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLIFLFS*EGTFLG
Trigger: TCCCAAAAATGTTCCTTCCCAGGAGAAGAGGAAGAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATCTTCCTCTTCTCCTaGGAAGGAACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSIFLFS*EGTFLG
Trigger: TCCCAAAAATGTTCCTTCCCAGGAGAAGAGGAAGAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGCTGCTGTTCCATTTaGTACAGCAGGAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSCCSI*YSRNLP
Trigger: AGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGATAGTGCCCTTCCAATaGGAGTTGTACTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: AMICILTQLGSPKLCQRQIVPFQ*ELYCAL
Trigger: GAGGGCACAGTACAACTCCCATTGGAAGGGCACTAT...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAATAGTGCCCTTCCAATaGGAGTTGTACTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKIVPFQ*ELYCAL
Trigger: GAGGGCACAGTACAACTCCCATTGGAAGGGCACTAT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTAGGAAGGGGAGCTTTTaGAAGGAAAGCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSRKGSF*KESLTP
Trigger: AGGAGTCAAGCTTTCCTTCCAAAAGCTCCCCTTCCT...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGTTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: AMICILTQLGSPKLCQRQFIQLT*AHLLVK
Trigger: CTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAA...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKFIQLT*AHLLVK
Trigger: CTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AMICILTQLGSPKLCQRQTSSFS*PELTCW
Trigger: CCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGT...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCATGGAATTTGGTTCTaGCTGTTTCTTGCCAATATC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSHGIWF*LFLANI
Trigger: GATATTGGCAAGAAACAGTCAGAACCAAATTCCATG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCATGGAATTTGGTTCTaGCTGTTTCTTGCCAATATC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFHGIWF*LFLANI
Trigger: GATATTGGCAAGAAACAGTCAGAACCAAATTCCATG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGGCTCTGCTTCCCCATaGGCTGCTGTTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGGSASP*AAVPFG
Trigger: ACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTCTGGAACATATGGGTaGTCATGGCCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGSGTYG*SWPQAR
Trigger: ACGGGCCTGTGGCCATGATCACCCATATGTTCCAGA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFYIKSG*CFAGIQ
Trigger: CTGGATGCCGGCAAAACATCAACCAGATTTTATATA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLYIKSG*CFAGIQ
Trigger: CTGGATGCCGGCAAAACATCAACCAGATTTTATATA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCAAGGCAACTCATCTaGATAATTGTGAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPRQLI*IIVKRC
Trigger: GCATCTCTTCACAATTATTCAGATGAGTTGCCTTGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAATCAGCTTCTAGAGTaGTTAGGAAGGGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQNQLLE*LGRGAF
Trigger: AAAAGCTCCCCTTCCTAATCACTCTAGAAGCTGATT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAACATGAGAACATaGTTCAGGACCAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSNMRT*FRTSIK
Trigger: CTTAATGCTGGTCCTGAATCATGTTCTCATGTTAGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTAACATGAGAACATaGTTCAGGACCAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSNMRT*FRTSIK
Trigger: CTTAATGCTGGTCCTGAATCATGTTCTCATGTTAGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACCTCTATCCACAACTaGTTCTTCATCATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTSIHN*FFIISR
Trigger: ACGAGAAATGATGAAGAAGCAGTTGTGGATAGAGGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTACCTCTATCCACAACTaGTTCTTCATCATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLTSIHN*FFIISR
Trigger: ACGAGAAATGATGAAGAAGCAGTTGTGGATAGAGGT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACCATTGCTGGGATTATaGGGTTCCACACAGTTACAC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKPLLGL*GSTQLH
Trigger: GTGTAACTGTGTGGAACCGCATAATCCCAGCAATGG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKPSMCH*WDYAVP
Trigger: TGGAACCGCATAATCCCAGCAATGGCACATTGAAGG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTCCATGCAATGATTTaGATTCTGACACAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSLHAMI*ILTQLG
Trigger: ACCTAACTGTGTCAGAATGCAAATCATTGCATGGAG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTCCATGCAATGATTTaGATTCTGACACAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLHAMI*ILTQLG
Trigger: ACCTAACTGTGTCAGAATGCAAATCATTGCATGGAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCAACATACTCTCCATaGAATGATTTGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPTYSP*NDLHSD
Trigger: GTCAGAATGCAAATCATTGCATGGAGAGTATGTTGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCAACATACTCTCCATaGAATGATTTGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPTYSP*NDLHSD
Trigger: GTCAGAATGCAAATCATTGCATGGAGAGTATGTTGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACCCTTTGCTCCCGAATaGCGAGAAATTTGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKPFAPE*REIWVV
Trigger: AACAACCCAAATTTCTCGGCATTCGGGAGCAAAGGG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CCAGCTGAGTTCCCGCTTCGTGAACAACAAGTCCATCAACTTTCTTACAAATACATCTGGTTGATGTTTTaGCGGCATCCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAEFPLREQQVHQLSYKYIWLMF*RHPEEL
Trigger: AAGCTCTTCTGGATGCCGGCAAAACATCAACCAGAT...GTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATAATTGTGAAGAGATaGACTTTTCGAAGCGGTACG +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSIIVKR*TFRSGT
Trigger: CGTACCGCTTCGAAAAGTGCATCTCTTCACAATTAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATAATTGTGAAGAGATaGACTTTTCGAAGCGGTACG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLIIVKR*TFRSGT
Trigger: CGTACCGCTTCGAAAAGTGCATCTCTTCACAATTAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATAATTGTGAAGAGATaGACTTTTCGAAGCGGTACG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFIIVKR*TFRSGT
Trigger: CGTACCGCTTCGAAAAGTGCATCTCTTCACAATTAT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGAACACACAGATTCTTaGATTGGCTATTGTATCTGC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSEHTDS*IGYCIC
Trigger: GCAGATACAATAGCCAATGCAAGAATCTGTGTGTTC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGGAGGTCCTTTTTCATaGCTTTGTTTCATCCCACAT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQGGPFS*LCFIPH
Trigger: ATGTGGGATGAAACAAAGGCATGAAAAAGGACCTCC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTCTTCTAAAGTGTTaGCATGCATGTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFFLLKC*HACPAT
Trigger: TGTTGCTGGACATGCATGCCAACACTTTAGAAGAAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCGATGCTTCAGCACCTaGAGGAATCTTTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSRCFST*RNLFHK
Trigger: TTTATGAAAAAGATTCCTCCAGGTGCTGAAGCATCG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATCTTCCTCTTCTCCTaGGAAGGAACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQIFLFS*EGTFLG
Trigger: TCCCAAAAATGTTCCTTCCCAGGAGAAGAGGAAGAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGGATCGAACCTTGGTTaGAAAATATCTGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFGSNLG*KISASL
Trigger: AAGACTAGCAGATATTTTCCAACCAAGGTTCGATCC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGGATCGAACCTTGGTTaGAAAATATCTGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSGSNLG*KISASL
Trigger: AAGACTAGCAGATATTTTCCAACCAAGGTTCGATCC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGAGATGGGATCCCAATaGCATAGTCAATTAAAACCA +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSEMGSQ*HSQLKP
Trigger: TGGTTTTAATTGACTATGCCATTGGGATCCCATCTC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGAGATGGGATCCCAATaGCATAGTCAATTAAAACCA +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFEMGSQ*HSQLKP
Trigger: TGGTTTTAATTGACTATGCCATTGGGATCCCATCTC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGAGATGGGATCCCAATaGCATAGTCAATTAAAACCA +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLEMGSQ*HSQLKP
Trigger: TGGTTTTAATTGACTATGCCATTGGGATCCCATCTC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTGTTTCATCCCACATaGACTAGTATGCCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQLFHPT*TSMPLL
Trigger: CAAAAGGGGCATACTAGTCCATGTGGGATGAAACAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCTCTCTTGCTGGTGTaGAGGTCCTTTTTCATGCCT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSLLLV*RSFFMP
Trigger: AGGCATGAAAAAGGACCTCCACACCAGCAAGAGAGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446997.6
CDS-3UTR CCA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCTCTGTGGAAGAACTCTaGAGAAGCGAAGATACCGGA +
Preference number: 4 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSSVEEL*RSEDTG
Trigger: TCCGGTATCTTCGCTTCTCCAGAGTTCTTCCACAGA...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCTGTGAAAAGGTCATaGGGAATGTGTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSVKRS*GMCSSS
Trigger: TGACGAGGAACACATTCCTCATGACCTTTTCACAGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAATCTCATGGTACTGTTaGCCCTTTCCCAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTISWYC*PFPRGP
Trigger: GGGACCCCTGGGAAAGGGTCAACAGTACCATGAGAT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAACTCATCAATTCCTaGTACCAAGTCATTACGATC +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSKLINS*YQVITI
Trigger: GATCGTAATGACTTGGTATCAGGAATTGATGAGTTT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAAACTCATCAATTCCTaGTACCAAGTCATTACGATC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLKLINS*YQVITI
Trigger: GATCGTAATGACTTGGTATCAGGAATTGATGAGTTT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGGCTCTGCTTCCCCATaGGCTGCTGTTCCATTTGGT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTGSASP*AAVPFG
Trigger: ACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATCTGGAACATATGGGTaGTCATGGCCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTSGTYG*SWPQAR
Trigger: ACGGGCCTGTGGCCATGATCACCCATATGTTCCAGA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCACAAGGCAGTCTTTaGCATTTCATCAGATATATT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPQGSL*HFIRYI
Trigger: AATATATCTGATGAAATGTCAAAGACTGCCTTGTGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YGSNLGWKISASLELLQGVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGAATTTCATATACAATaGTTCACCATGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLEFHIQ*FTMWHS
Trigger: GGAATGCCACATGGTGAATCATTGTATATGAAATTC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCTAACATGAGAACATaGTTCAGGACCAGCATTAAG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSNMRT*FRTSIK
Trigger: CTTAATGCTGGTCCTGAATCATGTTCTCATGTTAGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATTCTTTGCAAAATTATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SPMLALKDRYDSPYSLQNYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...ATTTTGCAAAGAATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCAACATACTCTCCATaGAATGATTTGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPTYSP*NDLHSD
Trigger: GTCAGAATGCAAATCATTGCATGGAGAGTATGTTGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCCTTTCTTTAGCTTATaGTCTTTCCTGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLPFFSL*SFLLMM
Trigger: CATCATCAACAGGAAAGAGCATAAGCTAAAGAAAGG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCTTTCTTTAGCTTATaGTCTTTCCTGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPFFSL*SFLLMM
Trigger: CATCATCAACAGGAAAGAGCATAAGCTAAAGAAAGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTTCGAAGCGGTACGTaGCTTAGGTATATAAAATCT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSFRSGT*LRYIKS
Trigger: AGATTTTATATACCTAAGGCACGTACCGCTTCGAAA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTTCGAAGCGGTACGTaGCTTAGGTATATAAAATCT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLFRSGT*LRYIKS
Trigger: AGATTTTATATACCTAAGGCACGTACCGCTTCGAAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGACCTCTATCCACAACTaGTTCTTCATCATTTCTCTG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQTSIHN*FFIISL
Trigger: CAGAGAAATGATGAAGAAGCAGTTGTGGATAGAGGT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375514.9
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCACTTTTCATGTaGACTTCCAACAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSSLFM*TSNRVH
Trigger: ATGTACTCTGTTGGAAGTGCACATGAAAAGTGAAGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGTTCATCAATGCCTCATaGACCCTATGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: AMICILTQLGSPKLCQRQFINAS*TLWRTS
Trigger: AGATGTACGCCATAGGGTCCATGAGGCATTGATGAA...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTGCATTTTTGTCCATaGAATTTGGTTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLHFCP*NLVLTV
Trigger: AACAGTCAGAACCAAATTCCATGGACAAAAATGCAG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAATTTTCAACACAGGCTaGAGCAGACTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKIFNTG*SRLRRN
Trigger: GTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAAT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp GTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATATTTTCAACACAGGCTaGAGCAGACTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VAVQSPMLALKDRYDSPYIFNTG*SRLRRN
Trigger: GTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAAT...ATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCGATGCTTCAGCACCTaGAGGAATCTTTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQRCFST*RNLFHK
Trigger: TTTATGAAAAAGATTCCTCCAGGTGCTGAAGCATCG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTGAACAAAAATCTGGTTaGGATTGGGACTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YGSNLGWKISASLELLQGEQKSG*DWDFSQ
Trigger: CTGGCTGAAGTCCCAATCCCAACCAGATTTTTGTTC...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAAGCTGCTGTTCCATTTaGTACAGCAGGAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSCCSI*YSRNLP
Trigger: AGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGGATCGAACCTTGGTTaGAAAATATCTGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQGSNLG*KISASL
Trigger: AAGACTAGCAGATATTTTCCAACCAAGGTTCGATCC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAGTACAAAGCAGAGCTaGAATTATAGCAGCTATTAC +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSTKQS*NYSSYY
Trigger: GTAATAGCTGCTATAATTCCAGCTCTGCTTTGTACT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTATTAATAGGTCCAGATaGTACCCACAACCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLINRSR*YPQPFF
Trigger: AAAGAAAGGTTGTGGGTACCATCTGGACCTATTAAT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATTAATAGGTCCAGATaGTACCCACAACCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSINRSR*YPQPFF
Trigger: AAAGAAAGGTTGTGGGTACCATCTGGACCTATTAAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATATTGATCACAGATaGATCATCTCTATAGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFYIDHR*IISIVP
Trigger: GGGCACTATAGAGATGATCCATCTGTGATCAATATA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
3UTR CAA 72 bp CAAATGTCTAACGTACAGCAAGGAACACACAGATTCTaGCATTGGCTATTGTATCTGCTCACAGGGATGTCT +
Preference number: 4 (lower is better)
Translates to: QMSNVQQGTHRF*HWLLYLLTGMS
Trigger: AGACATCCCTGTGAGCAGATACAATAGCCAATGCAAGAATCTGTGTGTTCCTTGCTGTACGTTAGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCAGCTGGAGACAACCTaGCAAACGCAACTACTGTTC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGQLETT*QTQLLF
Trigger: GAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCACAAGGCAGTCTTTaGCATTTCATCAGATATATT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPQGSL*HFIRYI
Trigger: AATATATCTGATGAAATGTCAAAGACTGCCTTGTGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAAGGTTCCAGACTGCATaGCCTTTCTATTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKRFQTA*PFYFQK
Trigger: TTTCTGGAAATAGAAAGGTCATGCAGTCTGGAACCT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375514.9
CDS-3UTR TCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAAGCCACAGGGCTCTaGATTATTATAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKATGL*IIIKRN
Trigger: ATTCCGTTTTATAATAATTCAGAGCCCTGTGGCTTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCTAAAGTGTTGGCATaGATGTCCAGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSKVLA*MSSNTV
Trigger: AACTGTGTTGCTGGACATGCATGCCAACACTTTAGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATATACGCCCTTCAGTTaGTTCTCCCAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTYTPFS*FSQQSS
Trigger: GGAGGACTGCTGGGAGAAGCAACTGAAGGGCGTATA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAGTTCCAGATCATTATaGATGTTGATTGGATATGCT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSSRSL*MLIGYA
Trigger: AGCATATCCAATCAACATGCATAATGATCTGGAACT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCCTGCTAGTCTTGAACTaGTTCAGGGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFLLVLN*FRVADR
Trigger: TCTGTCAGCCACCCTGAAGCAGTTCAAGACTAGCAG...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCTTTCTTTAGCTTATaGTCTTTCCTGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPFFSL*SFLLMM
Trigger: CATCATCAACAGGAAAGAGCATAAGCTAAAGAAAGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATAGCCCAGTAACCCTTTaGTCCCGAATGCCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHSPVTL*SRMPRN
Trigger: ATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCT...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTTCGAAGCGGTACGTaGCTTAGGTATATAAAATCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQFRSGT*LRYIKS
Trigger: AGATTTTATATACCTAAGGCACGTACCGCTTCGAAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGAAACCCCTAAAGACTaGATTTCCTGTCTTACAAAA +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQETPKD*ISCLTK
Trigger: TTTTGTAAGACAGGAAATGCAGTCTTTAGGGGTTTC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375514.9
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSIWAP*SLISMF
Trigger: AAACATGGAGATTAAAGACCAGGGAGCCCAAATGGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATTCTTTGCAAAATCAAACTTCAACCACCTaGCTGTTTCTCGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: SPMLALKDRYDSPYSLQNQTSTT*LFLATQ
Trigger: CTGAGTGGCGAGAAACAGCCAGGTGGTTGAAGTTTG...ATTTTGCAAAGAATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGTACAAAGCAGAGCTaGAATTATAGCAGCTATTAC +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSTKQS*NYSSYY
Trigger: GTAATAGCTGCTATAATTCCAGCTCTGCTTTGTACT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATTAATAGGTCCAGATaGTACCCACAACCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQINRSR*YPQPFF
Trigger: AAAGAAAGGTTGTGGGTACCATCTGGACCTATTAAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGATAGTGCCCTTCCAATaGGAGTTGTACTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGIVPFQ*ELYCAL
Trigger: GAGGGCACAGTACAACTCCCATTGGAAGGGCACTAT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCAAAGGCAACACATTTaGAACAGAAAGTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLQRQHI*NRKFLY
Trigger: ATACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATGACCTTCCAGTTCGCTaGAGTTCAGGTCCACTATGT +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHDLPVR*SSGPLC
Trigger: ACATAGTGGACCTGAACTCCAGCGAACTGGAAGGTC...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFIQLT*AHLLVK
Trigger: CTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGTSSFS*PELTCW
Trigger: CCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACATGGAATTTGGTTCTaGCTGTTTCTTGCCAATATC +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKHGIWF*LFLANI
Trigger: GATATTGGCAAGAAACAGTCAGAACCAAATTCCATG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCTGTGGCCACAAGTATaGTACATAGAGTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLWPQV*YIELQS
Trigger: GGACTGCAACTCTATGTATCATACTTGTGGCCACAG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACTGCTTCAGGGTGGCTaGCAGAGTAACTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTLLQGG*QSNCGK
Trigger: TTTTCCACAGTTACTCTGTCAGCCACCCTGAAGCAG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCAGCATACACCGAGCATaGCAGCCACCATTAATAGGT +
Preference number: 4 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFSIHRA*QPPLIG
Trigger: ACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCT...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAGCATACACCGAGCATaGCAGCCACCATTAATAGGT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGSIHRA*QPPLIG
Trigger: ACCTATTAATGGTGGCTGTCATGCTCGGTGTATGCT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTTATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: YGSNLGWKISASLELLQGYIKSG*CFAGIQ
Trigger: CTGGATGCCGGCAAAACATCAACCAGATTTTATATA...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGATGCTGTTTCATCAATaGCTCATGGACCCTATGGCG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGMLFHQ*LMDPMA
Trigger: CGCCATAGGGTCCATGAGGCATTGATGAAACAGCAT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGTTCCAGATCATTATaGATGTTGATTGGATATGCT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSSRSL*MLIGYA
Trigger: AGCATATCCAATCAACATGCATAATGATCTGGAACT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCCTTCAATGTGCCATTaGTGGGATTATGCGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGPSMCH*WDYAVP
Trigger: TGGAACCGCATAATCCCAGCAATGGCACATTGAAGG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAGCCCAGTAACCCTTTaGTCCCGAATGCCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTSPVTL*SRMPRN
Trigger: ATTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATTTCTTCTAAAGTGTTaGCATGCATGTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKFLLKC*HACPAT
Trigger: TGTTGCTGGACATGCATGCCAACACTTTAGAAGAAA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACGATGCTTCAGCACCTaGAGGAATCTTTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKRCFST*RNLFHK
Trigger: TTTATGAAAAAGATTCCTCCAGGTGCTGAAGCATCG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATAAATCTGGTTGGGATTaGGACTTCAGCCAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHKSGWD*DFSQSL
Trigger: CAAGGACTGGCTGAAGTCCCAATCCCAACCAGATTT...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCTCTATTCGAATGCTTaGATCCCATTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLYSNA*IPFSRR
Trigger: CCTCCTGGAGAATGGGATCCAAGCATTCGAATAGAG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATTCTTTGCAAAATTCAATGTGCCATTGCTaGGATTATGCGGTTCCACAC +
Preference number: 4 (lower is better)
Translates to: SPMLALKDRYDSPYSLQNSMCHC*DYAVPH
Trigger: GTGTGGAACCGCATAATCCCAGCAATGGCACATTGA...ATTTTGCAAAGAATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAACATCTGGAACATATaGGTGATCATGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGNIWNI*VIMATG
Trigger: GCCTGTGGCCATGATCACCCATATGTTCCAGATGTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CCAGCTGAGTTCCCGCTTCGTGAACAACAAGTCCATCAACTTTCTTACAAATACTATATTGATCACAGATaGATCATCTCTATAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PAEFPLREQQVHQLSYKYYIDHR*IISIVP
Trigger: GGGCACTATAGAGATGATCCATCTGTGATCAATATA...GTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAGGAAGGGGAGCTTTTaGAAGGAAAGCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGRKGSF*KESLTP
Trigger: AGGAGTCAAGCTTTCCTTCCAAAAGCTCCCCTTCCT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAACATCTGTTGTCAGTaGGAGACAAACTTAGTATAT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQNICCQ*ETNLVY
Trigger: ATATACTAAGTTTGTCTCCCACTGACAACAGATGTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCAAAGGCAACACATTTaGAACAGAAAGTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQQRQHI*NRKFLY
Trigger: ATACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATTCTGTGAAAAGGTCATaGGGAATGTGTTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHSVKRS*GMCSSS
Trigger: TGACGAGGAACACATTCCTCATGACCTTTTCACAGA...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTTSSFS*PELTCW
Trigger: CCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCAAACTCATCAATTCCTaGTACCAAGTCATTACGATC +
Preference number: 4 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSKLINS*YQVITI
Trigger: GATCGTAATGACTTGGTATCAGGAATTGATGAGTTT...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTTAGGCTATTGACATaGGTGATGGAGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFRLLT*VMERTV
Trigger: CACAGTCCTCTCCATCACTCATGTCAATAGCCTAAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACCACAAGGCAGTCTTTaGCATTTCATCAGATATATT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKPQGSL*HFIRYI
Trigger: AATATATCTGATGAAATGTCAAAGACTGCCTTGTGG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAACTCTGCATTATGTCTaGTTGTCCTTAACAAGTTGT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKTLHYV*LSLTSC
Trigger: ACAACTTGTTAAGGACAATCAGACATAATGCAGAGT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGCTGTTGGTCTAACATaGGAACATGATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGAVGLT*EHDSGP
Trigger: TGGTCCTGAATCATGTTCTCATGTTAGACCAACAGC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAAGATGCTAAGCACTaGAGGCTGAAAGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKDAKH*RLKASL
Trigger: CAGAGATGCTTTCAGCCTGCAGTGCTTAGCATCTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGATCTGGTTGATGTTTTaGCGGCATCCAGAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGIWLMF*RHPEEL
Trigger: AAGCTCTTCTGGATGCCGGCAAAACATCAACCAGAT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCTTCACTTTTCATGTaGACTTCCAACAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSSLFM*TSNRVH
Trigger: ATGTACTCTGTTGGAAGTGCACATGAAAAGTGAAGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAAACACTAAGAGGCTaGTTTGGGGAATCACTGGCT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKTLRG*FGESLA
Trigger: AGCCAGTGATTCCCCAAAGCAGCCTCTTAGTGTTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGATTTTCAACACAGGCTaGAGCAGACTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGIFNTG*SRLRRN
Trigger: GTTTCTCCTCAGTCTGCTCCAGCCTGTGTTGAAAAT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTGAAGCAATACAGCTaGAGACAACCTGACAAACGC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLKQYS*RQPDKR
Trigger: GCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGAACAAAAATCTGGTTaGGATTGGGACTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGEQKSG*DWDFSQ
Trigger: CTGGCTGAAGTCCCAATCCCAACCAGATTTTTGTTC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAACATCTGGAACATATaGGTGATCATGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTNIWNI*VIMATG
Trigger: GCCTGTGGCCATGATCACCCATATGTTCCAGATGTT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAGGAAGGGGAGCTTTTaGAAGGAAAGCTTGACTCCT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTRKGSF*KESLTP
Trigger: AGGAGTCAAGCTTTCCTTCCAAAAGCTCCCCTTCCT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGTCAACACCTTTCCCTaGGTCAGCTTTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTVNTFP*VSFLLF
Trigger: AAAGAGAAGAAAGCTGACTCAGGGAAAGGTGTTGAC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTCTAAAGTGTTGGCATaGATGTCCAGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGSKVLA*MSSNTV
Trigger: AACTGTGTTGCTGGACATGCATGCCAACACTTTAGA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTATCCCGGTCATGGATaGTCCAAAGAGAGATTCAAT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGYPGHG*SKERFN
Trigger: ATTGAATCTCTCTTTGGAGCATCCATGACCGGGATA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAAGTTCCAGATCATTATaGATGTTGATTGGATATGCT +
Preference number: 4 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSSRSL*MLIGYA
Trigger: AGCATATCCAATCAACATGCATAATGATCTGGAACT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCAGTTCCAGATCATTATaGATGTTGATTGGATATGCT +
Preference number: 4 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSSSRSL*MLIGYA
Trigger: AGCATATCCAATCAACATGCATAATGATCTGGAACT...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGATTGGCTATTGTATCTaGTCACAGGGATGTCTCACT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGIGYCI*SQGCLT
Trigger: AGTGAGACATCCCTGTGAGCAGATACAATAGCCAAT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGSIWAP*SLISMF
Trigger: AAACATGGAGATTAAAGACCAGGGAGCCCAAATGGA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTCATCAATGCCTCATaGACCCTATGGCGTACATCT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTFINAS*TLWRTS
Trigger: AGATGTACGCCATAGGGTCCATGAGGCATTGATGAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTGAAGCAATACAGCTaGAGACAACCTGACAAACGC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTLKQYS*RQPDKR
Trigger: GCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATATCTTCCTCTTCTCCTaGGAAGGAACATTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHIFLFS*EGTFLG
Trigger: TCCCAAAAATGTTCCTTCCCAGGAGAAGAGGAAGAT...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGYIKSG*CFAGIQ
Trigger: CTGGATGCCGGCAAAACATCAACCAGATTTTATATA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAATCAGCTTCTAGAGTaGTTAGGAAGGGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTNQLLE*LGRGAF
Trigger: AAAAGCTCCCCTTCCTAATCACTCTAGAAGCTGATT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAGGTGGATTTGGGTTaGGGGACAGAATTTACAATA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKVDLG*GTEFTI
Trigger: TATTGTAAATTCTGTCCCTCAACCCAAATCCACCTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATACCTCTATCCACAACTaGTTCTTCATCATTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHTSIHN*FFIISR
Trigger: ACGAGAAATGATGAAGAAGCAGTTGTGGATAGAGGT...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATCTAAAGTGTTGGCATaGATGTCCAGCAACACAGTT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTSKVLA*MSSNTV
Trigger: AACTGTGTTGCTGGACATGCATGCCAACACTTTAGA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCTCCATGCAATGATTTaGATTCTGACACAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLHAMI*ILTQLG
Trigger: ACCTAACTGTGTCAGAATGCAAATCATTGCATGGAG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGAACACACAGATTCTTaGATTGGCTATTGTATCTGC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGEHTDS*IGYCIC
Trigger: GCAGATACAATAGCCAATGCAAGAATCTGTGTGTTC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTTCTTCTAAAGTGTTaGCATGCATGTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFLLKC*HACPAT
Trigger: TGTTGCTGGACATGCATGCCAACACTTTAGAAGAAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCGATGCTTCAGCACCTaGAGGAATCTTTTTCATAAA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGRCFST*RNLFHK
Trigger: TTTATGAAAAAGATTCCTCCAGGTGCTGAAGCATCG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCGGATCGAACCTTGGTTaGAAAATATCTGCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFGSNLG*KISASL
Trigger: AAGACTAGCAGATATTTTCCAACCAAGGTTCGATCC...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACAAAGTCACTCACTATaGATCGAACCTTGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTQSHSL*IEPWLE
Trigger: TTCCAACCAAGGTTCGATCCATAGTGAGTGACTTTG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCACAGATTCTTGCATTaGCTATTGTATCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGHRFLH*LLYLLT
Trigger: TGTGAGCAGATACAATAGCCAATGCAAGAATCTGTG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTGTTTCATCCCACATaGACTAGTATGCCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTLFHPT*TSMPLL
Trigger: CAAAAGGGGCATACTAGTCCATGTGGGATGAAACAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAACTCATCAATTCCTaGTACCAAGTCATTACGATC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKLINS*YQVITI
Trigger: GATCGTAATGACTTGGTATCAGGAATTGATGAGTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATATATAAAATCTGGTTaGTGTTTTGCCGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTYIKSG*CFAGIQ
Trigger: CTGGATGCCGGCAAAACATCAACCAGATTTTATATA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCCACAAGGCAGTCTTTaGCATTTCATCAGATATATT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGPQGSL*HFIRYI
Trigger: AATATATCTGATGAAATGTCAAAGACTGCCTTGTGG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGGAATTTCATATACAATaGTTCACCATGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGEFHIQ*FTMWHS
Trigger: GGAATGCCACATGGTGAATCATTGTATATGAAATTC...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAAGCCACAGGGCTCTaGATTATTATAAAACGGAAT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKATGL*IIIKRN
Trigger: ATTCCGTTTTATAATAATTCAGAGCCCTGTGGCTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAATTCAAACAAGCTGTaGAATGAAAGAGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGNSNKL*NERVAT
Trigger: TGTGGCTACTCTTTCATTGCACAGCTTGTTTGAATT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAAGAGAGATTCAATTaGACTTATACGCCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKERFN*TYTPFS
Trigger: ACTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCCTTTCTTTAGCTTATaGTCTTTCCTGTTGATGATG +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGPFFSL*SFLLMM
Trigger: CATCATCAACAGGAAAGAGCATAAGCTAAAGAAAGG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTTCGAAGCGGTACGTaGCTTAGGTATATAAAATCT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFRSGT*LRYIKS
Trigger: AGATTTTATATACCTAAGGCACGTACCGCTTCGAAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATTTTCGAAGCGGTACGTaGCTTAGGTATATAAAATCT +
Preference number: 4 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHFRSGT*LRYIKS
Trigger: AGATTTTATATACCTAAGGCACGTACCGCTTCGAAA...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAATAATTGTGAAGAGATaGACTTTTCGAAGCGGTACG +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTIIVKR*TFRSGT
Trigger: CGTACCGCTTCGAAAAGTGCATCTCTTCACAATTAT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTCTTCACTTTTCATGTaGACTTCCAACAGAGTACAT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGSSLFM*TSNRVH
Trigger: ATGTACTCTGTTGGAAGTGCACATGAAAAGTGAAGA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTTCTTCTAAAGTGTTaGCATGCATGTCCAGCAACA +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTFLLKC*HACPAT
Trigger: TGTTGCTGGACATGCATGCCAACACTTTAGAAGAAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCTGCATTTTTGTCCATaGAATTTGGTTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLHFCP*NLVLTV
Trigger: AACAGTCAGAACCAAATTCCATGGACAAAAATGCAG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCCATATTCTTTGCAAAATAGTACAAAGCAGAGCTaGAATTATAGCAGCTATTAC +
Preference number: 4 (lower is better)
Translates to: SPMLALKDRYDSPYSLQNSTKQS*NYSSYY
Trigger: GTAATAGCTGCTATAATTCCAGCTCTGCTTTGTACT...ATTTTGCAAAGAATATGGGCTGTCATACCTATCTTTAAGAGCTAGCATTGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTATATTGATCACAGATaGATCATCTCTATAGTGCCC +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGYIDHR*IISIVP
Trigger: GGGCACTATAGAGATGATCCATCTGTGATCAATATA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACACAGATTCTTGCATTaGCTATTGTATCTGCTCACA +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTHRFLH*LLYLLT
Trigger: TGTGAGCAGATACAATAGCCAATGCAAGAATCTGTG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAAACTCATCAATTCCTaGTACCAAGTCATTACGATC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTKLINS*YQVITI
Trigger: GATCGTAATGACTTGGTATCAGGAATTGATGAGTTT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR TCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGAATTTCATATACAATaGTTCACCATGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTEFHIQ*FTMWHS
Trigger: GGAATGCCACATGGTGAATCATTGTATATGAAATTC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR GCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAATTCAAACAAGCTGTaGAATGAAAGAGTAGCCACA +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTNSNKL*NERVAT
Trigger: TGTGGCTACTCTTTCATTGCACAGCTTGTTTGAATT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATATATTGATCACAGATaGATCATCTCTATAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTYIDHR*IISIVP
Trigger: GGGCACTATAGAGATGATCCATCTGTGATCAATATA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAACATCTGTTGTCAGTaGGAGACAAACTTAGTATAT +
Preference number: 4 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGNICCQ*ETNLVY
Trigger: ATATACTAAGTTTGTCTCCCACTGACAACAGATGTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CCA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACAAAGGCAACACATTTaGAACAGAAAGTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTQRQHI*NRKFLY
Trigger: ATACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS GCA 90 bp TTCAGGTCCACTATGTCCTCCGTGGGGCTCTGCTTCCCCATGAGCTaGTGTTCCATTTGGTACAGCAGGAATCTTCCTCTTCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: FRSTMSSVGLCFPMS*CSIWYSRNLPLLLG
Trigger: TCCCAGGAGAAGAGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGACATAGTGGACCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000493021.5
CDS GCA 90 bp CTCTGCAGTGTCTTCAGTGTCTTACACTCAGCCCGGCACTCGCTCTaGTTAGTATTCGGATCAGGTAGCTCTGAAGCAGGAGGCAATTGC +
Preference number: 5 (lower is better)
Translates to: LCSVFSVLHSARHSL*LVFGSGSSEAGGNC
Trigger: GCAATTGCCTCCTGCTTCAGAGCTACCTGATCCGAATACTAAGCAGAGCGAGTGCCGGGCTGAGTGTAAGACACTGAAGACACTGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000605990.5
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCAGCAGCGGCTCCATTaGGGCTCCCTGGTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFQQRLH*GSLVFN
Trigger: ATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGGCCTCCCAGTCCCTaGCTAAAGTCAACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFWPPSP*LKSTVL
Trigger: CAGCACTGTTGACTTTAGCAAGGGACTGGGAGGCCA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS GCA 90 bp TTAATCTCCATGTTTTGTAACGCCTCTGGAATAAGCACCTTGCTCTaGAGTGTCTTCAGTGTCTTACACTCAGCCCGGCACTCGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LISMFCNASGISTLL*SVFSVLHSARHSLC
Trigger: GCAGAGCGAGTGCCGGGCTGAGTGTAAGACACTGAAGACACTGCAGAGCAAGGTGCTTATTCCAGAGGCGTTACAAAACATGGAGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
ENST00000461456.5
ENST00000481721.1
ENST00000493021.5
ENST00000605990.5
CDS-3UTR CAA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTAGCTCTATTCGAATGCTaGGATCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLALFEC*DPILQE
Trigger: CTCCTGGAGAATGGGATCCAAGCATTCGAATAGAGC...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTCCTTCAATGTGCCATaGCTGGGATTATGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQSFNVP*LGLCGS
Trigger: GGAACCGCATAATCCCAGCAATGGCACATTGAAGGA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAAGCCCAGTAACCCTTaGCTCCCGAATGCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLKPSNP*LPNAEK
Trigger: TTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAGCCCAGTAACCCTTaGCTCCCGAATGCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKPSNP*LPNAEK
Trigger: TTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCCCTTCCAATGGGAGTaGTACTGTGCCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFPFQWE*YCALIF
Trigger: GAAGATGAGGGCACAGTACAACTCCCATTGGAAGGG...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAGTATGCCCCTTTTGTaGGCCTCCCAGTCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSMPLL*ASQSLA
Trigger: AGCAAGGGACTGGGAGGCCAACAAAAGGGGCATACT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTACTAGTATGCCCCTTTaGTTGGCCTCCCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSTSMPL*LASQSL
Trigger: AAGGGACTGGGAGGCCAACAAAAGGGGCATACTAGT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACTAGTATGCCCCTTTaGTTGGCCTCCCAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTSMPL*LASQSL
Trigger: AAGGGACTGGGAGGCCAACAAAAGGGGCATACTAGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTGACTTCAGCCAGTCCTaGAAGCAATACAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLDFSQS*KQYSWR
Trigger: TCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTC...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGACTTCAGCCAGTCCTaGAAGCAATACAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFDFSQS*KQYSWR
Trigger: TCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGCTCTATTCGAATGCTaGGATCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSALFEC*DPILQE
Trigger: CTCCTGGAGAATGGGATCCAAGCATTCGAATAGAGC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGCTCTATTCGAATGCTaGGATCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFALFEC*DPILQE
Trigger: CTCCTGGAGAATGGGATCCAAGCATTCGAATAGAGC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGAGCTGCTGTTCCATTaGGTACAGCAGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFELLFH*VQQESS
Trigger: GGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCCTTCAATGTGCCATaGCTGGGATTATGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSFNVP*LGLCGS
Trigger: GGAACCGCATAATCCCAGCAATGGCACATTGAAGGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCCTTCAATGTGCCATaGCTGGGATTATGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSFNVP*LGLCGS
Trigger: GGAACCGCATAATCCCAGCAATGGCACATTGAAGGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTTCAATGTGCCATaGCTGGGATTATGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSFNVP*LGLCGS
Trigger: GGAACCGCATAATCCCAGCAATGGCACATTGAAGGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSRMPRN*GCSPGA
Trigger: AGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCG...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAGCCCAGTAACCCTTaGCTCCCGAATGCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKPSNP*LPNAEK
Trigger: TTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CATACACCGAGCATGACAGCCACCATTAATAGGTCCAGATGGTACCCACAACCTAATCTGGTTGATGTTTaGCCGGCATCCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: HTPSMTATINRSRWYPQPNLVDV*PASRRA
Trigger: AGCTCTTCTGGATGCCGGCAAAACATCAACCAGATT...AGGTTGTGGGTACCATCTGGACCTATTAATGGTGGCTGTCATGCTCGGTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCCCTTCCAATGGGAGTaGTACTGTGCCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQPFQWE*YCALIF
Trigger: GAAGATGAGGGCACAGTACAACTCCCATTGGAAGGG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTATCGGCTTTCAATGCTTaGGGGAATCAGCTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLSAFNA*GNQLLE
Trigger: CTCTAGAAGCTGATTCCCCAAAGCATTGAAAGCCGA...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS TCA 90 bp TGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGGAGAGCAGATaGGTAATGGATACTTCAAGTCATGTCAGCAACAGAATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: CKSSPDVHQQLQESR*VMDTSSHVSNRICG
Trigger: TCCACAGATTCTGTTGCTGACATGACTTGAAGTATCCATTACTCATCTGCTCTCCTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATGCGGTTCCGACTTCAGCCAGTCCTaGAAGCAATACAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: ILDSLHSFNVPLLGLCGSDFSQS*KQYSWR
Trigger: TCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTC...GGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAAATCTGGTTGGGATaGGGACTTCAGCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSKIWLG*GLQPVL
Trigger: AAGGACTGGCTGAAGTCCCAATCCCAACCAGATTTT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTGGGAAGGAACATTTTaGGGAGGCTCTATTCGAATG +
Preference number: 5 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQWEGTF*GGSIRM
Trigger: CATTCGAATAGAGCCTCCCAAAAATGTTCCTTCCCA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGAGCTGCTGTTCCATTaGGTACAGCAGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQELLFH*VQQESS
Trigger: GGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQRMPRN*GCSPGA
Trigger: AGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTAATCTGGTTGATGTTTaGCCGGCATCCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLNLVDV*PASRRA
Trigger: AGCTCTTCTGGATGCCGGCAAAACATCAACCAGATT...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCGGCTTTCAATGCTTaGGGGAATCAGCTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSAFNA*GNQLLE
Trigger: CTCTAGAAGCTGATTCCCCAAAGCATTGAAAGCCGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGGCTTTCAATGCTTaGGGGAATCAGCTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSAFNA*GNQLLE
Trigger: CTCTAGAAGCTGATTCCCCAAAGCATTGAAAGCCGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATGGCCTCCCAGTCCCTaGCTAAAGTCAACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKWPPSP*LKSTVL
Trigger: CAGCACTGTTGACTTTAGCAAGGGACTGGGAGGCCA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCTGGAATAAGCACCTaGCTCTGCAGTGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSGIST*LCSVFS
Trigger: ACTGAAGACACTGCAGAGCAAGGTGCTTATTCCAGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAAAATCTGGTTGGGATaGGGACTTCAGCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQKIWLG*GLQPVL
Trigger: AAGGACTGGCTGAAGTCCCAATCCCAACCAGATTTT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGGGAAGGAACATTTTaGGGAGGCTCTATTCGAATG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFWEGTF*GGSIRM
Trigger: CATTCGAATAGAGCCTCCCAAAAATGTTCCTTCCCA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTGGGAAGGAACATTTTaGGGAGGCTCTATTCGAATG +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLWEGTF*GGSIRM
Trigger: CATTCGAATAGAGCCTCCCAAAAATGTTCCTTCCCA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTACAGTTACACGAGTATaGTGTCAGCAGTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSTVTRV*CQQFQI
Trigger: GATCTGGAACTGCTGACACAATACTCGTGTAACTGT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACAGTTACACGAGTATaGTGTCAGCAGTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTVTRV*CQQFQI
Trigger: GATCTGGAACTGCTGACACAATACTCGTGTAACTGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTGGTACTTGTAGTTTaGGAGATGGGATCCCAATGG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFLVLVV*EMGSQW
Trigger: CCATTGGGATCCCATCTCCAAAACTACAAGTACCAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTGGTACTTGTAGTTTaGGAGATGGGATCCCAATGG +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSLVLVV*EMGSQW
Trigger: CCATTGGGATCCCATCTCCAAAACTACAAGTACCAA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTCATCTCTAGTGGGCTaGAAAACACTTGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQSSLVG*KTLGTC
Trigger: ACAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGAAGCCCAGTAACCCTTaGCTCCCGAATGCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: AMICILTQLGSPKLCQRQKPSNP*LPNAEK
Trigger: TTTCTCGGCATTCGGGAGCAAAGGGTTACTGGGCTT...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGAATCTGGTTGATGTTTaGCCGGCATCCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQNLVDV*PASRRA
Trigger: AGCTCTTCTGGATGCCGGCAAAACATCAACCAGATT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTATTTCTTCTAAAGTGTaGGCATGCATGTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSISSKV*ACMSSN
Trigger: GTTGCTGGACATGCATGCCAACACTTTAGAAGAAAT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCAAATGCAGATCAACCTaGCTAAAGTCAACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFKCRST*LKSTVL
Trigger: CAGCACTGTTGACTTTAGCAAGGTTGATCTGCATTT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTAAATGCAGATCAACCTaGCTAAAGTCAACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSKCRST*LKSTVL
Trigger: CAGCACTGTTGACTTTAGCAAGGTTGATCTGCATTT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGACTTCAGCCAGTCCTaGAAGCAATACAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKDFSQS*KQYSWR
Trigger: TCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGAGCTGCTGTTCCATTaGGTACAGCAGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKELLFH*VQQESS
Trigger: GGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTCAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGACAGTTACACGAGTATaGTGTCAGCAGTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQTVTRV*CQQFQI
Trigger: GATCTGGAACTGCTGACACAATACTCGTGTAACTGT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATCCTTCAATGTGCCATaGCTGGGATTATGCGGTTCC +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKSFNVP*LGLCGS
Trigger: GGAACCGCATAATCCCAGCAATGGCACATTGAAGGA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCTCCATGCAATGATTaGCATTCTGACACAGTTAGG +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSPCND*HSDTVR
Trigger: CCTAACTGTGTCAGAATGCAAATCATTGCATGGAGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCATCTCTAGTGGGCTaGAAAACACTTGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSSLVG*KTLGTC
Trigger: ACAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCATCTCTAGTGGGCTaGAAAACACTTGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSSLVG*KTLGTC
Trigger: ACAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CATAGAGTTGCAGTCCAAAGTCCAATGCTAGCTCTTAAAGATAGGTATGACAGCCGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: HRVAVQSPMLALKDRYDSRMPRN*GCSPGA
Trigger: AGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCG...GCTGTCATACCTATCTTTAAGAGCTAGCATTGGACTTTGGACTGCAACTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp CATATGGGTGATCATGGCCACAGGCCCGTCCAACATACTCTCCATGCAATGATTGTATATAAAATCTGGTaGATGTTTTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: HMGDHGHRPVQHTLHAMIVYKIW*MFCRHP
Trigger: TGGATGCCGGCAAAACATCAACCAGATTTTATATAC...AATCATTGCATGGAGAGTATGTTGGACGGGCCTGTGGCCATGATCACCCATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGAAGGTGGATTTGGGTaGAGGGACAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSEGGFG*RDRIYN
Trigger: ATTGTAAATTCTGTCCCTCAACCCAAATCCACCTTC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGAAGGTGGATTTGGGTaGAGGGACAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFEGGFG*RDRIYN
Trigger: ATTGTAAATTCTGTCCCTCAACCCAAATCCACCTTC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTCTTGCATTGGCTATaGTATCTGCTCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQFLHWL*YLLTGM
Trigger: CATCCCTGTGAGCAGATACAATAGCCAATGCAAGAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTACACAGATTCTTGCATaGGCTATTGTATCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSTQILA*AIVSAH
Trigger: GTGAGCAGATACAATAGCCAATGCAAGAATCTGTGT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCTTTTTCATGCCTTaGTTTCATCCCACATGGACT +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSFFMP*FHPTWT
Trigger: AGTCCATGTGGGATGAAACAAAGGCATGAAAAAGGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS-3UTR CAA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTCGAAGATACCGGATATaGGTGACCTTCCAGTTCGCT +
Preference number: 5 (lower is better)
Translates to: YGSNLGWKISASLELLQGRRYRI*VTFQFA
Trigger: AGCGAACTGGAAGGTCACCAATATCCGGTATCTTCG...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS TCA 90 bp TTCATCAATGCCTCATGGACCCTATGGCGTACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGGTCAAGAACCATATCTGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: FINASWTLWRTSSFS*PELTCWSRTISAIS
Trigger: AGAAATTGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGTACGCCATAGGGTCCATGAGGCATTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000461456.5
ENST00000493021.5
CDS TCA 90 bp GCTGATGACTTAGAGATTGAAAAGGCTCACAGGTTCCAGACTGCATaGCCTTTCTATTTCCAGAAACCCCTAAAGACTGCATTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ADDLEIEKAHRFQTA*PFYFQKPLKTAFPV
Trigger: GACAGGAAATGCAGTCTTTAGGGGTTTCTGGAAATAGAAAGGTCATGCAGTCTGGAACCTGTGAGCCTTTTCAATCTCTAAGTCATCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493021.5
CDS GCA 90 bp TTCACTTTGAATAGGCCAATGAAGGCGCAGAAGCAGAGGTCACATTaGATGATAAATGTGTCCTACAGCTCACACAGTGGAAATCTCATC +
Preference number: 5 (lower is better)
Translates to: FTLNRPMKAQKQRSH*MINVSYSSHSGNLI
Trigger: GATGAGATTTCCACTGTGTGAGCTGTAGGACACATTTATCATGCAATGTGACCTCTGCTTCTGCGCCTTCATTGGCCTATTCAAAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482861.5
CDS GCA 90 bp TTCACTTTGAATAGGCCAATGAAGGCGCAGAAGCAGAGGTCACATTaGATGATAAATGTGTCCTACAGCTCACACAGTGGAAATCTCTCA +
Preference number: 5 (lower is better)
Translates to: FTLNRPMKAQKQRSH*MINVSYSSHSGNLS
Trigger: TGAGAGATTTCCACTGTGTGAGCTGTAGGACACATTTATCATGCAATGTGACCTCTGCTTCTGCGCCTTCATTGGCCTATTCAAAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS-3UTR CAA 90 bp TATGGATCGAACCTTGGTTGGAAAATATCTGCTAGTCTTGAACTGCTTCAGGGTTCTGGAATAAGCACCTaGCTCTGCAGTGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: YGSNLGWKISASLELLQGSGIST*LCSVFS
Trigger: ACTGAAGACACTGCAGAGCAAGGTGCTTATTCCAGA...ACCCTGAAGCAGTTCAAGACTAGCAGATATTTTCCAACCAAGGTTCGATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGATTTCTTCTAAAGTGTaGGCATGCATGTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQISSKV*ACMSSN
Trigger: GTTGCTGGACATGCATGCCAACACTTTAGAAGAAAT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTTTGTCCATGGAATTaGGTTCTGACTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFFCPWN*VLTVSC
Trigger: GCAAGAAACAGTCAGAACCAAATTCCATGGACAAAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTTTGTCCATGGAATTaGGTTCTGACTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLFCPWN*VLTVSC
Trigger: GCAAGAAACAGTCAGAACCAAATTCCATGGACAAAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATATTGGATTCCCTCCATTCCTTCAATGTGCCATTGCTGGGATTATGCGGTTCCCAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ILDSLHSFNVPLLGLCGSQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...GGAACCGCATAATCCCAGCAATGGCACATTGAAGGAATGGAGGGAATCCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCTCCATGCAATGATTaGCATTCTGACACAGTTAGG +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSPCND*HSDTVR
Trigger: CCTAACTGTGTCAGAATGCAAATCATTGCATGGAGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTACTATGGATCGAACCTaGGTTGGAAAATATCTGCTA +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSTMDRT*VGKYLL
Trigger: TAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACTATGGATCGAACCTaGGTTGGAAAATATCTGCTA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTMDRT*VGKYLL
Trigger: TAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAAATCTGGTTGATGTTTaGCCGGCATCCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKNLVDV*PASRRA
Trigger: AGCTCTTCTGGATGCCGGCAAAACATCAACCAGATT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTGTATATAAAATCTGGTaGATGTTTTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSVYKIW*MFCRHP
Trigger: TGGATGCCGGCAAAACATCAACCAGATTTTATATAC...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCGTATATAAAATCTGGTaGATGTTTTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFVYKIW*MFCRHP
Trigger: TGGATGCCGGCAAAACATCAACCAGATTTTATATAC...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CCAAAAATCAGAGAACAGTGCAAGAGCAGCCCAGATGTACACCAGCAACTCCAGTCCACAAGGCAGTCTTaGACATTTCATCAGATATAT +
Preference number: 5 (lower is better)
Translates to: PKIREQCKSSPDVHQQLQSTRQS*TFHQIY
Trigger: ATATATCTGATGAAATGTCAAAGACTGCCTTGTGGA...CTGGAGTTGCTGGTGTACATCTGGGCTGCTCTTGCACTGTTCTCTGATTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GTCCACCATGGGTTTGGACCTAAAGGCGTAACAAACCAGCCACGATCATCTCTATTTTGGAAGGAAAGCTaGACTCCTTATCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: VHHGFGPKGVTNQPRSSLFWKES*TPYLLS
Trigger: ACTCAAAAGATAAGGAGTCAAGCTTTCCTTCCAAAA...TAGAGATGATCGTGGCTGGTTTGTTACGCCTTTAGGTCCAAACCCATGGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGAAGGTGGATTTGGGTaGAGGGACAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQEGGFG*RDRIYN
Trigger: ATTGTAAATTCTGTCCCTCAACCCAAATCCACCTTC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGACACAGATTCTTGCATaGGCTATTGTATCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQTQILA*AIVSAH
Trigger: GTGAGCAGATACAATAGCCAATGCAAGAATCTGTGT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGGGAACACACAGATTCTaGCATTGGCTATTGTATCTG +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQGTHRF*HWLLYL
Trigger: CAGATACAATAGCCAATGCAAGAATCTGTGTGTTCC...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTCCTTTTTCATGCCTTaGTTTCATCCCACATGGACT +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQSFFMP*FHPTWT
Trigger: AGTCCATGTGGGATGAAACAAAGGCATGAAAAAGGA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421911.1
ENST00000446997.6
CDS TCA 90 bp TCTGATGACTTAGAGATTGAAAAGGCTCACAGGTTCCAGACTGCATaGCCTTTCTATTTCCAGAAACCCCTAAAGACTGCATTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: SDDLEIEKAHRFQTA*PFYFQKPLKTAFPV
Trigger: GACAGGAAATGCAGTCTTTAGGGGTTTCTGGAAATAGAAAGGTCATGCAGTCTGGAACCTGTGAGCCTTTTCAATCTCTAAGTCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375514.9
ENST00000461456.5
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACAGCAGCGGCTCCATTaGGGCTCCCTGGTCTTTAAT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTQQRLH*GSLVFN
Trigger: ATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCTCAAAGTGTGTTTaGAGAATAGAACGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFFSKCV*RIERVP
Trigger: TGGAACTCGTTCTATTCTCAAAACACACTTTGAGAA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTTCTCAAAGTGTGTTTaGAGAATAGAACGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLFSKCV*RIERVP
Trigger: TGGAACTCGTTCTATTCTCAAAACACACTTTGAGAA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATGGGAAGGAACATTTTaGGGAGGCTCTATTCGAATG +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKWEGTF*GGSIRM
Trigger: CATTCGAATAGAGCCTCCCAAAAATGTTCCTTCCCA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGACTATGGATCGAACCTaGGTTGGAAAATATCTGCTA +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQTMDRT*VGKYLL
Trigger: TAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCCCCTTCCAATGGGAGTaGTACTGTGCCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFPFQWE*YCALIF
Trigger: GAAGATGAGGGCACAGTACAACTCCCATTGGAAGGG...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp GATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTTCCACAAGGCAGTCTTaGACATTTCATCAGATATAT +
Preference number: 5 (lower is better)
Translates to: DRVIDKSPCQHLSLSQLSSTRQS*TFHQIY
Trigger: ATATATCTGATGAAATGTCAAAGACTGCCTTGTGGA...AGAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp GAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCCACAAGGCAGTCTTaGACATTTCATCAGATATAT +
Preference number: 5 (lower is better)
Translates to: EDRVIDKSPCQHLSLSQLSTRQS*TFHQIY
Trigger: ATATATCTGATGAAATGTCAAAGACTGCCTTGTGGA...AAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCTCCACAAGGCAGTCTTaGACATTTCATCAGATATAT +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFSTRQS*TFHQIY
Trigger: ATATATCTGATGAAATGTCAAAGACTGCCTTGTGGA...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp CCAGCTGAGTTCCCGCTTCGTGAACAACAAGTCCATCAACTTTCTTACAAATACGAAGGTGGATTTGGGTaGAGGGACAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: PAEFPLREQQVHQLSYKYEGGFG*RDRIYN
Trigger: ATTGTAAATTCTGTCCCTCAACCCAAATCCACCTTC...GTATTTGTAAGAAAGTTGATGGACTTGTTGTTCACGAAGCGGGAACTCAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATTCTTGCATTGGCTATaGTATCTGCTCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKFLHWL*YLLTGM
Trigger: CATCCCTGTGAGCAGATACAATAGCCAATGCAAGAA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGCTTTCACAAAGGCAACACATTaGGAACAGAAAGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: RSSHRQVSLSTPFPESAFTKATH*EQKVSV
Trigger: TACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTGT...GAAAGCTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGTTCTCAAAGTGTGTTTaGAGAATAGAACGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQFSKCV*RIERVP
Trigger: TGGAACTCGTTCTATTCTCAAAACACACTTTGAGAA...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAATTTCTTCTAAAGTGTaGGCATGCATGTCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKISSKV*ACMSSN
Trigger: GTTGCTGGACATGCATGCCAACACTTTAGAAGAAAT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAACAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGGAACACACAGATTCTaGCATTGGCTATTGTATCTG +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKGTHRF*HWLLYL
Trigger: CAGATACAATAGCCAATGCAAGAATCTGTGTGTTCC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp ATTGAAGATCGAGTCATAGACAAGTCTCCCTGTCAACACCTTTCCCTGAGTCAGACAAAGGCAACACATTaGGAACAGAAAGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: IEDRVIDKSPCQHLSLSQTKATH*EQKVSV
Trigger: TACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTGT...CTGACTCAGGGAAAGGTGTTGACAGGGAGACTTGTCTATGACTCGATCTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS GCA 90 bp GTTCCAGACTGCATGACCTTTCTATTTCCAGAAACCCCTAAAGACTaGATTTCCTGTCTTACAAAAGATAATCACAGCCATCTCTATGTC +
Preference number: 5 (lower is better)
Translates to: VPDCMTFLFPETPKD*ISCLTKDNHSHLYV
Trigger: GACATAGAGATGGCTGTGATTATCTTTTGTAAGACAGGAAATGCAGTCTTTAGGGGTTTCTGGAAATAGAAAGGTCATGCAGTCTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000461456.5
ENST00000493021.5
CDS-3UTR CAA 90 bp GCCACCATTAATAGGTCCAGATGGTACCCACAACCTTTCTTTAGCTTATGCTCTTTCTCAAAGTGTGTTTaGAGAATAGAACGAGTTCCA +
Preference number: 5 (lower is better)
Translates to: ATINRSRWYPQPFFSLCSFSKCV*RIERVP
Trigger: TGGAACTCGTTCTATTCTCAAAACACACTTTGAGAA...AGAGCATAAGCTAAAGAAAGGTTGTGGGTACCATCTGGACCTATTAATGGTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAATTTTGTCCATGGAATTaGGTTCTGACTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKFCPWN*VLTVSC
Trigger: GCAAGAAACAGTCAGAACCAAATTCCATGGACAAAA...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp GCAATGATTTGCATTCTGACACAGTTAGGTTCTCCCAAATTATGTCAGAGGCAGTTTTGTCCATGGAATTaGGTTCTGACTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: AMICILTQLGSPKLCQRQFCPWN*VLTVSC
Trigger: GCAAGAAACAGTCAGAACCAAATTCCATGGACAAAA...CTGCCTCTGACATAATTTGGGAGAACCTAACTGTGTCAGAATGCAAATCATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGACTTCAGCCAGTCCTaGAAGCAATACAGCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTDFSQS*KQYSWR
Trigger: TCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGAAAATCTGGTTGGGATaGGGACTTCAGCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGKIWLG*GLQPVL
Trigger: AAGGACTGGCTGAAGTCCCAATCCCAACCAGATTTT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGCTCTATTCGAATGCTaGGATCCCATTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTALFEC*DPILQE
Trigger: CTCCTGGAGAATGGGATCCAAGCATTCGAATAGAGC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGAGCTGCTGTTCCATTaGGTACAGCAGGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTELLFH*VQQESS
Trigger: GGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACACGAATGCCGAGAAATTaGGGTTGTTCTCCTGGAGCT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTRMPRN*GCSPGA
Trigger: AGCTCCAGGAGAACAACCCAAATTTCTCGGCATTCG...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAGTATATAAAATCTGGTaGATGTTTTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKVYKIW*MFCRHP
Trigger: TGGATGCCGGCAAAACATCAACCAGATTTTATATAC...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATCTGGAATAAGCACCTaGCTCTGCAGTGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTSGIST*LCSVFS
Trigger: ACTGAAGACACTGCAGAGCAAGGTGCTTATTCCAGA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAAAAATCTGGTTGGGATaGGGACTTCAGCCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTKIWLG*GLQPVL
Trigger: AAGGACTGGCTGAAGTCCCAATCCCAACCAGATTTT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGACAGTTACACGAGTATaGTGTCAGCAGTTCCAGATC +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGTVTRV*CQQFQI
Trigger: GATCTGGAACTGCTGACACAATACTCGTGTAACTGT...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTGGTACTTGTAGTTTaGGAGATGGGATCCCAATGG +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGLVLVV*EMGSQW
Trigger: CCATTGGGATCCCATCTCCAAAACTACAAGTACCAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCTTGGTACTTGTAGTTTaGGAGATGGGATCCCAATGG +
Preference number: 5 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFLVLVV*EMGSQW
Trigger: CCATTGGGATCCCATCTCCAAAACTACAAGTACCAA...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTCTTGCATTGGCTATaGTATCTGCTCACAGGGATG +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFLHWL*YLLTGM
Trigger: CATCCCTGTGAGCAGATACAATAGCCAATGCAAGAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TGCATTGGCTATTGTATCTGCTCACAGGGATGTCTCACTGCTCAGAAGTTTAAAACAAAGGCAACACATTaGGAACAGAAAGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: CIGYCICSQGCLTAQKFKTKATH*EQKVSV
Trigger: TACAGAAACTTTCTGTTCCAAATGTGTTGCCTTTGT...TTTAAACTTCTGAGCAGTGAGACATCCCTGTGAGCAGATACAATAGCCAATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGCAAAGAGAGATTCAATaGCACTTATACGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGQREIQ*HLYALQ
Trigger: CTGAAGGGCGTATAAGTGCAATTGAATCTCTCTTTG...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp TTGTTCTTCTTCTTTTTCAGCATCTTCCAGTTTCTTTTTCTTACTCTCGGGCATTCTCCATGCAATGATTaGCATTCTGACACAGTTAGG +
Preference number: 5 (lower is better)
Translates to: LFFFFFSIFQFLFLTLGHSPCND*HSDTVR
Trigger: CCTAACTGTGTCAGAATGCAAATCATTGCATGGAGA...ATGCCCGAGAGTAAGAAAAAGAAACTGGAAGATGCTGAAAAAGAAGAAGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTGGTACTTGTAGTTTaGGAGATGGGATCCCAATGG +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTLVLVV*EMGSQW
Trigger: CCATTGGGATCCCATCTCCAAAACTACAAGTACCAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS GCA 90 bp AAAGTGTGTTTTGAGAATAGAACGAGTTCCACCTCTATCCACAACTaGTTCTTCATCATTTCTTGTTCGTTAAGTGAAAGTGGATCATCA +
Preference number: 5 (lower is better)
Translates to: KVCFENRTSSTSIHN*FFIISCSLSESGSS
Trigger: TGATGATCCACTTTCACTTAACGAACAAGAAATGATGAAGAAGCAGTTGTGGATAGAGGTGGAACTCGTTCTATTCTCAAAACACACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482861.5
CDS-3UTR CAA 90 bp TCCAGATCATTATGCATGTTGATTGGATATGCTTCACTGAGTTCAAACAACTTCACTATGGATCGAACCTaGGTTGGAAAATATCTGCTA +
Preference number: 5 (lower is better)
Translates to: SRSLCMLIGYASLSSNNFTMDRT*VGKYLL
Trigger: TAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT...GAAGTTGTTTGAACTCAGTGAAGCATATCCAATCAACATGCATAATGATCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446228.5
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATCATCTCTAGTGGGCTaGAAAACACTTGGTACTTGT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTSSLVG*KTLGTC
Trigger: ACAAGTACCAAGTGTTTTCAAGCCCACTAGAGATGA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAGAAGGTGGATTTGGGTaGAGGGACAGAATTTACAAT +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTEGGFG*RDRIYN
Trigger: ATTGTAAATTCTGTCCCTCAACCCAAATCCACCTTC...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACATTTTGTCCATGGAATTaGGTTCTGACTGTTTCTTGC +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTFCPWN*VLTVSC
Trigger: GCAAGAAACAGTCAGAACCAAATTCCATGGACAAAA...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp CTCTTTAAGGAAGCTATTGCTCTCATAAAACTGACAATCAGAATCCAGTTTACAACTATGGATCGAACCTaGGTTGGAAAATATCTGCTA +
Preference number: 5 (lower is better)
Translates to: LFKEAIALIKLTIRIQFTTMDRT*VGKYLL
Trigger: TAGCAGATATTTTCCAACCAAGGTTCGATCCATAGT...TGTAAACTGGATTCTGATTGTCAGTTTTATGAGAGCAATAGCTTCCTTAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS-3UTR CAA 90 bp AACACAGAAATGAAACAAGTATTGCACTACTTACAGTATGAAGGTGGATTTGGGTTTTGGAAGGAAAGCTaGACTCCTTATCTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: NTEMKQVLHYLQYEGGFGFWKES*TPYLLS
Trigger: ACTCAAAAGATAAGGAGTCAAGCTTTCCTTCCAAAA...CCCAAATCCACCTTCATACTGTAAGTAGTGCAATACTTGTTTCATTTCTGTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
CDS TCA 72 bp GTGTCCTACAGCTCACACAGTGGAAATCTCTCACGCTaGCTCAGTCCACGCAGCAGATGGTGGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: VSYSSHSGNLSR*LSPRSRWWRSC
Trigger: GCAGCTCCGCCACCATCTGCTGCGTGGACTGAGTCAGCGTGAGAGATTTCCACTGTGTGAGCTGTAGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS TCA 72 bp AGCTCCTTCCTACAGCTGGTAGTCCCAACATCTGTATaGGTCTGGCTGAGTCCGGAGGCGGGGTGGGGTTAT +
Preference number: 6 (lower is better)
Translates to: SSFLQLVVPTSV*VWLSPEAGWGY
Trigger: ATAACCCCACCCCGCCTCCGGACTCAGCCAGACTCATACAGATGTTGGGACTACCAGCTGTAGGAAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS GCA 72 bp ACTCACCAGAGTCACATGGCTCCTACTCACTCGGGCTaGTGGCCAGGTTTTGCACTGAATGCCTTGGATCCC +
Preference number: 6 (lower is better)
Translates to: THQSHMAPTHSG*WPGFALNALDP
Trigger: GGGATCCAAGGCATTCAGTGCAAAACCTGGCCAGCAGCCCGAGTGAGTAGGAGCCATGTGACTCTGGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605990.5
CDS CCA 72 bp CAGGGCGTAGGCAGCAGCGGCTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTTTGTAACGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: QGVGSSGSIWAP*SLISMFCNASG
Trigger: TCCAGAGGCGTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000461456.5
ENST00000493021.5
CDS GCA 72 bp ACTATGTCCTCCGTGGGGCTCTGCTTCCCCATGAGCTaGTGTTCCATTTGGTACAGCAGGAATCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: TMSSVGLCFPMS*CSIWYSRNLPL
Trigger: AAGAGGAAGATTCCTGCTGTACCAAATGGAACAGCAGCTCATGGGGAAGCAGAGCCCCACGGAGGACATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000493021.5
CDS GCA 72 bp GTCTTCAGTGTCTTACACTCAGCCCGGCACTCGCTCTaGTTAGTATTCGGATCAGGTAGCTCTGAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VFSVLHSARHSL*LVFGSGSSEAG
Trigger: TCCTGCTTCAGAGCTACCTGATCCGAATACTAAGCAGAGCGAGTGCCGGGCTGAGTGTAAGACACTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375514.9
ENST00000415876.6
ENST00000493021.5
ENST00000605990.5
CDS CCA 72 bp CAGCATCTTCAGGGCGTAGGCAGCAGCGGCTCCATTTaGGCTCCCTGGTCTTTAATCTCCATGTTTTGTAAC +
Preference number: 6 (lower is better)
Translates to: QHLQGVGSSGSI*APWSLISMFCN
Trigger: GTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGCCCTGAAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000461456.5
ENST00000493021.5
CDS TCA 72 bp CTCCTACTCACTCGGGCTGCTGGCCAGGTTTTGCACTaGATGCCTTGGATCCCTAAGATGCTCACTTTTCAT +
Preference number: 6 (lower is better)
Translates to: LLLTRAAGQVLH*MPWIPKMLTFH
Trigger: ATGAAAAGTGAGCATCTTAGGGATCCAAGGCATTCAGTGCAAAACCTGGCCAGCAGCCCGAGTGAGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605990.5
CDS CCA 72 bp TTTCTCGTAGGCAGCAGCGGCTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTTTGTAACGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: FLVGSSGSIWAP*SLISMFCNASG
Trigger: TCCAGAGGCGTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272716.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS CCA 72 bp TTATCCGTAGGCAGCAGCGGCTCCATTTGGGCTCCCTaGTCTTTAATCTCCATGTTTTGTAACGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LSVGSSGSIWAP*SLISMFCNASG
Trigger: TCCAGAGGCGTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481721.1
CDS CCA 72 bp CCCATAGAAGTGATTTTCACTAACCTTCCAGTTCGCTaGAGTTCAGGTCCACTATGTCCTCCGTGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PIEVIFTNLPVR*SSGPLCPPWGS
Trigger: AGAGCCCCACGGAGGACATAGTGGACCTGAACTCCAGCGAACTGGAAGGTTAGTGAAAATCACTTCTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493021.5
CDS CCA 72 bp TGTTTCATCCCACATGGACTAGTATGCCCCTTTTGTTaGCCTCCCAGTCCCTTGCTAAAGTCAACAGTGCTG +
Preference number: 6 (lower is better)
Translates to: CFIPHGLVCPFC*PPSPLLKSTVL
Trigger: CAGCACTGTTGACTTTAGCAAGGGACTGGGAGGCCAACAAAAGGGGCATACTAGTCCATGTGGGATGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421911.1
ENST00000446997.6
ENST00000493021.5
CDS CAA 90 bp TGGTCTTTAATCTCCATGTTTTGTAACGCCTCTGGAATAAGCACCTaGCTCTGCAGTGTCTTCAGTGTCTTACACTCAGCCCGGCACTCG +
Preference number: 6 (lower is better)
Translates to: WSLISMFCNASGIST*LCSVFSVLHSARHS
Trigger: CGAGTGCCGGGCTGAGTGTAAGACACTGAAGACACTGCAGAGCAAGGTGCTTATTCCAGAGGCGTTACAAAACATGGAGATTAAAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000446997.6
ENST00000461456.5
ENST00000481721.1
ENST00000493021.5
ENST00000605990.5
CDS TCA 72 bp GCCTCATGGACCCTATGGCGTACATCTTCATTCAGCTaGCCTGAGCTCACTTGTTGGTCAAGAACCATATCT +
Preference number: 6 (lower is better)
Translates to: ASWTLWRTSSFS*PELTCWSRTIS
Trigger: AGATATGGTTCTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGTACGCCATAGGGTCCATGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000461456.5
ENST00000493021.5
CDS TCA 72 bp CAGCCAGTCCTTGAAGCAATACAGCTGGAGACAACCTaGCAAACGCAACTACTGTTCGATCCAAGAACTCCA +
Preference number: 6 (lower is better)
Translates to: QPVLEAIQLETT*QTQLLFDPRTP
Trigger: TGGAGTTCTTGGATCGAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAAGGACTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000493021.5
CDS TCA 72 bp TTGGCCTCCAACCAGATCAGTCTGATTTTGACACTTTaGGGTACTCGCTTCATTCTCAGAACCCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: LASNQISLILTL*GTRFILRTLPW
Trigger: CCAAGGCAGGGTTCTGAGAATGAAGCGAGTACCTCAAAGTGTCAAAATCAGACTGATCTGGTTGGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605990.5
CDS CCA 72 bp GATTGGGACTTCAGCCAGTCCTTGAAGCAATACAGCTaGAGACAACCTGACAAACGCAACTACTGTTCGATC +
Preference number: 6 (lower is better)
Translates to: DWDFSQSLKQYS*RQPDKRNYCSI
Trigger: GATCGAACAGTAGTTGCGTTTGTCAGGTTGTCTCCAGCTGTATTGCTTCAAGGACTGGCTGAAGTCCCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000493021.5
CDS CCA 72 bp ACATTGCATGATAAATGTGTCCTACAGCTCACACAGTaGAAATCTCTCACGCTGACTCAGTCCACGCAGCAG +
Preference number: 6 (lower is better)
Translates to: TLHDKCVLQLTQ*KSLTLTQSTQQ
Trigger: CTGCTGCGTGGACTGAGTCAGCGTGAGAGATTTCCACTGTGTGAGCTGTAGGACACATTTATCATGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS CAA 72 bp GTTGGCCTCCAACCAGATCAGTCTGATTTTGACACTTaGAGGTACTCGCTTCATTCTCAGAACCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: VGLQPDQSDFDT*RYSLHSQNPAL
Trigger: CAAGGCAGGGTTCTGAGAATGAAGCGAGTACCTCAAAGTGTCAAAATCAGACTGATCTGGTTGGAGGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605990.5
CDS GCA 72 bp TTTGAGAATAGAACGAGTTCCACCTCTATCCACAACTaGTTCTTCATCATTTCTCGTAGGCAGCAGCGGCTC +
Preference number: 6 (lower is better)
Translates to: FENRTSSTSIHN*FFIISRRQQRL
Trigger: GAGCCGCTGCTGCCTACGAGAAATGATGAAGAAGCAGTTGTGGATAGAGGTGGAACTCGTTCTATTCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000272716.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS GCA 72 bp TTTTCATGCCTTTGTTTCATCCCACATGGACTAGTATaGCCCTTTTGTTGGCCTCCCAGTCCCTTGCTAAAG +
Preference number: 6 (lower is better)
Translates to: FSCLCFIPHGLV*PFCWPPSPLLK
Trigger: CTTTAGCAAGGGACTGGGAGGCCAACAAAAGGGGCATACTAGTCCATGTGGGATGAAACAAAGGCATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421911.1
ENST00000446997.6
ENST00000493021.5
CDS GCA 72 bp AATAGGCCAATGAAGGCGCAGAAGCAGAGGTCACATTaGATGATAAATGTGTCCTACAGCTCACACAGTGGA +
Preference number: 6 (lower is better)
Translates to: NRPMKAQKQRSH*MINVSYSSHSG
Trigger: TCCACTGTGTGAGCTGTAGGACACATTTATCATGCAATGTGACCTCTGCTTCTGCGCCTTCATTGGCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482861.5
ENST00000606386.1
CDS CCA 72 bp TCTTCATCATTTCTCGTAGGCAGCAGCGGCTCCATTTaGGCTCCCTGGTCTTTAATCTCCATGTTTTGTAAC +
Preference number: 6 (lower is better)
Translates to: SSSFLVGSSGSI*APWSLISMFCN
Trigger: GTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGAGAAATGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000272716.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
CDS CCA 72 bp AGATCAAGATTATCCGTAGGCAGCAGCGGCTCCATTTaGGCTCCCTGGTCTTTAATCTCCATGTTTTGTAAC +
Preference number: 6 (lower is better)
Translates to: RSRLSVGSSGSI*APWSLISMFCN
Trigger: GTTACAAAACATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGGATAATCTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481721.1
CDS TCA 72 bp ATGGACCCTATGGCGTACATCTTCATTCAGCTGACCTaGGCTCACTTGTTGGTCAAGAACCATATCTGCAAT +
Preference number: 6 (lower is better)
Translates to: MDPMAYIFIQLT*AHLLVKNHICN
Trigger: ATTGCAGATATGGTTCTTGACCAACAAGTGAGCTCAGGTCAGCTGAATGAAGATGTACGCCATAGGGTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000272716.9
ENST00000375514.9
ENST00000415876.6
ENST00000421911.1
ENST00000446228.5
ENST00000446997.6
ENST00000461456.5
ENST00000493021.5
CDS CAA 72 bp GTTGGCCTCCAACCAGATCAGTCTGATTTTGACACTTaGAGGTACTCGCTTCATTCTCAGAACCTGTTCGTT +
Preference number: 6 (lower is better)
Translates to: VGLQPDQSDFDT*RYSLHSQNLFV
Trigger: AACGAACAGGTTCTGAGAATGAAGCGAGTACCTCAAAGTGTCAAAATCAGACTGATCTGGTTGGAGGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS CAA 90 bp GTGAAAGTGGATCATCATAAAGTCCTCATCCTCATCATCTTCACTTaGAATAGGCCAATGAAGGCGCAGAAGCAGAGGTCACATTGCATG +
Preference number: 6 (lower is better)
Translates to: VKVDHHKVLILIIFT*NRPMKAQKQRSHCM
Trigger: CATGCAATGTGACCTCTGCTTCTGCGCCTTCATTGGCCTATTCAAAGTGAAGATGATGAGGATGAGGACTTTATGATGATCCACTTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482861.5
ENST00000606386.1
CDS TCA 72 bp TTGGCCTCCAACCAGATCAGTCTGATTTTGACACTTTaGGGTACTCGCTTCATTCTCAGAACCTGTTCGTTA +
Preference number: 6 (lower is better)
Translates to: LASNQISLILTL*GTRFILRTCSL
Trigger: TAACGAACAGGTTCTGAGAATGAAGCGAGTACCTCAAAGTGTCAAAATCAGACTGATCTGGTTGGAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606386.1
CDS CAA 72 bp GATCATCATAAAGTCCTCATCCTCATCATCTTCACTTaGAATAGGCCAATGAAGGCGCAGAAGCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: DHHKVLILIIFT*NRPMKAQKQRS
Trigger: TGACCTCTGCTTCTGCGCCTTCATTGGCCTATTCAAAGTGAAGATGATGAGGATGAGGACTTTATGATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482861.5
ENST00000606386.1
CDS TCA 72 bp TTAGAGATTGAAAAGGCTCACAGGTTCCAGACTGCATaGCCTTTCTATTTCCAGAAACCCCTAAAGACTGCA +
Preference number: 6 (lower is better)
Translates to: LEIEKAHRFQTA*PFYFQKPLKTA
Trigger: TGCAGTCTTTAGGGGTTTCTGGAAATAGAAAGGTCATGCAGTCTGGAACCTGTGAGCCTTTTCAATCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000461456.5
ENST00000493021.5
CDS GCA 72 bp TGCATGACCTTTCTATTTCCAGAAACCCCTAAAGACTaGATTTCCTGTCTTACAAAAGATAATCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: CMTFLFPETPKD*ISCLTKDNHSH
Trigger: ATGGCTGTGATTATCTTTTGTAAGACAGGAAATGCAGTCTTTAGGGGTTTCTGGAAATAGAAAGGTCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375514.9
ENST00000461456.5
ENST00000493021.5
CDS GCA 72 bp TTTGAGAATAGAACGAGTTCCACCTCTATCCACAACTaGTTCTTCATCATTTCTTGTTCGTTAAGTGAAAGT +
Preference number: 6 (lower is better)
Translates to: FENRTSSTSIHN*FFIISCSLSES
Trigger: ACTTTCACTTAACGAACAAGAAATGATGAAGAAGCAGTTGTGGATAGAGGTGGAACTCGTTCTATTCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482861.5