RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC45A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000022567

Ensembl transcript IDs: ENST00000024061.7, ENST00000517878.6, ENST00000519067.5, ENST00000519986.1, ENST00000520137.1, ENST00000521804.1

Found 975 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACTGCCGGGTCGGCCACAGCATCTGCAGGGTTCCGCGGTGTCTCTaGTCCCGCCCATGGCCTGGCCCCGCCGCCCGCCCGCCCGCCCAC +
Preference number: 1 (lower is better)
Translates to: HCRVGHSICRVPRCL*SRPWPGPAARPPAH
Trigger: GTGGGCGGGCGGGCGGGCGGCGGGGCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGATGCTGTGGCCGACCCGGCAGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR CCA 90 bp GGCCACAGCATCTGCAGGGTTCCGCGGTGTCTCTGCTCCCGCCCATaGCCTGGCCCCGCCGCCCGCCCGCCCGCCCACCCGCCCACTGGA +
Preference number: 1 (lower is better)
Translates to: GHSICRVPRCLCSRP*PGPAARPPAHPPTG
Trigger: TCCAGTGGGCGGGTGGGCGGGCGGGCGGGCGGCGGGGCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGATGCTGTGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR GCA 90 bp GGGCGGAGGGGCTCTGGCCCGCACTGCCGGGTCGGCCACAGCATCTaGAGGGTTCCGCGGTGTCTCTGCTCCCGCCCATGGCCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: GRRGSGPHCRVGHSI*RVPRCLCSRPWPGP
Trigger: GGGGCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGATGCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR CCA 90 bp CAGCATCTGCAGGGTTCCGCGGTGTCTCTGCTCCCGCCCATGGCCTaGCCCCGCCGCCCGCCCGCCCGCCCACCCGCCCACTGGAATGTG +
Preference number: 1 (lower is better)
Translates to: QHLQGSAVSLLPPMA*PRRPPARPPAHWNV
Trigger: CACATTCCAGTGGGCGGGTGGGCGGGCGGGCGGGCGGCGGGGCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGATGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR CCA 90 bp GGTGCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTaGCCAGCTTCCCCAGGGGGCACCCGCACGGCCTCCTCGTCCCTC +
Preference number: 1 (lower is better)
Translates to: GATSPTPAASSALDG*PASPGGTRTASSSL
Trigger: GAGGGACGAGGAGGCCGTGCGGGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp ATGGCTGGGCGCAGACACACTCACACGCGCACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCCAGGTGGTGCCCAGCCCATCCCTGG +
Preference number: 1 (lower is better)
Translates to: MAGRRHTHTRTQELV*SSRSAPRWCPAHPW
Trigger: CCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGTGCGCGTGTGAGTGTGTCTGCGCCCAGCCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp CAAGGGTGCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATaGCTGGCCAGCTTCCCCAGGGGGCACCCGCACGGCCTCCTCGTC +
Preference number: 1 (lower is better)
Translates to: QGCHEPNSSCVLSTG*LASFPRGHPHGLLV
Trigger: GACGAGGAGGCCGTGCGGGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGCACCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp CAGGCCGGGCCCACACGCACCGCCAGAGCCCCGGTCACCCACACCTaGCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTG +
Preference number: 1 (lower is better)
Translates to: QAGPTRTARAPVTHT*LPGRQLQKPTLLTL
Trigger: CAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAGGTGTGGGTGACCGGGGCTCTGGCGGTGCGTGTGGGCCCGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp CACCCGAACATCACCGCCCCAGCAGTGGGAGAGCCGAGGGTGGCCTaGAGCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTC +
Preference number: 1 (lower is better)
Translates to: HPNITAPAVGEPRVA*SSPFQPSCCCRDGF
Trigger: GAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGCTGCAGGCCACCCTCGGCTCTCCCACTGCTGGGGCGGTGATGTTCGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp ACTACTGAATTGTGGCTATGGGGGCGGAGGGGCTCTGGCCCGCACTaGCGGGTCGGCCACAGCATCTGCAGGGTTCCGCGGTGTCTCTGC +
Preference number: 1 (lower is better)
Translates to: TTELWLWGRRGSGPH*RVGHSICRVPRCLC
Trigger: GCAGAGACACCGCGGAACCCTGCAGATGCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR GCA 90 bp ACCAGGCTTGGAGGCAGGGAGCTGGTGTCTCTCAGAAGCGGCGCGTaGTGGTGGGAGGCGGAGGGACAAACGAGGCTGACTCCGCAGCAG +
Preference number: 1 (lower is better)
Translates to: TRLGGRELVSLRSGA*WWEAEGQTRLTPQQ
Trigger: CTGCTGCGGAGTCAGCCTCGTTTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGAGAGACACCAGCTCCCTGCCTCCAAGCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp GTCTGGAGCTCACGCTCCGCCCCCAGGTGGTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCCACCCCTGCAAATCACTGTCTTCTG +
Preference number: 1 (lower is better)
Translates to: VWSSRSAPRWCPAHP*AGCLGATPANHCLL
Trigger: CAGAAGACAGTGATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCGTGAGCTCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp CTTGGAGGCAGGGAGCTGGTGTCTCTCAGAAGCGGCGCGTGCTGGTaGGAGGCGGAGGGACAAACGAGGCTGACTCCGCAGCAGCAGTCC +
Preference number: 1 (lower is better)
Translates to: LGGRELVSLRSGACW*EAEGQTRLTPQQQS
Trigger: GGACTGCTGCTGCGGAGTCAGCCTCGTTTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGAGAGACACCAGCTCCCTGCCTCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp TCTCGGAAGCAGGGGTCCCTCACGACAGGCCTGTGGCACCAGGCTTaGAGGCAGGGAGCTGGTGTCTCTCAGAAGCGGCGCGTGCTGGTG +
Preference number: 1 (lower is better)
Translates to: SRKQGSLTTGLWHQA*RQGAGVSQKRRVLV
Trigger: CACCAGCACGCGCCGCTTCTGAGAGACACCAGCTCCCTGCCTCCAAGCCTGGTGCCACAGGCCTGTCGTGAGGGACCCCTGCTTCCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCCCGATTCCAGCGTCGAGCAGGTGAG +
Preference number: 1 (lower is better)
Translates to: VRSPPVTRALAVPDV*VPLHLSRFQRRAGE
Trigger: CTCACCTGCTCGACGCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp AAAGGGGACACAGGCAGGCCGGCCCAGCTGAGAGCTCACGGCCTCTaGCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGC +
Preference number: 1 (lower is better)
Translates to: KGDTGRPAQLRAHGL*PFPPARIPAPGNFC
Trigger: GCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGGGCCGGCCTGCCTGTGTCCCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TCAGAAGCGGCGCGTGCTGGTGGGAGGCGGAGGGACAAACGAGGCTaGCTCCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAG +
Preference number: 1 (lower is better)
Translates to: SEAARAGGRRRDKRG*LRSSSPSHAVWWLK
Trigger: CTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGGAGTCAGCCTCGTTTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp CAAGGAGGTTCTGTGTGCATGGAGGAAATCAGGGCGCCGCACAGCTaGACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCA +
Preference number: 1 (lower is better)
Translates to: QGGSVCMEEIRAPHS*TLRRTEGRGQQRMP
Trigger: TGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTTCCTCCATGCACACAGAACCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GGAGAGCCGAGGGTGGCCTGCAGCTCCCCCTTCCAGCCCTCTTGTTaGTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGT +
Preference number: 1 (lower is better)
Translates to: GEPRVACSSPFQPSC*CRDGFLFSSGVLGG
Trigger: ACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGCTGCAGGCCACCCTCGGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp GACTTCTGCACTCCCAGCTGGCGAGGAATCGGCTTTGGTGAGCCCTaGATCCGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: DFCTPSWRGIGFGEP*IRPLGLQMRVGSLR
Trigger: CCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCGGATCCAGGGCTCACCAAAGCCGATTCCTCGCCAGCTGGGAGTGCAGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp CGTCTGCGTCCCTTTGCACCTGTCCCGATTCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATGGAGTTCCGACAGGTTCCAGCACGC +
Preference number: 1 (lower is better)
Translates to: RLRPFAPVPIPASSR*AGEEGMEFRQVPAR
Trigger: GCGTGCTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGGAATCGGGACAGGTGCAAAGGGACGCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp CAGACACCCGAGCTGCAGCCTGACCCACACAAGCTGCGGGCGCAATaGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCCTTCTTCTC +
Preference number: 1 (lower is better)
Translates to: QTPELQPDPHKLRAQ*RFADKTACPSALLL
Trigger: GAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp CAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTaGGTGAGCAGGTACCCAACTGCCACCCGGACACAAACACACAAT +
Preference number: 1 (lower is better)
Translates to: QPSAILGHRGLADTP*VSRYPTATRTQTHN
Trigger: ATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GTTAGAAGCCACAGACACCCGAGCTGCAGCCTGACCCACACAAGCTaGGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTG +
Preference number: 1 (lower is better)
Translates to: VRSHRHPSCSLTHTS*GRNGALQTRQPARL
Trigger: CAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTGGCTTCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp TGCTTAGTAGCTCAAACCTACCCTACGACTACTGAATTGTGGCTATaGGGGCGGAGGGGCTCTGGCCCGCACTGCCGGGTCGGCCACAGC +
Preference number: 1 (lower is better)
Translates to: CLVAQTYPTTTELWL*GRRGSGPHCRVGHS
Trigger: GCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR CCA 90 bp GTCACCGAGGAGCACACAACAGTCACGCCTGTCCCTGGCTGGCACTaGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCAAGGCC +
Preference number: 1 (lower is better)
Translates to: VTEEHTTVTPVPGWH*LPARSYPDSDCGKA
Trigger: GGCCTTGCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGACAGGCGTGACTGTTGTGTGCTCCTCGGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp CCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTaGGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTAC +
Preference number: 1 (lower is better)
Translates to: PLRSWDTVAWQTHRA*AGTQLPPGHKHTIY
Trigger: GTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp GTCTGCGCACATTACACAAGACTCGACCAACCGACACACCCTGCCTaGCACTCCACTCAGTGTGCAGAGGCACCCAGGCCACCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: VCAHYTRLDQPTHPA*HSTQCAEAPRPPAC
Trigger: GCAGGCTGGTGGCCTGGGTGCCTCTGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGGTCGAGTCTTGTGTAATGTGCGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTaGCCTTCTTCTCGGCTTCCCTTAAGACACAAGGTGACGACACGG +
Preference number: 1 (lower is better)
Translates to: AAGAMALCRQDSLPV*PSSRLPLRHKVTTR
Trigger: CCGTGTCGTCACCTTGTGTCTTAAGGGAAGCCGAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GCCTCCTCCCAGCTTTGGTGTGCGGTCGCTGCCCAAGGACAGGGCTaGCCTGGGCACAATGTGTCCAACTCGCTGAGGAAAAGAAGATAC +
Preference number: 1 (lower is better)
Translates to: ASSQLWCAVAAQGQG*PGHNVSNSLRKRRY
Trigger: GTATCTTCTTTTCCTCAGCGAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp ACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGTACCCAACTaGCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGG +
Preference number: 1 (lower is better)
Translates to: TPWPGRHTVREQVPN*HPDTNTQSTKCHQR
Trigger: CCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp TGCATCCGTCTGAGGTACAAGGTTAGAAGCCACAGACACCCGAGCTaGAGCCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAG +
Preference number: 1 (lower is better)
Translates to: CIRLRYKVRSHRHPS*SLTHTSCGRNGALQ
Trigger: CTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTGGCTTCTAACCTTGTACCTCAGACGGATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp ACTGGTCTGCGCACATTACACAAGACTCGACCAACCGACACACCCTaGCTGACACTCCACTCAGTGTGCAGAGGCACCCAGGCCACCAGC +
Preference number: 1 (lower is better)
Translates to: TGLRTLHKTRPTDTP*LTLHSVCRGTQATS
Trigger: GCTGGTGGCCTGGGTGCCTCTGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGGTCGAGTCTTGTGTAATGTGCGCAGACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp GGTATTTGCTTAGTAGCTCAAACCTACCCTACGACTACTGAATTGTaGCTATGGGGGCGGAGGGGCTCTGGCCCGCACTGCCGGGTCGGC +
Preference number: 1 (lower is better)
Translates to: GICLVAQTYPTTTEL*LWGRRGSGPHCRVG
Trigger: GCCGACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCAAATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 90 bp CCTGAGGCTTTCAAGGGCAGGTGTCCAAGAGGCAGCACACAGCACTaGCGTGTTCAGTGGCAGGTTGGAGGATTCCAGCTAAGGCCCCTG +
Preference number: 1 (lower is better)
Translates to: PEAFKGRCPRGSTQH*RVQWQVGGFQLRPL
Trigger: CAGGGGCCTTAGCTGGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGACACCTGCCCTTGAAAGCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TGGCCCCCAGATGAACCCACATTTGGTGTGGTTTGGGTCGGATCTTaGTTCGGGTCAGGCCACTGCCACCCCACATCCGCTGCTTTCTTG +
Preference number: 1 (lower is better)
Translates to: WPPDEPTFGVVWVGS*FGSGHCHPTSAAFL
Trigger: CAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAATCAAGATCCGACCCAAACCACACCAAATGTGGGTTCATCTGGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp CTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAGATaGACCCACATTTGGTGTGGTTTGGGTCGGATCTTGATTCGGGTC +
Preference number: 1 (lower is better)
Translates to: LQMRVGSLRQGVAPR*THIWCGLGRILIRV
Trigger: GACCCGAATCAAGATCCGACCCAAACCACACCAAATGTGGGTTCATCTGGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp CAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTaGCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAG +
Preference number: 1 (lower is better)
Translates to: QVPNCHPDTNTQSTK*HQRQETRQDQRPIK
Trigger: CTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTaGACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAA +
Preference number: 1 (lower is better)
Translates to: AESSRPLPLPASSHS*TWKLLPCVKGKLVK
Trigger: TTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp CTCCCAGCTTTGGTGTGCGGTCGCTGCCCAAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTCGCTGAGGAAAAGAAGATACGTCAT +
Preference number: 1 (lower is better)
Translates to: LPALVCGRCPRTGLP*AQCVQLAEEKKIRH
Trigger: ATGACGTATCTTCTTTTCCTCAGCGAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TTAGTGTGGTATTTGCTTAGTAGCTCAAACCTACCCTACGACTACTaGATTGTGGCTATGGGGGCGGAGGGGCTCTGGCCCGCACTGCCG +
Preference number: 1 (lower is better)
Translates to: LVWYLLSSSNLPYDY*IVAMGAEGLWPALP
Trigger: CGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCAAATACCACACTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR GCA 90 bp CGGAGGGCTCGCAGCAAAGCTGGCAGCACTTTCAGTAGTCGGACTTaGCCTGTCCAAGCACGAGATTCACAAGGCCATTCTCAAGTTTCC +
Preference number: 1 (lower is better)
Translates to: RRARSKAGSTFSSRT*PVQARDSQGHSQVS
Trigger: GGAAACTTGAGAATGGCCTTGTGAATCTCGTGCTTGGACAGGGCAAGTCCGACTACTGAAAGTGCTGCCAGCTTTGCTGCGAGCCCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp GGTCGGATCTTGATTCGGGTCAGGCCACTGCCACCCCACATCCGCTaGTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGGACGAGAAGC +
Preference number: 1 (lower is better)
Translates to: GRILIRVRPLPPHIR*FLASNCFIVVRTRS
Trigger: GCTTCTCGTCCTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAATCAAGATCCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTaGTCACAGACCAAGTCCTCCACACCTGGGGCATTCAAGAAACAC +
Preference number: 1 (lower is better)
Translates to: LLLQGRLPVQLWGSR*SQTKSSTPGAFKKH
Trigger: GTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTCTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TCACAGACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTaGTGGCTGTTGGAAGCCACTAACCATCTGAGGAGGGCTCAGTGG +
Preference number: 1 (lower is better)
Translates to: SQTKSSTPGAFKKHS*WLLEATNHLRRAQW
Trigger: CCACTGAGCCCTCCTCAGATGGTTAGTGGCTTCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 90 bp CTTGATTCGGGTCAGGCCACTGCCACCCCACATCCGCTGCTTTCTTaGCTCCAACTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAA +
Preference number: 1 (lower is better)
Translates to: LDSGQATATPHPLLS*LQLFYSRQDEKPEK
Trigger: TTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp GACCTGCACACTAAGAAGGGCTTTGCTTGCAAACACCTGAAGTGCTaGCAGCTTGACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGT +
Preference number: 1 (lower is better)
Translates to: DLHTKKGFACKHLKC*QLDESTKCAATDSC
Trigger: ACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAAAGCCCTTCTTAGTGTGCAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TGCACACTGACCTGCACACTAAGAAGGGCTTTGCTTGCAAACACCTaGAGTGCTGACAGCTTGACGAGTCTACAAAGTGTGCAGCCACCG +
Preference number: 1 (lower is better)
Translates to: CTLTCTLRRALLANT*SADSLTSLQSVQPP
Trigger: CGGTGGCTGCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAAAGCCCTTCTTAGTGTGCAGGTCAGTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp TCGGCTTCCCTTAAGACACAAGGTGACGACACGGACGGTTTCAAGTaGGTGCAATCTGGAAATAATCTCAGTGCAGGGGAGGGGTTGAGG +
Preference number: 1 (lower is better)
Translates to: SASLKTQGDDTDGFK*VQSGNNLSAGEGLR
Trigger: CCTCAACCCCTCCCCTGCACTGAGATTATTTCCAGATTGCACTCACTTGAAACCGTCCGTGTCGTCACCTTGTGTCTTAAGGGAAGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp GCCATTCTCAAGTTTCCACACATCCAGAAAATGTTCTTGAAGTCTTaGAAGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGA +
Preference number: 1 (lower is better)
Translates to: AILKFPHIQKMFLKS*KSALCDPGTPWPGR
Trigger: TCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGATGTGTGGAAACTTGAGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp ATCATAAAGAAAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTCAATACCTGCAGGCGTCTACAGAGA +
Preference number: 1 (lower is better)
Translates to: IIKKNTLQQLRHQPM*RDLTDVNTCRRLQR
Trigger: TCTCTGTAGACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTTTCTTTATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 90 bp AAAGTTAAGAAGCGAAACAGCGTGGGAAAAGGTGTCCATCTTTTCTaGAGCCGGTTAATGTCTAGTGTGGACAGCAATATTTGGTGTTTT +
Preference number: 1 (lower is better)
Translates to: KVKKRNSVGKGVHLF*SRLMSSVDSNIWCF
Trigger: AAAACACCAAATATTGCTGTCCACACTAGACATTAACCGGCTTCAGAAAAGATGGACACCTTTTCCCACGCTGTTTCGCTTCTTAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 90 bp AGTCTTTACTTAGCTGACTTGTATAGGGAACAAAACCACCACAAATaGGACCAACATTATCCTAGTTTGGTAACTGGTCTGCGCACATTA +
Preference number: 1 (lower is better)
Translates to: SLYLADLYREQNHHK*DQHYPSLVTGLRTL
Trigger: TAATGTGCGCAGACCAGTTACCAAACTAGGATAATGTTGGTCTCATTTGTGGTGGTTTTGTTCCCTATACAAGTCAGCTAAGTAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGACGCCCGGCCGAGGTaGGGAAGCCAGGGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHDARPR*GSQGCR
Trigger: ACGGCACCCCTGGCTTCCTCACCTCGGCCGGGCGTC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCCGCTCCGCCCCCAGGTaGTGCCCAGCCCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPRSAPR*CPAHPW
Trigger: CCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCG...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCCCACGGGGCTCCCGCTaGCCGGAGGGCTCGCAGCAA +
Preference number: 2 (lower is better)
Translates to: TPAASSALDGWPASPGGTPRGSR*PEGSQQ
Trigger: TTGCTGCGAGCCCTCCGGCCAGCGGGAGCCCCGTGG...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGCCTTGCGGCGGGACTTaGGAGGCAGGGCCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRPCGGT*EAGPAG
Trigger: CCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGG...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACTCACCGCCCCAGCAGTaGGAGAGCCGAGGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHSPPQQ*ESRGWP
Trigger: AGGCCACCCTCGGCTCTCCCACTGCTGGGGCGGTGA...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TPAASSALDGWPASPGGTCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACACGTTGGGAGCGGTCTaGAGGGGCAACCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHTLGAV*RGNLAS
Trigger: GGAGGCCAGGTTGCCCCTCCAGACCGCTCCCAACGT...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCACGCCTGTCCCTGGCTaGCACTGGCTTCCGGCACGT +
Preference number: 2 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRATPVPG*HWLPAR
Trigger: ACGTGCCGGAAGCCAGTGCCAGCCAGGGACAGGCGT...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 90 bp AGGCCCTCGCACATCCACACACCCGAGGTAGCCTTGCGGCGGGACTaGGGAGGCAGGGCCCGCTGGGAGCTCTGCTCTCAGGAATCCCCA +
Preference number: 2 (lower is better)
Translates to: RPSHIHTPEVALRRD*GGRARWELCSQESP
Trigger: TGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGGCTACCTCGGGTGTGTGGATGTGCGAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: PAESSRPLPLPASSHSCTPASSR*AGEEGM
Trigger: CATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGG...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGCTGGGCCCCCAACATaGTGTGTGCACGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHAGPPT*CVHGPC
Trigger: ACAAGGCCCGTGCACACAGCATGTTGGGGGCCCAGC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 2 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRAAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGAAGCGGCGCGTGCTaGTGGGAGGCGGAGGGACAA +
Preference number: 2 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSRSGAC*WEAEGQ
Trigger: TTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCT...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGCTCTGGCCGGAGGGTaGTGGCTGGCTTTGCATGAG +
Preference number: 2 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSALAGG*WLALHE
Trigger: CTCATGCAAAGCCAGCCATCACCCTCCGGCCAGAGC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGCCCACACCCCAAGGGTaGCACGAGCCCAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGPTPQG*HEPNSS
Trigger: GCTGGAGTTGGGCTCGTGGCACCCTTGGGGTGTGGG...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLTQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGTCCTCAGCACTGGATaGCTGGCCAGCTTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSVLSTG*LASFPR
Trigger: CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGAC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAGCGTCGAGCAGGTGAGCAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: PPVTRALAVPDVCVP*HLSRFQRRAGEQAR
Trigger: CCTCGCCTGCTCACCTGCTCGACGCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCGTGCAGGGGAGGGGTTaGGGCCAAAGATGTCGTGAC +
Preference number: 2 (lower is better)
Translates to: PAESSRPLPLPASSHSCTVQGRG*GQRCRD
Trigger: GTCACGACATCTTTGGCCTCAACCCCTCCCCTGCAC...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGGAAGAAGGGCCACAGTaGCCAGCCCACGGGGCTCCC +
Preference number: 2 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQEEGPQ*PAHGAP
Trigger: GGGAGCCCCGTGGGCTGGGCACTGTGGCCCTTCTTC...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGGCGCAATGGCGCTTTaGAGACAAGACAGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSGAMAL*RQDSLP
Trigger: GGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCAAAGATGTCGTGACCTaGTCCCCGCTGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TPAASSALDGWPASPGGTKDVVT*SPLWPG
Trigger: GCCTGGCCACAGCGGGGACCAGGTCACGACATCTTT...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 90 bp CCGAGCTGCAGCCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTaGCAGACAAGACAGCCTGCCCGTCTGCCCTTCTTCTCGGCTTCC +
Preference number: 2 (lower is better)
Translates to: PSCSLTHTSCGRNGA*QTRQPARLPFFSAS
Trigger: GGAAGCCGAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: PDPHKLRAQWRFADKTACPASSR*AGEEGM
Trigger: CATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGG...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGGCTCTGGCCCGCACTaGCGGGTCGGCCACAGCATC +
Preference number: 2 (lower is better)
Translates to: SSSATRERHDASLPTDPGGSGPH*RVGHSI
Trigger: GATGCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCATACTCTCCAACAGCTaGGGCACCAGCCAATGTGAC +
Preference number: 2 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPILSNS*GTSQCD
Trigger: GTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTAT...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCCTGGCAGACACACCGTaGGTGAGCAGGTACCCAACT +
Preference number: 2 (lower is better)
Translates to: RGEEARGAVPQRRRATVPLADTP*VSRYPT
Trigger: AGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAG...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGCACAGACACCCGAGCTaGAGCCTGACCCACACAAGC +
Preference number: 2 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRHRHPS*SLTHTS
Trigger: GCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTG...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCGCCTCCTCCCAGCTTTaGTGTGCGGTCGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: HKLRAQWRFADKTACPSAASSQL*CAVAAQ
Trigger: TTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGTCCCTGGCTGGCACTaGCTTCCGGCACGTTCATAC +
Preference number: 2 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRVPGWH*LPARSY
Trigger: GTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCTGCGGTCCCCTCATTTaGGCTCTGCACACTGACCTG +
Preference number: 2 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSCGPLI*ALHTDL
Trigger: CAGGTCAGTGTGCAGAGCCCAAATGAGGGGACCGCA...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCGTTTGGGTCGGATCTTaGTTCGGGTCAGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: ATSPTPAASSALDGWPASVWVGS*FGSGHC
Trigger: GCAGTGGCCTGACCCGAATCAAGATCCGACCCAAAC...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACCCATGTGGAGGGCACTaGATGGCCTTTGTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHPCGGH*MAFVVL
Trigger: AAGGACAACAAAGGCCATTCAGTGCCCTCCACATGG...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAACCCGAGCTGCAGCCTaGCCCACACAAGCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: SSSATRERHDASLPTDPGTRAAA*PTQAAG
Trigger: GCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGT...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCTTTATCTGTGTGATGTaGGGGGCCTCCCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRAFICVM*GASLSP
Trigger: AGGAGACAGGGAGGCCCCGCACATCACACAGATAAA...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCGCCCACCCGCCCACTaGAATGTGTGTAAACGGGAG +
Preference number: 2 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWRPPAH*NVCKRE
Trigger: CTCCCGTTTACACACATTCCAGTGGGCGGGTGGGCG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAGTTCCGCGGTGTCTCTaGTCCCGCCCATGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLVPRCL*SRPWPG
Trigger: GCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAAC...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACTTCAGTAGTCGGACTTaGCCTGTCCAAGCACGAGAT +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHFSSRT*PVQARD
Trigger: ATCTCGTGCTTGGACAGGGCAAGTCCGACTACTGAA...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 2 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGTCTGGAGGGGCAACCTaGCCTCCTAGGAGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLSGGAT*PPRRVL
Trigger: AAGGACTCTCCTAGGAGGCCAGGTTGCCCCTCCAGA...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCAACGACTACTGAATTGTaGCTATGGGGGCGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: AQDRGARTAAHATNIHLATTTEL*LWGRRG
Trigger: GCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGT...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR CAA 90 bp GGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAGATGAACCCACATTaGGTGTGGTTTGGGTCGGATCTTGATTCGGGTCAGGCCACTGCC +
Preference number: 2 (lower is better)
Translates to: GGKPQARGGPQMNPH*VWFGSDLDSGQATA
Trigger: GGCAGTGGCCTGACCCGAATCAAGATCCGACCCAAACCACACCAAATGTGGGTTCATCTGGGGGCCACCCCTTGCCTGAGGCTTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCGTTACTGCATCCGTCTaGGGTACAAGGTTAGAAGCC +
Preference number: 2 (lower is better)
Translates to: PAESSRPLPLPASSHSCTVTASV*GTRLEA
Trigger: GGCTTCTAACCTTGTACCTCAGACGGATGCAGTAAC...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCAGTCGGCCACAGCATCTaGAGGGTTCCGCGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPVGHSI*RVPRCL
Trigger: GAGACACCGCGGAACCCTGCAGATGCTGTGGCCGAC...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTATTGGTGTGCGGTCGCTaGCCAAGGACAGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLLVCGR*PRTGLP
Trigger: GGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAA...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCAACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 2 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCTCAGCACTGGATGGCTaGCCAGCTTCCCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSSALDG*PASPGG
Trigger: GCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGA...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCGCCCGCTGGGAGCTCTaGTCTCAGGAATCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSARWEL*SQESPA
Trigger: TGCTGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGC...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACGCCCGCTGGGAGCTCTaGTCTCAGGAATCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: DESTKCAATDSCHRGAHNARWEL*SQESPA
Trigger: TGCTGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGC...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGACAGACGTCAATACCTaGAGGCGTCTACAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRTDVNT*RRLQRG
Trigger: TCCTCTCTGTAGACGCCTGCAGGTATTGACGTCTGT...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCGACAGCCTGCCCGTCTaGCCTTCTTCTCGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSDSLPV*PSSRLP
Trigger: GGGAAGCCGAGAAGAAGGGCAGACGGGCAGGCTGTC...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGTQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAGCCTCCTCCCAGCTTTaGTGTGCGGTCGCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLASSQL*CAVAAQ
Trigger: TTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: NQLRRELRLEILTSTARSTFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACTCCAGAAAATGTTCTTaGAGTCTTGAAAGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: RTAEPCAGQRGADSSACHSRKCS*SLESQP
Trigger: GGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGA...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCCATGTGGAGGGCACTaGATGGCCTTTGTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGPCGGH*MAFVVL
Trigger: AAGGACAACAAAGGCCATTCAGTGCCCTCCACATGG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCC +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSAVPDV*VPLHLS
Trigger: GGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGC...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGATTGGTGTGCGGTCGCTaGCCAAGGACAGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGLVCGR*PRTGLP
Trigger: GGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAA...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAACGTTGGGAGCGGTCTaGAGGGGCAACCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGTLGAV*RGNLAS
Trigger: GGAGGCCAGGTTGCCCCTCCAGACCGCTCCCAACGT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTACTGAATTGTGGCTATaGGGGCGGAGGGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: NQLRRELRLEILTSTARSTELWL*GRRGSG
Trigger: GCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGT...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAGGCTTTGGTGAGCCCTaGATCCGGCCCCTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGGFGEP*IRPLGL
Trigger: AAGGCCCAGGGGCCGGATCCAGGGCTCACCAAAGCC...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGTCCCTGGCTGGCACTaGCTTCCGGCACGTTCATAC +
Preference number: 2 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQVPGWH*LPARSY
Trigger: GTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 90 bp TGTGGTATTTGCTTAGTAGCTCAAACCTACCCTACGACTACTGAATaGTGGCTATGGGGGCGGAGGGGCTCTGGCCCGCACTGCCGGGTC +
Preference number: 2 (lower is better)
Translates to: CGICLVAQTYPTTTE*WLWGRRGSGPHCRV
Trigger: GACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCAAATACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR TCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGCCCTGGGCCTTCAGATaGGGGTGGGAAGCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGPWAFR*GWEASG
Trigger: GCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGG...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGTTACTGCATCCGTCTaGGGTACAAGGTTAGAAGCC +
Preference number: 2 (lower is better)
Translates to: APPSSPLVAAGTASCSALVTASV*GTRLEA
Trigger: GGCTTCTAACCTTGTACCTCAGACGGATGCAGTAAC...CAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGATTCGGGTCAGGCCACTaGCACCCCACATCCGCTGCT +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGFGSGH*HPTSAA
Trigger: AGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAA...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAGCAGACAAGACAGCCTaGCCGTCTGCCCTTCTTCTC +
Preference number: 2 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLADKTA*PSALLL
Trigger: GAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGC...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGCGCTCCGCCCCCAGGTaGTGCCCAGCCCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKERSAPR*CPAHPW
Trigger: CCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCG...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGACCTGGGCAGGGTGTCTaGGAGCCACCCCTGCAAATC +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGPGQGV*EPPLQI
Trigger: GATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGG...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCCAAAACCACCACAAATaGGACCAACATTATCCTAGT +
Preference number: 2 (lower is better)
Translates to: PAESSRPLPLPASSHSCTQNHHK*DQHYPS
Trigger: ACTAGGATAATGTTGGTCTCATTTGTGGTGGTTTTG...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGACTCCCAGCTTTGGTGTaGGGTCGCTGCCCAAGGACA +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGLPALV*GRCPRT
Trigger: TGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGCCTTGCGGCGGGACTTaGGAGGCAGGGCCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPPCGGT*EAGPAG
Trigger: CCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGG...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGCAGGCGAGGAAGGCATaGAGTTCCGACAGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSQARKA*SSDRFQ
Trigger: CTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTG...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGATFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGAAGTGCTGACAGCTTaGCGAGTCTACAAAGTGTGC +
Preference number: 2 (lower is better)
Translates to: SSSATRERHDASLPTDPGEVLTA*RVYKVC
Trigger: GCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTATTTATCTGTGTGATGTaGGGGGCCTCCCTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLFICVM*GASLSP
Trigger: AGGAGACAGGGAGGCCCCGCACATCACACAGATAAA...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTCTCCCAGCTTTGGTGTaGGGTCGCTGCCCAAGGACA +
Preference number: 2 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGALPALV*GRCPRT
Trigger: TGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCAGGCGAGGAAGGCATaGAGTTCCGACAGGTTCCAG +
Preference number: 2 (lower is better)
Translates to: SRYPTATRTQTHNLQSATQARKA*SSDRFQ
Trigger: CTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGTGCGCCTCGAGATCCTaGCAAGTACAGCCAGGTCTC +
Preference number: 2 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGCASRS*QVQPGL
Trigger: GAGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCA...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCTTGCTTGCAAACACCTaGAGTGCTGACAGCTTGACG +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSLLANT*SADSLT
Trigger: CGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAA...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGAGAGACGAATCAAAGTaGAGTGAAAGTCAACGTTTC +
Preference number: 2 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLRDESK*SESQRF
Trigger: GAAACGTTGACTTTCACTGCACTTTGATTCGTCTCT...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGTCTGGAGGGGCAACCTaGCCTCCTAGGAGAGTCCTT +
Preference number: 2 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGSGGAT*PPRRVL
Trigger: AAGGACTCTCCTAGGAGGCCAGGTTGCCCCTCCAGA...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 2 (lower is better)
Translates to: PDPHKLRAQWRFADKTACGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTC +
Preference number: 2 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQRTGLP*AQCVQL
Trigger: GAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCT...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAAAGCTGCGGGCGCAATaGCGCTTTGCAGACAAGACA +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGKLRAQ*RFADKT
Trigger: TGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCTACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: PDPHKLRAQWRFADKTACYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGTACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 90 bp GGCCATTCTCAAGTTTCCACACATCCAGAAAATGTTCTTGAAGTCTaGAAAGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAG +
Preference number: 2 (lower is better)
Translates to: GHSQVSTHPENVLEV*KVSPLRSWDTVAWQ
Trigger: CTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGATGTGTGGAAACTTGAGAATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCC +
Preference number: 2 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKEAVPDV*VPLHLS
Trigger: GGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGC...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 2 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 2 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGAACCCACATTTGGTGTaGTTTGGGTCGGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQNPHLV*FGSDLD
Trigger: ATCAAGATCCGACCCAAACCACACCAAATGTGGGTT...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAAAACACCTGAAGTGCTaGCAGCTTGACGAGTCTACA +
Preference number: 2 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGKHLKC*QLDEST
Trigger: TGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 2 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 2 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGGGCCGCCATCGCTGGTaGCTGCACAAACCATTAGCC +
Preference number: 2 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPGRHRW*LHKPLA
Trigger: GGCTAATGGTTTGTGCAGCCACCAGCGATGGCGGCC...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR TCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETTFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACAGAGACGAATCAAAGTaGAGTGAAAGTCAACGTTTC +
Preference number: 2 (lower is better)
Translates to: DESTKCAATDSCHRGAHNRDESK*SESQRF
Trigger: GAAACGTTGACTTTCACTGCACTTTGATTCGTCTCT...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTACGTCTGCGTCCCTTTaGACCTGTCCCGATTCCAGC +
Preference number: 2 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETTSASL*TCPDSS
Trigger: GCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGT...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGCGAGTCTACAAAGTGTaGAGCCACCGACTCCTGTCA +
Preference number: 2 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKERVYKV*SHRLLS
Trigger: TGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCG...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGCCCTCATTTGGGCTCTaGACACTGACCTGCACACTA +
Preference number: 2 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKEPSFGL*TLTCTL
Trigger: TAGTGTGCAGGTCAGTGTGCAGAGCCCAAATGAGGG...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCACGGTTTCAAGTGAGTaGAATCTGGAAATAATCTCA +
Preference number: 2 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSTVSSE*NLEIIS
Trigger: TGAGATTATTTCCAGATTGCACTCACTTGAAACCGT...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGAACCCACATTTGGTGTaGTTTGGGTCGGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPNPHLV*FGSDLD
Trigger: ATCAAGATCCGACCCAAACCACACCAAATGTGGGTT...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 2 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp ATCTGCAGGGTTCCGCGGTGTCTCTGCTCCCGCCCATaGCCTGGCCCCGCCGCCCGCCCGCCCGCCCACCCG +
Preference number: 3 (lower is better)
Translates to: ICRVPRCLCSRP*PGPAARPPAHP
Trigger: CGGGTGGGCGGGCGGGCGGGCGGCGGGGCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR GCA 72 bp GGCTCTGGCCCGCACTGCCGGGTCGGCCACAGCATCTaGAGGGTTCCGCGGTGTCTCTGCTCCCGCCCATGG +
Preference number: 3 (lower is better)
Translates to: GSGPHCRVGHSI*RVPRCLCSRPW
Trigger: CCATGGGCGGGAGCAGAGACACCGCGGAACCCTGCAGATGCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 72 bp GACCCAGGAAAGGGGACACAGGCAGGCCGGCCCAGCTaGGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: DPGKGTQAGRPS*ELTASAPSRQL
Trigger: GAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGGGCCGGCCTGCCTGTGTCCCCTTTCCTGGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTaGCCAGGCCGGGCCCACACGCACCGCCAGAGCCCC +
Preference number: 3 (lower is better)
Translates to: VEAKDVVTWSPL*PGRAHTHRQSP
Trigger: GGGGCTCTGGCGGTGCGTGTGGGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp AGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTaGCCAGCTTCCCCAGGGGGCACCCGCACGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SPTPAASSALDG*PASPGGTRTAS
Trigger: GGAGGCCGTGCGGGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp CACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATaGCTGGCCAGCTTCCCCAGGGGGCACCCGCACGGC +
Preference number: 3 (lower is better)
Translates to: HEPNSSCVLSTG*LASFPRGHPHG
Trigger: GCCGTGCGGGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp ACAGGCAGGCCGGCCCAGCTGAGAGCTCACGGCCTCTaGCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGA +
Preference number: 3 (lower is better)
Translates to: TGRPAQLRAHGL*PFPPARIPAPG
Trigger: TCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGGGCCGGCCTGCCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp TCACGCTCCGCCCCCAGGTGGTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCCACCCCTGCAAATCAC +
Preference number: 3 (lower is better)
Translates to: SRSAPRWCPAHP*AGCLGATPANH
Trigger: GTGATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp AGAAGGGCCACAGTGCCCAGCCCACGGGGCTCCCGCTaGCCGGAGGGCTCGCAGCAAAGCTGGCAGCACTTT +
Preference number: 3 (lower is better)
Translates to: RRATVPSPRGSR*PEGSQQSWQHF
Trigger: AAAGTGCTGCCAGCTTTGCTGCGAGCCCTCCGGCCAGCGGGAGCCCCGTGGGCTGGGCACTGTGGCCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGGCTaGCCAAGGGGCCACCTTGAGCTCTGGCCGGAGGGT +
Preference number: 3 (lower is better)
Translates to: GCSVLLEDPRRG*PRGHLELWPEG
Trigger: ACCCTCCGGCCAGAGCTCAAGGTGGCCCCTTGGCCAGCCCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 3 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp GCGCGTGCTGGTGGGAGGCGGAGGGACAAACGAGGCTaGCTCCGCAGCAGCAGTCCCTCACACGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: ARAGGRRRDKRG*LRSSSPSHAVW
Trigger: CCACACAGCGTGTGAGGGACTGCTGCTGCGGAGTCAGCCTCGTTTGTCCCTCCGCCTCCCACCAGCACGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CCAGGGGATGGTCTCAGTCCACGGCACAGAGCGACGTaGCCCTGGCAGCACTGTGGAGGGCAAGGGATGCCG +
Preference number: 3 (lower is better)
Translates to: PGDGLSPRHRAT*PWQHCGGQGMP
Trigger: CGGCATCCCTTGCCCTCCACAGTGCTGCCAGGGGCACGTCGCTCTGTGCCGTGGACTGAGACCATCCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CGGACCAGCCTCCTCCCAGCTTTGGTGTGCGGTCGCTaGCCAAGGACAGGGCTGCCCTGGGCACAATGTGTC +
Preference number: 3 (lower is better)
Translates to: RTSLLPALVCGR*PRTGLPWAQCV
Trigger: GACACATTGTGCCCAGGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGCTGGTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CCCACACGCACCGCCAGAGCCCCGGTCACCCACACCTaGCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTA +
Preference number: 3 (lower is better)
Translates to: PTRTARAPVTHT*LPGRQLQKPTL
Trigger: TAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAGGTGTGGGTGACCGGGGCTCTGGCGGTGCGTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp AGGGAGCTGGTGTCTCTCAGAAGCGGCGCGTGCTGGTaGGAGGCGGAGGGACAAACGAGGCTGACTCCGCAG +
Preference number: 3 (lower is better)
Translates to: RELVSLRSGACW*EAEGQTRLTPQ
Trigger: CTGCGGAGTCAGCCTCGTTTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGAGAGACACCAGCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCACAGAGCACCTCCCCTTaGACACTGACCGGCGTCCCC +
Preference number: 3 (lower is better)
Translates to: AQDRGARTAAHATNIHLAQSTSP*TLTGVP
Trigger: GGGGACGCCGGTCAGTGTCAAAGGGGAGGTGCTCTG...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp TCTGTGTGCATGGAGGAAATCAGGGCGCCGCACAGCTaGACCCTGCGCAGGACAGAGGGGCGCGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: SVCMEEIRAPHS*TLRRTEGRGQQ
Trigger: CTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTTCCTCCATGCACACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp GCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTaGGTGAGCAGGTACCCAACTGCCACCCGGACACAA +
Preference number: 3 (lower is better)
Translates to: AILGHRGLADTP*VSRYPTATRTQ
Trigger: TTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GAGCTGCAGCCTGACCCACACAAGCTGCGGGCGCAATaGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCC +
Preference number: 3 (lower is better)
Translates to: ELQPDPHKLRAQ*RFADKTACPSA
Trigger: GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GATGGTCTCAGTCCACGGCACAGAGCGACGTGCCCCTaGCAGCACTGTGGAGGGCAAGGGATGCCGCTAGGA +
Preference number: 3 (lower is better)
Translates to: DGLSPRHRATCP*QHCGGQGMPLG
Trigger: TCCTAGCGGCATCCCTTGCCCTCCACAGTGCTGCCAGGGGCACGTCGCTCTGTGCCGTGGACTGAGACCATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp TCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTaGGCAGGTACCCAACTGCCACCCGGACACAAACAC +
Preference number: 3 (lower is better)
Translates to: SWDTVAWQTHRA*AGTQLPPGHKH
Trigger: GTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp CTTCTGCACTCCCAGCTGGCGAGGAATCGGCTTTGGTaGGCCCTGGATCCGGCCCCTGGGCCTTCAGATGAG +
Preference number: 3 (lower is better)
Translates to: LLHSQLARNRLW*ALDPAPGPSDE
Trigger: CTCATCTGAAGGCCCAGGGGCCGGATCCAGGGCTCACCAAAGCCGATTCCTCGCCAGCTGGGAGTGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCCCGATTCCAGCGTCGA +
Preference number: 3 (lower is better)
Translates to: PPVTRALAVPDV*VPLHLSRFQRR
Trigger: TCGACGCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GCTCAAACCTACCCTACGACTACTGAATTGTGGCTATaGGGGCGGAGGGGCTCTGGCCCGCACTGCCGGGTC +
Preference number: 3 (lower is better)
Translates to: AQTYPTTTELWL*GRRGSGPHCRV
Trigger: GACCCGGCAGTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR CAA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAACACCCGAGGTAGCCTaGCGGCGGGACTTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLTPEVA*RRDLGG
Trigger: GCCTCCCAAGTCCCGCCGCAAGGCTACCTCGGGTGT...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CACAGACACCCGAGCTGCAGCCTGACCCACACAAGCTaGGGGCGCAATGGCGCTTTGCAGACAAGACAGCCT +
Preference number: 3 (lower is better)
Translates to: HRHPSCSLTHTS*GRNGALQTRQP
Trigger: AGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCCTACGACTACTGAATaGTGGCTATGGGGGCGGAGG +
Preference number: 3 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQPTTTE*WLWGRR
Trigger: CCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 72 bp CCCTTTGCACCTGTCCCGATTCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATGGAGTTCCGACAGGTT +
Preference number: 3 (lower is better)
Translates to: PFAPVPIPASSR*AGEEGMEFRQV
Trigger: AACCTGTCGGAACTCCATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGGAATCGGGACAGGTGCAAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CAGCTTTGGTGTGCGGTCGCTGCCCAAGGACAGGGCTaGCCTGGGCACAATGTGTCCAACTCGCTGAGGAAA +
Preference number: 3 (lower is better)
Translates to: QLWCAVAAQGQG*PGHNVSNSLRK
Trigger: TTTCCTCAGCGAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CTGAGGTACAAGGTTAGAAGCCACAGACACCCGAGCTaGAGCCTGACCCACACAAGCTGCGGGCGCAATGGC +
Preference number: 3 (lower is better)
Translates to: LRYKVRSHRHPS*SLTHTSCGRNG
Trigger: GCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTGGCTTCTAACCTTGTACCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp AGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAGATaGACCCACATTTGGTGTGGTTTGGGTCGGATCTTG +
Preference number: 3 (lower is better)
Translates to: RVGSLRQGVAPR*THIWCGLGRIL
Trigger: CAAGATCCGACCCAAACCACACCAAATGTGGGTTCATCTGGGGGCCACCCCTTGCCTGAGGCTTCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp TCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTaGACCTGGAAACTTCTGCCATGTGTTAAGGGGAAG +
Preference number: 3 (lower is better)
Translates to: SRPLPLPASSHS*TWKLLPCVKGK
Trigger: CTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp TTGGTGTGCGGTCGCTGCCCAAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTCGCTGAGGAAAAGAAG +
Preference number: 3 (lower is better)
Translates to: LVCGRCPRTGLP*AQCVQLAEEKK
Trigger: CTTCTTTTCCTCAGCGAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GAGCACACAACAGTCACGCCTGTCCCTGGCTGGCACTaGCTTCCGGCACGTTCATACCCTGACAGTGACTGT +
Preference number: 3 (lower is better)
Translates to: EHTTVTPVPGWH*LPARSYPDSDC
Trigger: ACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGACAGGCGTGACTGTTGTGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp CAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTaGTCACAGACCAAGTCCTCCACACCTGGGGCATTC +
Preference number: 3 (lower is better)
Translates to: QGRLPVQLWGSR*SQTKSSTPGAF
Trigger: GAATGCCCCAGGTGTGGAGGACTTGGTCTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAGGGCGCAATGGCGCTTaGCAGACAAGACAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGGRNGA*QTRQPA
Trigger: GGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCC...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp CATTACACAAGACTCGACCAACCGACACACCCTGCCTaGCACTCCACTCAGTGTGCAGAGGCACCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: HYTRLDQPTHPA*HSTQCAEAPRP
Trigger: TGGCCTGGGTGCCTCTGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGGTCGAGTCTTGTGTAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CGCACATTACACAAGACTCGACCAACCGACACACCCTaGCTGACACTCCACTCAGTGTGCAGAGGCACCCAG +
Preference number: 3 (lower is better)
Translates to: RTLHKTRPTDTP*LTLHSVCRGTQ
Trigger: CTGGGTGCCTCTGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGGTCGAGTCTTGTGTAATGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GCAAGGGGTGGCCCCCAGATGAACCCACATTTGGTGTaGTTTGGGTCGGATCTTGATTCGGGTCAGGCCACT +
Preference number: 3 (lower is better)
Translates to: ARGGPQMNPHLV*FGSDLDSGQAT
Trigger: AGTGGCCTGACCCGAATCAAGATCCGACCCAAACCACACCAAATGTGGGTTCATCTGGGGGCCACCCCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp CCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTaGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTT +
Preference number: 3 (lower is better)
Translates to: PLPLPASSHSCT*KLLPCVKGKLV
Trigger: AACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp AACTGCCACCCGGACACAAACACACAATCTACAAAGTaGCACCAGCGGCAGGAGACACGGCAAGACCAGAGG +
Preference number: 3 (lower is better)
Translates to: NCHPDTNTQSTK*HQRQETRQDQR
Trigger: CCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CCTGGCAGACACACCGTGCGTGAGCAGGTACCCAACTaGCACCCGGACACAAACACACAATCTACAAAGTGC +
Preference number: 3 (lower is better)
Translates to: PGRHTVREQVPN*HPDTNTQSTKC
Trigger: GCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CCA 72 bp GGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTaGCAAAGAAACAGAGCAGAACCTAAGGGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: GRGQQRMPQTFT*QRNRAEPKGSV
Trigger: CACAGAGCCCTTAGGTTCTGCTCTGTTTCTTTGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 3 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCAATGTTCTTGAAGTCTaGAAAGTCAGCCCTCTGCGA +
Preference number: 3 (lower is better)
Translates to: PDPHKLRAQWRFADKTACNVLEV*KVSPLR
Trigger: TCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATT...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp TCCAACAGCTGCGGCACCAGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCAGGCGTCTACAGAGAG +
Preference number: 3 (lower is better)
Translates to: SNSCGTSQCDEI*QTSIPAGVYRE
Trigger: CTCTCTGTAGACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR-3UTR CAA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGTCCTTCCCCCTGACGTaGGGAGCGGTCTGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPSFPLT*GAVWRG
Trigger: GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGA...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGGGTTTGGGTCGGATCTaGATTCGGGTCAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGGLGRI*IRVRPL
Trigger: CAGTGGCCTGACCCGAATCAAGATCCGACCCAAACC...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGCACATTTGGTGTGGTTaGGGTCGGATCTTGATTCGG +
Preference number: 3 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQHIWCG*GRILIR
Trigger: CCGAATCAAGATCCGACCCAAACCACACCAAATGTG...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCACTTTACTTAGCTGACTaGTATAGGGAACAAAACCAC +
Preference number: 3 (lower is better)
Translates to: AQDRGARTAAHATNIHLALYLAD*YREQNH
Trigger: GTGGTTTTGTTCCCTATACAAGTCAGCTAAGTAAAG...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp TATTTGCTTAGTAGCTCAAACCTACCCTACGACTACTaGATTGTGGCTATGGGGGCGGAGGGGCTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: YLLSSSNLPYDY*IVAMGAEGLWP
Trigger: GGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 72 bp GGGCTTTGCTTGCAAACACCTGAAGTGCTGACAGCTTaGCGAGTCTACAAAGTGTGCAGCCACCGACTCCTG +
Preference number: 3 (lower is better)
Translates to: GLCLQTPEVLTA*RVYKVCSHRLL
Trigger: CAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp CGCAGCAAAGCTGGCAGCACTTTCAGTAGTCGGACTTaGCCTGTCCAAGCACGAGATTCACAAGGCCATTCT +
Preference number: 3 (lower is better)
Translates to: RSKAGSTFSSRT*PVQARDSQGHS
Trigger: AGAATGGCCTTGTGAATCTCGTGCTTGGACAGGGCAAGTCCGACTACTGAAAGTGCTGCCAGCTTTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp AAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTaGTGGCTGTTGGAAGCCACTAACCATCTGAGGAGG +
Preference number: 3 (lower is better)
Translates to: KSSTPGAFKKHS*WLLEATNHLRR
Trigger: CCTCCTCAGATGGTTAGTGGCTTCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 3 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp AAAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTCAATACCTGCAGGCGT +
Preference number: 3 (lower is better)
Translates to: KNTLQQLRHQPM*RDLTDVNTCRR
Trigger: ACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR GCA 72 bp AGACACAAGGTGACGACACGGACGGTTTCAAGTGAGTaGAATCTGGAAATAATCTCAGTGCAGGGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: RHKVTTRTVSSE*NLEIISVQGRG
Trigger: ACCCCTCCCCTGCACTGAGATTATTTCCAGATTGCACTCACTTGAAACCGTCCGTGTCGTCACCTTGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR GCA 72 bp TTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTaGCATGTGTTAAGGGGAAGCTCGTTAAAAGAGTCT +
Preference number: 3 (lower is better)
Translates to: FPPARIPAPGNF*HVLRGSSLKES
Trigger: AGACTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR-3UTR CAA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACTGGTTAGTGTGGTATTaGCTTAGTAGCTCAAACCTA +
Preference number: 3 (lower is better)
Translates to: DESTKCAATDSCHRGAHNWLVWY*LSSSNL
Trigger: TAGGTTTGAGCTACTAAGCAAATACCACACTAACCA...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
3UTR TCA 72 bp ACTAAGAAGGGCTTTGCTTGCAAACACCTGAAGTGCTaGCAGCTTGACGAGTCTACAAAGTGTGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: TKKGFACKHLKC*QLDESTKCAAT
Trigger: GGTGGCTGCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAAAGCCCTTCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp AAGTTTCCACACATCCAGAAAATGTTCTTGAAGTCTTaGAAGTCAGCCCTCTGCGATCCTGGGACACCGTGG +
Preference number: 3 (lower is better)
Translates to: KFPHIQKMFLKS*KSALCDPGTPW
Trigger: CCACGGTGTCCCAGGATCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGATGTGTGGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp ACCTGCACACTAAGAAGGGCTTTGCTTGCAAACACCTaGAGTGCTGACAGCTTGACGAGTCTACAAAGTGTG +
Preference number: 3 (lower is better)
Translates to: TCTLRRALLANT*SADSLTSLQSV
Trigger: CACACTTTGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAAAGCCCTTCTTAGTGTGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR TCA 72 bp AAGCGAAACAGCGTGGGAAAAGGTGTCCATCTTTTCTaGAGCCGGTTAATGTCTAGTGTGGACAGCAATATT +
Preference number: 3 (lower is better)
Translates to: KRNSVGKGVHLF*SRLMSSVDSNI
Trigger: AATATTGCTGTCCACACTAGACATTAACCGGCTTCAGAAAAGATGGACACCTTTTCCCACGCTGTTTCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCGCAGGCCGGCCCAGCTaGGAGCTCACGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPAGRPS*ELTASA
Trigger: GGCAGAGGCCGTGAGCTCTCAGCTGGGCCGGCCTGC...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCCGGGCTCCTCAGCGCTaGGCTCCTGCTGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRARAPQR*APAAGC
Trigger: ACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCG...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCGTGGTGGCCCCGCTCTaGTTCCGGTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRAVVAPL*FRCRCC
Trigger: GCAGCACCGGCACCGGAACCAGAGCGGGGCCACCAC...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCCCTTGCGGCGGGACTTaGGAGGCAGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPPCGGT*EAGPAG
Trigger: CCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGG...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCCCTTGCGGCGGGACTTaGGAGGCAGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTPCGGT*EAGPAG
Trigger: CCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGG...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACCTGGTCCCCGCTGTaGCCAGGCCGGGCCCACACG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTWSPL*PGRAHT
Trigger: CGTGTGGGCCCGGCCTGGCCACAGCGGGGACCAGGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGGACGCCCGGCCGAGGTaGGGAAGCCAGGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGDARPR*GSQGCR
Trigger: ACGGCACCCCTGGCTTCCTCACCTCGGCCGGGCGTC...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGTGCCTGCGGAACGCGTaGCGCCGCCGCCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQCLRNA*RRRRME
Trigger: CTCCATGCGGCGGCGGCGGCACGCGTTCCGCAGGCA...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCTGCCTGCGGAACGCGTaGCGCCGCCGCCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASCLRNA*RRRRME
Trigger: CTCCATGCGGCGGCGGCGGCACGCGTTCCGCAGGCA...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCGCTTCGTGTCCACCCTaGTGTAGCCGCCGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPASCPP*CSRRGR
Trigger: ACGCCCTCGGCGGCTACACCAGGGTGGACACGAAGC...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCTTGCGGCGGGACTTaGGAGGCAGGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHPCGGT*EAGPAG
Trigger: CCCAGCGGGCCCTGCCTCCCAAGTCCCGCCGCAAGG...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCTGCTGCGCGACGGCTTaGTCAGCACCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRACCATA*SAPRRW
Trigger: CCAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCA...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCAGGCCACCATGGGGATaGCGCGGACAGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPRPPWG*RGQSPR
Trigger: CCGTGGGGACTGTCCGCGTCATCCCCATGGTGGCCT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACCCGAGCTGCAGCCTaGCCCACACAAGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTRAAA*PTQAAG
Trigger: GCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGGGCGCCGCACAGCTaGACCCTGCGCAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSRAPHS*TLRRTE
Trigger: CTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCT...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCAAGGTGCTGGAGGCCTaGCTGCGGAACGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTKVLEA*LRNACR
Trigger: GCGGCACGCGTTCCGCAGGCAGGCCTCCAGCACCTT...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGAGAGCTCACGGCCTCTaGCCCTTCCCGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRRAHGL*PFPPAR
Trigger: GCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCT...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCGAGCCGAGGGTGGCCTaGAGCTCCCCCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASEPRVA*SSPFQP
Trigger: GGGCTGGAAGGGGGAGCTGCAGGCCACCCTCGGCTC...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCCGCACAGCTGAACCCTaGGCAGGACAGAGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTRTAEP*AGQRGA
Trigger: CGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCCCAGGCGGGGCAGCTTaGTCTTGGCGAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSPGGAA*SWRAPG
Trigger: GCCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGG...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGCCCCGCTGGAGGTGGTaGCCCCGCTCTGGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVPRWRW*PRSGSG
Trigger: ACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGG...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCGCCTCCTCCCAGCTTTaGTGTGCGGTCGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPASSQL*CAVAAQ
Trigger: TTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCGCTCCGCCCCCAGGTaGTGCCCAGCCCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLRSAPR*CPAHPW
Trigger: CCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCGCTCCGCCCCCAGGTaGTGCCCAGCCCATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHRSAPR*CPAHPW
Trigger: CCAGGGATGGGCTGGGCACCACCTGGGGGCGGAGCG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCTCACCGCCCCAGCAGTaGGAGAGCCGAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPSPPQQ*ESRGWP
Trigger: AGGCCACCCTCGGCTCTCCCACTGCTGGGGCGGTGA...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCCGGTGGCATCGGCGCTaGAGTCCAGGACCACCACTC +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPRWHRR*SPGPPL
Trigger: GAGTGGTGGTCCTGGACTTCAGCGCCGATGCCACCG...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCGCTCCTCGTCGATGCTaGACAGGTGCAGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTAPRRC*TGAGPR
Trigger: CCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGC...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAGGAATCGGCTTTGGTaGGCCCTGGATCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHRNRLW*ALDPAP
Trigger: AGGGGCCGGATCCAGGGCTCACCAAAGCCGATTCCT...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCCCGACACACCCTGCCTaGCACTCCACTCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPPTHPA*HSTQCA
Trigger: TGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGG...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCGCAGGCCGGCCCAGCTaGGAGCTCACGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PDPHKLRAQWRFADKTACAGRPS*ELTASA
Trigger: GGCAGAGGCCGTGAGCTCTCAGCTGGGCCGGCCTGC...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAGGGACAAACGAGGCTaGCTCCGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHRDKRG*LRSSSP
Trigger: GGGACTGCTGCTGCGGAGTCAGCCTCGTTTGTCCCT...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACACGATGCCAATGGGCTaGCGGTTGGGGACATCGCCG +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHTMPMG*RLGTSP
Trigger: CGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGT...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCTCAGCGCTGCGCTCCTaGTGCGGGCTGTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTSALRS*CGLYCS
Trigger: GGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGCTGA...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTGTTCCCACCGGCCCTaGCTTCGCCGGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWCSHRP*LRRPTG
Trigger: CCCCGTTGGCCGGCGAAGGCAGGGCCGGTGGGAACA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACAGAGCTCACGGCCTCTaGCCCTTCCCGCCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHRAHGL*PFPPAR
Trigger: GCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCT...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCCAGCACGTAGCCGATaGCTCCGCCGAGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHPARSR*LRRGRQ
Trigger: CTGCCGGCCTCGGCGGAGCCATCGGCTACGTGCTGG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACGTGGTGGCCCCGCTCTaGTTCCGGTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHVVAPL*FRCRCC
Trigger: GCAGCACCGGCACCGGAACCAGAGCGGGGCCACCAC...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCCCCGCTGGAGGTGGTaGCCCCGCTCTGGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWPRWRW*PRSGSG
Trigger: ACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACTCTCGGTGTCCCCGCTaGAGGTGGTGGCCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHSRCPR*RWWPRS
Trigger: AGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGA...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGCAGGCGCACCGTaGTCTCGCCCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQTAGAP*SRPPPP
Trigger: AGGAGGGGGAGGGCGAGACCACGGTGCGCCTGCTGT...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCTGCCAAACCCTCGCTTaGAGTTCCCGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPCQTLA*SSRGCG
Trigger: ACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCA...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVTQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCACGCCTGTCCCTGGCTaGCACTGGCTTCCGGCACGT +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTTPVPG*HWLPAR
Trigger: ACGTGCCGGAAGCCAGTGCCAGCCAGGGACAGGCGT...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACAGCGGCGCGTGCTGGTaGGAGGCGGAGGGACAAACG +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHSGACW*EAEGQT
Trigger: CGTTTGTCCCTCCGCCTCCCACCAGCACGCGCCGCT...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCCTTGGCGGCTTCCTTaGGGAAGGTGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLPWRLP*GRWPGG
Trigger: CCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTGPPSA*ASARWA
Trigger: AGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCC...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWGPPSA*ASARWA
Trigger: AGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCAGGCCAAAGATGTCGTaGCCTGGTCCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTRPKMS*PGPRCG
Trigger: GCCACAGCGGGGACCAGGTCACGACATCTTTGGCCT...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCAGGCCAAAGATGTCGTaGCCTGGTCCCCGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTRPKMS*PGPRCG
Trigger: GCCACAGCGGGGACCAGGTCACGACATCTTTGGCCT...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAAGCCACTAACCATCTaGGGAGGGCTCAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPKPLTI*GGLSGP
Trigger: AGGGCCACTGAGCCCTCCTCAGATGGTTAGTGGCTT...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCCTATGGACCCCTCGCTaGTGGTCTCGCAGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRALWTPR*WSRSSR
Trigger: CCGAGAACTGCGAGACCATCAGCGAGGGGTCCATAG...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACGTCCCTGCCGCCCTGTaGCAGGCACCTCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHVPAAL*QAPPSN
Trigger: GTTGCTGGGAGGTGCCTGGCACAGGGCGGCAGGGAC...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGTCCGGAACCAGCTaGCCAGGAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRGSGTS*PGRSGS
Trigger: GGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCC...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCGGGCTCCTCAGCGCTaGGCTCCTGCTGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQRAPQR*APAAGC
Trigger: ACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTGCTGGAGGCCTGCCTaGGGAACGCGTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVCWRPA*GTRAAA
Trigger: GGCGGCGGCACGCGTTCCGCAGGCAGGCCTCCAGCA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAAAGGTGCTGGAGGCCTaGCTGCGGAACGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTKVLEA*LRNACR
Trigger: GCGGCACGCGTTCCGCAGGCAGGCCTCCAGCACCTT...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGCCGGTGCTGCCGCTaGCGCTTCTGCATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTCRCCR*RFCMSY
Trigger: GTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCA...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACTGGTTCCGGTGCCGGTaGTGCCGCTGCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHWFRCR*CRCRFC
Trigger: GCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCA...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCTGGCCATCACGGCTGTaGCGACAGAGAAGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTWPSRL*RQRSPA
Trigger: CGCTGGGCTTCTCTGTCGGCACAGCCGTGATGGCCA...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCTGGCCATCACGGCTGTaGCGACAGAGAAGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPWPSRL*RQRSPA
Trigger: CGCTGGGCTTCTCTGTCGGCACAGCCGTGATGGCCA...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACGAAGAAGGGCCACAGTaGCCAGCCCACGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHEEGPQ*PAHGAP
Trigger: GGGAGCCCCGTGGGCTGGGCACTGTGGCCCTTCTTC...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTTGCATAGAGTGAGCTaGCACGGACGCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTLHRVS*HGRPAE
Trigger: CTCGGCCGGGCGTCCGTGGCAGCTCACTCTATGCAA...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCTCAGAAGCGGCGCGTaGTGGTGGGAGGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHLRSGA*WWEAEG
Trigger: TCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGAG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCGCTGGGCCCCCAACATaGTGTGTGCACGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTAGPPT*CVHGPC
Trigger: ACAAGGCCCGTGCACACAGCATGTTGGGGGCCCAGC...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACGGCGCCTCAACAGCCTaGCTAGAGGCCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHGASTA*LEAPGQ
Trigger: CTGGCCAGGGGCCTCTAGCCAGGCTGTTGAGGCGCC...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCCAGCACGTAGCCGATaGCTCCGCCGAGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGPARSR*LRRGRQ
Trigger: CTGCCGGCCTCGGCGGAGCCATCGGCTACGTGCTGG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCCAGGCGGGGCAGCTTaGTCTTGGCGAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWPGGAA*SWRAPG
Trigger: GCCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCGTGGTGGCCCCGCTCTaGTTCCGGTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGVVAPL*FRCRCC
Trigger: GCAGCACCGGCACCGGAACCAGAGCGGGGCCACCAC...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTCTCGGTGTCCCCGCTaGAGGTGGTGGCCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWSRCPR*RWWPRS
Trigger: AGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCGCCTCCTCCCAGCTTTaGTGTGCGGTCGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPASSQL*CAVAAQ
Trigger: TTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACATGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHTQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCCGCCCACCCGCCCACTaGAATGTGTGTAAACGGGAG +
Preference number: 4 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRARPPAH*NVCKRE
Trigger: CTCCCGTTTACACACATTCCAGTGGGCGGGTGGGCG...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGTGGGAGAGCCGAGGGTaGCCTGCAGCTCCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLWESRG*PAAPPS
Trigger: GGAAGGGGGAGCTGCAGGCCACCCTCGGCTCTCCCA...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACTCCCAGCACCGTaGGCACGATGCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHPLPAP*ARCQWA
Trigger: AGCCCATTGGCATCGTGCTCACGGTGCTGGGAGTGG...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCAGTGGCGGCATAAATaGCCAGGCCCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQQWRHK*PGPSSP
Trigger: TGGGCTGCTGGGGCCTGGTCATTTATGCCGCCACTG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTCAAGTTGCATAGAGTaGGCTGCCACGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTSSCIE*AATDAR
Trigger: CCGGGCGTCCGTGGCAGCTCACTCTATGCAACTTGA...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCGGGGTGGCCCCCAGATaGACCCACATTTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTGVAPR*THIWCG
Trigger: ACCACACCAAATGTGGGTTCATCTGGGGGCCACCCC...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCGCTCTGGCCGGAGGGTaGTGGCTGGCTTTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASALAGG*WLALHE
Trigger: CTCATGCAAAGCCAGCCATCACCCTCCGGCCAGAGC...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCTTGAGGGCCATGTCCTaGTCCTCGCTGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPLRAMS*SSLSTT
Trigger: CGTGGTGGACAGCGAGGAGCAGGACATGGCCCTCAA...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTCAGCGCTGCGCTCCTaGTGCGGGCTGTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWSALRS*CGLYCS
Trigger: GGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGCTGA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCGGGCTCCTCAGCGCTaGGCTCCTGCTGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVRAPQR*APAAGC
Trigger: ACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGTCCGGCACGTGCAATaGCGAGTCGCTTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSVRHVQ*RVAFAA
Trigger: CGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGAC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCGCGGTGTCCGGCACGTaGAATGCCGAGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPAVSGT*NAESLL
Trigger: CAAAAGCGACTCGGCATTGCACGTGCCGGACACCGC...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGGCGGTGTCCGGCACGTaGAATGCCGAGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRAVSGT*NAESLL
Trigger: CAAAAGCGACTCGGCATTGCACGTGCCGGACACCGC...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGAGGGCTCGATGTCGTaGAGGAACAGCAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHEGSMS*RNSSSG
Trigger: GCCCGAGCTGCTGTTCCTGCACGACATCGAGCCCTC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGATGCCTGCGGAACGCGTaGCGCCGCCGCCGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGCLRNA*RRRRME
Trigger: CTCCATGCGGCGGCGGCGGCACGCGTTCCGCAGGCA...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATGCTGGAGGCCTGCCTaGGGAACGCGTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPCWRPA*GTRAAA
Trigger: GGCGGCGGCACGCGTTCCGCAGGCAGGCCTCCAGCA...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGCCCGCTGGGAGCTCTaGTCTCAGGAATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHARWEL*SQESPA
Trigger: TGCTGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACACGTCTGCGTCCCTTTaGACCTGTCCCGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHTSASL*TCPDSS
Trigger: GCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGT...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCGAAGAAGGGCCACAGTaGCCAGCCCACGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGEEGPQ*PAHGAP
Trigger: GGGAGCCCCGTGGGCTGGGCACTGTGGCCCTTCTTC...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGTTCGGGTCAGGCCACTaGCACCCCACATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGFGSGH*HPTSAA
Trigger: AGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAA...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGGGCGCAATGGCGCTTTaGAGACAAGACAGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRGAMAL*RQDSLP
Trigger: GGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCC...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCCCACACCCCAAGGGTaGCACGAGCCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLPTPQG*HEPNSS
Trigger: GCTGGAGTTGGGCTCGTGGCACCCTTGGGGTGTGGG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCTCAGAAGCGGCGCGTaGTGGTGGGAGGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQLRSGA*WWEAEG
Trigger: TCCCTCCGCCTCCCACCAGCACGCGCCGCTTCTGAG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGCGGACAGCAGCGCATaGCACAAACATTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHADSSA*HKHSPG
Trigger: GCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCGCACAGCTGAACCCTaGGCAGGACAGAGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: PDPHKLRAQWRFADKTACRTAEP*AGQRGA
Trigger: CGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGGCACCTGTCTTCACTaGCCAGCTCCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLGTCLH*PAPRAG
Trigger: GCCTGCCCGAGGAGCTGGCCAGTGAAGACAGGTGCC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCGGCACCTGTCTTCACTaGCAGGCACCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPGTCLH*QAPVFT
Trigger: AGTGAAGACAGGTGCCTGCCAGTGAAGACAGGTGCC...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCTGGCTAGAGGCCCCTaGCCAGACCCAAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHLARGP*PDPSRT
Trigger: CGTCCTGCTTGGGTCTGGCCAGGGGCCTCTAGCCAG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCAATGGGCTGCCGGTTaGGGACATCGCCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLQWAAG*GHRRGP
Trigger: TGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACGGGGCAGCTTGGTCTTaGCGAGCTCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHGAAWS*RAPGWC
Trigger: GCACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCC...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGCCGCATCAGCTCCCTaGGCATCTTCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHAASAP*ASSAWR
Trigger: TCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGCCTCCTCCCAGCTTTaGTGTGCGGTCGCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHASSQL*CAVAAQ
Trigger: TTGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAACGTTGGGAGCGGTCTaGAGGGGCAACCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTTLGAV*RGNLAS
Trigger: GGAGGCCAGGTTGCCCCTCCAGACCGCTCCCAACGT...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCGTCCCTGGCTGGCACTaGCTTCCGGCACGTTCATAC +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPVPGWH*LPARSY
Trigger: GTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACTCAGCACTGGATGGCTaGCCAGCTTCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHSALDG*PASPGG
Trigger: GCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGA...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGGCCACCTTGAGCTCTaGCCGGAGGGTGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTGHLEL*PEGDGW
Trigger: CCAGCCATCACCCTCCGGCCAGAGCTCAAGGTGGCC...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTC +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTRHQPM*RDLTDV
Trigger: GACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCG...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCCTGGGCCTTCAGATaGGGGTGGGAAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PDPHKLRAQWRFADKTACPWAFR*GWEASG
Trigger: GCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGG...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCGCTCTGGCCGGAGGGTaGTGGCTGGCTTTGCATGAG +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSAALAGG*WLALHE
Trigger: CTCATGCAAAGCCAGCCATCACCCTCCGGCCAGAGC...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGTCGATGCTGAACAGGTaGAGGGCCACGGACACCGTG +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQSMLNR*RATDTV
Trigger: CACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGA...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGTCGATGCTGAACAGGTaGAGGGCCACGGACACCGTG +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGSMLNR*RATDTV
Trigger: CACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGA...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGTCCAGGGCCAGCTCGTaGTCCGACTGTACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVSRASS*SDCTSS
Trigger: AGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGA...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGAGGGCTCGATGTCGTaGAGGAACAGCAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLEGSMS*RNSSSG
Trigger: GCCCGAGCTGCTGTTCCTGCACGACATCGAGCCCTC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGVSTGP*RPSFRV
Trigger: CACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGAC...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGCCCGCTGGGAGCTCTaGTCTCAGGAATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLARWEL*SQESPA
Trigger: TGCTGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCACGTCTGCGTCCCTTTaGACCTGTCCCGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPTSASL*TCPDSS
Trigger: GCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGT...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHAVPDV*VPLHLS
Trigger: GGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVAVPDV*VPLHLS
Trigger: GGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGC...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGGTGTGTAAACGGGAGTaGGGCTCAGACCACGGACTC +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRVCKRE*GSDHGL
Trigger: GAGTCCGTGGTCTGAGCCGCACTCCCGTTTACACAC...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGTCGGCCACAGCATCTaGAGGGTTCCGCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWVGHSI*RVPRCL
Trigger: GAGACACCGCGGAACCCTGCAGATGCTGTGGCCGAC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGACAGCCTGCCCGTCTaGCCTTCTTCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLDSLPV*PSSRLP
Trigger: GGGAAGCCGAGAAGAAGGGCAGACGGGCAGGCTGTC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGCAGACAAGACAGCCTaGCCGTCTGCCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSADKTA*PSALLL
Trigger: GAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAGTTTCGTTCCGAGATaGCTGGGGAGTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPSFVPR*LGSFSG
Trigger: GCCAGAGAAACTCCCCAGGCATCTCGGAACGAAACT...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTGCGCCTCCGGCTTTCTaGGGGTCCGGCAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSAPPAF*GSGRGT
Trigger: CGTGCCCCTGCCGGACCCGCAGAAAGCCGGAGGCGC...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGAACATCACCGCCCCGTaGATCACCCACAGGCGCATG +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRNITAP*ITHRRM
Trigger: CATGCGCCTGTGGGTGATGCACGGGGCGGTGATGTT...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCCCGCAGCTGGAGCATaGGCTCCTCTCTGCCCTATC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLPAAGA*APLCPI
Trigger: GATAGGGCAGAGAGGAGCCCATGCTCCAGCTGCGGG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS-3UTR CCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCTGGCTAGAGGCCCCTaGCCAGACCCAAGCAGGACG +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQLARGP*PDPSRT
Trigger: CGTCCTGCTTGGGTCTGGCCAGGGGCCTCTAGCCAG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCAATGGGCTGCCGGTTaGGGACATCGCCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQQWAAG*GHRRGP
Trigger: TGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCCGGCAGAGAAGGCGTaGATGTTGAGGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQPAEKA*MLRAMS
Trigger: GGACATGGCCCTCAACATCCACGCCTTCTCTGCCGG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCACGACTGTACCTCGTCTaGGAAGGCAGGGACGCCGTG +
Preference number: 4 (lower is better)
Translates to: AQDRGARTAAHATNIHLARLYLV*EGRDAV
Trigger: CACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCG...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCGGGGCAGCTTGGTCTTaGCGAGCTCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PDPHKLRAQWRFADKTACGAAWS*RAPGWC
Trigger: GCACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCC...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCCGAGGGCGTCTTTTGTaGGGGAGCCACTTCCGTTTG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPRGRLL*GSHFRL
Trigger: CAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCG...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCTCAGCACCACGGCGTTaGCGCGCCGGTAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGSAPRR*RAGSGS
Trigger: GCTACCGCTACCGGCGCGCCAACGCCGTGGTGCTGA...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACACGAGCGGGGTCACATaGCTGGGCGCAGACACACTC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHTSGVT*LGADTL
Trigger: GAGTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGT...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCACGACTACTGAATTGTaGCTATGGGGGCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPTTTEL*LWGRRG
Trigger: GCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGT...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCAGCCCTCTGCGATCCTaGGACACCGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGSPLRS*DTVAWQ
Trigger: CTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCT...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGCCACGGGGCTCCCGCTaGCCGGAGGGCTCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQPRGSR*PEGSQQ
Trigger: TTGCTGCGAGCCCTCCGGCCAGCGGGAGCCCCGTGG...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCCACGGGGCTCCCGCTaGCCGGAGGGCTCGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSPRGSR*PEGSQQ
Trigger: TTGCTGCGAGCCCTCCGGCCAGCGGGAGCCCCGTGG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGAGTCACGCCTGTCCCTaGCTGGCACTGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: APPSSPLVAAGTASCSALSHACP*LALASG
Trigger: GCCGGAAGCCAGTGCCAGCCAGGGACAGGCGTGACT...CAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCAGAAGGCGTGGATGTTaGGGGCCATGTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASRRRGC*GPCPAP
Trigger: AGGAGCAGGACATGGCCCTCAACATCCACGCCTTCT...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCGCTCCTCGTCGATGCTaGACAGGTGCAGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGAPRRC*TGAGPR
Trigger: CCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGC...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGAGGCCACCATGGGGATaGCGCGGACAGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLRPPWG*RGQSPR
Trigger: CCGTGGGGACTGTCCGCGTCATCCCCATGGTGGCCT...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPGPPSA*ASARWA
Trigger: AGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCC...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGTGCAGGGGAGGGGTTaGGGCCAAAGATGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLVQGRG*GQRCRD
Trigger: GTCACGACATCTTTGGCCTCAACCCCTCCCCTGCAC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGGGCAGCACACAGCACTaGCGTGTTCAGTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQGSTQH*RVQWQV
Trigger: AACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCC...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCAACTCGGAACTGAACTaGCACCTCTCCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTNSELN*HLSQVV
Trigger: CACCACCTGGGAGAGGTGTCAGTTCAGTTCCGAGTT...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCGGGTCCGGAACCAGCTaGCCAGGAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGGSGTS*PGRSGS
Trigger: GGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCC...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGGCGCTGCGCTCCTGCTaGGGGCTGTACTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLALRSC*GLYCSS
Trigger: CGAGGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGC...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTCAGCGCTGCGCTCCTaGTGCGGGCTGTACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVSALRS*CGLYCS
Trigger: GGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGCTGA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGCGGTGTCCGGCACGTaGAATGCCGAGTCGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLAVSGT*NAESLL
Trigger: CAAAAGCGACTCGGCATTGCACGTGCCGGACACCGC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGTGCCGCTGCCGCTTCTaGATGTCGTACAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLCRCRF*MSYRSL
Trigger: GAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCA...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGACGGGCAGTAGGAGATaGTCATGGAGACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRTGSRR*SWRRCP
Trigger: TGGGCATCGTCTCCATGAGCATCTCCTACTGCCCGT...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCCTCCCAGCTTTGGTGTaGGGTCGCTGCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSALPALV*GRCPRT
Trigger: TGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGCTGGCAGACACACCGTaGGTGAGCAGGTACCCAACT +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVLADTP*VSRYPT
Trigger: AGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAG...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGCTGGCAGACACACCGTaGGTGAGCAGGTACCCAACT +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGLADTP*VSRYPT
Trigger: AGTTGGGTACCTGCTCACGCACGGTGTGTCTGCCAG...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGGCAGACAAGACAGCCTaGCCGTCTGCCCTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGADKTA*PSALLL
Trigger: GAGAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGC...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCGCCCCGCCTTGTTACTaGATCCGTCTGAGGTACAAG +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPAPPCY*IRLRYK
Trigger: CTTGTACCTCAGACGGATGCAGTAACAAGGCGGGGC...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCGTCATGATGCCAGTCTaGCGACAGACCCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPVMMPV*RQTQER
Trigger: CCTTTCCTGGGTCTGTCGGCAGACTGGCATCATGAC...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCCGGCAGAGAAGGCGTaGATGTTGAGGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWPAEKA*MLRAMS
Trigger: GGACATGGCCCTCAACATCCACGCCTTCTCTGCCGG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTACCAGCACGTAGCCGATaGCTCCGCCGAGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLPARSR*LRRGRQ
Trigger: CTGCCGGCCTCGGCGGAGCCATCGGCTACGTGCTGG...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCGAGGGCGTCTTTTGTaGGGGAGCCACTTCCGTTTG +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQRGRLL*GSHFRL
Trigger: CAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAGCACCACGGCGTTaGCGCGCCGGTAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPSAPRR*RAGSGS
Trigger: GCTACCGCTACCGGCGCGCCAACGCCGTGGTGCTGA...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTCAGCACCACGGCGTTaGCGCGCCGGTAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLSAPRR*RAGSGS
Trigger: GCTACCGCTACCGGCGCGCCAACGCCGTGGTGCTGA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGCCGCATCAGCTCCCTaGGCATCTTCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRAASAP*ASSAWR
Trigger: TCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGC...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGAGACGTTGGGAAACATaGCCATCACGGCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PSAILGHRGLADTPCVSRRRWET*PSRLCR
Trigger: TCGGCACAGCCGTGATGGCCATGTTTCCCAACGTCT...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCTGGCGACGTAGACGTTaGGAAACATGGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPWRRRR*ETWPSR
Trigger: CCGTGATGGCCATGTTTCCCAACGTCTACGTCGCCA...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGTGCCAAACCCTCGCTTaGAGTTCCCGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLCQTLA*SSRGCG
Trigger: ACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCA...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGATCACCAGGAATGTaGCCGTCAGGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSRSPGM*PSGSPG
Trigger: TCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCT...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGCCTGGGCAGGGTGTCTaGGAGCCACCCCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: APPSSPLVAAGTASCSALPGQGV*EPPLQI
Trigger: GATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGG...CAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCTCTGGAGGGGCAACCTaGCCTCCTAGGAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASSGGAT*PPRRVL
Trigger: AAGGACTCTCCTAGGAGGCCAGGTTGCCCCTCCAGA...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCAGGCGAGGAAGGCATaGAGTTCCGACAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQQARKA*SSDRFQ
Trigger: CTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCAGCCCTCTGCGATCCTaGGACACCGTGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVSPLRS*DTVAWQ
Trigger: CTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCT...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGGCTTTGGTGAGCCCTaGATCCGGCCCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVGFGEP*IRPLGL
Trigger: AAGGCCCAGGGGCCGGATCCAGGGCTCACCAAAGCC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACAAAGATGTCGTGACCTaGTCCCCGCTGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHKDVVT*SPLWPG
Trigger: GCCTGGCCACAGCGGGGACCAGGTCACGACATCTTT...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTCAGCACTGGATGGCTaGCCAGCTTCCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVSALDG*PASPGG
Trigger: GCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCTTGGAGGCAGGGAGCTaGTGTCTCTCAGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSALEAGS*CLSEAA
Trigger: CGCCGCTTCTGAGAGACACCAGCTCCCTGCCTCCAA...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGAGGTTCTGTGTGCATaGAGGAAATCAGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHEVLCA*RKSGRR
Trigger: GCGGCGCCCTGATTTCCTCCATGCACACAGAACCTC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTGCTTTCCCCATAGATaGTGCTGTCCCTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWCFPHR*CCPCRP
Trigger: AGGGCGGCAGGGACAGCATCATCTATGGGGAAAGCA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR TCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCGGTGGCATCGGCGCTaGAGTCCAGGACCACCACTC +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLRWHRR*SPGPPL
Trigger: GAGTGGTGGTCCTGGACTTCAGCGCCGATGCCACCG...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGCCTTGGCGGCTTCCTTaGGGAAGGTGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQPWRLP*GRWPGG
Trigger: CCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGG...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTGCTGCGCGACGGCTTaGTCAGCACCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLCCATA*SAPRRW
Trigger: CCAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGCAGTGGCGGCATAAATaGCCAGGCCCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVQWRHK*PGPSSP
Trigger: TGGGCTGCTGGGGCCTGGTCATTTATGCCGCCACTG...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGCTACCCTACGACTACTaGATTGTGGCTATGGGGGCG +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRLPYDY*IVAMGA
Trigger: CGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAG...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR TCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCGTTTGGGTCGGATCTTaGTTCGGGTCAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSAVWVGS*FGSGHC
Trigger: GCAGTGGCCTGACCCGAATCAAGATCCGACCCAAAC...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGAGGAATCGGCTTTGGTaGGCCCTGGATCCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVRNRLW*ALDPAP
Trigger: AGGGGCCGGATCCAGGGCTCACCAAAGCCGATTCCT...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGAAGTGCTGACAGCTTaGCGAGTCTACAAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: RTAEPCAGQRGADSSACHEVLTA*RVYKVC
Trigger: GCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTACCCGAGCTGCAGCCTaGCCCACACAAGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSTRAAA*PTQAAG
Trigger: GCCCGCAGCTTGTGTGGGTCAGGCTGCAGCTCGGGT...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCACCAGGGAACGTCATaGTGCCAGTCTGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHHQGTS*CQSADR
Trigger: TCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCGTCCCTGCCGCCCTGTaGCAGGCACCTCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSVPAAL*QAPPSN
Trigger: GTTGCTGGGAGGTGCCTGGCACAGGGCGGCAGGGAC...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCGCCGTTAAGGAAAAGTaGAACGCCAAAGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPAVKEK*NAKEDA
Trigger: GGCGTCCTCTTTGGCGTTGCACTTTTCCTTAACGGC...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCTGCTGCGGGCTGTACTaGTCCTCGTCGATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSACCGLY*SSSMLN
Trigger: GTTCAGCATCGACGAGGAGCAGTACAGCCCGCAGCA...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCGTCCGGCACGTGCAATaGCGAGTCGCTTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGVRHVQ*RVAFAA
Trigger: CGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGAC...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGTGCCGCTGCCGCTTCTaGATGTCGTACAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: APPSSPLVAAGTASCSALCRCRF*MSYRSL
Trigger: GAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCA...CAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTGGCCATCACGGCTGTaGCGACAGAGAAGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVWPSRL*RQRSPA
Trigger: CGCTGGGCTTCTCTGTCGGCACAGCCGTGATGGCCA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGAGCAGGTACCCAACTaGCACCCGGACACAAACACA +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPREQVPN*HPDTNT
Trigger: TGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTC...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCCGAGTCTACAAAGTGTaGAGCCACCGACTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPRVYKV*SHRLLS
Trigger: TGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCG...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCACAGACACCCGAGCTaGAGCCTGACCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQHRHPS*SLTHTS
Trigger: GCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGTTCCAGCCCTCTTGTTaGTGCAGGGACGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWFQPSC*CRDGFL
Trigger: CAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAA...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGGCACTCCCCGCAGCTaGAGCATGGGCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPGTPRS*SMGSSL
Trigger: CAGAGAGGAGCCCATGCTCCAGCTGCGGGGAGTGCC...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGCAGATAGGCACGGATaGGCCCCTCGGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGADRHG*APRWHR
Trigger: CCGATGCCACCGAGGGGCCCATCCGTGCCTATCTGC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCGACTGTACCTCGTCTaGGAAGGCAGGGACGCCGTG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVRLYLV*EGRDAV
Trigger: CACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGAGGCGTCGTGGAAGATaGAGGGCTCGATGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLRRRGR*RARCRA
Trigger: TGCACGACATCGAGCCCTCCATCTTCCACGACGCCT...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGAGTTCCCGGGGCTGTaGTGGATGTACTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHEFPGL*WMYCLM
Trigger: CATCAAGCAGTACATCCACCACAGCCCCGGGAACTC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCTTTCTGCTCCTCCTTaGCCTCCTCTGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHLSAPP*PPLTRW
Trigger: CCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAG...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCCTGGGCAGGGTGTCTaGGAGCCACCCCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVPGQGV*EPPLQI
Trigger: GATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAACGTTGGGAGCGGTCTaGAGGGGCAACCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGTLGAV*RGNLAS
Trigger: GGAGGCCAGGTTGCCCCTCCAGACCGCTCCCAACGT...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGTCAGCCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGTTCTGCACTCCCAGCTaGCGAGGAATCGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SQPSAILGHRGLADTPCVFCTPS*RGIGFG
Trigger: ACCAAAGCCGATTCCTCGCCAGCTGGGAGTGCAGAA...CACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGGCTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACAAGCTGCGGGCGCAATaGCGCTTTGCAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHKLRAQ*RFADKT
Trigger: TGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTT...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGTCCTCAGCACTGGATaGCTGGCCAGCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVVLSTG*LASFPR
Trigger: CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGAC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCTCTGGGGTTCTAGGTaGTCACAGACCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHLWGSR*SQTKSS
Trigger: GGAGGACTTGGTCTGTGACCACCTAGAACCCCAGAG...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCTCGTTCCGAGATGCCTaGGGAGTTTCTCTGGCAACG +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASSFRDA*GVSLAT
Trigger: CGTTGCCAGAGAAACTCCCCAGGCATCTCGGAACGA...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 72 bp ACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAGCGTCGAGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TRALAVPDVCVP*HLSRFQRRAGE
Trigger: CTCACCTGCTCGACGCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
3UTR CAA 72 bp AGCCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTaGCAGACAAGACAGCCTGCCCGTCTGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLTHTSCGRNGA*QTRQPARLPFF
Trigger: GAAGAAGGGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCCCAGCAGCCCATCTTaGCCCCGGCGTTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLPSSPS*PRRCRL
Trigger: AAGCCTACAACGCCGGGGTCAAGATGGGCTGCTGGG...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGGGTGGATGTACTGCTTaGTGTCATGGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGGGCTA*CHGTGP
Trigger: TGGGCCAGTACCATGACATCAAGCAGTACATCCACC...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCCCGACACACCCTGCCTaGCACTCCACTCAGTGTGCA +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGPTHPA*HSTQCA
Trigger: TGCACACTGAGTGGAGTGTCAGGCAGGGTGTGTCGG...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGAGAGAGGTGGGAAGGTaGTACAAACAGGTGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLREVGR*YKQVVR
Trigger: GCGGACCACCTGTTTGTATCACCTTCCCACCTCTCT...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGGAACATTCCGCAGCTaGTGTCCTGTCTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVGTFRS*CPVSGP
Trigger: CGGCCCTGAGACAGGACAGCAGCTGCGGAATGTTCC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGGCCGTTAAGGAAAAGTaGAACGCCAAAGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGAVKEK*NAKEDA
Trigger: GGCGTCCTCTTTGGCGTTGCACTTTTCCTTAACGGC...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGGGTCCGGAACCAGCTaGCCAGGAAGGTCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQGSGTS*PGRSGS
Trigger: GGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTCCAGGGCCAGCTCGTaGTCCGACTGTACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVSRASS*SDCTSS
Trigger: AGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGAAGGTGCTGGAGGCCTaGCTGCGGAACGCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSKVLEA*LRNACR
Trigger: GCGGCACGCGTTCCGCAGGCAGGCCTCCAGCACCTT...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGAGTGGGACCCAAGCTTaGCGTAGTAGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWSGTQA*RSRRRC
Trigger: GCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACT...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CGAGGTGAGGAAGCCAGGGGTGCCGTCCCCCAGAGAAGAAGGGCCACAGTGCCCGGATGGCACAATCTATaGCAAACCCTCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGEEARGAVPQRRRATVPGWHNL*QTLAWS
Trigger: ACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCC...GGGCACTGTGGCCCTTCTTCTCTGGGGGACGGCACCCCTGGCTTCCTCACCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGAGGCCACCAGGATCTaGGAGATGTACACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTEATRI*EMYTWQ
Trigger: CTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTC...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSVSTGP*RPSFRV
Trigger: CACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGAC...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACATACTCTCCAACAGCTaGGGCACCAGCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHILSNS*GTSQCD
Trigger: GTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTAT...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAAACCTACCCTACGACTACTGAATTGTGGCTATGGGGGCGGAGGGGCTCTGTTGGTGTGCGGTCGCTaGCCAAGGACAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LKPTLRLLNCGYGGGGALLVCGR*PRTGLP
Trigger: GGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAA...CAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCGCTGTCCCAGACGTCTaGGTCCCTTTGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGAVPDV*VPLHLS
Trigger: GGACAGGTGCAAAGGGACGCAGACGTCTGGGACAGC...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCCAACCGACACACCCTaGCTGACACTCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGPTDTP*LTLHSV
Trigger: CACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTACGGCACAGAGCGACGTaGCCCTGGCAGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLRHRAT*PWQHCG
Trigger: TCCACAGTGCTGCCAGGGGCACGTCGCTCTGTGCCG...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCTCCGGAAGGCCAATCTaGAACAGTATTGGTGTGACC +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSSGRPI*NSIGVT
Trigger: GGTCACACCAATACTGTTGCAGATTGGCCTTCCGGA...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGGCACTCCCCGCAGCTaGAGCATGGGCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQGTPRS*SMGSSL
Trigger: CAGAGAGGAGCCCATGCTCCAGCTGCGGGGAGTGCC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTCGACTGTACCTCGTCTaGGAAGGCAGGGACGCCGTG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPRLYLV*EGRDAV
Trigger: CACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCG...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGCTTCGTGTCCACCCTaGTGTAGCCGCCGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQASCPP*CSRRGR
Trigger: ACGCCCTCGGCGGCTACACCAGGGTGGACACGAAGC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGTGTCCCCGCTGGAGGTaGTGGCCCCGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSCPRWR*WPRSGS
Trigger: GGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACA...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCATCTCGGTGTCCCCGCTaGAGGTGGTGGCCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAASRCPR*RWWPRS
Trigger: AGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGA...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAAGACGTTGGGAAACATaGCCATCACGGCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTRRWET*PSRLCR
Trigger: TCGGCACAGCCGTGATGGCCATGTTTCCCAACGTCT...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGTGGCGACGTAGACGTTaGGAAACATGGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLWRRRR*ETWPSR
Trigger: CCGTGATGGCCATGTTTCCCAACGTCTACGTCGCCA...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCTGGCGACGTAGACGTTaGGAAACATGGCCATCACGG +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSAWRRRR*ETWPSR
Trigger: CCGTGATGGCCATGTTTCCCAACGTCTACGTCGCCA...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCTTCCCGGGGCTGTGGTaGATGTACTGCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: ATSPTPAASSALDGWPASFPGLW*MYCLMS
Trigger: TGACATCAAGCAGTACATCCACCACAGCCCCGGGAA...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTGGCTTTGGTGAGCCCTaGATCCGGCCCCTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSGFGEP*IRPLGL
Trigger: AAGGCCCAGGGGCCGGATCCAGGGCTCACCAAAGCC...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGATGGGAGAGCCGAGGGTaGCCTGCAGCTCCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRWESRG*PAAPPS
Trigger: GGAAGGGGGAGCTGCAGGCCACCCTCGGCTCTCCCA...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTCACACGCTGTGTGGTaGCTAAAGCTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTSHAVW*LKLDQS
Trigger: ACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGA...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCCCTCACACGCTGTGTaGTGGCTAAAGCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWPSHAV*WLKLDQ
Trigger: TTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTTGGAGGCAGGGAGCTaGTGTCTCTCAGAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVLEAGS*CLSEAA
Trigger: CGCCGCTTCTGAGAGACACCAGCTCCCTGCCTCCAA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCACCAGAGCGGTTTCCATaGCGTAACAGAACTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AQDRGARTAAHATNIHLAPERFP*RNRTPC
Trigger: GCAGGGAGTTCTGTTACGCCATGGAAACCGCTCTGG...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGGCACGTAGATCACCCTaGCGCTCAGGTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQARRSP*RSGRSC
Trigger: ACAACTACGACCTGAGCGTCAGGGTGATCTACGTGC...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGGTGGATGTACTGCTTaGTGTCATGGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTGGCTA*CHGTGP
Trigger: TGGGCCAGTACCATGACATCAAGCAGTACATCCACC...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGACAGACACACCGTGCGTaGGCAGGTACCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGQTHRA*AGTQLP
Trigger: TGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTG...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAAGGGACAAACGAGGCTaGCTCCGCAGCAGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLRDKRG*LRSSSP
Trigger: GGGACTGCTGCTGCGGAGTCAGCCTCGTTTGTCCCT...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACATGTTCAACTCGGAACTaGACTGACACCTCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTCSTRN*TDTSPR
Trigger: CCTGGGAGAGGTGTCAGTTCAGTTCCGAGTTGAACA...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAAGGGCGCCGCACAGCTaGACCCTGCGCAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGRAPHS*TLRRTE
Trigger: CTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTGCTGCGGGCTGTACTaGTCCTCGTCGATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVCCGLY*SSSMLN
Trigger: GTTCAGCATCGACGAGGAGCAGTACAGCCCGCAGCA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTGCGCTGCGCTCCTGCTaGGGGCTGTACTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSALRSC*GLYCSS
Trigger: CGAGGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGC...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGAGTGGGACCCAAGCTTaGCGTAGTAGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQSGTQA*RSRRRC
Trigger: GCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACT...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACATACTCTCCAACAGCTaGGGCACCAGCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHILSNS*GTSQCD
Trigger: GTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTAT...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCTCCCAGCTTTGGTGTaGGGTCGCTGCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLLPALV*GRCPRT
Trigger: TGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCTCTGGGAGCCACCCCTaGAAATCACTGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGSGSHP*KSLSSA
Trigger: GGCAGAAGACAGTGATTTGCAGGGGTGGCTCCCAGA...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACAATCTACAAAGTaGCACCAGCGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQTQSTK*HQRQET
Trigger: TGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGT...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCCCTCATTTGGGCTCTaGACACTGACCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLPSFGL*TLTCTL
Trigger: TAGTGTGCAGGTCAGTGTGCAGAGCCCAAATGAGGG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTCTGACCCACACAAGCTaGGGGCGCAATGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPLTHTS*GRNGAL
Trigger: CAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAG...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCTTCCAGCCCTCTTGTTaGTGCAGGGACGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGFQPSC*CRDGFL
Trigger: CAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAA...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGGAGCCGAGGGTGGCCTaGAGCTCCCCCTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQEPRVA*SSPFQP
Trigger: GGGCTGGAAGGGGGAGCTGCAGGCCACCCTCGGCTC...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCGTAACAGAACTCCCTaGCAAACATCACCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGRNRTP*QTSPPR
Trigger: ACGGGGCGGTGATGTTTGGCAGGGAGTTCTGTTACG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTGGCGCCTCAACAGCCTaGCTAGAGGCCCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSGASTA*LEAPGQ
Trigger: CTGGCCAGGGGCCTCTAGCCAGGCTGTTGAGGCGCC...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAAAGAAGAAGAGCACCTaGTTCTGGGTCCGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTKKKST*FWVRNQ
Trigger: CTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTT...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTGCATGGAGCTCGACGTaGCCGAGGGCTTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSAWSST*PRASCP
Trigger: TGGACACGAAGCCCTCGGCCACGTCGAGCTCCATGC...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTACAGCAGGCGCACCGTaGTCTCGCCCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSTAGAP*SRPPPP
Trigger: AGGAGGGGGAGGGCGAGACCACGGTGCGCCTGCTGT...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGCCGCATCAGCTCCCTaGGCATCTTCAGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVAASAP*ASSAWR
Trigger: TCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGGAGTTCCCGGGGCTGTaGTGGATGTACTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQEFPGL*WMYCLM
Trigger: CATCAAGCAGTACATCCACCACAGCCCCGGGAACTC...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCAGGCGAGGAAGGCATaGAGTTCCGACAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVQARKA*SSDRFQ
Trigger: CTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGAACGCCTGTCCCTGGCTaGCACTGGCTTCCGGCACGT +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRTPVPG*HWLPAR
Trigger: ACGTGCCGGAAGCCAGTGCCAGCCAGGGACAGGCGT...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCTGCGTCCTCAGCACTaGATGGCTGGCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSLRPQH*MAGQLP
Trigger: GGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCTGTTCAGTGGCAGGTTaGAGGATTCCAGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSACSVAG*RIPAKA
Trigger: GGCCTTAGCTGGAATCCTCCAACCTGCCACTGAACA...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGCAAGTCCTCCACACCTaGGGCATTCAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGQVLHT*GIQETL
Trigger: GAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTG...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCCTTCCTGTTCAGCTCTaGGGTTCTAGGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: HKLRAQWRFADKTACPSALPVQL*GSRWSQ
Trigger: CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAG...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCTCACCGCCCCAGCAGTaGGAGAGCCGAGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATSPPQQ*ESRGWP
Trigger: AGGCCACCCTCGGCTCTCCCACTGCTGGGGCGGTGA...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGGGCCGCCATCGCTGGTaGCTGCACAAACCATTAGCC +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLGRHRW*LHKPLA
Trigger: GGCTAATGGTTTGTGCAGCCACCAGCGATGGCGGCC...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGAGAAGCGGCGCGTGCTaGTGGGAGGCGGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSRSGAC*WEAEGQ
Trigger: TTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCT...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTACTGTGGCACCAGGCTTaGAGGCAGGGAGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLLWHQA*RQGAGV
Trigger: GACACCAGCTCCCTGCCTCCAAGCCTGGTGCCACAG...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGAGGCCACCTTGAGCTCTaGCCGGAGGGTGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRGHLEL*PEGDGW
Trigger: CCAGCCATCACCCTCCGGCCAGAGCTCAAGGTGGCC...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCCCACAAACATTCACCTaGCAAAGAAACAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPPQTFT*QRNRAE
Trigger: TTCTGCTCTGTTTCTTTGCCAGGTGAATGTTTGTGG...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCCTTGCTACAGAGAGGTaGGAAGGTGATACAAACAGG +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTLATER*EGDTNR
Trigger: CCTGTTTGTATCACCTTCCCACCTCTCTGTAGCAAG...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTAGAAGGCGTGGATGTTaGGGGCCATGTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPRRRGC*GPCPAP
Trigger: AGGAGCAGGACATGGCCCTCAACATCCACGCCTTCT...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGACCCAGCAGCCCATCTTaGCCCCGGCGTTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRPSSPS*PRRCRL
Trigger: AAGCCTACAACGCCGGGGTCAAGATGGGCTGCTGGG...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCAATGTGACGAGATCTaGCAGACGTCAATACCTGCA +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQQCDEI*QTSIPA
Trigger: TGCAGGTATTGACGTCTGTCAGATCTCGTCACATTG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATPASSR*AGEEGM
Trigger: CATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCTCCCCCTTCCAGCCCTCTTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGCCATGTGGAGGGCACTaGATGGCCTTTGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: APPSSPLVAAGTASCSALPCGGH*MAFVVL
Trigger: AAGGACAACAAAGGCCATTCAGTGCCCTCCACATGG...CAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACGTGCAGGGGAGGGGTTaGGGCCAAAGATGTCGTGAC +
Preference number: 4 (lower is better)
Translates to: DESTKCAATDSCHRGAHNVQGRG*GQRCRD
Trigger: GTCACGACATCTTTGGCCTCAACCCCTCCCCTGCAC...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACAGTTACTGCATCCGTCTaGGGTACAAGGTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTVTASV*GTRLEA
Trigger: GGCTTCTAACCTTGTACCTCAGACGGATGCAGTAAC...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACTTCAAGAAACACTCCTaGTGGCTGTTGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHFKKHS*WLLEAT
Trigger: AGTGGCTTCCAACAGCCATCAGGAGTGTTTCTTGAA...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTTTGAGGGCCATGTCCTaGTCCTCGCTGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSLRAMS*SSLSTT
Trigger: CGTGGTGGACAGCGAGGAGCAGGACATGGCCCTCAA...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTGCTGCGGGCTGTACTaGTCCTCGTCGATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLCCGLY*SSSMLN
Trigger: GTTCAGCATCGACGAGGAGCAGTACAGCCCGCAGCA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCTGGTTCCGGTGCCGGTaGTGCCGCTGCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCWFRCR*CRCRFC
Trigger: GCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCA...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCACGGGCAGTAGGAGATaGTCATGGAGACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVTGSRR*SWRRCP
Trigger: TGGGCATCGTCTCCATGAGCATCTCCTACTGCCCGT...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGGATGGCACAATCTATaGCAAACCCTCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWGWHNL*QTLAWS
Trigger: ACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTCTCCCAGCTTTGGTGTaGGGTCGCTGCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSLPALV*GRCPRT
Trigger: TGTCCTTGGGCAGCGACCGCACACCAAAGCTGGGAG...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTCTGGGAGCCACCCCTaGAAATCACTGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVSGSHP*KSLSSA
Trigger: GGCAGAAGACAGTGATTTGCAGGGGTGGCTCCCAGA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCTCTGCACACTGACCTaGACACTAAGAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWLCTLT*TLRRAL
Trigger: CAAAGCCCTTCTTAGTGTGCAGGTCAGTGTGCAGAG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCACAGACACCCGAGCTaGAGCCTGACCCACACAAGC +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSHRHPS*SLTHTS
Trigger: GCTTGTGTGGGTCAGGCTGCAGCTCGGGTGTCTGTG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTCCAACCGACACACCCTaGCTGACACTCCACTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPPTDTP*LTLHSV
Trigger: CACTGAGTGGAGTGTCAGGCAGGGTGTGTCGGTTGG...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTGCAGATAGGCACGGATaGGCCCCTCGGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSADRHG*APRWHR
Trigger: CCGATGCCACCGAGGGGCCCATCCGTGCCTATCTGC...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAAGGCGTCGTGGAAGATaGAGGGCTCGATGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGRRRGR*RARCRA
Trigger: TGCACGACATCGAGCCCTCCATCTTCCACGACGCCT...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCTGTCCCCGCTGGAGGTaGTGGCCCCGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCCPRWR*WPRSGS
Trigger: GGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACA...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTACAGCAGGCGCACCGTaGTCTCGCCCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTTAGAP*SRPPPP
Trigger: AGGAGGGGGAGGGCGAGACCACGGTGCGCCTGCTGT...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCAGATCACCAGGAATGTaGCCGTCAGGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVRSPGM*PSGSPG
Trigger: TCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCT...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCCTCCTCTGACACGTTaGGATAGATCACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWPPLTR*DRSPGM
Trigger: CATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTACGCAGGAGCTCGTCTaGAGCTCACGCTCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGATQELV*SSRSAP
Trigger: GGGGGCGGAGCGTGAGCTCCAGACGAGCTCCTGCGT...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTTCTGGAGGGGCAACCTaGCCTCCTAGGAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPSGGAT*PPRRVL
Trigger: AAGGACTCTCCTAGGAGGCCAGGTTGCCCCTCCAGA...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCACAGGCGAGGAAGGCATaGAGTTCCGACAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPQARKA*SSDRFQ
Trigger: CTGGAACCTGTCGGAACTCCATGCCTTCCTCGCCTG...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCTGTTCAGTGGCAGGTTaGAGGATTCCAGCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: PDPHKLRAQWRFADKTACCSVAG*RIPAKA
Trigger: GGCCTTAGCTGGAATCCTCCAACCTGCCACTGAACA...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTAGGGGCCGCCATCGCTaGTGGCTGCACAAACCATTA +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPRGRHR*WLHKPL
Trigger: TAATGGTTTGTGCAGCCACCAGCGATGGCGGCCCCT...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCATCACACGCTGTGTGGTaGCTAAAGCTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: AQDRGARTAAHATNIHLASHAVW*LKLDQS
Trigger: ACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGA...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCTCCCCATCGAGTGACTaGATGATCTGTCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGSPSSD*MICLLR
Trigger: CCGGAGGAGACAGATCATCCAGTCACTCGATGGGGA...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGTGCTTTCCCCATAGATaGTGCTGTCCCTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQCFPHR*CCPCRP
Trigger: AGGGCGGCAGGGACAGCATCATCTATGGGGAAAGCA...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCGGTGGCATCGGCGCTaGAGTCCAGGACCACCACTC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTRWHRR*SPGPPL
Trigger: GAGTGGTGGTCCTGGACTTCAGCGCCGATGCCACCG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTCTCCTTGGCCTCCTCTaGCACGTTGGGATAGATCAC +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPLLGLL*HVGIDH
Trigger: GTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAG...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAGTTTGGGTCGGATCTTaGTTCGGGTCAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLVWVGS*FGSGHC
Trigger: GCAGTGGCCTGACCCGAATCAAGATCCGACCCAAAC...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCCCTGGGCCTTCAGATaGGGGTGGGAAGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTPWAFR*GWEASG
Trigger: GCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGAAACACCTGAAGTGCTaGCAGCTTGACGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWKHLKC*QLDEST
Trigger: TGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTT...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGGTTACTGCATCCGTCTaGGGTACAAGGTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQVTASV*GTRLEA
Trigger: GGCTTCTAACCTTGTACCTCAGACGGATGCAGTAAC...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACTTCAAGAAACACTCCTaGTGGCTGTTGGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHFKKHS*WLLEAT
Trigger: AGTGGCTTCCAACAGCCATCAGGAGTGTTTCTTGAA...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GCAAGGGATGCCGCTAGGAGGGGTGCTCAGTCCTCCTGGAGGACCCAAGGAGGGAATAGAAGAGAGTCATaGGCGACACGACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: ARDAARRGAQSSWRTQGGNRRES*ATRHFL
Trigger: AAGGAAGTGTCGTGTCGCTCATGACTCTCTTCTATT...CCCTCCTTGGGTCCTCCAGGAGGACTGAGCACCCCTCCTAGCGGCATCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGAAGAGGTGCTGAAGTaGTTTTTCTTGCTACAGAGA +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSEEVLK*FFLLQR
Trigger: TCTCTGTAGCAAGAAAAATCACTTCAGCACCTCTTC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGTTCCGGTGCCGGTGCTaGCGCTGCCGCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGFRCRC*RCRFCM
Trigger: CATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAA...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCACAGACGTCAATACCTaGAGGCGTTCTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVTDVNT*RRSVST
Trigger: GGTGGAGACAGAACGCCTGCAGGTATTGACGTCTGT...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGACACAATCTACAAAGTaGCACCAGCGGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQTQSTK*HQRQET
Trigger: TGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGT...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGATTGCATAGAGTGAGCTaGCACGGACGCCCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGLHRVS*HGRPAE
Trigger: CTCGGCCGGGCGTCCGTGGCAGCTCACTCTATGCAA...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGCCCACACCCCAAGGGTaGCACGAGCCCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGPTPQG*HEPNSS
Trigger: GCTGGAGTTGGGCTCGTGGCACCCTTGGGGTGTGGG...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCCAGCTCGCATTCCTaGACCTGGAAACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPASSHS*TWKLLP
Trigger: TGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGC...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCGGCACAGAGCGACGTaGCCCTGGCAGCACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTRHRAT*PWQHCG
Trigger: TCCACAGTGCTGCCAGGGGCACGTCGCTCTGTGCCG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCCAACGGTATGAGACATaGAGCAACACAGAACGATTT +
Preference number: 4 (lower is better)
Translates to: PAESSRPLPLPASSHSCTQRYET*SNTERF
Trigger: AAATCGTTCTGTGTTGCTGCATGTCTCATACCGTTG...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTGGCACCTGTCTTCACTaGCCAGCTCCTCGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTGTCLH*PAPRAG
Trigger: GCCTGCCCGAGGAGCTGGCCAGTGAAGACAGGTGCC...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACTTGATGTCATGGTACTaGCCCAGCAGGGCGTACGGG +
Preference number: 4 (lower is better)
Translates to: DESTKCAATDSCHRGAHNLMSWY*PSRAYG
Trigger: CCCGTACGCCCTGCTGGGCCAGTACCATGACATCAA...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATACTGCTTGATGTCATaGTACTGGCCCAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPYCLMS*YWPSRA
Trigger: CGCCCTGCTGGGCCAGTACCATGACATCAAGCAGTA...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCTTTCTGCTCCTCCTTaGCCTCCTCTGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLLSAPP*PPLTRW
Trigger: CCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAG...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGACTTTCTGCTCCTCCTTaGCCTCCTCTGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGLSAPP*PPLTRW
Trigger: CCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAG...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGAGTCACGCCTGTCCCTaGCTGGCACTGGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQSHACP*LALASG
Trigger: GCCGGAAGCCAGTGCCAGCCAGGGACAGGCGTGACT...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCTGCGTCCTCAGCACTaGATGGCTGGCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLRPQH*MAGQLP
Trigger: GGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTAGGGGCCGCCATCGCTaGTGGCTGCACAAACCATTA +
Preference number: 4 (lower is better)
Translates to: NQLRRELRLEILTSTARSRGRHR*WLHKPL
Trigger: TAATGGTTTGTGCAGCCACCAGCGATGGCGGCCCCT...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTTCGTTCCGAGATGCCTaGGGAGTTTCTCTGGCAACG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPSFRDA*GVSLAT
Trigger: CGTTGCCAGAGAAACTCCCCAGGCATCTCGGAACGA...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 72 bp TGCTTAGTAGCTCAAACCTACCCTACGACTACTGAATaGTGGCTATGGGGGCGGAGGGGCTCTGGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: CLVAQTYPTTTE*WLWGRRGSGPH
Trigger: GTGCGGGCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAGCTACTAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR TCA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACAAGACTCCATTGATTTaGCCTCAGTGGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHKTPLI*PQWTHK
Trigger: CTTGTGAGTCCACTGAGGTCAAATCAATGGAGTCTT...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGACGCTTTTGCTGCGCATaGTGTCCACGTCCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRRFCCA*CPRPGS
Trigger: ACTACCCGGACGTGGACATCATGCGCAGCAAAAGCG...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACCTCCTTGGCCTCCTCTaGCACGTTGGGATAGATCAC +
Preference number: 4 (lower is better)
Translates to: DESTKCAATDSCHRGAHNLLGLL*HVGIDH
Trigger: GTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAG...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGCAATGTGACGAGATCTaGCAGACGTCAATACCTGCA +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQQCDEI*QTSIPA
Trigger: TGCAGGTATTGACGTCTGTCAGATCTCGTCACATTG...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCA +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGQCDEI*QTSIPA
Trigger: TGCAGGTATTGACGTCTGTCAGATCTCGTCACATTG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTC +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSRHQPM*RDLTDV
Trigger: GACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCG...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCAGACACACCGTGCGTaGGCAGGTACCCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATQTHRA*AGTQLP
Trigger: TGGCAGTTGGGTACCTGCTCACGCACGGTGTGTCTG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGTCCAGAAAATGTTCTTaGAGTCTTGAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRSRKCS*SLESQP
Trigger: GGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGA...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTTCAAGTTGCATAGAGTaGGCTGCCACGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSSSCIE*AATDAR
Trigger: CCGGGCGTCCGTGGCAGCTCACTCTATGCAACTTGA...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTTGCTTGCAAACACCTaGAGTGCTGACAGCTTGACG +
Preference number: 4 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVLLANT*SADSLT
Trigger: CGTCAAGCTGTCAGCACTTCAGGTGTTTGCAAGCAA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGTAATCCCCATCGAGTaGCTGGATGATCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVVIPIE*LDDLSP
Trigger: AGGAGACAGATCATCCAGTCACTCGATGGGGATTAC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGCAACAGTATTGGTGTaGCCAGAGCGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGATVLV*PERFPW
Trigger: CCATGGAAACCGCTCTGGTCACACCAATACTGTTGC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCACGATGCCAATGGGCTaGCGGTTGGGGACATCGCCG +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCTMPMG*RLGTSP
Trigger: CGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGT...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTGCTGGAGGCCTGCCTaGGGAACGCGTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWCWRPA*GTRAAA
Trigger: GGCGGCGGCACGCGTTCCGCAGGCAGGCCTCCAGCA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTTGCCGGTGCTGCCGCTaGCGCTTCTGCATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGACRCCR*RFCMSY
Trigger: GTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCA...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCGAGGCCACCAGGATCTaGGAGATGTACACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSEATRI*EMYTWQ
Trigger: CTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTC...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAAACCTACCCTACGACTACTGAATTGTGGCTATGGGGGCGGAGGGGCTCTGTCTGGGAGCCACCCCTaGAAATCACTGTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LKPTLRLLNCGYGGGGALSGSHP*KSLSSA
Trigger: GGCAGAAGACAGTGATTTGCAGGGGTGGCTCCCAGA...CAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGACGTCTGCGTCCCTTTaGACCTGTCCCGATTCCAGC +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSTSASL*TCPDSS
Trigger: GCTGGAATCGGGACAGGTGCAAAGGGACGCAGACGT...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTTCAGTAGTCGGACTTaGCCTGTCCAAGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVFSSRT*PVQARD
Trigger: ATCTCGTGCTTGGACAGGGCAAGTCCGACTACTGAA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTTCCGGGTCGGCATTCTaGGGAGCCATTTTCATTACC +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPSGSAF*GAIFIT
Trigger: GGTAATGAAAATGGCTCCGCAGAATGCCGACCCGGA...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTAAGAAGAAGAGCACCTaGTTCTGGGTCCGGAACCAG +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPKKKST*FWVRNQ
Trigger: CTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTT...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAAGGCGTCGTGGAAGATaGAGGGCTCGATGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAARRRGR*RARCRA
Trigger: TGCACGACATCGAGCCCTCCATCTTCCACGACGCCT...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGGAGCCACTTCCGTTTaGGACTTTAGCTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWGATSV*DFSFIQ
Trigger: TTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGGCATGGAGCTCGACGTaGCCGAGGGCTTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGAWSST*PRASCP
Trigger: TGGACACGAAGCCCTCGGCCACGTCGAGCTCCATGC...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTTCCCGGGGCTGTGGTaGATGTACTGCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLFPGLW*MYCLMS
Trigger: TGACATCAAGCAGTACATCCACCACAGCCCCGGGAA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGAGTTCCCGGGGCTGTaGTGGATGTACTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQEFPGL*WMYCLM
Trigger: CATCAAGCAGTACATCCACCACAGCCCCGGGAACTC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCCTCCTCTGACACGTTaGGATAGATCACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVPPLTR*DRSPGM
Trigger: CATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 4 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTACTGAATTGTGGCTATaGGGGCGGAGGGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSTELWL*GRRGSG
Trigger: GCCAGAGCCCCTCCGCCCCCATAGCCACAATTCAGT...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGAACCCACATTTGGTGTaGTTTGGGTCGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWNPHLV*FGSDLD
Trigger: ATCAAGATCCGACCCAAACCACACCAAATGTGGGTT...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCGCCTCAGGCAAGGGGTaGCCCCCAGATGAACCCACA +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCASGKG*PPDEPT
Trigger: TGTGGGTTCATCTGGGGGCCACCCCTTGCCTGAGGC...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGATGCGGTCCCCTCATTTaGGCTCTGCACACTGACCTG +
Preference number: 4 (lower is better)
Translates to: TATRTQTHNLQSATSGRRCGPLI*ALHTDL
Trigger: CAGGTCAGTGTGCAGAGCCCAAATGAGGGGACCGCA...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTAAAGATGTCGTGACCTaGTCCCCGCTGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSKDVVT*SPLWPG
Trigger: GCCTGGCCACAGCGGGGACCAGGTCACGACATCTTT...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCAAGAAGCGAAACAGCGTaGGAAAAGGTGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: AQDRGARTAAHATNIHLARSETA*EKVSIF
Trigger: AAAGATGGACACCTTTTCCCACGCTGTTTCGCTTCT...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGGAGGTTCTGTGTGCATaGAGGAAATCAGGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSEVLCA*RKSGRR
Trigger: GCGGCGCCCTGATTTCCTCCATGCACACAGAACCTC...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAAGAAGGCGTGGATGTTaGGGGCCATGTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGRRRGC*GPCPAP
Trigger: AGGAGCAGGACATGGCCCTCAACATCCACGCCTTCT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGAGGCCACCATGGGGATaGCGCGGACAGTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKERPPWG*RGQSPR
Trigger: CCGTGGGGACTGTCCGCGTCATCCCCATGGTGGCCT...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGCCCGGCCGAGGTaGGGAAGCCAGGGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPDARPR*GSQGCR
Trigger: ACGGCACCCCTGGCTTCCTCACCTCGGCCGGGCGTC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCTGCGCCTCGAGATCCTaGCAAGTACAGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATCASRS*QVQPGL
Trigger: GAGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCA...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGGGGGTGGCCCCCAGATaGACCCACATTTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQGVAPR*THIWCG
Trigger: ACCACACCAAATGTGGGTTCATCTGGGGGCCACCCC...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGAATAGAAGAGAGTCATaGGCGACACGACACTTCCTT +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQNRRES*ATRHFL
Trigger: AAGGAAGTGTCGTGTCGCTCATGACTCTCTTCTATT...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTTCGATGCTGAACAGGTaGAGGGCCACGGACACCGTG +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGASMLNR*RATDTV
Trigger: CACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGA...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGGCGCTGCGCTCCTGCTaGGGGCTGTACTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKEALRSC*GLYCSS
Trigger: CGAGGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGC...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTGTTCCCACCGGCCCTaGCTTCGCCGGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWCSHRP*LRRPTG
Trigger: CCCCGTTGGCCGGCGAAGGCAGGGCCGGTGGGAACA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGTGTTCCCACCGGCCCTaGCTTCGCCGGCCAACGGGG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVCSHRP*LRRPTG
Trigger: CCCCGTTGGCCGGCGAAGGCAGGGCCGGTGGGAACA...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAATACTCTCCAACAGCTaGGGCACCAGCCAATGTGAC +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLILSNS*GTSQCD
Trigger: GTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTAT...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACAGAGACGAATCAAAGTaGAGTGAAAGTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHRDESK*SESQRF
Trigger: GAAACGTTGACTTTCACTGCACTTTGATTCGTCTCT...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGTACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGGCTCTGGCCCGCACTaGCGGGTCGGCCACAGCATC +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWGSGPH*RVGHSI
Trigger: GATGCTGTGGCCGACCCGGCAGTGCGGGCCAGAGCC...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCGAGTCTACAAAGTGTaGAGCCACCGACTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSRVYKV*SHRLLS
Trigger: TGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTACCCTCATTTGGGCTCTaGACACTGACCTGCACACTA +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLPSFGL*TLTCTL
Trigger: TAGTGTGCAGGTCAGTGTGCAGAGCCCAAATGAGGG...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCACGGTTTCAAGTGAGTaGAATCTGGAAATAATCTCA +
Preference number: 4 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSTVSSE*NLEIIS
Trigger: TGAGATTATTTCCAGATTGCACTCACTTGAAACCGT...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGGGCACCACGGTTTCAAGTGAGTaGAATCTGGAAATAATCTCA +
Preference number: 4 (lower is better)
Translates to: TPAASSALDGWPASPGGTTVSSE*NLEIIS
Trigger: TGAGATTATTTCCAGATTGCACTCACTTGAAACCGT...GGTGCCCCCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTGGCGCAATGGCGCTTTaGAGACAAGACAGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTGAMAL*RQDSLP
Trigger: GGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCC...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCTGACCCACACAAGCTaGGGGCGCAATGGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTLTHTS*GRNGAL
Trigger: CAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGCACCTGGAAACTTCTaGCATGTGTTAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSSATRERHDASLPTDPGAPGNF*HVLRGS
Trigger: GCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGCCAGCTCGCATTCCTaGACCTGGAAACTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAAASSHS*TWKLLP
Trigger: TGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGC...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCCGGCAGAGAAGGCGTaGATGTTGAGGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTPAEKA*MLRAMS
Trigger: GGACATGGCCCTCAACATCCACGCCTTCTCTGCCGG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTTTGATGTCATGGTACTaGCCCAGCAGGGCGTACGGG +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLMSWY*PSRAYG
Trigger: CCCGTACGCCCTGCTGGGCCAGTACCATGACATCAA...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCATACTGCTTGATGTCATaGTACTGGCCCAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAAYCLMS*YWPSRA
Trigger: CGCCCTGCTGGGCCAGTACCATGACATCAAGCAGTA...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCTCTGGAGGGGCAACCTaGCCTCCTAGGAGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATSGGAT*PPRRVL
Trigger: AAGGACTCTCCTAGGAGGCCAGGTTGCCCCTCCAGA...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTACCTGGTCCCCGCTGTaGCCAGGCCGGGCCCACACG +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETTWSPL*PGRAHT
Trigger: CGTGTGGGCCCGGCCTGGCCACAGCGGGGACCAGGT...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTCGCATTCCTGCACCTaGAAACTTCTGCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: VETRTTVRSPPVTRALAVSHSCT*KLLPCV
Trigger: AACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCGGCCGCCATCGCTGGTaGCTGCACAAACCATTAGCC +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCGRHRW*LHKPLA
Trigger: GGCTAATGGTTTGTGCAGCCACCAGCGATGGCGGCC...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCCTTGGCGGCTTCCTTaGGGAAGGTGGCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWPWRLP*GRWPGG
Trigger: CCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGG...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAGCACGTAGATCACCCTaGCGCTCAGGTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGARRSP*RSGRSC
Trigger: ACAACTACGACCTGAGCGTCAGGGTGATCTACGTGC...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCGGCAGCACACAGCACTaGCGTGTTCAGTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCGSTQH*RVQWQV
Trigger: AACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCC...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTAAGCCACTAACCATCTaGGGAGGGCTCAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGAKPLTI*GGLSGP
Trigger: AGGGCCACTGAGCCCTCCTCAGATGGTTAGTGGCTT...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAACTCGGAACTGAACTaGCACCTCTCCCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATNSELN*HLSQVV
Trigger: CACCACCTGGGAGAGGTGTCAGTTCAGTTCCGAGTT...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGGCACGGATAACTCTTaGACTTGCATAGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQGTDNS*TCIDSG
Trigger: CCCGGAATCTATGCAAGTTCAAGAGTTATCCGTGCC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGCCCCAGCTCAGGGTaGACCGGTCACTCGCAGACC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVGPSSG*TGHSQT
Trigger: GGTCTGCGAGTGACCGGTGCACCCTGAGCTGGGGCC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAACGGGCAGTAGGAGATaGTCATGGAGACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGTGSRR*SWRRCP
Trigger: TGGGCATCGTCTCCATGAGCATCTCCTACTGCCCGT...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACATACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAGCACCTGGAAACTTCTaGCATGTGTTAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLAPGNF*HVLRGS
Trigger: GCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGC...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTGCGGACAGCAGCGCATaGCACAAACATTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTADSSA*HKHSPG
Trigger: GCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGC...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGCCAGGCGGGGCAGCTTaGTCTTGGCGAGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPPGGAA*SWRAPG
Trigger: GCCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGG...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCCCCGCTGGAGGTGGTaGCCCCGCTCTGGTTCCGGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPPRWRW*PRSGSG
Trigger: ACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGTGTCCCCGCTGGAGGTaGTGGCCCCGCTCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVCPRWR*WPRSGS
Trigger: GGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACA...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAAACCTACCCTACGACTACTGAATTGTGGCTATGGGGGCGGAGGGGCTCTGTGCGAGATGTACACTTaGCAGGACAGGATGGCACAA +
Preference number: 4 (lower is better)
Translates to: LKPTLRLLNCGYGGGGALCEMYT*QDRMAQ
Trigger: TTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCA...CAGAGCCCCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGGGTAGGTTTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGATCACCAGGAATGTaGCCGTCAGGAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATRSPGM*PSGSPG
Trigger: TCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCT...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGTGCGGTCCCCTCATTTaGGCTCTGCACACTGACCTG +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQCGPLI*ALHTDL
Trigger: CAGGTCAGTGTGCAGAGCCCAAATGAGGGGACCGCA...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCTCTGGGGTTCTAGGTaGTCACAGACCAAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLWGSR*SQTKSS
Trigger: GGAGGACTTGGTCTGTGACCACCTAGAACCCCAGAG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGGGTGATACAAACAGGTaGTCCGCTGGTAATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQGDTNR*SAGNPH
Trigger: ATGGGGATTACCAGCGGACCACCTGTTTGTATCACC...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCTCCTCGTCGATGCTaGACAGGTGCAGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVAPRRC*TGAGPR
Trigger: CCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGTGCTGCGCGACGGCTTaGTCAGCACCACGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPCCATA*SAPRRW
Trigger: CCAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCA...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCGGTGGATGTACTGCTTaGTGTCATGGTACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATGGCTA*CHGTGP
Trigger: TGGGCCAGTACCATGACATCAAGCAGTACATCCACC...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWPASSR*AGEEGM
Trigger: CATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGG...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCAAAACCACCACAAATaGGACCAACATTATCCTAGT +
Preference number: 4 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGQNHHK*DQHYPS
Trigger: ACTAGGATAATGTTGGTCTCATTTGTGGTGGTTTTG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCAGTGGGACCCAAGCTTaGCGTAGTAGGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCSGTQA*RSRRRC
Trigger: GCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACT...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTCCGGTGCCGGTGCTaGCGCTGCCGCTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWFRCRC*RCRFCM
Trigger: CATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAA...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTTGGTTCCGGTGCCGGTaGTGCCGCTGCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETWFRCR*CRCRFC
Trigger: GCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCA...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETVSTGP*RPSFRV
Trigger: CACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGAC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGTTCCGCGGTGTCTCTaGTCCCGCCCATGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPVPRCL*SRPWPG
Trigger: GCCAGGCCATGGGCGGGAGCAGAGACACCGCGGAAC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTGAGCAGGTACCCAACTaGCACCCGGACACAAACACA +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGAEQVPN*HPDTNT
Trigger: TGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCTC...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGACTTACATTCCTCTTTaGACAAGTGGCTATCTCACA +
Preference number: 4 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQTYIPL*TSGYLT
Trigger: TGTGAGATAGCCACTTGTGCAAAGAGGAATGTAAGT...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGCAATGGGCTGCCGGTTaGGGACATCGCCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVQWAAG*GHRRGP
Trigger: TGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTG...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCAGATAGGCACGGATaGGCCCCTCGGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVADRHG*APRWHR
Trigger: CCGATGCCACCGAGGGGCCCATCCGTGCCTATCTGC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGGGCAGCTTGGTCTTaGCGAGCTCCTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVGAAWS*RAPGWC
Trigger: GCACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGATTCCCGGGGCTGTGGTaGATGTACTGCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGFPGLW*MYCLMS
Trigger: TGACATCAAGCAGTACATCCACCACAGCCCCGGGAA...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTTGCCCAGCCCATCCCTaGGCAGGGTGTCTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETCPAHP*AGCLGA
Trigger: GGCTCCCAGACACCCTGCCCAGGGATGGGCTGGGCA...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGACGTTGGGAGCGGTCTaGAGGGGCAACCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVTLGAV*RGNLAS
Trigger: GGAGGCCAGGTTGCCCCTCCAGACCGCTCCCAACGT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGGCCTCAGGCAAGGGGTaGCCCCCAGATGAACCCACA +
Preference number: 4 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKEASGKG*PPDEPT
Trigger: TGTGGGTTCATCTGGGGGCCACCCCTTGCCTGAGGC...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGTTCTGCACTCCCAGCTaGCGAGGAATCGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGFCTPS*RGIGFG
Trigger: ACCAAAGCCGATTCCTCGCCAGCTGGGAGTGCAGAA...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGAAGCTGCGGGCGCAATaGCGCTTTGCAGACAAGACA +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGKLRAQ*RFADKT
Trigger: TGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTT...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCTTCCTGTTCAGCTCTaGGGTTCTAGGTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATLPVQL*GSRWSQ
Trigger: CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTCCCTCACACGCTGTGTaGTGGCTAAAGCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGAPSHAV*WLKLDQ
Trigger: TTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGG...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 72 bp TGGCAAGGCCATGTGGAGGGCACTGAATGGCCTTTGTaGTCCTTACTTCAGATTAGTCGAGGCTGGGATCTC +
Preference number: 4 (lower is better)
Translates to: WQGHVEGTEWPL*SLLQISRGWDL
Trigger: GAGATCCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCACATGGCCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTTAGCTTCATTCAAGTaGTTATCCAGCAAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLLASFK*LSSKVS
Trigger: CGAGACCTTGCTGGATAATCACTTGAATGAAGCTAA...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATTAGCTTCATTCAAGTaGTTATCCAGCAAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPLASFK*LSSKVS
Trigger: CGAGACCTTGCTGGATAATCACTTGAATGAAGCTAA...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCAGTGGCGGCATAAATaGCCAGGCCCCAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWQWRHK*PGPSSP
Trigger: TGGGCTGCTGGGGCCTGGTCATTTATGCCGCCACTG...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTCCAGCGTCGAGCAGGTaGGCAGGCGAGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETPASSR*AGEEGM
Trigger: CATGCCTTCCTCGCCTGCTCACCTGCTCGACGCTGG...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTCCATGTGGAGGGCACTaGATGGCCTTTGTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTPCGGH*MAFVVL
Trigger: AAGGACAACAAAGGCCATTCAGTGCCCTCCACATGG...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAGAAGTGCTGACAGCTTaGCGAGTCTACAAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGEVLTA*RVYKVC
Trigger: GCACACTTTGTAGACTCGTCAAGCTGTCAGCACTTC...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGACGATGCCAATGGGCTaGCGGTTGGGGACATCGCCG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVTMPMG*RLGTSP
Trigger: CGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGGAGGGCTCGATGTCGTaGAGGAACAGCAGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPEGSMS*RNSSSG
Trigger: GCCCGAGCTGCTGTTCCTGCACGACATCGAGCCCTC...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTTTGGTGTGCGGTCGCTaGCCAAGGACAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPLVCGR*PRTGLP
Trigger: GGGCAGCCCTGTCCTTGGGCAGCGACCGCACACCAA...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGGCCCGCTGGGAGCTCTaGTCTCAGGAATCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPARWEL*SQESPA
Trigger: TGCTGGGGATTCCTGAGAGCAGAGCTCCCAGCGGGC...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTTTTATCTGTGTGATGTaGGGGGCCTCCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTFICVM*GASLSP
Trigger: AGGAGACAGGGAGGCCCCGCACATCACACAGATAAA...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTTCGGGTCAGGCCACTaGCACCCCACATCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWFGSGH*HPTSAA
Trigger: AGCAGCGGATGTGGGGTGGCAGTGGCCTGACCCGAA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGACAGCCTGCCCGTCTaGCCTTCTTCTCGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVDSLPV*PSSRLP
Trigger: GGGAAGCCGAGAAGAAGGGCAGACGGGCAGGCTGTC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCAGTTTCGTTCCGAGATaGCTGGGGAGTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGLREGIYSLKAARGSSCSFVPR*LGSFSG
Trigger: GCCAGAGAAACTCCCCAGGCATCTCGGAACGAAACT...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGACCCAAGCAGGACGCTaGCGCTCCAGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWTQAGR*RSRKPA
Trigger: CGCTGGCTTTCTGGAGCGCCAGCGTCCTGCTTGGGT...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGCTTCGTGTCCACCCTaGTGTAGCCGCCGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPASCPP*CSRRGR
Trigger: ACGCCCTCGGCGGCTACACCAGGGTGGACACGAAGC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCCTGGGCAGGGTGTCTaGGAGCCACCCCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWPGQGV*EPPLQI
Trigger: GATTTGCAGGGGTGGCTCCCAGACACCCTGCCCAGG...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGGCGGGGTCACATGGCTaGGCGCAGACACACTCACAC +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWAGSHG*AQTHSH
Trigger: GTGTGAGTGTGTCTGCGCCCAGCCATGTGACCCCGC...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGGTCCTCAGCACTGGATaGCTGGCCAGCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWVLSTG*LASFPR
Trigger: CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGAC...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCAAGTCCTCCACACCTaGGGCATTCAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: SRYPTATRTQTHNLQSATQVLHT*GIQETL
Trigger: GAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTAGAAGCGGCGCGTGCTaGTGGGAGGCGGAGGGACAA +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPRSGAC*WEAEGQ
Trigger: TTGTCCCTCCGCCTCCCACCAGCACGCGCCGCTTCT...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGCTGTGGCACCAGGCTTaGAGGCAGGGAGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPLWHQA*RQGAGV
Trigger: GACACCAGCTCCCTGCCTCCAAGCCTGGTGCCACAG...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TTGTTGCTGCAGGGACGGCTTCCTGTTCAGCTCTGGGGTTCTAGGTGGTCACAGAATCTGCAACAGTATTaGTGTGACCAGAGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLQGRLPVQLWGSRWSQNLQQY*CDQSGF
Trigger: GAAACCGCTCTGGTCACACCAATACTGTTGCAGATT...CTGTGACCACCTAGAACCCCAGAGCTGAACAGGAAGCCGTCCCTGCAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCCCAGCAGCCCATCTTaGCCCCGGCGTTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPPSSPS*PRRCRL
Trigger: AAGCCTACAACGCCGGGGTCAAGATGGGCTGCTGGG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVTFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGACGTTTCCTTCCCCCTaGCGTTGGGAGCGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPTFPSP*RWERSG
Trigger: TCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGT...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CCGCAGCAGCAGTCCCTCACACGCTGTGTGGTGGCTAAAGCTGGACCAAAGTTAACGGACGGTTTCAAGTaGGTGCAATCTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: PQQQSLTRCVVAKAGPKLTDGFK*VQSGNN
Trigger: ATTATTTCCAGATTGCACTCACTTGAAACCGTCCGT...TAACTTTGGTCCAGCTTTAGCCACCACACAGCGTGTGAGGGACTGCTGCTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGTGTCCATCTTTTCTaGAGCCGGTTAATGTCTAGT +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAAGVHLF*SRLMSS
Trigger: ACTAGACATTAACCGGCTTCAGAAAAGATGGACACC...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTGAGGGCCATGTCCTaGTCCTCGCTGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWLRAMS*SSLSTT
Trigger: CGTGGTGGACAGCGAGGAGCAGGACATGGCCCTCAA...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGTCCGGCACGTGCAATaGCGAGTCGCTTTTGCTGCG +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWVRHVQ*RVAFAA
Trigger: CGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGAC...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTGCCGCTGCCGCTTCTaGATGTCGTACAGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWCRCRF*MSYRSL
Trigger: GAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTTGCCGGTGCTGCCGCTaGCGCTTCTGCATGTCGTAC +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETCRCCR*RFCMSY
Trigger: GTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCA...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTACAGACGTCAATACCTaGAGGCGTCTACAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTTDVNT*RRLQRG
Trigger: TCCTCTCTGTAGACGCCTGCAGGTATTGACGTCTGT...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR GCA 90 bp CAGGTTGGAGGATTCCAGCTAAGGCCCCTGCCTGAGAGTGAGAAAAACAACACTTTCAGTAGTCGGACTTaGCCTGTCCAAGCACGAGAT +
Preference number: 4 (lower is better)
Translates to: QVGGFQLRPLPESEKNNTFSSRT*PVQARD
Trigger: ATCTCGTGCTTGGACAGGGCAAGTCCGACTACTGAA...AGTGTTGTTTTTCTCACTCTCAGGCAGGGGCCTTAGCTGGAATCCTCCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGCTCTGCACACTGACCTaGACACTAAGAAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQLCTLT*TLRRAL
Trigger: CAAAGCCCTTCTTAGTGTGCAGGTCAGTGTGCAGAG...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGCTGGGCCCCCAACATaGTGTGTGCACGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPAGPPT*CVHGPC
Trigger: ACAAGGCCCGTGCACACAGCATGTTGGGGGCCCAGC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTACCCAAGCAGGACGCTaGCGCTCCAGAAAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPTQAGR*RSRKPA
Trigger: CGCTGGCTTTCTGGAGCGCCAGCGTCCTGCTTGGGT...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGAAGAGCACCTGGTTCTaGGTCCGGAACCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVKSTWF*VRNQLP
Trigger: GGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGAAGAGCACCTGGTTCTaGGTCCGGAACCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWKSTWF*VRNQLP
Trigger: GGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTT...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp ATTCCTGCACCTGGAAACTTCTGCCATGTGTTAAGGGGAAGCTCGTTAAAAGAGCGAGGGCGTCTTTTGTaGGGGAGCCACTTCCGTTTG +
Preference number: 4 (lower is better)
Translates to: IPAPGNFCHVLRGSSLKERGRLL*GSHFRL
Trigger: CAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCG...CTCTTTTAACGAGCTTCCCCTTAACACATGGCAGAAGTTTCCAGGTGCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGCATGGAGCTCGACGTaGCCGAGGGCTTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETAWSST*PRASCP
Trigger: TGGACACGAAGCCCTCGGCCACGTCGAGCTCCATGC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGTGCCAAACCCTCGCTTaGAGTTCCCGGGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPCQTLA*SSRGCG
Trigger: ACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCA...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCATTAGCTTCATTCAAGTaGTTATCCAGCAAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAALASFK*LSSKVS
Trigger: CGAGACCTTGCTGGATAATCACTTGAATGAAGCTAA...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTC +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWRHQPM*RDLTDV
Trigger: GACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCG...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAACGGACGGTTTCAAGTaGGTGCAATCTGGAAATAAT +
Preference number: 4 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAATDGFK*VQSGNN
Trigger: ATTATTTCCAGATTGCACTCACTTGAAACCGTCCGT...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGCACCAGGGAACGTCATaGTGCCAGTCTGCCGACAGA +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWHQGTS*CQSADR
Trigger: TCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTG...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGCTTCTCACAACGGTATaGGACATGCAGCAACACAGA +
Preference number: 4 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQLLTTV*DMQQHR
Trigger: TCTGTGTTGCTGCATGTCTCATACCGTTGTGAGAAG...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGGAACATTCCGCAGCTaGTGTCCTGTCTCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETGTFRS*CPVSGP
Trigger: CGGCCCTGAGACAGGACAGCAGCTGCGGAATGTTCC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTTCCAGGGCCAGCTCGTaGTCCGACTGTACCTCGTCT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPSRASS*SDCTSS
Trigger: AGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGA...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCTACTTGCCCGAGTTTTaGTTATTCGTTGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSYLPEF*LFVETR
Trigger: TCTGGTTTCAACGAATAAGCAAAACTCGGGCAAGTA...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTGGAGCCACTTCCGTTTaGGACTTTAGCTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSGATSV*DFSFIQ
Trigger: TTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCC...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTGGGCATCTTCAGCATaGAGAGCCACAGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWWASSA*RATAGA
Trigger: TGCGCCTGCTGTGGCTCTCCATGCTGAAGATGCCCA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGTTGATGTCATGGTACTaGCCCAGCAGGGCGTACGGG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVLMSWY*PSRAYG
Trigger: CCCGTACGCCCTGCTGGGCCAGTACCATGACATCAA...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVRTGLP*AQCVQL
Trigger: GAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPRTGLP*AQCVQL
Trigger: GAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCT...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGAGGACAGGGCTGCCCTaGGCACAATGTGTCCAACTC +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWRTGLP*AQCVQL
Trigger: GAGTTGGACACATTGTGCCCAGGGCAGCCCTGTCCT...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGGTGGACAGCAATATTTaGTGTTTTAACAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLVDSNI*CFNKPG
Trigger: ACCAGGTTTGTTAAAACACCAAATATTGCTGTCCAC...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGTGGACAGCAATATTTaGTGTTTTAACAAACCTGGT +
Preference number: 4 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPVDSNI*CFNKPG
Trigger: ACCAGGTTTGTTAAAACACCAAATATTGCTGTCCAC...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGCCACAAACATTCACCTaGCAAAGAAACAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSPQTFT*QRNRAE
Trigger: TTCTGCTCTGTTTCTTTGCCAGGTGAATGTTTGTGG...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGTCACCCACAGGCGCATaGGGATTCGGTCTATGGACC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVSPTGA*GFGLWT
Trigger: GGTCCATAGACCGAATCCCCATGCGCCTGTGGGTGA...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR TCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTCGCTTTTGCTGCGCATaGTGTCCACGTCCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETRFCCA*CPRPGS
Trigger: ACTACCCGGACGTGGACATCATGCGCAGCAAAAGCG...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCGCTTTTGCTGCGCATaGTGTCCACGTCCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPRFCCA*CPRPGS
Trigger: ACTACCCGGACGTGGACATCATGCGCAGCAAAAGCG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGCTCCTTGGCCTCCTCTaGCACGTTGGGATAGATCAC +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVLLGLL*HVGIDH
Trigger: GTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAG...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTTCCAGAAAATGTTCTTaGAGTCTTGAAAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QATATPHPLLSCLQLFYSSRKCS*SLESQP
Trigger: GGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGA...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTTGCGCCTCGAGATCCTaGCAAGTACAGCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETCASRS*QVQPGL
Trigger: GAGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCA...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTCATGATGCCAGTCTaGCGACAGACCCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVVMMPV*RQTQER
Trigger: CCTTTCCTGGGTCTGTCGGCAGACTGGCATCATGAC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGCACCTGTCTTCACTaGCAGGCACCTGTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVGTCLH*QAPVFT
Trigger: AGTGAAGACAGGTGCCTGCCAGTGAAGACAGGTGCC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CCA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGAGGAATCCCCAGCAAATaGTTTAGAGACGAATCAAAG +
Preference number: 4 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGGIPSK*FRDESK
Trigger: CTTTGATTCGTCTCTAAACCATTTGCTGGGGATTCC...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
3UTR CAA 72 bp CAAGTTTCCACACATCCAGAAAATGTTCTTGAAGTCTaGAAAGTCAGCCCTCTGCGATCCTGGGACACCGTG +
Preference number: 4 (lower is better)
Translates to: QVSTHPENVLEV*KVSPLRSWDTV
Trigger: CACGGTGTCCCAGGATCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATTTTCTGGATGTGTGGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGCACGTAGATCACCCTaGCGCTCAGGTCGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETARRSP*RSGRSC
Trigger: ACAACTACGACCTGAGCGTCAGGGTGATCTACGTGC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGCCGTTAAGGAAAAGTaGAACGCCAAAGAGGACGCC +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWAVKEK*NAKEDA
Trigger: GGCGTCCTCTTTGGCGTTGCACTTTTCCTTAACGGC...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGCCCCGCCTTGTTACTaGATCCGTCTGAGGTACAAG +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPAPPCY*IRLRYK
Trigger: CTTGTACCTCAGACGGATGCAGTAACAAGGCGGGGC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGACAGACGTCAATACCTaGAGGCGTCACGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPTDVNT*RRHGLC
Trigger: ACAGAGTCCGTGACGCCTGCAGGTATTGACGTCTGT...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTAGACGTTGGGAAACATaGCCATCACGGCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETRRWET*PSRLCR
Trigger: TCGGCACAGCCGTGATGGCCATGTTTCCCAACGTCT...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTTACTGCTTGATGTCATaGTACTGGCCCAGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPYCLMS*YWPSRA
Trigger: CGCCCTGCTGGGCCAGTACCATGACATCAAGCAGTA...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGCAAAACCACCACAAATaGGACCAACATTATCCTAGT +
Preference number: 4 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGQNHHK*DQHYPS
Trigger: ACTAGGATAATGTTGGTCTCATTTGTGGTGGTTTTG...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGGATGGCACAATCTATaGCAAACCCTCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVGWHNL*QTLAWS
Trigger: ACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCC...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTTTTATCTGTGTGATGTaGGGGGCCTCCCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETFICVM*GASLSP
Trigger: AGGAGACAGGGAGGCCCCGCACATCACACAGATAAA...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGTGCGAGATGTACACTTaGCAGGACAGGATGGCACAA +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWCEMYT*QDRMAQ
Trigger: TTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCA...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGAAACACCTGAAGTGCTaGCAGCTTGACGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPKHLKC*QLDEST
Trigger: TGTAGACTCGTCAAGCTGTCAGCACTTCAGGTGTTT...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCCTCCTCTGACACGTTaGGATAGATCACCAGGAATG +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPPPLTR*DRSPGM
Trigger: CATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTCGCATTCCTGCACCTaGAAACTTCTGCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWSHSCT*KLLPCV
Trigger: AACACATGGCAGAAGTTTCCAGGTGCAGGAATGCGA...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGAACCCACATTTGGTGTaGTTTGGGTCGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWNPHLV*FGSDLD
Trigger: ATCAAGATCCGACCCAAACCACACCAAATGTGGGTT...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp CTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGAGAAGCGAAACAGCGTaGGAAAAGGTGTCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LSKPTPTVSNRLSSKETVRSETA*EKVSIF
Trigger: AAAGATGGACACCTTTTCCCACGCTGTTTCGCTTCT...CACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTAAGACTCCATTGATTTaGCCTCAGTGGACTCACAAG +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPKTPLI*PQWTHK
Trigger: CTTGTGAGTCCACTGAGGTCAAATCAATGGAGTCTT...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR TCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGGTGTCCATCTTTTCTaGAGCCGGTTAATGTCTAGT +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPGVHLF*SRLMSS
Trigger: ACTAGACATTAACCGGCTTCAGAAAAGATGGACACC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CCA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGGAGCCACTTCCGTTTaGGACTTTAGCTTCATTCAA +
Preference number: 4 (lower is better)
Translates to: KWFRDESKCSESQRFLPPGATSV*DFSFIQ
Trigger: TTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGAGAGACGAATCAAAGTaGAGTGAAAGTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWRDESK*SESQRF
Trigger: GAAACGTTGACTTTCACTGCACTTTGATTCGTCTCT...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR GCA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTAGAGACGAATCAAAGTaGAGTGAAAGTCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETRDESK*SESQRF
Trigger: GAAACGTTGACTTTCACTGCACTTTGATTCGTCTCT...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp CCTGCCTGCGGAACGCGTGCCGCCGCCGCCGCATGGAGCTCGACGTaGCCGAGGGCTTCGTGTCCACCCTGGTGTAGCCGCCGAGGGCGT +
Preference number: 5 (lower is better)
Translates to: PACGTRAAAAAWSST*PRASCPPWCSRRGR
Trigger: ACGCCCTCGGCGGCTACACCAGGGTGGACACGAAGCCCTCGGCCACGTCGAGCTCCATGCGGCGGCGGCGGCACGCGTTCCGCAGGCAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp AGCTCGTGCTCCGACTGTACCTCGTCTGGGAAGGCAGGGACGCCGTaGGGCTCGCCCCCATCCAGGGCGCCGGGCTCCTCAGCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: SSCSDCTSSGKAGTP*GSPPSRAPGSSALR
Trigger: GCGCAGCGCTGAGGAGCCCGGCGCCCTGGATGGGGGCGAGCCGCACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCGGAGCACGAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp GTCCGGGTAGTCCAGGGCCAGCTCGTGCTCCGACTGTACCTCGTCTaGGAAGGCAGGGACGCCGTGCGGCTCGCCCCCATCCAGGGCGCC +
Preference number: 5 (lower is better)
Translates to: VRVVQGQLVLRLYLV*EGRDAVRLAPIQGA
Trigger: GGCGCCCTGGATGGGGGCGAGCCGCACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGACTACCCGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp GGCTCGCCCCCATCCAGGGCGCCGGGCTCCTCAGCGCTGCGCTCCTaGTGCGGGCTGTACTGCTCCTCGTCGATGCTGAACAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GSPPSRAPGSSALRS*CGLYCSSSMLNRCR
Trigger: CCTGCACCTGTTCAGCATCGACGAGGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCGGCGCCCTGGATGGGGGCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS GCA 90 bp CTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTGCCGGTGCTGCCGCTaGCGCTTCTGCATGTCGTACAGGTCGCTCATGCTGCGCGACGGC +
Preference number: 5 (lower is better)
Translates to: LEVVAPLWFRCRCCR*RFCMSYRSLMLRDG
Trigger: GCCGTCGCGCAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp TCCCCGCTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTGCCGGTGCTaGCGCTGCCGCTTCTGCATGTCGTACAGGTCGCTCATGCTGCGC +
Preference number: 5 (lower is better)
Translates to: SPLEVVAPLWFRCRC*RCRFCMSYRSLMLR
Trigger: GCGCAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp CTCTCGGTGTCCCCGCTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTaGCGGTGCTGCCGCTGCCGCTTCTGCATGTCGTACAGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: LSVSPLEVVAPLWFR*RCCRCRFCMSYRSL
Trigger: GAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp CCGCCCGCCCGCCCACCCGCCCACTGGAATGTGTGTAAACGGGAGTaGGGCTCAGACCACGGACTCTGTCTCCACCGGTCCCTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: PPARPPAHWNVCKRE*GSDHGLCLHRSLQA
Trigger: GGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGGTCTGAGCCGCACTCCCGTTTACACACATTCCAGTGGGCGGGTGGGCGGGCGGGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS CCA 90 bp CCCTCCTCACTCTCGGTGTCCCCGCTGGAGGTGGTGGCCCCGCTCTaGTTCCGGTGCCGGTGCTGCCGCTGCCGCTTCTGCATGTCGTAC +
Preference number: 5 (lower is better)
Translates to: PSSLSVSPLEVVAPL*FRCRCCRCRFCMSY
Trigger: GTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACACCGAGAGTGAGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACTCCTTCCCCCTGACGTaGGGAGCGGTCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RTAEPCAGQRGADSSACHSFPLT*GAVWRG
Trigger: GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGA...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp GTGTCCCCGCTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTGCCGGTaGTGCCGCTGCCGCTTCTGCATGTCGTACAGGTCGCTCATGCTG +
Preference number: 5 (lower is better)
Translates to: VSPLEVVAPLWFRCR*CRCRFCMSYRSLML
Trigger: CAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGGCCAGGCGGGGCAGCTaGGTCTTGGCGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRARRGS*VLASSW
Trigger: CCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGGC...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACGGCGAGGAATCGGCTTaGGTGAGCCCTGGATCCGGC +
Preference number: 5 (lower is better)
Translates to: RTAEPCAGQRGADSSACHGEESA*VSPGSG
Trigger: GCCGGATCCAGGGCTCACCAAAGCCGATTCCTCGCC...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GGGGTTGAGGCCAAAGATGTCGTGACCTGGTCCCCGCTGTGGCCAGGCCGGGCCCAGAGCACCTCCCCTTaGACACTGACCGGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: GVEAKDVVTWSPLWPGRAQSTSP*TLTGVP
Trigger: GGGGACGCCGGTCAGTGTCAAAGGGGAGGTGCTCTG...GGCCCGGCCTGGCCACAGCGGGGACCAGGTCACGACATCTTTGGCCTCAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp GGAAAAGTGCAACGCCAAAGAGGACGCCAACGCAGAGGGCGAGGATaGAGGGCCGCCGGCGGCCCCAGCTCAGGGTGCACCGGTCACTCG +
Preference number: 5 (lower is better)
Translates to: GKVQRQRGRQRRGRG*RAAGGPSSGCTGHS
Trigger: CGAGTGACCGGTGCACCCTGAGCTGGGGCCGCCGGCGGCCCTTCATCCTCGCCCTCTGCGTTGGCGTCCTCTTTGGCGTTGCACTTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS TCA 90 bp GCAGGCGTTCTGTCTCCACCGGTCCCTGCAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCTTTTCGCTGTTCCCACCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: AGVLSPPVPAGPPSA*ASARWAFRCSHRPC
Trigger: GCAGGGCCGGTGGGAACAGCGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAACGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS TCA 90 bp CCACGGACTCTGTCTCCACCGGTCCCTGCAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCTTTTCGCTGTTCCCACCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PRTLSPPVPAGPPSA*ASARWAFRCSHRPC
Trigger: GCAGGGCCGGTGGGAACAGCGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS GCA 90 bp TCCAGGACCACCACTCCCAGCACCGTGAGCACGATGCCAATGGGCTaGCGGTTGGGGACATCGCCGAGGGCCAGACCGATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SRTTTPSTVSTMPMG*RLGTSPRARPMAEP
Trigger: CGGCTCTGCCATCGGTCTGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGTGCTCACGGTGCTGGGAGTGGTGGTCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS GCA 90 bp GTGGCCCCGCTCTGGTTCCGGTGCCGGTGCTGCCGCTGCCGCTTCTaGATGTCGTACAGGTCGCTCATGCTGCGCGACGGCTTGATCAGC +
Preference number: 5 (lower is better)
Translates to: VAPLWFRCRCCRCRF*MSYRSLMLRDGLIS
Trigger: GCTGATCAAGCCGTCGCGCAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp GGTGGCAGAGGCACAGCCGCATCAGCTCCCTGGGCATCTTCAGCATaGAGAGCCACAGCAGGCGCACCGTGGTCTCGCCCTCCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GGRGTAASAPWASSA*RATAGAPWSRPPPP
Trigger: AGGAGGGGGAGGGCGAGACCACGGTGCGCCTGCTGTGGCTCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGCTGTGCCTCTGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp TCACGGACTCTGTCTCCACCGGTCCCTGCAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCTTTTCGCTGTTCCCACCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SRTLSPPVPAGPPSA*ASARWAFRCSHRPC
Trigger: GCAGGGCCGGTGGGAACAGCGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CCA 90 bp CCAGCTTGTGGGCACCTGTCTTCACTGGCAGGCACCTGTCTTCACTaGCCAGCTCCTCGGGCAGGCACTCCCCGCAGCTGGAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PACGHLSSLAGTCLH*PAPRAGTPRSWSMG
Trigger: GCCCATGCTCCAGCTGCGGGGAGTGCCTGCCCGAGGAGCTGGCCAGTGAAGACAGGTGCCTGCCAGTGAAGACAGGTGCCCACAAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS CCA 90 bp CTCTTCAACAAGGAGGGGCGCCTCAACAGCCTGGCTAGAGGCCCCTaGCCAGACCCAAGCAGGACGCTGGCGCTCCAGAAAGCCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LFNKEGRLNSLARGP*PDPSRTLALQKASG
Trigger: CCCGCTGGCTTTCTGGAGCGCCAGCGTCCTGCTTGGGTCTGGCCAGGGGCCTCTAGCCAGGCTGTTGAGGCGCCCCTCCTTGTTGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp CGGCCCCTGGGCCTTCAGATGAGGGTGGGAAGCCTCAGGCAAGGGGTGGCCCCCAAGGTCTCGTCCTCCTaGGCGGCTTCCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RPLGLQMRVGSLRQGVAPKVSSS*AASLRK
Trigger: CTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTT...GGGGGCCACCCCTTGCCTGAGGCTTCCCACCCTCATCTGAAGGCCCAGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCCTCTGCGATCCTGGGACACCGTGGCCTGGCAGACACACCGTGCGTGAGCAGGATGCCAAACCCTCGCTaGGAGTTCCCGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: PSAILGHRGLADTPCVSRMPNPR*EFPGLW
Trigger: CCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCAT...CCTGCTCACGCACGGTGTGTCTGCCAGGCCACGGTGTCCCAGGATCGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGACACCCGAGGTAGCCTaGCGGCGGGACTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWTPEVA*RRDLGG
Trigger: GCCTCCCAAGTCCCGCCGCAAGGCTACCTCGGGTGT...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACCCCCCCTTCCAGCCCTCTaGTTGCTGCAGGGACGGCTT +
Preference number: 5 (lower is better)
Translates to: QHACPLRKRGRPSHIHTPPLPAL*LLQGRL
Trigger: AAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGG...GGGTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp GCGCGGTGTCCGGCACGTGCAATGCCGAGTCGCTTTTGCTGCGCATaGTGTCCACGTCCGGGTAGTCCAGGGCCAGCTCGTGCTCCGACT +
Preference number: 5 (lower is better)
Translates to: ARCPARAMPSRFCCA*CPRPGSPGPARAPT
Trigger: AGTCGGAGCACGAGCTGGCCCTGGACTACCCGGACGTGGACATCATGCGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGACACCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp CAGCAGCTCGGGCTCCAGGTCCAGCGCGGTGTCCGGCACGTGCAATaGCGAGTCGCTTTTGCTGCGCATGATGTCCACGTCCGGGTAGTC +
Preference number: 5 (lower is better)
Translates to: QQLGLQVQRGVRHVQ*RVAFAAHDVHVRVV
Trigger: GACTACCCGGACGTGGACATCATGCGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGACACCGCGCTGGACCTGGAGCCCGAGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp AACGGGAGTGCGGCTCAGACCACGGACTCTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTGAGCTTCAGCACGGTGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: NGSAAQTTDSVSTGP*RPSFRVSFSTVGFS
Trigger: CGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGGTCTGAGCCGCACTCCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS CCA 90 bp GGCCACTGTTTCTCCTCTTCAACAAGGAGGGGCGCCTCAACAGCCTaGCTAGAGGCCCCTGGCCAGACCCAAGCAGGACGCTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GHCFSSSTRRGASTA*LEAPGQTQAGRWRS
Trigger: GGAGCGCCAGCGTCCTGCTTGGGTCTGGCCAGGGGCCTCTAGCCAGGCTGTTGAGGCGCCCCTCCTTGTTGAAGAGGAGAAACAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGAGTTCGAGGGGGCCTaGGGGTCGCCTTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHEFEGA*GSPSKM
Trigger: CATCTTCGAAGGCGACCCCAAGGCCCCCTCGAACTC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGCCCGGCGTTGTAGGCTaGCCAGGCGGTCGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLPGVVG*PGGRVR
Trigger: TCGAACTCGACCGCCTGGCAAGCCTACAACGCCGGG...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGAGCCTCCTCCCAGCTTaGGTGTGCGGTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLSLLPA*VCGRCP
Trigger: TGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGCT...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCAAGCCTCCTCCCAGCTTaGGTGTGCGGTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: AQDRGARTAAHATNIHLASLLPA*VCGRCP
Trigger: TGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGCT...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACCCTACGACTACTGAATaGTGGCTATGGGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: RTAEPCAGQRGADSSACHPTTTE*WLWGRR
Trigger: CCTCCGCCCCCATAGCCACAATTCAGTAGTCGTAGG...GTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS CCA 90 bp TCTCAGGGCCGACCCTGTGTCCAGCTTGTGGGCACCTGTCTTCACTaGCAGGCACCTGTCTTCACTGGCCAGCTCCTCGGGCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: SQGRPCVQLVGTCLH*QAPVFTGQLLGQAL
Trigger: GAGTGCCTGCCCGAGGAGCTGGCCAGTGAAGACAGGTGCCTGCCAGTGAAGACAGGTGCCCACAAGCTGGACACAGGGTCGGCCCTGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTCCAATGGGCTGCCGGTaGGGGACATCGCCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPPMGCR*GTSPRA
Trigger: GGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGG...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCCGGGGCAGCTTGGTCTaGGCGAGCTCCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VETRTTVRSPPVTRALAVRGSLV*ASSWLV
Trigger: CACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCCG...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGAGTTCGAGGGGGCCTaGGGGTCGCCTTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWEFEGA*GSPSKM
Trigger: CATCTTCGAAGGCGACCCCAAGGCCCCCTCGAACTC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCCCCGGCGTTGTAGGCTaGCCAGGCGGTCGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGPGVVG*PGGRVR
Trigger: TCGAACTCGACCGCCTGGCAAGCCTACAACGCCGGG...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GCCACGAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 5 (lower is better)
Translates to: ATSPTPAASSALDGWPASDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...GGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTCGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGGGCGCAATGGCGCTTaGCAGACAAGACAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWGRNGA*QTRQPA
Trigger: GGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGGCCAAGGGGCCACCTaGAGCTCTGGCCGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSSATRERHDASLPTDPGGQGAT*SSGRRV
Trigger: CACCCTCCGGCCAGAGCTCAAGGTGGCCCCTTGGCC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp GCTGGGCTTGCTTTCCCCATAGATGATGCTGTCCCTGCCGCCCTGTaGCAGGCACCTCCCAGCAACTCCCAGGGGGCCACTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AGLAFPIDDAVPAAL*QAPPSNSQGATVSP
Trigger: AGGAGAAACAGTGGCCCCCTGGGAGTTGCTGGGAGGTGCCTGGCACAGGGCGGCAGGGACAGCATCATCTATGGGGAAAGCAAGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS GCA 90 bp ACGTCAATACCTGCAGGCGTCACGGACTCTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTGAGCTTCAGCACGGTGGGCTTTTCG +
Preference number: 5 (lower is better)
Translates to: TSIPAGVTDSVSTGP*RPSFRVSFSTVGFS
Trigger: CGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGACGCCTGCAGGTATTGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CAA 90 bp TCCAGCACGCATGTCCCCTTCGCAAGCGGGGGAGGCCCTCGCACATCCACACACGACCCTGTGTCCAGCTaGTGGGCACCTGTCTTCACT +
Preference number: 5 (lower is better)
Translates to: SSTHVPFASGGGPRTSTHDPVSS*WAPVFT
Trigger: AGTGAAGACAGGTGCCCACAAGCTGGACACAGGGTC...GTGTGTGGATGTGCGAGGGCCTCCCCCGCTTGCGAAGGGGACATGCGTGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGAGAAGGCGTGGATGTaGAGGGCCATGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWEKAWM*RAMSCS
Trigger: GGAGCAGGACATGGCCCTCAACATCCACGCCTTCTC...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCCCGTCTGCCGAGAAGGCGTGGATGTaGAGGGCCATGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HKLRAQWRFADKTACPSAEKAWM*RAMSCS
Trigger: GGAGCAGGACATGGCCCTCAACATCCACGCCTTCTC...GGCAGACGGGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGTCCTTGGCGGCTTCCTaGAGGAAGGTGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVSLAAS*RKVARR
Trigger: CCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGA...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CTGCCTCCCAGGAAGGCAGCTCCAGAAACCGACTCTACTGACCCTGGACCCCAGATGCTGCGCGACGGCTaGATCAGCACCACGGCGTTG +
Preference number: 5 (lower is better)
Translates to: LPPRKAAPETDSTDPGPQMLRDG*ISTTAL
Trigger: CAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCAT...CTGGGGTCCAGGGTCAGTAGAGTCGGTTTCTGGAGCTGCCTTCCTGGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTACACCCGAGGTAGCCTaGCGGCGGGACTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPTPEVA*RRDLGG
Trigger: GCCTCCCAAGTCCCGCCGCAAGGCTACCTCGGGTGT...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCGGGCGCAATGGCGCTTaGCAGACAAGACAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: PDPHKLRAQWRFADKTACGRNGA*QTRQPA
Trigger: GGCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCC...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp CCCACGGCGTCGACCACGCCCCCAAGGGCAGAGGCCACCAGGATCTaGGAGATGTACACTTGGCAGGACAGGATGGCACAATCTATGCCA +
Preference number: 5 (lower is better)
Translates to: PTASTTPPRAEATRI*EMYTWQDRMAQSMP
Trigger: TGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTCTGCCCTTGGGGGCGTGGTCGACGCCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGCGCCGAGGGCGTCTTTaGTGGGGGAGCCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: KVNVSFPLTLGAVWRGNLRRGRL*WGSHFR
Trigger: ACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGCG...CAGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCATGCTGCGCGACGGCTaGATCAGCACCACGGCGTTG +
Preference number: 5 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGMLRDG*ISTTAL
Trigger: CAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCAT...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCTGGAAACTTCTGCCATGTGGAGTTCGAGGGGGCCTaGGGGTCGCCTTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: LCPFPPARIPAPGNFCHVEFEGA*GSPSKM
Trigger: CATCTTCGAAGGCGACCCCAAGGCCCCCTCGAACTC...CACATGGCAGAAGTTTCCAGGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GAGCCCAACTCCAGCTGCGTCCTCAGCACTGGATGGCTGGCCAGCTTCCCCAGGCTGTGTGCACGGGCCTaGTTCAACTCGGAACTGAAC +
Preference number: 5 (lower is better)
Translates to: EPNSSCVLSTGWLASFPRLCARA*FNSELN
Trigger: GTTCAGTTCCGAGTTGAACAAGGCCCGTGCACACAG...CCTGGGGAAGCTGGCCAGCCATCCAGTGCTGAGGACGCAGCTGGAGTTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp CGCTCCTGCTGCGGGCTGTACTGCTCCTCGTCGATGCTGAACAGGTaGAGGGCCACGGACACCGTGAAGATGATGGCGGCAAAGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RSCCGLYCSSSMLNR*RATDTVKMMAAKKK
Trigger: CTTCTTCTTTGCCGCCATCATCTTCACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGCAGTACAGCCCGCAGCAGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 90 bp GCCACGGACACCGTGAAGATGATGGCGGCAAAGAAGAAGAGCACCTaGTTCTGGGTCCGGAACCAGCTGCCCAGGAAGGTCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ATDTVKMMAAKKKST*FWVRNQLPRKVWVQ
Trigger: CTGGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTTTGCCGCCATCATCTTCACGGTGTCCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 90 bp TGCCTTCGCCGGCCAACGGGGAAGACAGGCCTTTCTGCTCCTCCTTaGCCTCCTCTGACACGTTGGGATAGATCACCAGGAATGTGGCCG +
Preference number: 5 (lower is better)
Translates to: CLRRPTGKTGLSAPP*PPLTRWDRSPGMWP
Trigger: CGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAGGCCTGTCTTCCCCGTTGGCCGGCGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCGACTCACAAGGGTCTTaGGACGGGACAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VETRTTVRSPPVTRALAVDSQGS*DGTALR
Trigger: CCTCAGGGCTGTCCCGTCCAAAGACCCTTGTGAGTC...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCGAGAAGGCGTGGATGTaGAGGGCCATGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGEKAWM*RAMSCS
Trigger: GGAGCAGGACATGGCCCTCAACATCCACGCCTTCTC...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGCGGGGCAGCTTGGTCTaGGCGAGCTCCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSRGSLV*ASSWLV
Trigger: CACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCCG...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCGCCGAGGGCGTCTTTaGTGGGGGAGCCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSRRGRL*WGSHFR
Trigger: ACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGCG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GCGCAGGACAGAGGGGCGCGGACAGCAGCGCATGCCACAAACATTCACCTGGCACTGCGAGATGTACACTaGGCAGGACAGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: AQDRGARTAAHATNIHLALRDVH*AGQDGT
Trigger: TGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAG...TGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCCCTCTGTCCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp TCAAGTGATTATCCAGCAAGGTCTCGTCCTCCTTGGCGGCTTCCTTaGGGAAGGTGGCCAGGCGGGGCAGCTTGGTCTTGGCGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SSDYPARSRPPWRLP*GRWPGGAAWSWRAP
Trigger: AGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTTGCTGGATAATCACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp GGCCAACGGGGAAGACAGGCCTTTCTGCTCCTCCTTGGCCTCCTCTaGCACGTTGGGATAGATCACCAGGAATGTGGCCGTCAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GQRGRQAFLLLLGLL*HVGIDHQECGRQEA
Trigger: GGCTTCCTGACGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAGGCCTGTCTTCCCCGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp GCGCCTCCGGCTTTCTGCGGGTCCGGCAGGGGCACGGATAACTCTTaGACTTGCATAGATTCCGGGTCGGCATTCTGCGGAGCCATTTTC +
Preference number: 5 (lower is better)
Translates to: APPAFCGSGRGTDNS*TCIDSGSAFCGAIF
Trigger: GAAAATGGCTCCGCAGAATGCCGACCCGGAATCTATGCAAGTTCAAGAGTTATCCGTGCCCCTGCCGGACCCGCAGAAAGCCGGAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS CCA 90 bp GACACCGTGAAGATGATGGCGGCAAAGAAGAAGAGCACCTGGTTCTaGGTCCGGAACCAGCTGCCCAGGAAGGTCTGGGTCCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DTVKMMAAKKKSTWF*VRNQLPRKVWVQSS
Trigger: GCTGGACTGGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTTTGCCGCCATCATCTTCACGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 90 bp CCTCCTTGGCCTCCTCTGACACGTTGGGATAGATCACCAGGAATGTaGCCGTCAGGAAGCCCAGGAAAGAGCCCACAGAGGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: PPWPPLTRWDRSPGM*PSGSPGKSPQRPPW
Trigger: CCATGGTGGCCTCTGTGGGCTCTTTCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CTGTTTTATAGTCGTCAGGACGAGAAGCCGGAGAAACCAGCTAAGACGGGAGCTCCAATGGGCTGCCGGTaGGGGACATCGCCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LFYSRQDEKPEKPAKTGAPMGCR*GTSPRA
Trigger: GGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGG...AGCTCCCGTCTTAGCTGGTTTCTCCGGCTTCTCGTCCTGACGACTATAAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCATCCTTGGCGGCTTCCTaGAGGAAGGTGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TQLPPGHKHTIYKVPPAASLAAS*RKVARR
Trigger: CCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGA...TGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GCAGTGAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAAGGTCTCGTCCTCCTaGGCGGCTTCCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: AVKVNVSFPLTLGAVWRGKVSSS*AASLRK
Trigger: CTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTT...GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACATGGTGGATGTACTGCTaGATGTCATGGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: PRRVLQTGRAGSHGWAQTWWMYC*MSWYWP
Trigger: GGGCCAGTACCATGACATCAAGCAGTACATCCACCA...TGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGGGCCAAGGGGCCACCTaGAGCTCTGGCCGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGGQGAT*SSGRRV
Trigger: CACCCTCCGGCCAGAGCTCAAGGTGGCCCCTTGGCC...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp ACGCCCCCAAGGGCAGAGGCCACCAGGATCTGCGAGATGTACACTTaGCAGGACAGGATGGCACAATCTATGCCAAACCCTCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TPPRAEATRICEMYT*QDRMAQSMPNPRLE
Trigger: CTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTCTGCCCTTGGGGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGCCGAGGGCGTCTTTaGTGGGGGAGCCACTTCCGT +
Preference number: 5 (lower is better)
Translates to: QATATPHPLLSCLQLFYSRRGRL*WGSHFR
Trigger: ACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGCG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTGACCCACACAAGCTGCGGGCGCAATGGCGCTTTGCAGACAAGACAGCCTGCTGGTGGATGTACTGCTaGATGTCATGGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: PDPHKLRAQWRFADKTACWWMYC*MSWYWP
Trigger: GGGCCAGTACCATGACATCAAGCAGTACATCCACCA...GCAGGCTGTCTTGTCTGCAAAGCGCCATTGCGCCCGCAGCTTGTGTGGGTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGAATGCCAAACCCTCGCTaGGAGTTCCCGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: TATRTQTHNLQSATSGRRMPNPR*EFPGLW
Trigger: CCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCAT...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCTCCTTCCCCCTGACGTaGGGAGCGGTCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PGLREGIYSLKAARGSSCSFPLT*GAVWRG
Trigger: GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGA...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTGGTTTGGGTCGGATCTaGATTCGGGTCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPGLGRI*IRVRPL
Trigger: CAGTGGCCTGACCCGAATCAAGATCCGACCCAAACC...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AGCTCTTCAGCCACCAGGGAACGTCATGATGCCAGTCTGCCGACAGACCCAGGAGGTTTGGGTCGGATCTaGATTCGGGTCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SSSATRERHDASLPTDPGGLGRI*IRVRPL
Trigger: CAGTGGCCTGACCCGAATCAAGATCCGACCCAAACC...TCCTGGGTCTGTCGGCAGACTGGCATCATGACGTTCCCTGGTGGCTGAAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGACACACCAGATGAACCCACATTaGGTGTGGTTTGGGTCGGAT +
Preference number: 5 (lower is better)
Translates to: RRVLQTGRAGSHGWAQTHQMNPH*VWFGSD
Trigger: ATCCGACCCAAACCACACCAAATGTGGGTTCATCTG...GTGTGTCTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GACCAAGTCCTCCACACCTGGGGCATTCAAGAAACACTCCTGATGGCTGTTGGACAGAGCACCTCCCCTTaGACACTGACCGGCGTCCCC +
Preference number: 5 (lower is better)
Translates to: DQVLHTWGIQETLLMAVGQSTSP*TLTGVP
Trigger: GGGGACGCCGGTCAGTGTCAAAGGGGAGGTGCTCTG...TCCAACAGCCATCAGGAGTGTTTCTTGAATGCCCCAGGTGTGGAGGACTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGACCCCTTCCAGCCCTCTaGTTGCTGCAGGGACGGCTT +
Preference number: 5 (lower is better)
Translates to: TATRTQTHNLQSATSGRRPLPAL*LLQGRL
Trigger: AAGCCGTCCCTGCAGCAACAAGAGGGCTGGAAGGGG...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp CTGTGCCGACAGAGAAGCCCAGCGTCCCCAGCACGTAGATCACCCTaGCGCTCAGGTCGTAGTTGTCCAAGTACTTCTGTAACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LCRQRSPASPARRSP*RSGRSCPSTSVTGL
Trigger: CAGCCCTGTTACAGAAGTACTTGGACAACTACGACCTGAGCGTCAGGGTGATCTACGTGCTGGGGACGCTGGGCTTCTCTGTCGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp GGGAAGACAGGCCTTTCTGCTCCTCCTTGGCCTCCTCTGACACGTTaGGATAGATCACCAGGAATGTGGCCGTCAGGAAGCCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: GKTGLSAPPWPPLTR*DRSPGMWPSGSPGK
Trigger: CTTTCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGGCCAAGGAGGAGCAGAAAGGCCTGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GAAAGTCAACGTTTCCTTCCCCCTGACGTTGGGAGCGGTCTGGAGGGGCAACCTAATGCCGAGTCGCTTTaGCTGCGCATGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: ESQRFLPPDVGSGLEGQPNAESL*LRMMST
Trigger: CGTGGACATCATGCGCAGCAAAAGCGACTCGGCATT...AGGTTGCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGAAACGTTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CACAATCTACAAAGTGCCACCAGCGGCAGGAGACACGGCAAGACCAGAGGCCCAAATGCCGAGTCGCTTTaGCTGCGCATGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: HNLQSATSGRRHGKTRGPNAESL*LRMMST
Trigger: CGTGGACATCATGCGCAGCAAAAGCGACTCGGCATT...TGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTGGTGGCACTTTGTAGATTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GACGAGTCTACAAAGTGTGCAGCCACCGACTCCTGTCACCGAGGAGCACACAACAAGGTCTCGTCCTCCTaGGCGGCTTCCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DESTKCAATDSCHRGAHNKVSSS*AASLRK
Trigger: CTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTT...GTTGTGTGCTCCTCGGTGACAGGAGTCGGTGGCTGCACACTTTGTAGACTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTTGAAACCAGAACGACTGTGCGGAGCCCTCCGGTGACACGGGCCTTAGCTGTCTGGTGGATGTACTGCTaGATGTCATGGTACTGGCCC +
Preference number: 5 (lower is better)
Translates to: VETRTTVRSPPVTRALAVWWMYC*MSWYWP
Trigger: GGGCCAGTACCATGACATCAAGCAGTACATCCACCA...GACAGCTAAGGCCCGTGTCACCGGAGGGCTCCGCACAGTCGTTCTGGTTTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGAATGTTCTTGAAGTCTaGAAAGTCAGCCCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQNVLEV*KVSPLR
Trigger: TCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATT...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp TGGAGGGCACTGAATGGCCTTTGTTGTCCTTACTTCAGATTAGTCGAGGCTGGGGGCGAGGAATCGGCTTaGGTGAGCCCTGGATCCGGC +
Preference number: 5 (lower is better)
Translates to: WRALNGLCCPYFRLVEAGGEESA*VSPGSG
Trigger: GCCGGATCCAGGGCTCACCAAAGCCGATTCCTCGCC...CCCAGCCTCGACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGGGCACTGAATGGCCTTaGTTGTCCTTACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQGTEWP*LSLLQI
Trigger: AATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCC...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCAGCGGCAGGAGAGACCCTGTGTCCAGCTaGTGGGCACCTGTCTTCACT +
Preference number: 5 (lower is better)
Translates to: TATRTQTHNLQSATSGRRDPVSS*WAPVFT
Trigger: AGTGAAGACAGGTGCCCACAAGCTGGACACAGGGTC...TCTCCTGCCGCTGGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCGGTGACACGGGCCTTAGCTGTCCCAGACGTCTGCGTCCCTTTGCACCTGGAAGACTCCATTGATTaGACCTCAGTGGACTCACAA +
Preference number: 5 (lower is better)
Translates to: PPVTRALAVPDVCVPLHLEDSID*TSVDSQ
Trigger: TTGTGAGTCCACTGAGGTCAAATCAATGGAGTCTTC...CAGGTGCAAAGGGACGCAGACGTCTGGGACAGCTAAGGCCCGTGTCACCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS-3UTR CAA 90 bp CCAGCTGAGAGCTCACGGCCTCTGCCCCTTCCCGCCAGCTCGCATTCCTGCACCACTGAATGGCCTTTGTaGTCCTTACTTCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: PAESSRPLPLPASSHSCTTEWPL*SLLQIS
Trigger: ACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGT...GGTGCAGGAATGCGAGCTGGCGGGAAGGGGCAGAGGCCGTGAGCTCTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAATCAGGGCGCCGCACAGCTGAACCCTGCGCAGGACAGAGGGGCGCGGACAGCACTGAATGGCCTTTGTaGTCCTTACTTCAGATTAGT +
Preference number: 5 (lower is better)
Translates to: KSGRRTAEPCAGQRGADSTEWPL*SLLQIS
Trigger: ACTAATCTGAAGTAAGGACAACAAAGGCCATTCAGT...GCTGTCCGCGCCCCTCTGTCCTGCGCAGGGTTCAGCTGTGCGGCGCCCTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACCTGGCCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGCACTTACATTCCTCTTaGCACAAGTGGCTATCTCAC +
Preference number: 5 (lower is better)
Translates to: TWPPRRVLQTGRAGSHGWHLHSS*HKWLSH
Trigger: GTGAGATAGCCACTTGTGCAAAGAGGAATGTAAGTG...CCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS GCA 90 bp GGATCTGCGAGATGTACACTTGGCAGGACAGGATGGCACAATCTATaGCAAACCCTCGCTTGGAGTTCCCGGGGCTGTGGTGGATGTACT +
Preference number: 5 (lower is better)
Translates to: GSARCTLGRTGWHNL*QTLAWSSRGCGGCT
Trigger: AGTACATCCACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp ACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCGTCAGGACTCACAAGGGTCTTaGGACGGGACAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: TATPHPLLSCLQLFYSRQDSQGS*DGTALR
Trigger: CCTCAGGGCTGTCCCGTCCAAAGACCCTTGTGAGTC...CTGACGACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS-3UTR CAA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGCCAATGGGCTGCCGGTaGGGGACATCGCCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPPMGCR*GTSPRA
Trigger: GGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGG...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGGCCAGGCGGGGCAGCTaGGTCTTGGCGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPARRGS*VLASSW
Trigger: CCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGGC...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTCCCTGGCTGGCACTGGCTTCCGGCACGTTCATACCCTGACAGTGACTGTGGCAATGTTCTTGAAGTCTaGAAAGTCAGCCCTCTGCGA +
Preference number: 5 (lower is better)
Translates to: VPGWHWLPARSYPDSDCGNVLEV*KVSPLR
Trigger: TCGCAGAGGGCTGACTTTCAAGACTTCAAGAACATT...GCCACAGTCACTGTCAGGGTATGAACGTGCCGGAAGCCAGTGCCAGCCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CCTCCTAGGAGAGTCCTTCAGACGGGACGAGCGGGGTCACATGGCTGGGCGCAGCTTTACTTAGCTGACTaGTATAGGGAACAAAACCAC +
Preference number: 5 (lower is better)
Translates to: PPRRVLQTGRAGSHGWAQLYLAD*YREQNH
Trigger: GTGGTTTTGTTCCCTATACAAGTCAGCTAAGTAAAG...CTGCGCCCAGCCATGTGACCCCGCTCGTCCCGTCTGAAGGACTCTCCTAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp AAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCAGGCGTTCTGTCTCCACCGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KILSNSCGTSQCDEI*QTSIPAGVLSPPVP
Trigger: AGGGACCGGTGGAGACAGAACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS TCA 90 bp AAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCAGGCGTCACGGACTCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: KILSNSCGTSQCDEI*QTSIPAGVTDSVST
Trigger: GGTGGAGACAGAGTCCGTGACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CCA 90 bp GGTGTAGCCGCCGAGGGCGTCTTTTGTGGGGGAGCCACTTCCGTTTaGGACTTTAGCTTCATTCAAGTGATTATCCAGCAAGGTCTCGTC +
Preference number: 5 (lower is better)
Translates to: GVAAEGVFCGGATSV*DFSFIQVIIQQGLV
Trigger: GACGAGACCTTGCTGGATAATCACTTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGCGGCTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTAATGCCGAGTCGCTTTaGCTGCGCATGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: QATATPHPLLSCLQLFYSNAESL*LRMMST
Trigger: CGTGGACATCATGCGCAGCAAAAGCGACTCGGCATT...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTGCCAGGCGGGGCAGCTaGGTCTTGGCGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KWFRDESKCSESQRFLPPARRGS*VLASSW
Trigger: CCAGGAGCTCGCCAAGACCAAGCTGCCCCGCCTGGC...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCTGCGAGATGTACACTaGGCAGGACAGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLRDVH*AGQDGT
Trigger: TGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTCCTTCCCCCTGACGTaGGGAGCGGTCTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWSFPLT*GAVWRG
Trigger: GCCCCTCCAGACCGCTCCCAACGTCAGGGGGAAGGA...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGACACCCGAGGTAGCCTaGCGGCGGGACTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWTPEVA*RRDLGG
Trigger: GCCTCCCAAGTCCCGCCGCAAGGCTACCTCGGGTGT...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCTGTGTGCACGGGCCTaGTTCAACTCGGAACTGAAC +
Preference number: 5 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLCARA*FNSELN
Trigger: GTTCAGTTCCGAGTTGAACAAGGCCCGTGCACACAG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS CCA 90 bp TCACCGACTCAAATAAGACCCACTGTGGCTGTCAGGGCTGGGCCCTaGAGGTCTTTAAAGTTAAAGGTGCTGTCAGAGCACCCCATCTCA +
Preference number: 5 (lower is better)
Translates to: SPTQIRPTVAVRAGP*RSLKLKVLSEHPIS
Trigger: TGAGATGGGGTGCTCTGACAGCACCTTTAACTTTAAAGACCTCCAGGGCCCAGCCCTGACAGCCACAGTGGGTCTTATTTGAGTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519986.1
CDS CCA 90 bp TTCTGCATCACCGACTCAAATAAGACCCACTGTGGCTGTCAGGGCTaGGCCCTGGAGGTCTTTAAAGTTAAAGGTGCTGTCAGAGCACCC +
Preference number: 5 (lower is better)
Translates to: FCITDSNKTHCGCQG*ALEVFKVKGAVRAP
Trigger: GGGTGCTCTGACAGCACCTTTAACTTTAAAGACCTCCAGGGCCCAGCCCTGACAGCCACAGTGGGTCTTATTTGAGTCGGTGATGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519986.1
CDS-3UTR CAA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTCGGGGCAGCTTGGTCTaGGCGAGCTCCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETRGSLV*ASSWLV
Trigger: CACCAGCCAGGAGCTCGCCAAGACCAAGCTGCCCCG...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp TCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTCCTTGGCGGCTTCCTaGAGGAAGGTGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SVSLHRPFQIGLVLKRLWSLAAS*RKVARR
Trigger: CCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGA...CCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGAGCCTCCTCCCAGCTTaGGTGTGCGGTCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWSLLPA*VCGRCP
Trigger: TGGGCAGCGACCGCACACCAAAGCTGGGAGGAGGCT...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp TTTGTGGGGGAGCCACTTCCGTTTGGGACTTTAGCTTCATTCAAGTaGTTATCCAGCAAGGTCTCGTCCTCCTTGGCGGCTTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FVGEPLPFGTLASFK*LSSKVSSSLAASLR
Trigger: CCTCAAGGAAGCCGCCAAGGAGGACGAGACCTTGCTGGATAATCACTTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCCCCCACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTCCCGGCGTTGTAGGCTaGCCAGGCGGTCGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETPGVVG*PGGRVR
Trigger: TCGAACTCGACCGCCTGGCAAGCCTACAACGCCGGG...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AGCAGGTACCCAACTGCCACCCGGACACAAACACACAATCTACAAAGTGCCACCCAGATGAACCCACATTaGGTGTGGTTTGGGTCGGAT +
Preference number: 5 (lower is better)
Translates to: SRYPTATRTQTHNLQSATQMNPH*VWFGSD
Trigger: ATCCGACCCAAACCACACCAAATGTGGGTTCATCTG...GGTGGCACTTTGTAGATTGTGTGTTTGTGTCCGGGTGGCAGTTGGGTACCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GTCCAAGAGGCAGCACACAGCACTGACGTGTTCAGTGGCAGGTTGGAGGATTCCCAACATTATCCTAGTTaGGTAACTGGTCTGCGCACA +
Preference number: 5 (lower is better)
Translates to: VQEAAHSTDVFSGRLEDSQHYPS*VTGLRT
Trigger: TGTGCGCAGACCAGTTACCAAACTAGGATAATGTTG...GGAATCCTCCAACCTGCCACTGAACACGTCAGTGCTGTGTGCTGCCTCTTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTATGCTGCGCGACGGCTaGATCAGCACCACGGCGTTG +
Preference number: 5 (lower is better)
Translates to: KWFRDESKCSESQRFLPPMLRDG*ISTTAL
Trigger: CAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCAT...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTATGCCAAACCCTCGCTaGGAGTTCCCGGGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: KWFRDESKCSESQRFLPPMPNPR*EFPGLW
Trigger: CCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCAT...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGTGGTTTGGGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 5 (lower is better)
Translates to: KPTPTVSNRLSSKETVVWDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...CCAAACCACAGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp ATCATAAAGAAAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTCAATACCTGCAGGCGTCACGGACTC +
Preference number: 5 (lower is better)
Translates to: IIKKNTLQQLRHQPM*RDLTDVNTCRRHGL
Trigger: GAGTCCGTGACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTTTCTTTATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS-3UTR CAA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTGACGTCTGCGTCCCTTaGCACCTGTCCCGATTCCAG +
Preference number: 5 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETDVCVP*HLSRFQ
Trigger: CTGGAATCGGGACAGGTGCAAAGGGACGCAGACGTC...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AACCAGCTAAGACGGGAGCTGCGCCTCGAGATCCTGACAAGTACAGCCAGGTCTTGGTTAGTGTGGTATTaGCTTAGTAGCTCAAACCTA +
Preference number: 5 (lower is better)
Translates to: NQLRRELRLEILTSTARSWLVWY*LSSSNL
Trigger: TAGGTTTGAGCTACTAAGCAAATACCACACTAACCA...AGACCTGGCTGTACTTGTCAGGATCTCGAGGCGCAGCTCCCGTCTTAGCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS TCA 90 bp ATCATAAAGAAAAATACTCTCCAACAGCTGCGGCACCAGCCAATGTaGCGAGATCTGACAGACGTCAATACCTGCAGGCGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: IIKKNTLQQLRHQPM*RDLTDVNTCRRSVS
Trigger: GGAGACAGAACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGAGAGTATTTTTCTTTATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS-3UTR CAA 90 bp CCAGGTCTCAGAGAGGGGATCTACAGTCTTAAAGCCGCTAGAGGATCAAGTTGCGGCACTGAATGGCCTTaGTTGTCCTTACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: PGLREGIYSLKAARGSSCGTEWP*LSLLQI
Trigger: AATCTGAAGTAAGGACAACAAAGGCCATTCAGTGCC...GCAACTTGATCCTCTAGCGGCTTTAAGACTGTAGATCCCCTCTCTGAGACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGCGGCAGGAGACACGGCAAGACCAGAGGCCCATCAAGTACATTAAACAGTCGCTCCAACTTAATAAGTaGATAAAAAGCTGTCCCGTG +
Preference number: 5 (lower is better)
Translates to: QRQETRQDQRPIKYIKQSLQLNK*IKSCPV
Trigger: CACGGGACAGCTTTTTATCAACTTATTAAGTTGGAG...CGACTGTTTAATGTACTTGATGGGCCTCTGGTCTTGCCGTGTCTCCTGCCGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCTGCGAGATGTACACTaGGCAGGACAGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: KWFRDESKCSESQRFLPPLRDVH*AGQDGT
Trigger: TGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp CAGGCCACTGCCACCCCACATCCGCTGCTTTCTTGCCTCCAACTGTTTTATAGTCTCCAACTTAATAAGTaGATAAAAAGCTGTCCCGTG +
Preference number: 5 (lower is better)
Translates to: QATATPHPLLSCLQLFYSLQLNK*IKSCPV
Trigger: CACGGGACAGCTTTTTATCAACTTATTAAGTTGGAG...ACTATAAAACAGTTGGAGGCAAGAAAGCAGCGGATGTGGGGTGGCAGTGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS GCA 90 bp TGCTTCTGCTGTGTTCCTCGGGCAGGTAACACTTACATTCCTCTTTaGACAAGTGGCTATCTCACAACTTCTCACAACGGTATGAGACAT +
Preference number: 5 (lower is better)
Translates to: CFCCVPRAGNTYIPL*TSGYLTTSHNGMRH
Trigger: ATGTCTCATACCGTTGTGAGAAGTTGTGAGATAGCCACTTGTGCAAAGAGGAATGTAAGTGTTACCTGCCCGAGGAACACAGCAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS-3UTR CAA 90 bp GATCTCAGTAAGCCTACACCGACCGTTTCAAATAGGCTTAGTTCTAAAGAGACTCACATTTGGTGTGGTTaGGGTCGGATCTTGATTCGG +
Preference number: 5 (lower is better)
Translates to: DLSKPTPTVSNRLSSKETHIWCG*GRILIR
Trigger: CCGAATCAAGATCCGACCCAAACCACACCAAATGTG...AGTCTCTTTAGAACTAAGCCTATTTGAAACGGTCGGTGTAGGCTTACTGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS-3UTR CAA 90 bp GATAAAAAGCTGTCCCGTGGCCAGTTCACAATGGAACTAAATAGTTTCGTTCCGCAACATTATCCTAGTTaGGTAACTGGTCTGCGCACA +
Preference number: 5 (lower is better)
Translates to: DKKLSRGQFTMELNSFVPQHYPS*VTGLRT
Trigger: TGTGCGCAGACCAGTTACCAAACTAGGATAATGTTG...CGGAACGAAACTATTTAGTTCCATTGTGAACTGGCCACGGGACAGCTTTTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp TTCCTCTTTGCACAAGTGGCTATCTCACAACTTCTCACAACGGTATaGGACATGCAGCAACACAGAACGATTTTTGGTTGGATTTTAAAC +
Preference number: 5 (lower is better)
Translates to: FLFAQVAISQLLTTV*DMQQHRTIFGWILN
Trigger: GTTTAAAATCCAACCAAAAATCGTTCTGTGTTGCTGCATGTCTCATACCGTTGTGAGAAGTTGTGAGATAGCCACTTGTGCAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS-3UTR CAA 90 bp AAATGGTTTAGAGACGAATCAAAGTGCAGTGAAAGTCAACGTTTCCTTCCCCCTCTTTACTTAGCTGACTaGTATAGGGAACAAAACCAC +
Preference number: 5 (lower is better)
Translates to: KWFRDESKCSESQRFLPPLYLAD*YREQNH
Trigger: GTGGTTTTGTTCCCTATACAAGTCAGCTAAGTAAAG...AGGGGGAAGGAAACGTTGACTTTCACTGCACTTTGATTCGTCTCTAAACCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000519067.5
CDS TCA 90 bp TCAGTTAATACCAGTTTCATCATTATTACTGAAGAGGTGCTGAAGTaGTTTTTCTTGCTACAGAGAGGTGGGAAGGTGATACAAACAGGT +
Preference number: 5 (lower is better)
Translates to: SVNTSFIIITEEVLK*FFLLQRGGKVIQTG
Trigger: ACCTGTTTGTATCACCTTCCCACCTCTCTGTAGCAAGAAAAATCACTTCAGCACCTCTTCAGTAATAATGATGAAACTGGTATTAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS GCA 72 bp GCTCGCCCCCATCCAGGGCGCCGGGCTCCTCAGCGCTaGGCTCCTGCTGCGGGCTGTACTGCTCCTCGTCGA +
Preference number: 6 (lower is better)
Translates to: ARPHPGRRAPQR*APAAGCTAPRR
Trigger: TCGACGAGGAGCAGTACAGCCCGCAGCAGGAGCGCAGCGCTGAGGAGCCCGGCGCCCTGGATGGGGGCGAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 72 bp TGGCCCCGCCGCCCGCCCGCCCGCCCACCCGCCCACTaGAATGTGTGTAAACGGGAGTGCGGCTCAGACCAC +
Preference number: 6 (lower is better)
Translates to: WPRRPPARPPAH*NVCKRECGSDH
Trigger: GTGGTCTGAGCCGCACTCCCGTTTACACACATTCCAGTGGGCGGGTGGGCGGGCGGGCGGGCGGCGGGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS GCA 72 bp TCCCCGCTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTaGCGGTGCTGCCGCTGCCGCTTCTGCATGTCGTAC +
Preference number: 6 (lower is better)
Translates to: SPLEVVAPLWFR*RCCRCRFCMSY
Trigger: GTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAGCGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 72 bp GTCCAGGGCCAGCTCGTGCTCCGACTGTACCTCGTCTaGGAAGGCAGGGACGCCGTGCGGCTCGCCCCCATC +
Preference number: 6 (lower is better)
Translates to: VQGQLVLRLYLV*EGRDAVRLAPI
Trigger: GATGGGGGCGAGCCGCACGGCGTCCCTGCCTTCCCAGACGAGGTACAGTCGGAGCACGAGCTGGCCCTGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp CTGGAGGTGGTGGCCCCGCTCTGGTTCCGGTGCCGGTaGTGCCGCTGCCGCTTCTGCATGTCGTACAGGTCG +
Preference number: 6 (lower is better)
Translates to: LEVVAPLWFRCR*CRCRFCMSYRS
Trigger: CGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCACCACCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 72 bp AGTGGGACCCAAGCTTGCCGTAGTAGGAGAAGGTGCTaGAGGCCTGCCTGCGGAACGCGTGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SGTQACRSRRRC*RPACGTRAAAA
Trigger: GGCGGCGGCGGCACGCGTTCCGCAGGCAGGCCTCCAGCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp AGCAGTGGGACCCAAGCTTGCCGTAGTAGGAGAAGGTaGTGGAGGCCTGCCTGCGGAACGCGTGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SSGTQACRSRRR*WRPACGTRAAA
Trigger: GGCGGCGGCACGCGTTCCGCAGGCAGGCCTCCAGCACCTTCTCCTACTACGGCAAGCTTGGGTCCCACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp CTCTGGTTCCGGTGCCGGTGCTGCCGCTGCCGCTTCTaGATGTCGTACAGGTCGCTCATGCTGCGCGACGGC +
Preference number: 6 (lower is better)
Translates to: LWFRCRCCRCRF*MSYRSLMLRDG
Trigger: GCCGTCGCGCAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp GTGGCCCCGCTCTGGTTCCGGTGCCGGTGCTGCCGCTaGCGCTTCTGCATGTCGTACAGGTCGCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: VAPLWFRCRCCR*RFCMSYRSLML
Trigger: CAGCATGAGCGACCTGTACGACATGCAGAAGCGGCAGCGGCAGCACCGGCACCGGAACCAGAGCGGGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp GCGGCTCAGACCACGGACTCTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTGAGCTTCAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: AAQTTDSVSTGP*RPSFRVSFSTV
Trigger: CACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGGTCTGAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS GCA 72 bp CCTGCAGGCGTCACGGACTCTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTGAGCTTCAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: PAGVTDSVSTGP*RPSFRVSFSTV
Trigger: CACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAGTCCGTGACGCCTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CCA 72 bp GGGCACCTGTCTTCACTGGCAGGCACCTGTCTTCACTaGCCAGCTCCTCGGGCAGGCACTCCCCGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GHLSSLAGTCLH*PAPRAGTPRSW
Trigger: CCAGCTGCGGGGAGTGCCTGCCCGAGGAGCTGGCCAGTGAAGACAGGTGCCTGCCAGTGAAGACAGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS CAA 72 bp CCCAGCACCGTGAGCACGATGCCAATGGGCTGCCGGTaGGGGACATCGCCGAGGGCCAGACCGATGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PSTVSTMPMGCR*GTSPRARPMAE
Trigger: CTCTGCCATCGGTCTGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGTGCTCACGGTGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS TCA 72 bp TGGCTCCGCCGAGGCCGGCAGAGAAGGCGTGGATGTTaGGGGCCATGTCCTGCTCCTCGCTGTCCACCACGT +
Preference number: 6 (lower is better)
Translates to: WLRRGRQRRRGC*GPCPAPRCPPR
Trigger: ACGTGGTGGACAGCGAGGAGCAGGACATGGCCCTCAACATCCACGCCTTCTCTGCCGGCCTCGGCGGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS TCA 72 bp GCATGTCGTACAGGTCGCTCATGCTGCGCGACGGCTTaGTCAGCACCACGGCGTTGGCGCGCCGGTAGCGGT +
Preference number: 6 (lower is better)
Translates to: ACRTGRSCCATA*SAPRRWRAGSG
Trigger: ACCGCTACCGGCGCGCCAACGCCGTGGTGCTGATCAAGCCGTCGCGCAGCATGAGCGACCTGTACGACATGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp ACCACTCCCAGCACCGTGAGCACGATGCCAATGGGCTaGCGGTTGGGGACATCGCCGAGGGCCAGACCGATG +
Preference number: 6 (lower is better)
Translates to: TTPSTVSTMPMG*RLGTSPRARPM
Trigger: CATCGGTCTGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGTGCTCACGGTGCTGGGAGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS CCA 72 bp GGCACAGCCGCATCAGCTCCCTGGGCATCTTCAGCATaGAGAGCCACAGCAGGCGCACCGTGGTCTCGCCCT +
Preference number: 6 (lower is better)
Translates to: GTAASAPWASSA*RATAGAPWSRP
Trigger: AGGGCGAGACCACGGTGCGCCTGCTGTGGCTCTCCATGCTGAAGATGCCCAGGGAGCTGATGCGGCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CAA 72 bp ATGGCTCCGCCGAGGCCGGCAGAGAAGGCGTGGATGTaGAGGGCCATGTCCTGCTCCTCGCTGTCCACCACG +
Preference number: 6 (lower is better)
Translates to: MAPPRPAEKAWM*RAMSCSSLSTT
Trigger: CGTGGTGGACAGCGAGGAGCAGGACATGGCCCTCAACATCCACGCCTTCTCTGCCGGCCTCGGCGGAGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CAA 90 bp ACCACCACTCCCAGCACCGTGAGCACGATGCCAATGGGCTGCCGGTaGGGGACATCGCCGAGGGCCAGACCGATGGCAGAGCCGTTAAGG +
Preference number: 6 (lower is better)
Translates to: TTTPSTVSTMPMGCR*GTSPRARPMAEPLR
Trigger: CCTTAACGGCTCTGCCATCGGTCTGGCCCTCGGCGATGTCCCCAACCGGCAGCCCATTGGCATCGTGCTCACGGTGCTGGGAGTGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS TCA 72 bp CTGTCTCCACCGGTCCCTGCAGGCCCTCCTTCCGCGTaGGCTTCAGCACGGTGGGCTTTTCGCTGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LSPPVPAGPPSA*ASARWAFRCSH
Trigger: GTGGGAACAGCGAAAAGCCCACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp ACAGGCGCATGGGGATTCGGTCTATGGACCCCTCGCTaGTGGTCTCGCAGTTCTCGGCCTCTGCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: TGAWGFGLWTPR*WSRSSRPLRLR
Trigger: CCGGAGGCGCAGAGGCCGAGAACTGCGAGACCATCAGCGAGGGGTCCATAGACCGAATCCCCATGCGCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS GCA 72 bp GCTTTCCCCATAGATGATGCTGTCCCTGCCGCCCTGTaGCAGGCACCTCCCAGCAACTCCCAGGGGGCCACT +
Preference number: 6 (lower is better)
Translates to: AFPIDDAVPAAL*QAPPSNSQGAT
Trigger: AGTGGCCCCCTGGGAGTTGCTGGGAGGTGCCTGGCACAGGGCGGCAGGGACAGCATCATCTATGGGGAAAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS GCA 72 bp GGGCTCCAGGTCCAGCGCGGTGTCCGGCACGTGCAATaGCGAGTCGCTTTTGCTGCGCATGATGTCCACGTC +
Preference number: 6 (lower is better)
Translates to: GLQVQRGVRHVQ*RVAFAAHDVHV
Trigger: GACGTGGACATCATGCGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGACACCGCGCTGGACCTGGAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp AGCTCGGGCTCCAGGTCCAGCGCGGTGTCCGGCACGTaGAATGCCGAGTCGCTTTTGCTGCGCATGATGTCC +
Preference number: 6 (lower is better)
Translates to: SSGSRSSAVSGT*NAESLLLRMMS
Trigger: GGACATCATGCGCAGCAAAAGCGACTCGGCATTGCACGTGCCGGACACCGCGCTGGACCTGGAGCCCGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp TCAGCACGGTGGGCTTTTCGCTGTTCCCACCGGCCCTaGCTTCGCCGGCCAACGGGGAAGACAGGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SARWAFRCSHRP*LRRPTGKTGLS
Trigger: AGAAAGGCCTGTCTTCCCCGTTGGCCGGCGAAGGCAGGGCCGGTGGGAACAGCGAAAAGCCCACCGTGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp CGCCCACCCGCCCACTGGAATGTGTGTAAACGGGAGTaGGGCTCAGACCACGGACTCTGTCTCCACCGGTCC +
Preference number: 6 (lower is better)
Translates to: RPPAHWNVCKRE*GSDHGLCLHRS
Trigger: GGACCGGTGGAGACAGAGTCCGTGGTCTGAGCCGCACTCCCGTTTACACACATTCCAGTGGGCGGGTGGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519067.5
CDS TCA 72 bp CCGGCACGTGCAATGCCGAGTCGCTTTTGCTGCGCATaGTGTCCACGTCCGGGTAGTCCAGGGCCAGCTCGT +
Preference number: 6 (lower is better)
Translates to: PARAMPSRFCCA*CPRPGSPGPAR
Trigger: ACGAGCTGGCCCTGGACTACCCGGACGTGGACATCATGCGCAGCAAAAGCGACTCGGCATTGCACGTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp TGGCGCTCCAGAAAGCCAGCGGGAACATTCCGCAGCTaGTGTCCTGTCTCAGGGCCGACCCTGTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: WRSRKPAGTFRS*CPVSGPTLCPA
Trigger: AGCTGGACACAGGGTCGGCCCTGAGACAGGACAGCAGCTGCGGAATGTTCCCGCTGGCTTTCTGGAGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS GCA 72 bp GTCAATACCTGCAGGCGTTCTGTCTCCACCGGTCCCTaGAGGCCCTCCTTCCGCGTGAGCTTCAGCACGGTG +
Preference number: 6 (lower is better)
Translates to: VNTCRRSVSTGP*RPSFRVSFSTV
Trigger: CACCGTGCTGAAGCTCACGCGGAAGGAGGGCCTGCAGGGACCGGTGGAGACAGAACGCCTGCAGGTATTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS TCA 72 bp TATCCAGCAAGGTCTCGTCCTCCTTGGCGGCTTCCTTaGGGAAGGTGGCCAGGCGGGGCAGCTTGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: YPARSRPPWRLP*GRWPGGAAWSW
Trigger: CCAAGACCAAGCTGCCCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTTGCTGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS GCA 72 bp AGAAGAAGAGCACCTGGTTCTGGGTCCGGAACCAGCTaGCCAGGAAGGTCTGGGTCCAGTCCAGCCCACCCA +
Preference number: 6 (lower is better)
Translates to: RRRAPGSGSGTS*PGRSGSSPAHP
Trigger: TGGGTGGGCTGGACTGGACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS GCA 72 bp TGCGGGCTGTACTGCTCCTCGTCGATGCTGAACAGGTaGAGGGCCACGGACACCGTGAAGATGATGGCGGCA +
Preference number: 6 (lower is better)
Translates to: CGLYCSSSMLNR*RATDTVKMMAA
Trigger: TGCCGCCATCATCTTCACGGTGTCCGTGGCCCTGCACCTGTTCAGCATCGACGAGGAGCAGTACAGCCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CAA 72 bp CTGCTGTCCTGTCTCAGGGCCGACCCTGTGTCCAGCTaGTGGGCACCTGTCTTCACTGGCAGGCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: LLSCLRADPVSS*WAPVFTGRHLS
Trigger: AGACAGGTGCCTGCCAGTGAAGACAGGTGCCCACAAGCTGGACACAGGGTCGGCCCTGAGACAGGACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS TCA 72 bp ATACAAACAGGTGGTCCGCTGGTAATCCCCATCGAGTaGCTGGATGATCTGTCTCCTCCGGCCGGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: IQTGGPLVIPIE*LDDLSPPAGAA
Trigger: CGCGGCCCCGGCCGGAGGAGACAGATCATCCAGTCACTCGATGGGGATTACCAGCGGACCACCTGTTTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS GCA 72 bp GAGGGCCAGACCGATGGCAGAGCCGTTAAGGAAAAGTaGAACGCCAAAGAGGACGCCAACGCAGAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: EGQTDGRAVKEK*NAKEDANAEGE
Trigger: CTCGCCCTCTGCGTTGGCGTCCTCTTTGGCGTTGCACTTTTCCTTAACGGCTCTGCCATCGGTCTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000519986.1
ENST00000520137.1
CDS GCA 72 bp CGACGTAGACGTTGGGAAACATGGCCATCACGGCTGTaGCGACAGAGAAGCCCAGCGTCCCCAGCACGTAGA +
Preference number: 6 (lower is better)
Translates to: RRRRWETWPSRL*RQRSPASPARR
Trigger: TCTACGTGCTGGGGACGCTGGGCTTCTCTGTCGGCACAGCCGTGATGGCCATGTTTCCCAACGTCTACGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CAA 72 bp TTATCCAGCAAGGTCTCGTCCTCCTTGGCGGCTTCCTaGAGGAAGGTGGCCAGGCGGGGCAGCTTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LSSKVSSSLAAS*RKVARRGSLVL
Trigger: CAAGACCAAGCTGCCCCGCCTGGCCACCTTCCTCAAGGAAGCCGCCAAGGAGGACGAGACCTTGCTGGATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CAA 90 bp CACGCCCCCAAGGGCAGAGGCCACCAGGATCTGCGAGATGTACACTaGGCAGGACAGGATGGCACAATCTATGCCAAACCCTCGCTTGGA +
Preference number: 6 (lower is better)
Translates to: HAPKGRGHQDLRDVH*AGQDGTIYAKPSLG
Trigger: TCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTCTGCCCTTGGGGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp GCTTTCTGCGGGTCCGGCAGGGGCACGGATAACTCTTaGACTTGCATAGATTCCGGGTCGGCATTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: AFCGSGRGTDNS*TCIDSGSAFCG
Trigger: TCCGCAGAATGCCGACCCGGAATCTATGCAAGTTCAAGAGTTATCCGTGCCCCTGCCGGACCCGCAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS CCA 72 bp AAGATGATGGCGGCAAAGAAGAAGAGCACCTGGTTCTaGGTCCGGAACCAGCTGCCCAGGAAGGTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: KMMAAKKKSTWF*VRNQLPRKVWV
Trigger: GACCCAGACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTTTGCCGCCATCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 72 bp ACCGTGAAGATGATGGCGGCAAAGAAGAAGAGCACCTaGTTCTGGGTCCGGAACCAGCTGCCCAGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: TVKMMAAKKKST*FWVRNQLPRKV
Trigger: GACCTTCCTGGGCAGCTGGTTCCGGACCCAGAACCAGGTGCTCTTCTTCTTTGCCGCCATCATCTTCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
ENST00000520137.1
CDS CCA 72 bp CCTCCTCTGACACGTTGGGATAGATCACCAGGAATGTaGCCGTCAGGAAGCCCAGGAAAGAGCCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: PPLTRWDRSPGM*PSGSPGKSPQR
Trigger: CCTCTGTGGGCTCTTTCCTGGGCTTCCTGACGGCCACATTCCTGGTGATCTATCCCAACGTGTCAGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp TCCAACAGCTGCGGCACCAGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCAGGCGTCACGGACTCT +
Preference number: 6 (lower is better)
Translates to: SNSCGTSQCDEI*QTSIPAGVTDS
Trigger: AGAGTCCGTGACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CAA 72 bp CAGGACAGGATGGCACAATCTATGCCAAACCCTCGCTaGGAGTTCCCGGGGCTGTGGTGGATGTACTGCTTG +
Preference number: 6 (lower is better)
Translates to: QDRMAQSMPNPR*EFPGLWWMYCL
Trigger: CAAGCAGTACATCCACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp CAGAGAAGCCCAGCGTCCCCAGCACGTAGATCACCCTaGCGCTCAGGTCGTAGTTGTCCAAGTACTTCTGTA +
Preference number: 6 (lower is better)
Translates to: QRSPASPARRSP*RSGRSCPSTSV
Trigger: TACAGAAGTACTTGGACAACTACGACCTGAGCGTCAGGGTGATCTACGTGCTGGGGACGCTGGGCTTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp TCCAACAGCTGCGGCACCAGCCAATGTGACGAGATCTaGCAGACGTCAATACCTGCAGGCGTTCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SNSCGTSQCDEI*QTSIPAGVLSP
Trigger: TGGAGACAGAACGCCTGCAGGTATTGACGTCTGTCAGATCTCGTCACATTGGCTGGTGCCGCAGCTGTTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000024061.7
CDS GCA 72 bp AGATGTACACTTGGCAGGACAGGATGGCACAATCTATaGCAAACCCTCGCTTGGAGTTCCCGGGGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RCTLGRTGWHNL*QTLAWSSRGCG
Trigger: ACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CAA 72 bp TCCATTGATTTGACCTCAGTGGACTCACAAGGGTCTTaGGACGGGACAGCCCTGAGGCTGGGCTTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: SIDLTSVDSQGS*DGTALRLGLLS
Trigger: GGAAAGCAAGCCCAGCCTCAGGGCTGTCCCGTCCAAAGACCCTTGTGAGTCCACTGAGGTCAAATCAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS CAA 72 bp AAGGGCAGAGGCCACCAGGATCTGCGAGATGTACACTaGGCAGGACAGGATGGCACAATCTATGCCAAACCC +
Preference number: 6 (lower is better)
Translates to: KGRGHQDLRDVH*AGQDGTIYAKP
Trigger: GGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTACATCTCGCAGATCCTGGTGGCCTCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CAA 90 bp TACACTTGGCAGGACAGGATGGCACAATCTATGCCAAACCCTCGCTaGGAGTTCCCGGGGCTGTGGTGGATGTACTGCTTGATGTCATGG +
Preference number: 6 (lower is better)
Translates to: YTWQDRMAQSMPNPR*EFPGLWWMYCLMSW
Trigger: CCATGACATCAAGCAGTACATCCACCACAGCCCCGGGAACTCCAAGCGAGGGTTTGGCATAGATTGTGCCATCCTGTCCTGCCAAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS TCA 72 bp ACTGCTCCGGAAGGCCAATCTGCAACAGTATTGGTGTaGCCAGAGCGGTTTCCATGGCGTAACAGAACTCCC +
Preference number: 6 (lower is better)
Translates to: TAPEGQSATVLV*PERFPWRNRTP
Trigger: GGGAGTTCTGTTACGCCATGGAAACCGCTCTGGTCACACCAATACTGTTGCAGATTGGCCTTCCGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CCA 72 bp CAAATAAGACCCACTGTGGCTGTCAGGGCTGGGCCCTaGAGGTCTTTAAAGTTAAAGGTGCTGTCAGAGCAC +
Preference number: 6 (lower is better)
Translates to: QIRPTVAVRAGP*RSLKLKVLSEH
Trigger: GTGCTCTGACAGCACCTTTAACTTTAAAGACCTCCAGGGCCCAGCCCTGACAGCCACAGTGGGTCTTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519986.1
CDS CCA 72 bp ACCGACTCAAATAAGACCCACTGTGGCTGTCAGGGCTaGGCCCTGGAGGTCTTTAAAGTTAAAGGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: TDSNKTHCGCQG*ALEVFKVKGAV
Trigger: GACAGCACCTTTAACTTTAAAGACCTCCAGGGCCCAGCCCTGACAGCCACAGTGGGTCTTATTTGAGTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519986.1
CDS CAA 72 bp ACTGCTCCGGAAGGCCTTTCTGAAGACTCCATTGATTaGACCTCAGTGGACTCACAAGGGTCTTTGGACGGG +
Preference number: 6 (lower is better)
Translates to: TAPEGLSEDSID*TSVDSQGSLDG
Trigger: CCCGTCCAAAGACCCTTGTGAGTCCACTGAGGTCAAATCAATGGAGTCTTCAGAAAGGCCTTCCGGAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000024061.7
ENST00000519067.5
CDS TCA 72 bp GAGCCACTTCCGTTTGGGACTTTAGCTTCATTCAAGTaGTTATCCAGCAAGGTCTCGTCCTCCTTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: EPLPFGTLASFK*LSSKVSSSLAA
Trigger: AGCCGCCAAGGAGGACGAGACCTTGCTGGATAATCACTTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 72 bp GCCGAGGGCGTCTTTTGTGGGGGAGCCACTTCCGTTTaGGACTTTAGCTTCATTCAAGTGATTATCCAGCAA +
Preference number: 6 (lower is better)
Translates to: AEGVFCGGATSV*DFSFIQVIIQQ
Trigger: TTGCTGGATAATCACTTGAATGAAGCTAAAGTCCCAAACGGAAGTGGCTCCCCCACAAAAGACGCCCTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000024061.7
ENST00000517878.6
ENST00000519067.5
CDS CCA 72 bp GTAGTACTGCTCCGGAAGGCCAATCTGCAACAGTATTaGTGTGACCAGAGCGGTTTCCATGGCGTAACAGAA +
Preference number: 6 (lower is better)
Translates to: VVLLRKANLQQY*CDQSGFHGVTE
Trigger: TTCTGTTACGCCATGGAAACCGCTCTGGTCACACCAATACTGTTGCAGATTGGCCTTCCGGAGCAGTACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517878.6
CDS CCA 72 bp AGAGGTGCTGAAGTGATTTTTCTTGCTACAGAGAGGTaGGAAGGTGATACAAACAGGTGGTCCGCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: RGAEVIFLATER*EGDTNRWSAGN
Trigger: ATTACCAGCGGACCACCTGTTTGTATCACCTTCCCACCTCTCTGTAGCAAGAAAAATCACTTCAGCACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS TCA 72 bp GCACAAGTGGCTATCTCACAACTTCTCACAACGGTATaGGACATGCAGCAACACAGAACGATTTTTGGTTGG +
Preference number: 6 (lower is better)
Translates to: AQVAISQLLTTV*DMQQHRTIFGW
Trigger: CCAACCAAAAATCGTTCTGTGTTGCTGCATGTCTCATACCGTTGTGAGAAGTTGTGAGATAGCCACTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS TCA 72 bp ACCAGTTTCATCATTATTACTGAAGAGGTGCTGAAGTaGTTTTTCTTGCTACAGAGAGGTGGGAAGGTGATA +
Preference number: 6 (lower is better)
Translates to: TSFIIITEEVLK*FFLLQRGGKVI
Trigger: TATCACCTTCCCACCTCTCTGTAGCAAGAAAAATCACTTCAGCACCTCTTCAGTAATAATGATGAAACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1
CDS CCA 72 bp AACGGTATGAGACATGCAGCAACACAGAACGATTTTTaGTTGGATTTTAAACATATGGCTTGCTGGTTTACT +
Preference number: 6 (lower is better)
Translates to: NGMRHAATQNDF*LDFKHMACWFT
Trigger: AGTAAACCAGCAAGCCATATGTTTAAAATCCAACCAAAAATCGTTCTGTGTTGCTGCATGTCTCATACCGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517878.6
ENST00000521804.1