RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC49A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000169026

Ensembl transcript IDs: ENST00000322224.9, ENST00000347950.9, ENST00000404286.6, ENST00000503156.5, ENST00000507165.5, ENST00000512249.1, ENST00000512400.1, ENST00000513740.1, ENST00000515118.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTaGTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCAGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: DPACESAGAGGRVGG*WALRTGSRSVAGWV
Trigger: CACCCAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 90 bp CTTGGACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTaGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: LGPCLRVCRGGRARR*LLGLAHGESLGGRL
Trigger: CAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR GCA 90 bp GTGAGACCCAGCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: VRPSRVNKPGRLDPA*ESAGAGGRVGGCWA
Trigger: GGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 90 bp TCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACC +
Preference number: 1 (lower is better)
Translates to: SLPEPARSPFAPARR*TRCSSSPPSMWRAT
Trigger: GGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
3UTR TCA 90 bp AAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCT +
Preference number: 1 (lower is better)
Translates to: KALSYVITHGEEKEE*DPAGSINLDAWTLP
Trigger: AGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR-3UTR CCA 90 bp CTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCCGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 2 (lower is better)
Translates to: LPASLPGREGASVAAGPCRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...GCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR-3UTR CCA 90 bp CTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCTCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 2 (lower is better)
Translates to: LPASLPGREGASVAAGPCSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...GCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CAA 90 bp GGAGAAGGAGGAGTGAGACCCAGCCGGGTCAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGT +
Preference number: 2 (lower is better)
Translates to: GEGGVRPSRVNKPGR*DPACESAGAGGRVG
Trigger: ACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCACTCCTCCTTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR-3UTR CCA 90 bp CCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 2 (lower is better)
Translates to: PARRWTRCSSSPPSMWRAAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...TGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
3UTR-3UTR CCA 90 bp CGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCATCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 2 (lower is better)
Translates to: RSPQGALSPPPAGGPDVPSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...TGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
3UTR-3UTR CCA 90 bp CCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCATCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 2 (lower is better)
Translates to: PARRWTRCSSSPPSMWRASPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...TGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
3UTR GCA 72 bp CCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTaGGCACGGGGAGTCGCTCGGTGGCAGGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: PGREGASVAAGP*ARGVARWQAGW
Trigger: CCACCCAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 72 bp GTGGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTCCCGGGCCCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: VAAGPCARGVAR*QAGWGLPGPLG
Trigger: CCCCAGAGGGCCCGGGAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR GCA 72 bp TGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTaGTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCA +
Preference number: 3 (lower is better)
Translates to: CESAGAGGRVGG*WALRTGSRSVA
Trigger: TGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 72 bp TGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTaGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGT +
Preference number: 3 (lower is better)
Translates to: CLRVCRGGRARR*LLGLAHGESLG
Trigger: ACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR GCA 72 bp AGCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGC +
Preference number: 3 (lower is better)
Translates to: SRVNKPGRLDPA*ESAGAGGRVGG
Trigger: GCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 72 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCGCCTCCATCGATGTGG +
Preference number: 3 (lower is better)
Translates to: EPARSPFAPARR*TRCSSSPPSMW
Trigger: CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
3UTR TCA 72 bp AGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATAAACCTGGACGCTTGG +
Preference number: 3 (lower is better)
Translates to: SYVITHGEEKEE*DPAGSINLDAW
Trigger: CCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CCA 72 bp AGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTaGCGGGCAACCTGGACTACAAGGCGCTCAGCTACG +
Preference number: 3 (lower is better)
Translates to: RWTRCSSSPPSM*RATWTTRRSAT
Trigger: CGTAGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503156.5
3UTR CAA 72 bp GCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTaGCGCACGGGGAGTCGCTCGGTGGCAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGAGGRVGGCWA*RTGSRSVAGWV
Trigger: CACCCAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp GGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCAGGCGTCCACACCCGGCCCTaGGTCTGCGCCGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: GRVGGCWALRTGSRSVAGVHTRP*VCAAHG
Trigger: GCCGTGGGCGGCGCAGACTCAGGGCCGGGTGTGGAC...GCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp GCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGCGCGTCGGTGGCTGCTaGGCCTTGCGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASLPGREGASVAAGPCARRVGGC*ALRTGS
Trigger: ACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCG...CCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp CTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCACTCCGGAGTCGCCGTaGTGGGCCCCAGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: LPASLPGREGASVAAGPCTPESP*WAPGPQ
Trigger: CTGGGGTCCTGGGGCCCAGCACGGCGACTCCGGAGT...GCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp CTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LRVCRGGRARRWLLGLAHPPAGR*TRTAPS
Trigger: GCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGG...GTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp TGGACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: WTLPASLPGREGASVAAGGSSPC*QVDKDG
Trigger: GCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCC...CCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp GCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASLPGREGASVAAGPCARIQELL*GGAGSP
Trigger: GGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGAT...CCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTGTCCACACCCGGCCCTaGGTCTGCGCCGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSVHTRP*VCAAHG
Trigger: GCCGTGGGCGGCGCAGACTCAGGGCCGGGTGTGGAC...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGARKEPFRPRPQVDQMFRLDPA*ESAGAG
Trigger: TCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCG...GAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATTCTCTGAGGTGGAGCTaGCAGCCCCGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RSRSPQGALSPPPAGGPDSLRWS*QPRQRA
Trigger: CGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGA...ATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp TGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGCGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CNSLPEPARSPFAPARRWRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...CCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp AGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGATGGCTGGAGAGAAGATaGCCAGGCTCTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLPGREGASVAAGPCARGWLERR*PGSGQG
Trigger: CCCTTGCCCAGAGCCTGGTCATCTTCTCTCCAGCCA...TCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp GTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTGTCCTCACCCTTCTTaGCCAGCACAGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: VCRGGRARRWLLGLAHGECPHPS*PAQGTA
Trigger: TGCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACA...CTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp TGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACTCCGGAGTCGCCGTaGTGGGCCCCAGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: CNSLPEPARSPFAPARRWTPESP*WAPGPQ
Trigger: CTGGGGTCCTGGGGCCCAGCACGGCGACTCCGGAGT...CCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR GCA 90 bp CTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTGGACGCTTGGACCCTaGCTGCGAGTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPEPARSPFAPARRWTRCWTLGP*LRVCRG
Trigger: GCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCA...ACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCGGCTCCCGGGCCCTCTaGGGTCCTCTAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RKEPFRPRPQVDQMFQFAGSRAL*GPLARP
Trigger: GGGCCTCGCTAGAGGACCCCAGAGGGCCCGGGAGCC...GGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTGCGAGTCTGCCGGGGCGGGGCTCCCGGGCCCTCTaGGGTCCTCTAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGSINLDAWTLPASLPGRGSRAL*GPLARP
Trigger: GGGCCTCGCTAGAGGACCCCAGAGGGCCCGGGAGCC...CCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp AGGTGCGCGCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RCALVIRSRSPQGALSPPRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...CGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGCGCGCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCAGGCTCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRVGGCWALRTGSRSVAGSWWPQ*SAWSGP
Trigger: TGGACCGGACCAAGCACTTCACTGAGGCCACCAAGA...GCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp CTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTCCGCCAGGATGCAGCTaGAGAAGGTGCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPEPARSPFAPARRWTRCPPGCS*RRCTGR
Trigger: CCGGCCTGTGCACCTTCTTCAGCTGCATCCTGGCGG...ACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp CTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: LRVCRGGRARRWLLGLAHEEKEE*DPAGSI
Trigger: TATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTC...GTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp CGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTCGCTCGGTGGCAGGCTGGGTAGGCGCTCAGCTACGTaGTCACCCACGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRWLLGLAHGESLGGRLGRRSAT*SPTGRR
Trigger: TCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCT...ACCCAGCCTGCCACCGAGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp TGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGGACCCCAGCCCTTCCTaGTCCCCCTCGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: CNSLPEPARSPFAPARRWDPSPS*SPSVHT
Trigger: GGTGTGGACCGAGGGGGAGCAGGAAGGGCTGGGGTC...CCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp ACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTAAGATGACCAGGCTCTaGGCAAGGGCACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLPASLPGREGASVAAGPKMTRL*ARAQRL
Trigger: GAGCCTCTGTGCCCTTGCCCAGAGCCTGGTCATCTT...AGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCCGGCAGAGGGCGGGGTaGGGGGCACACTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGRQRAG*GAHSPT
Trigger: TGTGGGAGAGTGTGCCCCCCACCCCGCCCTCTGCCG...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCGGCAGAGGGCGGGGTaGGGGGCACACTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PQGALSPPPAGGPDVPVRRQRAG*GAHSPT
Trigger: TGTGGGAGAGTGTGCCCCCCACCCCGCCCTCTGCCG...GCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGCGACCGCCAACTCCATaGCCACGGGGCCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: GARKEPFRPRPQVDQMFQRPPTP*PRGPPR
Trigger: TCTCGGTGGGCCCCGTGGCCATGGAGTTGGCGGTCG...CTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCAGGCTCCCGGGCCCTCTaGGGTCCTCTAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPGSRAL*GPLARP
Trigger: GGGCCTCGCTAGAGGACCCCAGAGGGCCCGGGAGCC...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGACGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGCGCGTCGGTGGCTGCTaGGCCTTGCGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: APARRWTRCSSSPPSMWRRVGGC*ALRTGS
Trigger: ACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCG...CCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGACGCTTGGACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCAGCTGTCCAGTCAAGTaGATCCTCCCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GRLDPACESAGAGGRVGGSCPVK*ILPLLA
Trigger: TGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCT...GCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp CTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTCTGCTCCAGGAGGGCTaGGAAGCTGGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: LPEPARSPFAPARRWTRCLLQEG*EAGRDP
Trigger: GGGATCTCTGCCAGCTTCTCAGCCCTCCTGGAGCAG...ACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp TCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCGCCAGGATGCAGCTaGAGAAGGTGCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRSPQGALSPPPAGGPDVPPGCS*RRCTGR
Trigger: CCGGCCTGTGCACCTTCTTCAGCTGCATCCTGGCGG...AACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGTCCACACCCGGCCCTaGGTCTGCGCCGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLVHTRP*VCAAHG
Trigger: GCCGTGGGCGGCGCAGACTCAGGGCCGGGTGTGGAC...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp TTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGTCCACACCCGGCCCTaGGTCTGCGCCGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: FRPRPQVDQMFQFASIDVVHTRP*VCAAHG
Trigger: GCCGTGGGCGGCGCAGACTCAGGGCCGGGTGTGGAC...CACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGGCGCTCAGCTACGTaGTCACCCACGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PEPARSPFAPARRWTRCSRRSAT*SPTGRR
Trigger: TCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCT...GGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR GCA 90 bp TCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SAGAGGRVGGCWALRTGSASHSQ*RHCQHD
Trigger: ATCATGCTGGCAATGACGGCACTGACTGTGCGACGC...ACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp CGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGTCCCCAGACTCGGCCTaGAGGCGCCGGTATGGGGTG +
Preference number: 4 (lower is better)
Translates to: RPRPQVDQMFQFASIDVASPDSA*RRRYGV
Trigger: CACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA...CGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGACCCCAGCCCTTCCTaGTCCCCCTCGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: RPRPQVDQMFQFASIDVADPSPS*SPSVHT
Trigger: GGTGTGGACCGAGGGGGAGCAGGAAGGGCTGGGGTC...CGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTACTCCGGAGTCGCCGTaGTGGGCCCCAGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPTPESP*WAPGPQ
Trigger: CTGGGGTCCTGGGGCCCAGCACGGCGACTCCGGAGT...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCACGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPRLDPA*ESAGAG
Trigger: TCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCG...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTGGACGCTTGGACCCTaGCTGCGAGTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSWTLGP*LRVCRG
Trigger: GCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCA...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp GAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCCGGCAGAGGGCGGGGTaGGGGGCACACTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: EPFRPRPQVDQMFQFASIRQRAG*GAHSPT
Trigger: TGTGGGAGAGTGTGCCCCCCACCCCGCCCTCTGCCG...GATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCTCTCTGAGGTGGAGCTaGCAGCCCCGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGSLRWS*QPRQRA
Trigger: CGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGA...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCCGACCGCCAACTCCATaGCCACGGGGCCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: RKEPFRPRPQVDQMFQFARPPTP*PRGPPR
Trigger: TCTCGGTGGGCCCCGTGGCCATGGAGTTGGCGGTCG...GGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGCGACCGCCAACTCCATaGCCACGGGGCCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: RPRPQVDQMFQFASIDVARPPTP*PRGPPR
Trigger: TCTCGGTGGGCCCCGTGGCCATGGAGTTGGCGGTCG...CGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGCGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPEPARSPFAPARRWTRCIQELL*GGAGSP
Trigger: GGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGAT...ACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GTGCGCGCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCTGCTCCAGGAGGGCTaGGAAGCTGGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: VRACNSLPEPARSPFAPALLQEG*EAGRDP
Trigger: GGGATCTCTGCCAGCTTCTCAGCCCTCCTGGAGCAG...GGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGCGCGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: APGARKEPFRPRPQVDQMSWWPQ*SAWSGP
Trigger: TGGACCGGACCAAGCACTTCACTGAGGCCACCAAGA...CATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR GCA 90 bp CCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCCATGCAGGGCACCATaGGTAGCACACTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: PGARKEPFRPRPQVDQMFPCRAP*VAHSRQ
Trigger: TTGCCGGGAGTGTGCTACGCATGGTGCCCTGCATGG...GAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR GCA 90 bp CCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGGGGGCCGAGAGCCAGTaGCCCCAGGATCCCAAACGT +
Preference number: 4 (lower is better)
Translates to: PPPAGGPDVPVRLHRCGGGAESQ*PQDPKR
Trigger: ACGTTTGGGATCCTGGGGGCACTGGCTCTCGGCCCC...CCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGCAAGGGTCTGTCCCTaGAGCTGGGACACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSPQGALSPPPAGGPDVPARVCP*SWDTRA
Trigger: TGCCCTGGTGTCCCAGCTGCAGGGACAGACCCTTGC...TGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR GCA 90 bp TCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCTCCCCAGACTCGGCCTaGAGGCGCCGGTATGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPPPAGGPDVPVRLHRCGSPDSA*RRRYGV
Trigger: CACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA...GCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGGACCCCAGCCCTTCCTaGTCCCCCTCGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSDPSPS*SPSVHT
Trigger: GGTGTGGACCGAGGGGGAGCAGGAAGGGCTGGGGTC...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCACCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPPPAGR*TRTAPS
Trigger: GCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGG...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: ARKEPFRPRPQVDQMFQFGSSPC*QVDKDG
Trigger: GCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCC...GAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGCTCCCGGGCCCTCTaGGGTCCTCTAGCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPGSRAL*GPLARP
Trigger: GGGCCTCGCTAGAGGACCCCAGAGGGCCCGGGAGCC...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGCGGGGAGTCGCTCGGTaGCAGGCTGGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLRGVAR*QAGWGL
Trigger: GAGCCCCCACCCAGCCTGCCACCGAGCGACTCCCCG...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGCGACGCCAGCAGGGATaGTATAGACACCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: ACNSLPEPARSPFAPARRRRQQG*YRHRAP
Trigger: CGGCGCTCGGTGTCTATACCATCCCTGCTGGCGTCG...CCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347950.9
3UTR CAA 72 bp GGAGTGAGACCCAGCCGGGTCAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVRPSRVNKPGR*DPACESAGAGG
Trigger: CCCTCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR TCA 90 bp CGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCCTGCTCCAGGAGGGCTaGGAAGCTGGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: RKEPFRPRPQVDQMFQFALLQEG*EAGRDP
Trigger: GGGATCTCTGCCAGCTTCTCAGCCCTCCTGGAGCAG...GGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCGTCCACACCCGGCCCTaGGTCTGCGCCGCCCACGGC +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALVHTRP*VCAAHG
Trigger: GCCGTGGGCGGCGCAGACTCAGGGCCGGGTGTGGAC...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTGCAAGGGTCTGTCCCTaGAGCTGGGACACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSARVCP*SWDTRA
Trigger: TGCCCTGGTGTCCCAGCTGCAGGGACAGACCCTTGC...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACGACCCCAGCCCTTCCTaGTCCCCCTCGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNDPSPS*SPSVHT
Trigger: GGTGTGGACCGAGGGGGAGCAGGAAGGGCTGGGGTC...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGCGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FRPRPQVDQMFQFASIDVRLDPA*ESAGAG
Trigger: TCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCG...CACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGTGGACGCTTGGACCCTaGCTGCGAGTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWWTLGP*LRVCRG
Trigger: GCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCA...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTGCGAGTCTGCCGGGGCGGGGCTCGCTGGTGCTCTaGGAACCACAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGSINLDAWTLPASLPGRGSLVL*EPQGSQ
Trigger: CTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCC...CCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp TCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCAGGGGACAGCACATTaGCCACAAGGACGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SRSPQGALSPPPAGGPDVQGTAH*PQGRPE
Trigger: CTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCCCTG...AACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR CCA 90 bp AGGTGCGCGCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCACAGGCAGATGGTaGACAGCAGGCAGACGACGC +
Preference number: 4 (lower is better)
Translates to: RCALVIRSRSPQGALSPPPTGRW*TAGRRR
Trigger: GCGTCGTCTGCCTGCTGTCCACCATCTGCCTGTGGG...CGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGCGCGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCCCCACAGGCAGATGGTaGACAGCAGGCAGACGACGC +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGPTGRW*TAGRRR
Trigger: GCGTCGTCTGCCTGCTGTCCACCATCTGCCTGTGGG...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCCACAGGCAGATGGTaGACAGCAGGCAGACGACGC +
Preference number: 4 (lower is better)
Translates to: PARSPFAPARRWTRCSSSPTGRW*TAGRRR
Trigger: GCGTCGTCTGCCTGCTGTCCACCATCTGCCTGTGGG...CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp GCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGGGCCGGAAAACCCACTaGAGTGGCCGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: ACNSLPEPARSPFAPARRGRKTH*SGRLHR
Trigger: TCTGTGCAAGCGGCCACTCCAGTGGGTTTTCCGGCC...CCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATCGACCGCCAACTCCATaGCCACGGGGCCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: PFRPRPQVDQMFQFASIDRPPTP*PRGPPR
Trigger: TCTCGGTGGGCCCCGTGGCCATGGAGTTGGCGGTCG...ATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ARRWTRCSSSPPSMWRATPPAGR*TRTAPS
Trigger: GCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGG...GGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWPPAGR*TRTAPS
Trigger: GCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGG...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: QGALSPPPAGGPDVPVRLGSSPC*QVDKDG
Trigger: GCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCC...GAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GTGCGCGCTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: VRACNSLPEPARSPFAPARRYGV*KKTARM
Trigger: CATCCTGGCGGTCTTCTTCCACACCCCATACCGGCG...GGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAGCGCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCTGCAGGCGCCGGTATaGGGTGTGGAAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: PARSPFAPARRWTRCSSSLQAPV*GVEEDR
Trigger: GCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAG...CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCTGCAGGCGCCGGTATaGGGTGTGGAAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: PPPAGGPDVPVRLHRCGGLQAPV*GVEEDR
Trigger: GCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAG...CCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGATAAACCTGGACGCTTaGACCCTGCCTGCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: APGARKEPFRPRPQVDQMINLDA*TLPASL
Trigger: CAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTAT...CATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCATGTGGCGGGCAACCTaGACTACAAGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PEPARSPFAPARRWTRCSMWRAT*TTRRSA
Trigger: AGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACAT...GGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCACCACAGGTGCAAAGCTaGGCCACAGCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PARRWTRCSSSPPSMWRAPQVQS*ATAWRW
Trigger: CCAACGCCACGCTGTGGCTCAGCTTTGCACCTGTGG...TGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp AATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCCCAGTGACAGCCAGTTaGTCTGCTCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: NSLPEPARSPFAPARRWTPVTAS*SAPWTG
Trigger: TCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGG...GGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR TCA 90 bp AATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCGGCTCTGGCCACCCATaGGGAAGGCAAATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: NSLPEPARSPFAPARRWTGSGHP*GRQMGF
Trigger: AAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCC...GGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR TCA 90 bp TCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCCTGCTCCAGGAGGGCTaGGAAGCTGGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: SPPPAGGPDVPVRLHRCGLLQEG*EAGRDP
Trigger: GGGATCTCTGCCAGCTTCTCAGCCCTCCTGGAGCAG...GCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCCCGCCAGGATGCAGCTaGAGAAGGTGCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ARRWTRCSSSPPSMWRATPPGCS*RRCTGR
Trigger: CCGGCCTGTGCACCTTCTTCAGCTGCATCCTGGCGG...GGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp GTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGAGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: VIRSRSPQGALSPPPAGGEEKEE*DPAGSI
Trigger: TATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTC...TCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: GARKEPFRPRPQVDQMFQEEKEE*DPAGSI
Trigger: TATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTC...CTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTAGGCGCTCAGCTACGTaGTCACCCACGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPRRSAT*SPTGRR
Trigger: TCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCT...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAGGCGCTCAGCTACGTaGTCACCCACGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSRRSAT*SPTGRR
Trigger: TCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCT...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCAGCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTGCGAGTCTGCCGGGGCCACAGGTGCAAAGCTaGGCCACAGTCCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAGSINLDAWTLPASLPGPQVQS*ATVREA
Trigger: TGCCTCCCGGACTGTGGCTCAGCTTTGCACCTGTGG...CCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp CCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCCTTGCACAGAGGATCTaGTCCAGGAGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PEPARSPFAPARRWTRCSLAQRI*SRRAEK
Trigger: CTTCTCAGCCCTCCTGGAGCAGATCCTCTGTGCAAG...GGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR GCA 90 bp ACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCC +
Preference number: 4 (lower is better)
Translates to: TLPASLPGREGASVAAGPSQCRH*QHDEYS
Trigger: GGAATACTCATCATGCTGGCAATGACGGCACTGACT...AGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp GCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: ARKEPFRPRPQVDQMFQFSGSSP*WQVDKD
Trigger: GTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACT...GAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PQGALSPPPAGGPDVPVRSGSSP*WQVDKD
Trigger: GTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACT...GCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGSGSSP*WQVDKD
Trigger: GTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACT...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAACTCCGGAGTCGCCGTaGTGGGCCCCAGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGTPESP*WAPGPQ
Trigger: CTGGGGTCCTGGGGCCCAGCACGGCGACTCCGGAGT...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGTGGACGCTTGGACCCTaGCTGCGAGTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLWTLGP*LRVCRG
Trigger: GCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCA...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSSPGSR*PPRQMG
Trigger: CCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACT...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp ACCCTGCCTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTAAGGCAAATGGGTTTTaGGTCCCAACAACCATGCAG +
Preference number: 4 (lower is better)
Translates to: TLPASLPGREGASVAAGPKANGF*VPTTMQ
Trigger: CTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTT...AGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAGGCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp GCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGAGGGCACAGAGGCTCTaGCCACCCATGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: APARRWTRCSSSPPSMWRRAQRL*PPMRKA
Trigger: TGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCT...CCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGAAGATGACCAGGCTCTaGGCAAGGGCACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GARKEPFRPRPQVDQMFQKMTRL*ARAQRL
Trigger: GAGCCTCTGTGCCCTTGCCCAGAGCCTGGTCATCTT...CTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR CCA 90 bp GTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGAGGCAGCCAGCTTGGCTaGAGAGAAGATGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: VIRSRSPQGALSPPPAGGGSQLG*REDDQA
Trigger: AGCCTGGTCATCTTCTCTCCAGCCAAGCTGGCTGCC...TCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR CCA 90 bp GGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATGGCTCGCTGGTGCTCTaGGAACCACAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GALSPPPAGGPDVPVRLHGSLVL*EPQGSQ
Trigger: CTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCC...ATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCCCAGAGGGTTCGACATaGTGGCGAGCATGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGPEGST*WRACWP
Trigger: CGGCCAACATGCTCGCCACCATGTCGAACCCTCTGG...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCGAGCAGCGAGCAGGTaGCAGCCAGGGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNRAASR*QPGQGS
Trigger: AGACCCTTGCCCTGGCTGCCACCTGCTCGCTGCTCG...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RPRPQVDQMFQFASIDVARRYGV*KKTARM
Trigger: CATCCTGGCGGTCTTCTTCCACACCCCATACCGGCG...CGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCTGCAGGCGCCGGTATaGGGTGTGGAAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSLQAPV*GVEEDR
Trigger: GCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAG...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGACGCCAGCAGGGATaGTATAGACACCGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: SPQGALSPPPAGGPDVPVRRQQG*YRHRAP
Trigger: CGGCGCTCGGTGTCTATACCATCCCTGCTGGCGTCG...AACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347950.9
ENST00000515118.5
CDS-3UTR TCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGGCTGGAGAGAAGATaGCCAGGCTCTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRWLERR*PGSGQG
Trigger: CCCTTGCCCAGAGCCTGGTCATCTTCTCTCCAGCCA...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR TCA 90 bp CCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCTGTCCTCACCCTTCTTaGCCAGCACAGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: PQGALSPPPAGGPDVPVRCPHPS*PAQGTA
Trigger: TGCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACA...GCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR TCA 90 bp AGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPQGALSPPPAGGPDVPVIQELL*GGAGSP
Trigger: GGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGAT...AACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRIQELL*GGAGSP
Trigger: GGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGAT...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GALSPPPAGGPDVPVRLHIQELL*GGAGSP
Trigger: GGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGAT...ATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCTCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGSWWPQ*SAWSGP
Trigger: TGGACCGGACCAAGCACTTCACTGAGGCCACCAAGA...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: LVIRSRSPQGALSPPPAGEEKEE*DPAGSI
Trigger: TATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTC...ACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGAGGAGAAGGAGGAGTaGGACCCAGCCGGGTCAATA +
Preference number: 4 (lower is better)
Translates to: ARKEPFRPRPQVDQMFQFEEKEE*DPAGSI
Trigger: TATTGACCCGGCTGGGTCTCACTCCTCCTTCTCCTC...GAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACAGGCGCTCAGCTACGTaGTCACCCACGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNRRSAT*SPTGRR
Trigger: TCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCT...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGACGTCAGCCACAGGTaGAAAGCTGAGCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: RPRPQVDQMFQFASIDVADVSHR*KAEPQR
Trigger: ACGCTGTGGCTCAGCTTTGCACCTGTGGCTGACGTC...CGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCACCATGCAGGGCACCATaGGTAGCACACTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPPCRAP*VAHSRQ
Trigger: TTGCCGGGAGTGTGCTACGCATGGTGCCCTGCATGG...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR GCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATGCAGGGCACCATaGGTAGCACACTCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPPCRAP*VAHSRQ
Trigger: TTGCCGGGAGTGTGCTACGCATGGTGCCCTGCATGG...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR GCA 90 bp GCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGGGTCCCAACAACCATaGAGGGCACCATGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: ARKEPFRPRPQVDQMFQFGSQQP*RAPCVA
Trigger: TGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCC...GAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR GCA 90 bp CTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGGGCCGAGAGCCAGTaGCCCCAGGATCCCAAACGT +
Preference number: 4 (lower is better)
Translates to: LSPPPAGGPDVPVRLHRCGAESQ*PQDPKR
Trigger: ACGTTTGGGATCCTGGGGGCACTGGCTCTCGGCCCC...ACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCACCAGCACAAAGATCATaGCTGTGGCAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPPAQRS*LWQPPP
Trigger: GGGAGGGGGCTGCCACAGGCATGATCTTTGTGCTGG...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAGTCCCCAGACTCGGCCTaGAGGCGCCGGTATGGGGTG +
Preference number: 4 (lower is better)
Translates to: VPVRLHRCGGQPGLQGAQSPDSA*RRRYGV
Trigger: CACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA...CTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGACTCCGGAGTCGCCGTaGTGGGCCCCAGGACCCCAG +
Preference number: 4 (lower is better)
Translates to: QMFQFASIDVAGNLDYKATPESP*WAPGPQ
Trigger: CTGGGGTCCTGGGGCCCAGCACGGCGACTCCGGAGT...CGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCCGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALRLDPA*ESAGAG
Trigger: TCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCG...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCCGCTTGGACCCTGCCTaGGAGTCTGCCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RCSSSPPSMWRATWTTRRRLDPA*ESAGAG
Trigger: TCCCGCCCCGGCAGACTCGCAGGCAGGGTCCAAGCG...GCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGATGGACGCTTGGACCCTaGCTGCGAGTCTGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGWTLGP*LRVCRG
Trigger: GCCCCGGCAGACTCGCAGGCAGGGTCCAAGCGTCCA...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCAAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPSPGSR*PPRQMG
Trigger: CCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACT...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTGAGGGTTCGACATGGTaGCGAGCATGTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPEGSTW*RACWPW
Trigger: CCACGGCCAACATGCTCGCCACCATGTCGAACCCTC...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCACAGGGGACAGCACATTaGCCACAAGGACGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PARRWTRCSSSPPSMWRAQGTAH*PQGRPE
Trigger: CTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCCCTG...TGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCCGACGCCAGCAGGGATaGTATAGACACCGAGCATTA +
Preference number: 4 (lower is better)
Translates to: PEPARSPFAPARRWTRCSRRQQG*YRHRAL
Trigger: TAATGCTCGGTGTCTATACCATCCCTGCTGGCGTCG...GGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR CCA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCCCACAGGCAGATGGTaGACAGCAGGCAGACGACGC +
Preference number: 4 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWPTGRW*TAGRRR
Trigger: GCGTCGTCTGCCTGCTGTCCACCATCTGCCTGTGGG...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTCGGCAGAGGGCGGGGTaGGGGGCACACTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: RWTRCSSSPPSMWRATWTRQRAG*GAHSPT
Trigger: TGTGGGAGAGTGTGCCCCCCACCCCGCCCTCTGCCG...AGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCACGGCAGAGGGCGGGGTaGGGGGCACACTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: CSSSPPSMWRATWTTRRSRQRAG*GAHSPT
Trigger: TGTGGGAGAGTGTGCCCCCCACCCCGCCCTCTGCCG...TGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGGAAAACCCACTGGAGTaGCCGCTTGCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GARKEPFRPRPQVDQMFQENPLE*PLAQRI
Trigger: GATCCTCTGTGCAAGCGGCCACTCCAGTGGGTTTTC...CTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAGGCCGGAAAACCCACTaGAGTGGCCGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRGRKTH*SGRLHR
Trigger: TCTGTGCAAGCGGCCACTCCAGTGGGTTTTCCGGCC...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CTGGACTACAAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGCGACCGCCAACTCCATaGCCACGGGGCCCACCGAGA +
Preference number: 4 (lower is better)
Translates to: LDYKALSYVITHGEEKEERPPTP*PRGPPR
Trigger: TCTCGGTGGGCCCCGTGGCCATGGAGTTGGCGGTCG...CTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCTTGTAGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLGSSPC*QVDKDG
Trigger: GCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCC...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGC +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPGSSPC*QVDKDG
Trigger: GCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCC...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGACGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRRRYGV*KKTARM
Trigger: CATCCTGGCGGTCTTCTTCCACACCCCATACCGGCG...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GALSPPPAGGPDVPVRLHRRYGV*KKTARM
Trigger: CATCCTGGCGGTCTTCTTCCACACCCCATACCGGCG...ATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSRRYGV*KKTARM
Trigger: CATCCTGGCGGTCTTCTTCCACACCCCATACCGGCG...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCACGCGTCGGTGGCTGCTaGGCCTTGCGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: CSSSPPSMWRATWTTRRSRVGGC*ALRTGS
Trigger: ACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCG...TGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: RRWTRCSSSPPSMWRATWAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...CCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTCCAAGTCCTCAGCAATaGCGTCAGCCACAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSPSPQQ*RQPQVQ
Trigger: TTGCACCTGTGGCTGACGTCATTGCTGAGGACTTGG...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCCACGAGGTAGACCAGTaGCAGCCAGTTGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGHEVDQ*QPVDLL
Trigger: GAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTG...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp AGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTTGTCCTCACCCTTCTTaGCCAGCACAGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SPQGALSPPPAGGPDVPVCPHPS*PAQGTA
Trigger: TGCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACA...AACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR TCA 90 bp GGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGAGCACACAGCCAGGATaGCATAGGCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: GARKEPFRPRPQVDQMFQSTQPG*HRPCST
Trigger: TGTGGAACAAGGCCTATGTCATCCTGGCTGTGTGCT...CTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR TCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCACGAGGTAGACCAGTaGCAGCCAGTTGATCGTGGC +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSHEVDQ*QPVDRG
Trigger: GCCACGATCAACTGGCTGTCACTGGTCTACCTCGTG...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347950.9
CDS-3UTR GCA 90 bp AGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCAGGGTCCCAACAACCATaGAGGGCACCATGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: RSPFAPARRWTRCSSSPPGSQQP*RAPCVA
Trigger: TGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCC...TGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR GCA 90 bp CGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGGCAAGGGTCTGTCCCTaGAGCTGGGACACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RRWTRCSSSPPSMWRATWARVCP*SWDTRA
Trigger: TGCCCTGGTGTCCCAGCTGCAGGGACAGACCCTTGC...CCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: PPPAGGPDVPVRLHRCGGASHSQ*RHCQHD
Trigger: ATCATGCTGGCAATGACGGCACTGACTGTGCGACGC...CCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTTTGTTCCACATGAGCTaGAGCTTGAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SRSPQGALSPPPAGGPDVLFHMS*SLSPSR
Trigger: CCTGGATGGGCTCAAGCTGCAGCTCATGTGGAACAA...AACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CCA 90 bp CCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCCACGCCAAATGGGGTaGATACCACGAGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: PQGALSPPPAGGPDVPVRPRQMG*IPRGRP
Trigger: TGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGG...GCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCACGCCAAATGGGGTaGATACCACGAGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: PARSPFAPARRWTRCSSSPRQMG*IPRGRP
Trigger: TGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGG...CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMSPGSR*PPRQMG
Trigger: CCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACT...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCAAGATGACCAGGCTCTaGGCAAGGGCACAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KEPFRPRPQVDQMFQFASKMTRL*ARAQRL
Trigger: GAGCCTCTGTGCCCTTGCCCAGAGCCTGGTCATCTT...GGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp AAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCGGCAGCCAGCTTGGCTaGAGAGAAGATGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KEPFRPRPQVDQMFQFASGSQLG*REDDQA
Trigger: AGCCTGGTCATCTTCTCTCCAGCCAAGCTGGCTGCC...GGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCCAGGGGACAGCACATTaGCCACAAGGACGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ARRWTRCSSSPPSMWRATQGTAH*PQGRPE
Trigger: CTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCCCTG...GGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp AGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCTCTGAGGTGGAGCTaGCAGCCCCGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RCSSSPPSMWRATWTTRRSLRWS*QPRQRA
Trigger: CGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGA...GCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTATCTCTGAGGTGGAGCTaGCAGCCCCGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GGPDVPVRLHRCGGQPGLSLRWS*QPRQRA
Trigger: CGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGA...TAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTGAAAACCCACTGGAGTaGCCGCTTGCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: EPARSPFAPARRWTRCSSENPLE*PLAQRI
Trigger: GATCCTCTGTGCAAGCGGCCACTCCAGTGGGTTTTC...ACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACGAGCAGCGAGCAGGTaGCAGCCAGGGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGRAASR*QPGQGS
Trigger: AGACCCTTGCCCTGGCTGCCACCTGCTCGCTGCTCG...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCACTGTCCAGTCAAGTaGATCCTCCCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSHCPVK*ILPLLA
Trigger: TGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTG...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp GGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCACTGTCCAGTCAAGTaGATCCTCCCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GALSPPPAGGPDVPVRLHHCPVK*ILPLLA
Trigger: TGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTG...ATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCGTCGGTGGCTGCTaGGCCTTGCGCACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRRVGGC*ALRTGS
Trigger: ACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCG...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGATAAACCTGGACGCTTaGACCCTGCCTGCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PARSPFAPARRWTRCSSSINLDA*TLPASL
Trigger: CAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTAT...CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCATAAACCTGGACGCTTaGACCCTGCCTGCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PQGALSPPPAGGPDVPVRINLDA*TLPASL
Trigger: CAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTAT...GCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTTCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCTCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 4 (lower is better)
Translates to: KEPFRPRPQVDQMFQFASSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...GGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGCCAAGTCCTCAGCAATaGCGTCAGCCACAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSPSPQQ*RQPQVQ
Trigger: TTGCACCTGTGGCTGACGTCATTGCTGAGGACTTGG...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCCACGAGGTAGACCAGTaGCAGCCAGTTGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: EPFRPRPQVDQMFQFASIHEVDQ*QPVDLL
Trigger: GAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTG...GATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCACGAGGTAGACCAGTaGCAGCCAGTTGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGALSPPPAGGPDVPVRLHEVDQ*QPVDLL
Trigger: GAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTG...GAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCGGCTCTGGCCACCCATaGGGAAGGCAAATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: QGALSPPPAGGPDVPVRLGSGHP*GRQMGF
Trigger: AAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCC...GAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR TCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMSWWPQ*SAWSGP
Trigger: TGGACCGGACCAAGCACTTCACTGAGGCCACCAAGA...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CTTGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGACAGCCAGTTGATCTaGTCCATGGACAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: LVIRSRSPQGALSPPPAGDSQLI*SMDRTK
Trigger: CTTGGTCCTGTCCATGGAGCAGATCAACTGGCTGTC...ACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS-3UTR GCA 90 bp AGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCGGGGCCGAGAGCCAGTaGCCCCAGGATCCCAAACGT +
Preference number: 4 (lower is better)
Translates to: RCSSSPPSMWRATWTTRRGAESQ*PQDPKR
Trigger: ACGTTTGGGATCCTGGGGGCACTGGCTCTCGGCCCC...GCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACGGGGCCGAGAGCCAGTaGCCCCAGGATCCCAAACGT +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYGAESQ*PQDPKR
Trigger: ACGTTTGGGATCCTGGGGGCACTGGCTCTCGGCCCC...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: RRWTRCSSSPPSMWRATWSGSSP*WQVDKD
Trigger: GTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACT...CCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACATCCCCAGACTCGGCCTaGAGGCGCCGGTATGGGGTG +
Preference number: 4 (lower is better)
Translates to: WTRCSSSPPSMWRATWTTSPDSA*RRRYGV
Trigger: CACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA...TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGTCCCCAGACTCGGCCTaGAGGCGCCGGTATGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRSPDSA*RRRYGV
Trigger: CACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGCCGCCACGCCAAATaGGGTGGATACCACGAGGTA +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPGRHAK*GGYHEV
Trigger: TACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCC...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: RRWTRCSSSPPSMWRATWSPGSR*PPRQMG
Trigger: CCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACT...CCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAGGGTTCGACATGGTaGCGAGCATGTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLEGSTW*RACWPW
Trigger: CCACGGCCAACATGCTCGCCACCATGTCGAACCCTC...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTCCAGAGGGTTCGACATaGTGGCGAGCATGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPPEGST*WRACWP
Trigger: CGGCCAACATGCTCGCCACCATGTCGAACCCTCTGG...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCCGACGCCAGCAGGGATaGTATAGACACCGAGCATTA +
Preference number: 4 (lower is better)
Translates to: PRPQVDQMFQFASIDVAGRRQQG*YRHRAL
Trigger: TAATGCTCGGTGTCTATACCATCCCTGCTGGCGTCG...GCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAATCTCTGAGGTGGAGCTaGCAGCCCCGGCAGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQSLRWS*QPRQRA
Trigger: CGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGA...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAGAAAACCCACTGGAGTaGCCGCTTGCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRENPLE*PLAQRI
Trigger: GATCCTCTGTGCAAGCGGCCACTCCAGTGGGTTTTC...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGGCCGGAAAACCCACTaGAGTGGCCGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLGRKTH*SGRLHR
Trigger: TCTGTGCAAGCGGCCACTCCAGTGGGTTTTCCGGCC...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCCGAGCAGCGAGCAGGTaGCAGCCAGGGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGRAASR*QPGQGS
Trigger: AGACCCTTGCCCTGGCTGCCACCTGCTCGCTGCTCG...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCACGAGCAGCGAGCAGGTaGCAGCCAGGGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSSSPPSMWRATWTTRRSRAASR*QPGQGS
Trigger: AGACCCTTGCCCTGGCTGCCACCTGCTCGCTGCTCG...TGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRPPAGR*TRTAPS
Trigger: GCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGG...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCACTGTCCAGTCAAGTaGATCCTCCCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNHCPVK*ILPLLA
Trigger: TGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTG...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp GTGAGACCCAGCCGGGTCAATAAACCTGGACGCTTGGACCCTGCCTGCGAGTCTCTGCAGGCGCCGGTATaGGGTGTGGAAGAAGACCGC +
Preference number: 4 (lower is better)
Translates to: VRPSRVNKPGRLDPACESLQAPV*GVEEDR
Trigger: GCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAG...AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATTGACCCGGCTGGGTCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGATGTGGCGGGCAACCTaGACTACAAGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMMWRAT*TTRRSA
Trigger: AGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACAT...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACATGTGGCGGGCAACCTaGACTACAAGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNMWRAT*TTRRSA
Trigger: AGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACAT...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: CSSSPPSMWRATWTTRRSAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...TGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCCCACAGGTGCAAAGCTaGGCCACAGCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGPQVQS*ATAWRW
Trigger: CCAACGCCACGCTGTGGCTCAGCTTTGCACCTGTGG...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCCAGTGACAGCCAGTTaGTCTGCTCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWPVTAS*SAPWTG
Trigger: TCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGG...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGCCAGTGACAGCCAGTTaGTCTGCTCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMPVTAS*SAPWTG
Trigger: TCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGG...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCAGCACACAGCCAGGATaGCATAGGCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: EPFRPRPQVDQMFQFASISTQPG*HRPCST
Trigger: TGTGGAACAAGGCCTATGTCATCCTGGCTGTGTGCT...GATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTAGCACACAGCCAGGATaGCATAGGCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPSTQPG*HRPCST
Trigger: TGTGGAACAAGGCCTATGTCATCCTGGCTGTGTGCT...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCCTGCTCCAGGAGGGCTaGGAAGCTGGCAGAGATCCC +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGLLQEG*EAGRDP
Trigger: GGGATCTCTGCCAGCTTCTCAGCCCTCCTGGAGCAG...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAACCGCCAGGATGCAGCTaGAGAAGGTGCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQPPGCS*RRCTGR
Trigger: CCGGCCTGTGCACCTTCTTCAGCTGCATCCTGGCGG...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGACGTCAGCCACAGGTaGAAAGCTGAGCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: LSPPPAGGPDVPVRLHRCDVSHR*KAEPQR
Trigger: ACGCTGTGGCTCAGCTTTGCACCTGTGGCTGACGTC...ACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGCTTGCACAGAGGATCTaGTCCAGGAGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMLAQRI*SRRAEK
Trigger: CTTCTCAGCCCTCCTGGAGCAGATCCTCTGTGCAAG...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAGCCAGCACAAAGATCATaGCTGTGGCAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VPVRLHRCGGQPGLQGAQPAQRS*LWQPPP
Trigger: GGGAGGGGGCTGCCACAGGCATGATCTTTGTGCTGG...CTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWASHSQ*RHCQHD
Trigger: ATCATGCTGGCAATGACGGCACTGACTGTGCGACGC...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCTTGTTCCACATGAGCTaGAGCTTGAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SPPPAGGPDVPVRLHRCGLFHMS*SLSPSR
Trigger: CCTGGATGGGCTCAAGCTGCAGCTCATGTGGAACAA...GCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGCAGCCAGCTTGGCTaGAGAGAAGATGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPGSQLG*REDDQA
Trigger: AGCCTGGTCATCTTCTCTCCAGCCAAGCTGGCTGCC...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACGGCTCGCTGGTGCTCTaGGAACCACAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYGSLVL*EPQGSQ
Trigger: CTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCC...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCCCCACAGGCAGATGGTaGACAGCAGGCAGACGACGC +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALPTGRW*TAGRRR
Trigger: GCGTCGTCTGCCTGCTGTCCACCATCTGCCTGTGGG...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGACTACAAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGTGGGCCGGAAAACCCACTaGAGTGGCCGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: GLQGAQLRDHPRGGEGGVGRKTH*SGRLHR
Trigger: TCTGTGCAAGCGGCCACTCCAGTGGGTTTTCCGGCC...CACTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCTTGTAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp CTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTCACTGTCCAGTCAAGTaGATCCTCCCCCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSPPPAGGPDVPVRLHRCHCPVK*ILPLLA
Trigger: TGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTG...ACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGATAAACCTGGACGCTTaGACCCTGCCTGCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMINLDA*TLPASL
Trigger: CAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTAT...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp TTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGATGTGGCGGGCAACCTaGACTACAAGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FRPRPQVDQMFQFASIDVMWRAT*TTRRSA
Trigger: AGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACAT...CACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGATGTGGCGGGCAACCTaGACTACAAGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RRWTRCSSSPPSMWRATWMWRAT*TTRRSA
Trigger: AGCTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACAT...CCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGCCCCCGCCCGCAGGTaGACCAGATGTTCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQAPARR*TRCSSS
Trigger: CGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGC...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp TGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACACCACAGGTGCAAAGCTaGGCCACAGCGTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: WTRCSSSPPSMWRATWTTPQVQS*ATAWRW
Trigger: CCAACGCCACGCTGTGGCTCAGCTTTGCACCTGTGG...TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR TCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGCCAGTGACAGCCAGTTaGTCTGCTCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLPVTAS*SAPWTG
Trigger: TCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGG...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAGTCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPVRLHRCGGQPGLQGAQSWWPQ*SAWSGP
Trigger: TGGACCGGACCAAGCACTTCACTGAGGCCACCAAGA...CTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTCTTGCACAGAGGATCTaGTCCAGGAGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPLAQRI*SRRAEK
Trigger: CTTCTCAGCCCTCCTGGAGCAGATCCTCTGTGCAAG...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCAAGGGTCTGTCCCTaGAGCTGGGACACCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DQMFQFASIDVAGNLDYKARVCP*SWDTRA
Trigger: TGCCCTGGTGTCCCAGCTGCAGGGACAGACCCTTGC...CTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACCCAGCACAAAGATCATaGCTGTGGCAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYPAQRS*LWQPPP
Trigger: GGGAGGGGGCTGCCACAGGCATGATCTTTGTGCTGG...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTCCAGCACAAAGATCATaGCTGTGGCAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RWTRCSSSPPSMWRATWTPAQRS*LWQPPP
Trigger: GGGAGGGGGCTGCCACAGGCATGATCTTTGTGCTGG...AGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGSGSSP*WQVDKD
Trigger: GTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACT...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTTGTTCCACATGAGCTaGAGCTTGAGCCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: PFAPARRWTRCSSSPPSMLFHMS*SLSPSR
Trigger: CCTGGATGGGCTCAAGCTGCAGCTCATGTGGAACAA...CATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp CTGGACTACAAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGGACGTCAGCCACAGGTaGAAAGCTGAGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: LDYKALSYVITHGEEKEEDVSHR*KAEPQS
Trigger: GGACTGTGGCTCAGCTTTGCACCTGTGGCTGACGTC...CTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCTTGTAGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR GCA 90 bp CTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTAGAAGACCGCCAGGATaGAGCTGTCCAGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSPPPAGGPDVPVRLHRCRRPPG*SCPVKW
Trigger: CCACTTGACTGGACAGCTGCATCCTGGCGGTCTTCT...ACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CCA 90 bp GGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTAAGGGCACAGAGGCTCTaGCCACCCATGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGPDVPVRLHRCGGQPGLRAQRL*PPMRKA
Trigger: TGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCT...TAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGAGGGCACAGAGGCTCTaGCCACCCATGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QMFQFASIDVAGNLDYKARAQRL*PPMRKA
Trigger: TGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCT...CGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCCCAGAGGGTTCGACATaGTGGCGAGCATGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGPEGST*WRACWP
Trigger: CGGCCAACATGCTCGCCACCATGTCGAACCCTCTGG...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCCGACGCCAGCAGGGATaGTATAGACACCGAGCATTA +
Preference number: 4 (lower is better)
Translates to: ARRWTRCSSSPPSMWRATRRQQG*YRHRAL
Trigger: TAATGCTCGGTGTCTATACCATCCCTGCTGGCGTCG...GGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTAGGCCGGAAAACCCACTaGAGTGGCCGCTTGCACAGA +
Preference number: 4 (lower is better)
Translates to: GGPDVPVRLHRCGGQPGLGRKTH*SGRLHR
Trigger: TCTGTGCAAGCGGCCACTCCAGTGGGTTTTCCGGCC...TAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAATGGCTGGAGAGAAGATaGCCAGGCTCTGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQWLERR*PGSGQG
Trigger: CCCTTGCCCAGAGCCTGGTCATCTTCTCTCCAGCCA...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR TCA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGAGCACACAGCCAGGATaGCATAGGCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLSTQPG*HRPCST
Trigger: TGTGGAACAAGGCCTATGTCATCCTGGCTGTGTGCT...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACCTTGCACAGAGGATCTaGTCCAGGAGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QVDQMFQFASIDVAGNLDLAQRI*SRRAEK
Trigger: CTTCTCAGCCCTCCTGGAGCAGATCCTCTGTGCAAG...GTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGCCAGCACAAAGATCATaGCTGTGGCAGCCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DQMFQFASIDVAGNLDYKPAQRS*LWQPPP
Trigger: GGGAGGGGGCTGCCACAGGCATGATCTTTGTGCTGG...CTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACCACGCCAAATGGGGTaGATACCACGAGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGPRQMG*IPRGRP
Trigger: TGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGG...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAAGGCAAATGGGTTTTaGGTCCCAACAACCATGCAG +
Preference number: 4 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSKANGF*VPTTMQ
Trigger: CTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTT...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGAGGGTTCGACATGGTaGCGAGCATGTTGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQEGSTW*RACWPW
Trigger: CCACGGCCAACATGCTCGCCACCATGTCGAACCCTC...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAGGAAAACCCACTGGAGTaGCCGCTTGCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: VPVRLHRCGGQPGLQGAQENPLE*PLAQRI
Trigger: GATCCTCTGTGCAAGCGGCCACTCCAGTGGGTTTTC...CTGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCTCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp CAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCACGAGGTAGACCAGTaGCAGCCAGTTGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: QMFQFASIDVAGNLDYKAHEVDQ*QPVDLL
Trigger: GAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTG...CGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR TCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCGGCTCTGGCCACCCATaGGGAAGGCAAATGGGTTTT +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALGSGHP*GRQMGF
Trigger: AAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCC...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR TCA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAAGCACACAGCCAGGATaGCATAGGCCTTGTTCCACA +
Preference number: 4 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGSTQPG*HRPCST
Trigger: TGTGGAACAAGGCCTATGTCATCCTGGCTGTGTGCT...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGACGTCAGCCACAGGTaGAAAGCTGAGCCACAGCGT +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQDVSHR*KAEPQR
Trigger: ACGCTGTGGCTCAGCTTTGCACCTGTGGCTGACGTC...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR GCA 90 bp TGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAGGGTCCCAACAACCATaGAGGGCACCATGCGTAGCA +
Preference number: 4 (lower is better)
Translates to: WTRCSSSPPSMWRATWTTGSQQP*RAPCVA
Trigger: TGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCC...TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR GCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACCTTGCACAGAGGATCTaGTCCAGGAGGGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYLAQRI*SRRAEK
Trigger: CTTCTCAGCCCTCCTGGAGCAGATCCTCTGTGCAAG...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp AGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: RCSSSPPSMWRATWTTRRASHSQ*RHCQHD
Trigger: ATCATGCTGGCAATGACGGCACTGACTGTGCGACGC...GCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCCACGCCAAATGGGGTaGATACCACGAGGTAGACCA +
Preference number: 4 (lower is better)
Translates to: DVPVRLHRCGGQPGLQGAPRQMG*IPRGRP
Trigger: TGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGG...AGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACATAAACCTGGACGCTTaGACCCTGCCTGCGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VDQMFQFASIDVAGNLDYINLDA*TLPASL
Trigger: CAGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTAT...GTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAATCGCCTCCATCGATGTaGCGGGCAACCTGGACTACA +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQSPPSM*RATWTT
Trigger: TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGA...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCGACAGCCAGTTGATCTaGTCCATGGACAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALDSQLI*SMDRTK
Trigger: CTTGGTCCTGTCCATGGAGCAGATCAACTGGCTGTC...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGAAAACCCACTGGAGTaGCCGCTTGCACAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQENPLE*PLAQRI
Trigger: GATCCTCTGTGCAAGCGGCCACTCCAGTGGGTTTTC...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp GGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTAAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCC +
Preference number: 4 (lower is better)
Translates to: GGPDVPVRLHRCGGQPGLSQCRH*QHDEYS
Trigger: GGAATACTCATCATGCTGGCAATGACGGCACTGACT...TAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp TGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCAAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCC +
Preference number: 4 (lower is better)
Translates to: CSSSPPSMWRATWTTRRSSQCRH*QHDEYS
Trigger: GGAATACTCATCATGCTGGCAATGACGGCACTGACT...TGAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR GCA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCC +
Preference number: 4 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGSQCRH*QHDEYS
Trigger: GGAATACTCATCATGCTGGCAATGACGGCACTGACT...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp GATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTAAGGCAAATGGGTTTTaGGTCCCAACAACCATGCAG +
Preference number: 4 (lower is better)
Translates to: DVPVRLHRCGGQPGLQGAKANGF*VPTTMQ
Trigger: CTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTT...AGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp GATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCATGAGGAAGGCAAATaGGTTTTGGGTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: DVPVRLHRCGGQPGLQGAHEEGK*VLGPNN
Trigger: GTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATG...AGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CCA 90 bp ATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCCATGAGGAAGGCAAATaGGTTTTGGGTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: MFQFASIDVAGNLDYKALHEEGK*VLGPNN
Trigger: GTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATG...GAGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR GCA 90 bp GGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCC +
Preference number: 4 (lower is better)
Translates to: GPDVPVRLHRCGGQPGLQSQCRH*QHDEYS
Trigger: GGAATACTCATCATGCTGGCAATGACGGCACTGACT...TTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CCA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCATGAGGAAGGCAAATaGGTTTTGGGTCCCAACAAC +
Preference number: 4 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRHEEGK*VLGPNN
Trigger: GTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATG...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS CCA 90 bp CCACGGGGCCCACCGAGAAGCCAAACAGCCCGAGCAGCGAGCAGGTaGCAGCCAGGGCAAGGGTCTGTCCCTGCAGCTGGGACACCAGGG +
Preference number: 5 (lower is better)
Translates to: PRGPPRSQTARAASR*QPGQGSVPAAGTPG
Trigger: CCCTGGTGTCCCAGCTGCAGGGACAGACCCTTGCCCTGGCTGCCACCTGCTCGCTGCTCGGGCTGTTTGGCTTCTCGGTGGGCCCCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512249.1
ENST00000512400.1
ENST00000515118.5
CDS-3UTR CAA 90 bp CCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACGGGGAGTCGCTACCAGTGACAGCCAGTaGATCTGCTCCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: PGREGASVAAGPCARGVATSDSQ*ICSMDR
Trigger: CCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGT...AGCGACTCCCCGTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CAA 90 bp CCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGC +
Preference number: 5 (lower is better)
Translates to: PGARKEPFRPRPQVDQMFVALEQ*SRLIAS
Trigger: GCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCAC...GAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
CDS-3UTR CAA 90 bp CTGCGAGTCTGCCGGGGCGGGAGGGCGCGTCGGTGGCTGCTGGGCCTTGCGCACAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: LRVCRGGRARRWLLGLAHNKPGR*DPACES
Trigger: AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATT...GTGCGCAAGGCCCAGCAGCCACCGACGCGCCCTCCCGCCCCGGCAGACTCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS CCA 90 bp GCCAGCTTGGCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGTAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: ASLAPHGARRSPGSR*PPRQMGWIPRGRPV
Trigger: CACTGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGCCAAGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513740.1
CDS-3UTR CAA 90 bp ATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAATGTCCTCACCCTTCTaGACCAGCACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: IRSRSPQGALSPPPAGGPMSSPF*TSTGDS
Trigger: GCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACAT...TGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS CCA 90 bp CCAGGATGGTCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGTAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: PGWSPHGARRSPGSR*PPRQMGWIPRGRPV
Trigger: CACTGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGACCATCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp AGACACCGAGCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGTAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: RHRAPHGARRSPGSR*PPRQMGWIPRGRPV
Trigger: CACTGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGCTCGGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347950.9
ENST00000515118.5
CDS CCA 90 bp GACCGCCAGGATGCAGCTGTCCAGTCAAGTGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: DRQDAAVQSSGSSPC*QVDKDGSERRTVSA
Trigger: GGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCTGCATCCTGGCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CAA 90 bp GCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGAGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGC +
Preference number: 5 (lower is better)
Translates to: ALSPPPAGGPDVPVRLHRVALEQ*SRLIAS
Trigger: GCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCAC...TCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp TCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGC +
Preference number: 5 (lower is better)
Translates to: SPPPAGGPDVPVRLHRCGVALEQ*SRLIAS
Trigger: GCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCAC...GCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp TGTAATTCGCTCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGTGACAGCCAGTaGATCGTGGCGTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CNSLPEPARSPFAPARRWTSDSQ*IVALEQ
Trigger: CTGCTCCAACGCCACGATCAACTGGCTGTCACTGGT...CCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGAGCGAATTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347950.9
CDS CCA 90 bp CAAGGACGCCCAGAGGGTTCGACATGGTGGCGAGCATGTTGGCCGTaGCTCGCTGGTGCTCTGGGAACCACAAGGCAGCCAGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: QGRPEGSTWWRACWP*LAGALGTTRQPAWL
Trigger: CAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp TGGCCACAAGGACGCCCAGAGGGTTCGACATGGTGGCGAGCATGTTaGCCGTGGCTCGCTGGTGCTCTGGGAACCACAAGGCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: WPQGRPEGSTWWRAC*PWLAGALGTTRQPA
Trigger: AGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTGTGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp CAGGGGACAGCACATTGGCCACAAGGACGCCCAGAGGGTTCGACATaGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTGCTCTGGGAACC +
Preference number: 5 (lower is better)
Translates to: QGTAHWPQGRPEGST*WRACWPWLAGALGT
Trigger: GGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS TCA 90 bp GCAGGCGCCGGTATGGGGTGTGGAAGAAGACCGCCAGGATGCAGCTaGAGAAGGTGCACAGGCCGGCCATCAGCAGCAGAGACACTGTCC +
Preference number: 5 (lower is better)
Translates to: AGAGMGCGRRPPGCS*RRCTGRPSAAETLS
Trigger: GGACAGTGTCTCTGCTGCTGATGGCCGGCCTGTGCACCTTCTTCAGCTGCATCCTGGCGGTCTTCTTCCACACCCCATACCGGCGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS GCA 90 bp CTGCTGGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGATGAGTATTCCCTCGGCCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LLAGGQGRLRASHSQ*RHCQHDEYSLGLPQ
Trigger: CTGGGGCAGGCCGAGGGAATACTCATCATGCTGGCAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512400.1
ENST00000515118.5
CDS GCA 90 bp GAAGACCGCCAGGATGCAGCTGTCCAGTCAAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: EDRQDAAVQSSGSSP*WQVDKDGSERRTVS
Trigger: ACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCTGCATCCTGGCGGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS CCA 90 bp CCCAGAGGGTTCGACATGGTGGCGAGCATGTTGGCCGTGGCTCGCTaGTGCTCTGGGAACCACAAGGCAGCCAGCTTGGCTGGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PRGFDMVASMLAVAR*CSGNHKAASLAGEK
Trigger: CTTCTCTCCAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp GGGACAGCACATTGGCCACAAGGACGCCCAGAGGGTTCGACATGGTaGCGAGCATGTTGGCCGTGGCTCGCTGGTGCTCTGGGAACCACA +
Preference number: 5 (lower is better)
Translates to: GTAHWPQGRPEGSTW*RACWPWLAGALGTT
Trigger: TGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS GCA 90 bp GCCATCAGCAGCAGAGACACTGTCCAGTCAAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGT +
Preference number: 5 (lower is better)
Translates to: AISSRDTVQSSGSSP*WQVDKDGSERRTVS
Trigger: ACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTGTCTCTGCTGCTGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS CCA 90 bp GCAGAGACACTGTCCAGTCAAGTGGATCCTCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTGCCGTCATTG +
Preference number: 5 (lower is better)
Translates to: AETLSSQVDPPPAGR*TRTAPSVAQSVPSL
Trigger: CAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTGTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS CCA 90 bp ATCAGCAGCAGAGACACTGTCCAGTCAAGTGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: ISSRDTVQSSGSSPC*QVDKDGSERRTVSA
Trigger: GGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTGTCTCTGCTGCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS CCA 90 bp AGGATGCAGCTGTCCAGTCAAGTGGATCCTCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTGCCGTCATTG +
Preference number: 5 (lower is better)
Translates to: RMQLSSQVDPPPAGR*TRTAPSVAQSVPSL
Trigger: CAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCTGCATCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CAA 90 bp AGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGACCAGTGACAGCCAGTaGATCTGCTCCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: SPFAPARRWTRCSSSPPSTSDSQ*ICSMDR
Trigger: CCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGT...CGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp TCCCGGAGCCCGCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTGAAGGCAAATGGGTTTaGGGTCCCAACAACCATGCA +
Preference number: 5 (lower is better)
Translates to: SRSPQGALSPPPAGGPDVEGKWV*GPNNHA
Trigger: TGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTC...AACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGCGGGCTCCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000404286.6
CDS GCA 90 bp AGAGGGTTCGACATGGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTaGTCTGGGAACCACAAGGCAGCCAGCTTGGCTGGAGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: RGFDMVASMLAVARW*SGNHKAASLAGEKM
Trigger: CATCTTCTCTCCAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp GTTCGACATGGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTGCTCTaGGAACCACAAGGCAGCCAGCTTGGCTGGAGAGAAGATGACCAG +
Preference number: 5 (lower is better)
Translates to: VRHGGEHVGRGSLVL*EPQGSQLGWREDDQ
Trigger: CTGGTCATCTTCTCTCCAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS-3UTR CAA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGC +
Preference number: 5 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGVALEQ*SRLIAS
Trigger: GCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCAC...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp CCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCAGCCACAGCGTGGCGTaGGAGCAGTTGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PDVPVRLHRCGGQPGLQGSHSVA*EQLSRL
Trigger: CAGCCTGCTCAACTGCTCCAACGCCACGCTGTGGCT...GCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp CCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAAACCAGTGACAGCCAGTaGATCTGCTCCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: PPAGGPDVPVRLHRCGGQTSDSQ*ICSMDR
Trigger: CCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGT...TTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp CCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGATGTCCTCACCCTTCTaGACCAGCACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PQVDQMFQFASIDVAGNLMSSPF*TSTGDS
Trigger: GCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACAT...CAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CAA 90 bp CCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTATGTCCTCACCCTTCTaGACCAGCACAGGGGACAGC +
Preference number: 5 (lower is better)
Translates to: PAGGPDVPVRLHRCGGQPMSSPF*TSTGDS
Trigger: GCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACAT...AGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CAA 90 bp CGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: RPQVDQMFQFASIDVAGNNKPGR*DPACES
Trigger: AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATT...GTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp TTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: FAPARRWTRCSSSPPSMWNKPGR*DPACES
Trigger: AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATT...CCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS GCA 90 bp GGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCCCTCGGCCTGCCCCAGCACAAAGAT +
Preference number: 5 (lower is better)
Translates to: GGQGRLRASHSQCRH*QHDEYSLGLPQHKD
Trigger: ATCTTTGTGCTGGGGCAGGCCGAGGGAATACTCATCATGCTGGCAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512400.1
ENST00000515118.5
CDS CCA 90 bp AGGGCACAGAGGCTCTGGCCACCCATGAGGAAGGCAAATGGGTTTTaGGTCCCAACAACCATGCAGGGCACCATGCGTAGCACACTCCCG +
Preference number: 5 (lower is better)
Translates to: RAQRLWPPMRKANGF*VPTTMQGTMRSTLP
Trigger: CGGGAGTGTGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS-3UTR CAA 90 bp GCAAGGAGCCCTTTCGCCCCCGCCCGCAGGTGGACCAGATGTTCCAGTTCGCCTGAAGGCAAATGGGTTTaGGGTCCCAACAACCATGCA +
Preference number: 5 (lower is better)
Translates to: ARSPFAPARRWTRCSSSPEGKWV*GPNNHA
Trigger: TGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTC...AGGCGAACTGGAACATCTGGTCCACCTGCGGGCGGGGGCGAAAGGGCTCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS TCA 90 bp GATGGCCGCCACGCCAAATGGGGTGGATACCACGAGGTAGACCAGTaGCAGCCAGTTGATCTGCTCCATGGACAGGACCAAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: DGRHAKWGGYHEVDQ*QPVDLLHGQDQVLS
Trigger: GCTGAGGACTTGGTCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
ENST00000512249.1
ENST00000513740.1
ENST00000515118.5
CDS GCA 90 bp GGAAGGCAAATGGGTTTTGGGTCCCAACAACCATGCAGGGCACCATaGGTAGCACACTCCCGGCAAAGTTCAGCCACGCACCCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GRQMGFGSQQPCRAP*VAHSRQSSATHPGW
Trigger: CCATCCTGGGTGCGTGGCTGAACTTTGCCGGGAGTGTGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 90 bp AACCACAAGGCAGCCAGCTTGGCTGGAGAGAAGATGACCAGGCTCTaGGCAAGGGCACAGAGGCTCTGGCCACCCATGAGGAAGGCAAAT +
Preference number: 5 (lower is better)
Translates to: NHKAASLAGEKMTRL*ARAQRLWPPMRKAN
Trigger: ATTTGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCTTGCCCAGAGCCTGGTCATCTTCTCTCCAGCCAAGCTGGCTGCCTTGTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS-3UTR CAA 90 bp AGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCCAGTTGATCGTGGCGTaGGAGCAGTTGAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RCSSSPPSMWRATWTTRRQLIVA*EQLSRL
Trigger: CAGCCTGCTCAACTGCTCCAACGCCACGATCAACTG...GCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347950.9
CDS-3UTR CAA 90 bp CAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTTCCACATGAGCAGCTaGAGCCCATCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: QVDQMFQFASIDVAGNLDFHMSS*SPSRNF
Trigger: GAAGTTCCTGGATGGGCTCAAGCTGCTCATGTGGAA...GTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000503156.5
CDS-3UTR CAA 90 bp GGACTACAAGGCGCTCAGCTACGTGATCACCCACGGGGAGGAGAAGGAGGAGTGTTCCACATGAGCAGCTaGAGCCCATCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: GLQGAQLRDHPRGGEGGVFHMSS*SPSRNF
Trigger: GAAGTTCCTGGATGGGCTCAAGCTGCTCATGTGGAA...CACTCCTCCTTCTCCTCCCCGTGGGTGATCACGTAGCTGAGCGCCTTGTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS-3UTR CAA 90 bp GATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGCGCTCACATGAGCTGCAGCTaGAGCCCATCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: DVPVRLHRCGGQPGLQGAHMSCS*SPSRNF
Trigger: GAAGTTCCTGGATGGGCTCAAGCTGCAGCTCATGTG...AGCGCCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp AGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTCACATGAGCTGCAGCTaGAGCCCATCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: RWTRCSSSPPSMWRATWTHMSCS*SPSRNF
Trigger: GAAGTTCCTGGATGGGCTCAAGCTGCAGCTCATGTG...AGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS-3UTR CAA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGACCAGTGACAGCCAGTaGATCTGCTCCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRTSDSQ*ICSMDR
Trigger: CCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGT...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp GCAGGTGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGAGAAGGCAAATGGGTTTaGGGTCCCAACAACCATGCA +
Preference number: 5 (lower is better)
Translates to: AGGPDVPVRLHRCGGQPGEGKWV*GPNNHA
Trigger: TGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTC...TCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
CDS-3UTR CAA 90 bp ACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGGAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: TRCSSSPPSMWRATWTTRNKPGR*DPACES
Trigger: AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATT...CCTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp TGGACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAATAAACCTGGACGCTaGGACCCTGCCTGCGAGTCT +
Preference number: 5 (lower is better)
Translates to: WTRCSSSPPSMWRATWTTNKPGR*DPACES
Trigger: AGACTCGCAGGCAGGGTCCAAGCGTCCAGGTTTATT...TGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000515118.5
CDS-3UTR CAA 90 bp GACCAGATGTTCCAGTTCGCCTCCATCGATGTGGCGGGCAACCTGGACTACAAGCACATGAGCTGCAGCTaGAGCCCATCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: DQMFQFASIDVAGNLDYKHMSCS*SPSRNF
Trigger: GAAGTTCCTGGATGGGCTCAAGCTGCAGCTCATGTG...CTTGTAGTCCAGGTTGCCCGCCACATCGATGGAGGCGAACTGGAACATCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000515118.5
CDS TCA 90 bp GGATGGTATAGACACCGAGCATTAACGGAATGTCCTCACCCTTCTTaGCCAGCACAGGGGACAGCACATTGGCCACAAGGACGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GWYRHRALTECPHPS*PAQGTAHWPQGRPE
Trigger: CTCTGGGCGTCCTTGTGGCCAATGTGCTGTCCCCTGTGCTGGTCAAGAAGGGTGAGGACATTCCGTTAATGCTCGGTGTCTATACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CAA 90 bp TTGGCCGTGGCTCGCTGGTGCTCTGGGAACCACAAGGCAGCCAGCTaGGCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATGGCCG +
Preference number: 6 (lower is better)
Translates to: LAVARWCSGNHKAAS*APHGARRSPGSRWP
Trigger: CGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513740.1
CDS CCA 72 bp GCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGT +
Preference number: 6 (lower is better)
Translates to: APHGARRSPGSR*PPRQMGWIPRG
Trigger: ACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347950.9
ENST00000513740.1
ENST00000515118.5
CDS CCA 72 bp CCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGT +
Preference number: 6 (lower is better)
Translates to: PPHGARRSPGSR*PPRQMGWIPRG
Trigger: ACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512249.1
CDS CCA 72 bp GGGAGGGGTGTGTGTGCACAAGGAGACCACGCAGACTaGCACCCACACACGCCGCAGCCCTGCCTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GRGVCAQGDHAD*HPHTPQPCLSQ
Trigger: CTGGGACAGGCAGGGCTGCGGCGTGTGTGGGTGCCAGTCTGCGTGGTCTCCTTGTGCACACACACCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512400.1
CDS CCA 72 bp TCGCCGCACGGAGCCCGACGGAGTCCAGGATCCAGATaGCCGCCACGCCAAATGGGGTGGATACCACGAGGT +
Preference number: 6 (lower is better)
Translates to: SPHGARRSPGSR*PPRQMGWIPRG
Trigger: ACCTCGTGGTATCCACCCCATTTGGCGTGGCGGCCATCTGGATCCTGGACTCCGTCGGGCTCCGTGCGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp AGATGGTGGACAGCAGGCAGACGACGCCAGCAGGGATaGTATAGACACCGAGCGCCGCACGGAGCCCGACGG +
Preference number: 6 (lower is better)
Translates to: RWWTAGRRRQQG*YRHRAPHGARR
Trigger: CCGTCGGGCTCCGTGCGGCGCTCGGTGTCTATACCATCCCTGCTGGCGTCGTCTGCCTGCTGTCCACCATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347950.9
ENST00000515118.5
CDS TCA 72 bp CCACATGAGCAGCTTGAGCCCATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCCGGCAGAGGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: PHEQLEPIQELL*GGAGSPGRGRG
Trigger: ACCCCGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGATGGGCTCAAGCTGCTCATGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322224.9
ENST00000503156.5
CDS TCA 72 bp CATGAGCTGCAGCTTGAGCCCATCCAGGAACTTCTCTaGGGTGGAGCTGGCAGCCCCGGCAGAGGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: HELQLEPIQELL*GGAGSPGRGRG
Trigger: ACCCCGCCCTCTGCCGGGGCTGCCAGCTCCACCTCAGAGAAGTTCCTGGATGGGCTCAAGCTGCAGCTCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347950.9
ENST00000404286.6
ENST00000507165.5
ENST00000512400.1
ENST00000515118.5
CDS GCA 72 bp CAGGATGCAGCTGTCCAGTCAAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGACGGCTCCGAGCGTCGC +
Preference number: 6 (lower is better)
Translates to: QDAAVQSSGSSP*WQVDKDGSERR
Trigger: GCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCTGCATCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS GCA 72 bp GACATGGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTaGTCTGGGAACCACAAGGCAGCCAGCTTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: DMVASMLAVARW*SGNHKAASLAG
Trigger: TCCAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS GCA 72 bp GTGCTTGGTCCGGTCCACATAGGGGCCGAGAGCCAGTaGCCCCAGGATCCCAAACGTGATGAAGAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: VLGPVHIGAESQ*PQDPKRDEESA
Trigger: GGCGCTCTCTTCATCACGTTTGGGATCCTGGGGGCACTGGCTCTCGGCCCCTATGTGGACCGGACCAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512249.1
ENST00000512400.1
ENST00000515118.5
CDS GCA 72 bp GGACGGCTCCGAGCGTCGCACAGTCAGTGCCGTCATTaGCAGCATGATGAGTATTCCCTCGGCCTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GRLRASHSQCRH*QHDEYSLGLPQ
Trigger: CTGGGGCAGGCCGAGGGAATACTCATCATGCTGGCAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512400.1
ENST00000515118.5
CDS GCA 72 bp AGCAGAGACACTGTCCAGTCAAGTGGATCCTCCCCCTaGTGGCAGGTGGACAAGGACGGCTCCGAGCGTCGC +
Preference number: 6 (lower is better)
Translates to: SRDTVQSSGSSP*WQVDKDGSERR
Trigger: GCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTGTCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS CCA 72 bp GGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTGCTCTaGGAACCACAAGGCAGCCAGCTTGGCTGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: GGEHVGRGSLVL*EPQGSQLGWRE
Trigger: TTCTCTCCAGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp CCAGAGGGTTCGACATGGTGGCGAGCATGTTGGCCGTaGCTCGCTGGTGCTCTGGGAACCACAAGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PEGSTWWRACWP*LAGALGTTRQP
Trigger: TGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp CATTGGCCACAAGGACGCCCAGAGGGTTCGACATGGTaGCGAGCATGTTGGCCGTGGCTCGCTGGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: HWPQGRPEGSTW*RACWPWLAGAL
Trigger: CAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTGTGGCCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp GCACATTGGCCACAAGGACGCCCAGAGGGTTCGACATaGTGGCGAGCATGTTGGCCGTGGCTCGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: AHWPQGRPEGST*WRACWPWLAGA
Trigger: AGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAACCCTCTGGGCGTCCTTGTGGCCAATGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp CTGTCCAGTCAAGTGGATCCTCCCCCTGCTGGCAGGTaGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTG +
Preference number: 6 (lower is better)
Translates to: LSSQVDPPPAGR*TRTAPSVAQSV
Trigger: CACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512400.1
ENST00000515118.5
CDS CCA 72 bp TCCCCAGACTCGGCCTGCAGGCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATGCAGCTGAAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SPDSACRRRYGV*KKTARMQLKKV
Trigger: CACCTTCTTCAGCTGCATCCTGGCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS CCA 72 bp GATGCAGCTGTCCAGTCAAGTGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACA +
Preference number: 6 (lower is better)
Translates to: DAAVQSSGSSPC*QVDKDGSERRT
Trigger: TGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGCTGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS CCA 72 bp TCCCCAGACTCGGCCTGCAGGCGCCGGTATGGGGTGTaGAAGAAGACCGCCAGGATGCAGCTGTCCAGTCAA +
Preference number: 6 (lower is better)
Translates to: SPDSACRRRYGV*KKTARMQLSSQ
Trigger: TTGACTGGACAGCTGCATCCTGGCGGTCTTCTTCCACACCCCATACCGGCGCCTGCAGGCCGAGTCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503156.5
CDS CAA 72 bp GGTGCAAAGCTGAGCCACAGCGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGCAGGAACACCCAGCGG +
Preference number: 6 (lower is better)
Translates to: GAKLSHSVALEQ*SRLIASRNTQR
Trigger: CCGCTGGGTGTTCCTGCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCACGCTGTGGCTCAGCTTTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000512249.1
ENST00000515118.5
CDS CCA 72 bp TTCGACATGGTGGCGAGCATGTTGGCCGTGGCTCGCTaGTGCTCTGGGAACCACAAGGCAGCCAGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: FDMVASMLAVAR*CSGNHKAASLA
Trigger: AGCCAAGCTGGCTGCCTTGTGGTTCCCAGAGCACCAGCGAGCCACGGCCAACATGCTCGCCACCATGTCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp AGAGACACTGTCCAGTCAAGTGGATCCTCCCCCTGCTaGCAGGTGGACAAGGACGGCTCCGAGCGTCGCACA +
Preference number: 6 (lower is better)
Translates to: RDTVQSSGSSPC*QVDKDGSERRT
Trigger: TGTGCGACGCTCGGAGCCGTCCTTGTCCACCTGCCAGCAGGGGGAGGATCCACTTGACTGGACAGTGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000512400.1
ENST00000515118.5
CDS GCA 72 bp GGTGGACAAGGACGGCTCCGAGCGTCGCACAGTCAGTaGCGTCATTGCCAGCATGATGAGTATTCCCTCGGC +
Preference number: 6 (lower is better)
Translates to: GGQGRLRASHSQ*RHCQHDEYSLG
Trigger: GCCGAGGGAATACTCATCATGCTGGCAATGACGGCACTGACTGTGCGACGCTCGGAGCCGTCCTTGTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512400.1
ENST00000515118.5
CDS CAA 72 bp ACCAGTGACAGCCAGTTGATCGTGGCGTTGGAGCAGTaGAGCAGGCTGATCGCGAGCAGGAACACCCAGCGG +
Preference number: 6 (lower is better)
Translates to: TSDSQLIVALEQ*SRLIASRNTQR
Trigger: CCGCTGGGTGTTCCTGCTCGCGATCAGCCTGCTCAACTGCTCCAACGCCACGATCAACTGGCTGTCACTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347950.9
CDS TCA 72 bp GAGAGAACAGGCACAGGCCAATCTTGGTGGCCTCAGTaGAGTGCTTGGTCCGGTCCACATAGGGGCCGAGAG +
Preference number: 6 (lower is better)
Translates to: ERTGTGQSWWPQ*SAWSGPHRGRE
Trigger: CTCTCGGCCCCTATGTGGACCGGACCAAGCACTTCACTGAGGCCACCAAGATTGGCCTGTGCCTGTTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322224.9
ENST00000347950.9
ENST00000404286.6
ENST00000503156.5
ENST00000512249.1
ENST00000512400.1
ENST00000515118.5
CDS GCA 72 bp CAGGACCAAGTCCTCAGCAATGACGTCAGCCACAGGTaGAAAGCTGAGCCACAGCGTGGCGTTGGAGCAGTT +
Preference number: 6 (lower is better)
Translates to: QDQVLSNDVSHR*KAEPQRGVGAV
Trigger: AACTGCTCCAACGCCACGCTGTGGCTCAGCTTTGCACCTGTGGCTGACGTCATTGCTGAGGACTTGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000512249.1
ENST00000515118.5
CDS GCA 72 bp ATGGGTTTTGGGTCCCAACAACCATGCAGGGCACCATaGGTAGCACACTCCCGGCAAAGTTCAGCCACGCAC +
Preference number: 6 (lower is better)
Translates to: MGFGSQQPCRAP*VAHSRQSSATH
Trigger: GTGCGTGGCTGAACTTTGCCGGGAGTGTGCTACGCATGGTGCCCTGCATGGTTGTTGGGACCCAAAACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp AGGCTCTGGCCACCCATGAGGAAGGCAAATGGGTTTTaGGTCCCAACAACCATGCAGGGCACCATGCGTAGC +
Preference number: 6 (lower is better)
Translates to: RLWPPMRKANGF*VPTTMQGTMRS
Trigger: GCTACGCATGGTGCCCTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp GGCACAGAGGCTCTGGCCACCCATGAGGAAGGCAAATaGGTTTTGGGTCCCAACAACCATGCAGGGCACCAT +
Preference number: 6 (lower is better)
Translates to: GTEALATHEEGK*VLGPNNHAGHH
Trigger: ATGGTGCCCTGCATGGTTGTTGGGACCCAAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS CCA 72 bp AAGATGACCAGGCTCTGGGCAAGGGCACAGAGGCTCTaGCCACCCATGAGGAAGGCAAATGGGTTTTGGGTC +
Preference number: 6 (lower is better)
Translates to: KMTRLWARAQRL*PPMRKANGFWV
Trigger: GACCCAAAACCCATTTGCCTTCCTCATGGGTGGCCAGAGCCTCTGTGCCCTTGCCCAGAGCCTGGTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
CDS TCA 72 bp CACGCCAAATGGGGTGGATACCACGAGGTAGACCAGTaGCAGCCAGTTGATCGTGGCGTTGGAGCAGTTGAG +
Preference number: 6 (lower is better)
Translates to: HAKWGGYHEVDQ*QPVDRGVGAVE
Trigger: CTCAACTGCTCCAACGCCACGATCAACTGGCTGTCACTGGTCTACCTCGTGGTATCCACCCCATTTGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347950.9
CDS CAA 90 bp CTCGTGGATATTAATAAAACAGTGAAGAACTGCAGCAGGAGGCCCTaGACTGTCCAAGGAACGCCCCACACCTGGCACCTCGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LVDINKTVKNCSRRP*TVQGTPHTWHLGLW
Trigger: CCACAGCCCGAGGTGCCAGGTGTGGGGCGTTCCTTGGACAGTCAAGGGCCTCCTGCTGCAGTTCTTCACTGTTTTATTAATATCCACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507165.5
ENST00000513740.1
CDS TCA 72 bp GGGTGGATACCACGAGGTAGACCAGTGACAGCCAGTTaGTCTGCTCCATGGACAGGACCAAGTCCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: GWIPRGRPVTAS*SAPWTGPSPQQ
Trigger: TTGCTGAGGACTTGGTCCTGTCCATGGAGCAGATCAACTGGCTGTCACTGGTCTACCTCGTGGTATCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5
ENST00000512249.1
ENST00000513740.1
ENST00000515118.5
CDS CCA 72 bp AGATGGTGGACAGCAGGCAGACGACGCCAGCAGGGATaGTATAGACACCGAGCATTAACGGAATGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: RWWTAGRRRQQG*YRHRALTECPH
Trigger: GTGAGGACATTCCGTTAATGCTCGGTGTCTATACCATCCCTGCTGGCGTCGTCTGCCTGCTGTCCACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322224.9
ENST00000404286.6
ENST00000503156.5
ENST00000507165.5