RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC45A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164175

Ensembl transcript IDs: ENST00000296589.9, ENST00000382102.7, ENST00000505056.1, ENST00000509381.1, ENST00000510600.1, ENST00000626082.1, ENST00000626332.2, ENST00000631255.2, ENST00000631273.1

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACTGCATAGGCGCTTGTTCACTAGTTGCGTTCCAAGGTTTAAATaGCACAGGTCCCGCTCAGGGCAGCAAAGTGGGGATTACCACCCA +
Preference number: 1 (lower is better)
Translates to: ALHRRLFTSCVPRFK*HRSRSGQQSGDYHP
Trigger: TGGGTGGTAATCCCCACTTTGCTGCCCTGAGCGGGACCTGTGCCATTTAAACCTTGGAACGCAACTAGTGAACAAGCGCCTATGCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 90 bp AACATCCCCAGTGTAACACAGCTTCCAAGTGAGAGAGGCAGGATTTaGATCCAGGTTTCTCTGAGCCTGAAGCGTAGGTTTTCTTCCCCC +
Preference number: 1 (lower is better)
Translates to: NIPSVTQLPSERGRI*IQVSLSLKRRFSSP
Trigger: GGGGGAAGAAAACCTACGCTTCAGGCTCAGAGAAACCTGGATTCAAATCCTGCCTCTCTCACTTGGAAGCTGTGTTACACTGGGGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 90 bp GGATTACCACCCATGATTCCAGCTTTCCTTCTCACACATGGGGTCTaGCTTACTAAAATCTGGACTCCATTGCCTAGGACTTTCCTACCC +
Preference number: 1 (lower is better)
Translates to: GLPPMIPAFLLTHGV*LTKIWTPLPRTFLP
Trigger: GGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTTTAGTAAGTCAGACCCCATGTGTGAGAAGGAAAGCTGGAATCATGGGTGGTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 90 bp GTGAGCATGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTaGCTGTTGCTGTTTCAAGAACCCTTATTTTCCAGCTCTGCTCTA +
Preference number: 1 (lower is better)
Translates to: VSMPVPDHGCSWLGI*LLLFQEPLFSSSAL
Trigger: TAGAGCAGAGCTGGAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR GCA 90 bp GGGCATTTGACTGTTGCTGTTTCAAGAACCCTTATTTTCCAGCTCTaGTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGT +
Preference number: 1 (lower is better)
Translates to: GHLTVAVSRTLIFQL*STHCYQILPSLQMS
Trigger: ACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTGGAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 90 bp GGAGAGAGAAAGACTTACAAGAATAAAGTGAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGA +
Preference number: 1 (lower is better)
Translates to: GERKTYKNKVRKTRS*CTSPNIQPRLLFRR
Trigger: TCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTCACTTTATTCTTGTAAGTCTTTCTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
3UTR-3UTR TCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATGCTGGGCTGGGCTGGTaGGCATGCCTGTACCAGATC +
Preference number: 2 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNAGLGW*ACLYQI
Trigger: GATCTGGTACAGGCATGCTCACCAGCCCAGCCCAGC...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTTCCCCAGCCTTCAGATaGGTCTGGATGTTACCCAAG +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLSPAFR*VWMLPK
Trigger: CTTGGGTAACATCCAGACTCATCTGAAGGCTGGGGA...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCACCAGGGAGACCTATaGGGTGGTTACAGAAGACCT +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLHQGDL*GGYRRP
Trigger: AGGTCTTCTGTAACCACCTCATAGGTCTCCCTGGTG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTGGGAGACCTATGAGGTaGTTACAGAAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLGRPMR*LQKTWV
Trigger: GACCCAGGTCTTCTGTAACCACCTCATAGGTCTCCC...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTGCCTGTACCAGATCATaGTTGCAGTTGGTTGGGCAT +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLACTRS*LQLVGH
Trigger: ATGCCCAACCAACTGCAACCATGATCTGGTACAGGC...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCTCAGGGCAGCAAAGTaGGGATTACCACCCATGATT +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLLRAAK*GLPPMI
Trigger: AATCATGGGTGGTAATCCCCACTTTGCTGCCCTGAG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CAA 90 bp CTGGGCTGGGCTGGTGAGCATGCCTGTACCAGATCATGGTTGCAGTaGGTTGGGCATTTGACTGTTGCTGTTTCAAGAACCCTTATTTTC +
Preference number: 2 (lower is better)
Translates to: LGWAGEHACTRSWLQ*VGHLTVAVSRTLIF
Trigger: GAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCACCAGCCCAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCTCCCCAGCCTTCAGATaGGTCTGGATGTTACCCAAG +
Preference number: 2 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFSPAFR*VWMLPK
Trigger: CTTGGGTAACATCCAGACTCATCTGAAGGCTGGGGA...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCTCACACATGGGGTCTaGCTTACTAAAATCTGGACT +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLLTHGV*LTKIWT
Trigger: AGTCCAGATTTTAGTAAGTCAGACCCCATGTGTGAG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CAA 90 bp GGTGAGCATGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTaGACTGTTGCTGTTTCAAGAACCCTTATTTTCCAGCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: GEHACTRSWLQLVGH*TVAVSRTLIFQLCS
Trigger: AGAGCAGAGCTGGAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTAGTTGGTTGGGCATTTaGCTGTTGCTGTTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLSWLGI*LLLFQE
Trigger: TTCTTGAAACAGCAACAGTCAAATGCCCAACCAACT...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTCACCAGGGAGACCTATaGGGTGGTTACAGAAGACCT +
Preference number: 2 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIHQGDL*GGYRRP
Trigger: AGGTCTTCTGTAACCACCTCATAGGTCTCCCTGGTG...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR GCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATAAATCTGGACTCCATTaGCTAGGACTTTCCTACCCT +
Preference number: 2 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNKSGLH*LGLSYP
Trigger: AGGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR GCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATCGCTTGTTCACTAGTTaGGTTCCAAGGTTTAAATGG +
Preference number: 2 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNRLFTS*VPRFKW
Trigger: CCATTTAAACCTTGGAACGCAACTAGTGAACAAGCG...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCGGGAGACCTATGAGGTaGTTACAGAAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETGRPMR*LQKTWV
Trigger: GACCCAGGTCTTCTGTAACCACCTCATAGGTCTCCC...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAAATGTTTGCCAGGGGATaGGGAAAGCCACACCTCTTT +
Preference number: 2 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKMFARG*GKPHLF
Trigger: AAAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACAT...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR GCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAACTCTGCTCTACACATTaGTACCAAATCCTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKLCSTH*YQILPS
Trigger: GCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAG...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR GCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGCTTATTTTCCAGCTCTaGTCTACACATTGCTACCAA +
Preference number: 2 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVLIFQL*STHCYQ
Trigger: TTGGTAGCAATGTGTAGAGCAGAGCTGGAAAATAAG...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp CAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATC +
Preference number: 2 (lower is better)
Translates to: QVVLDQKLLEDILRREKDRKTRS*CTSPNI
Trigger: GATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCT...GTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
3UTR-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTGTGGTAATTTTAGAGTaGAAACACCAACTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLVVILE*KHQLCY
Trigger: ATAACAGAGTTGGTGTTTCCACTCTAAAATTACCAC...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp GTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACTTAAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATC +
Preference number: 2 (lower is better)
Translates to: VVLDQKLLEDILRREKDLRKTRS*CTSPNI
Trigger: GATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCT...TAAGTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
3UTR-3UTR GCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTTGGGCATTTGACTGTTaGTGTTTCAAGAACCCTTAT +
Preference number: 2 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIWAFDC*CFKNPY
Trigger: ATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCA...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGGTTCCAAGGTTTAAATaGCACAGGTCCCGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: WIKLGVISVAFISLLQLRVPRFK*HRSRSG
Trigger: CCCTGAGCGGGACCTGTGCCATTTAAACCTTGGAAC...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCTCAGGGCAGCAAAGTaGGGATTACCACCCATGATT +
Preference number: 2 (lower is better)
Translates to: WIKLGVISVAFISLLQLRLRAAK*GLPPMI
Trigger: AATCATGGGTGGTAATCCCCACTTTGCTGCCCTGAG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGTCCACTATGTACCTCTaGAAGTTGGGGATAGGGAGA +
Preference number: 2 (lower is better)
Translates to: WIKLGVISVAFISLLQLRSTMYL*KLGIGR
Trigger: TCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGA...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGAGTTGGTTGGGCATTTaGCTGTTGCTGTTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: WIKLGVISVAFISLLQLRSWLGI*LLLFQE
Trigger: TTCTTGAAACAGCAACAGTCAAATGCCCAACCAACT...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR TCA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAACTTACAAGAATAAAGTaGGGAAAACACGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: IQVVLDQKLLEDILRREKLTRIK*GKHGVD
Trigger: ATCAACTCCGTGTTTTCCTCACTTTATTCTTGTAAG...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
3UTR CAA 90 bp TGGAGGGAGATAGTAAATGGTAAAGGGAGCACACAGTGTGCACTTTaGTGTATCATTGTGAATATATTATCTCACCTAAAAATGAACTCA +
Preference number: 2 (lower is better)
Translates to: WREIVNGKGSTQCAL*CIIVNILSHLKMNS
Trigger: TGAGTTCATTTTTAGGTGAGATAATATATTCACAATGATACACAAAAGTGCACACTGTGTGCTCCCTTTACCATTTACTATCTCCCTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CCA 72 bp CTGGGCTGGGCTGGTGAGCATGCCTGTACCAGATCATaGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTT +
Preference number: 3 (lower is better)
Translates to: LGWAGEHACTRS*LQLVGHLTVAV
Trigger: AACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCACCAGCCCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CCA 72 bp AGGCGCTTGTTCACTAGTTGCGTTCCAAGGTTTAAATaGCACAGGTCCCGCTCAGGGCAGCAAAGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: RRLFTSCVPRFK*HRSRSGQQSGD
Trigger: ATCCCCACTTTGCTGCCCTGAGCGGGACCTGTGCCATTTAAACCTTGGAACGCAACTAGTGAACAAGCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATGCTCTGCTCTACACATaGCTACCAAATCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNALLYT*LPNPPQ
Trigger: CTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGC...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTATATGTTCAGTGTTTTaGCAGTTTCATGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLICSVF*QFHAEL
Trigger: CAGCTCAGCATGAAACTGCAAAAACACTGAACATAT...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 72 bp CCCATGATTCCAGCTTTCCTTCTCACACATGGGGTCTaGCTTACTAAAATCTGGACTCCATTGCCTAGGACT +
Preference number: 3 (lower is better)
Translates to: PMIPAFLLTHGV*LTKIWTPLPRT
Trigger: AGTCCTAGGCAATGGAGTCCAGATTTTAGTAAGTCAGACCCCATGTGTGAGAAGGAAAGCTGGAATCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR GCA 72 bp TCAAGAACCCTTATTTTCCAGCTCTGCTCTACACATTaGTACCAAATCCTCCCCAGCCTTCAGATGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SRTLIFQLCSTH*YQILPSLQMSL
Trigger: CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTGGAAAATAAGGGTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR TCA 72 bp CCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTaGCTGTTGCTGTTTCAAGAACCCTTATTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: PVPDHGCSWLGI*LLLFQEPLFSS
Trigger: GCTGGAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR GCA 72 bp ACTGTTGCTGTTTCAAGAACCCTTATTTTCCAGCTCTaGTCTACACATTGCTACCAAATCCTCCCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: TVAVSRTLIFQL*STHCYQILPSL
Trigger: AAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTGGAAAATAAGGGTTCTTGAAACAGCAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR GCA 72 bp CACATGGGGTCTGACTTACTAAAATCTGGACTCCATTaGCTAGGACTTTCCTACCCTCAGCAAATAATGCCA +
Preference number: 3 (lower is better)
Translates to: HMGSDLLKSGLH*LGLSYPQQIMP
Trigger: TGGCATTATTTGCTGAGGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTTTAGTAAGTCAGACCCCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAATGTACCAGATCATGGTaGCAGTTGGTTGGGCATTTG +
Preference number: 3 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKCTRSW*QLVGHL
Trigger: CAAATGCCCAACCAACTGCAACCATGATCTGGTACA...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAAAAAATCTGGACTCCATaGCCTAGGACTTTCCTACCC +
Preference number: 3 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKKIWTP*PRTFLP
Trigger: GGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTTT...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCAGTTGGTTGGGCATTaGACTGTTGCTGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETQLVGH*TVAVSR
Trigger: TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTG...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAACAGTTGGTTGGGCATTaGACTGTTGCTGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKQLVGH*TVAVSR
Trigger: TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTG...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCAGATCATGGTTGCAGTaGGTTGGGCATTTGACTGTT +
Preference number: 3 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETRSWLQ*VGHLTV
Trigger: AACAGTCAAATGCCCAACCAACTGCAACCATGATCT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR-3UTR CAA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGAGGAAAACACGGAGTaGATGCACAAGCCCCAACAT +
Preference number: 3 (lower is better)
Translates to: IQVVLDQKLLEDILRREKEENTE*MHKPQH
Trigger: ATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTC...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
3UTR TCA 72 bp CAGCAAATAATGCCAAGAAATTCCACTATGTACCTCTaGAAGTTGGGGATAGGGAGACCCTTATTGTCGGTA +
Preference number: 3 (lower is better)
Translates to: QQIMPRNSTMYL*KLGIGRPLLSV
Trigger: TACCGACAATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGTCCGGCGGCCCCACCTaGACCGGCAGTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVSGGPT*TGSGRW
Trigger: CCAGCGACCACTGCCGGTCCAGGTGGGGCCGCCGGA...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTTCCGGCGGCCCCACCTaGACCGGCAGTGGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCSGGPT*TGSGRW
Trigger: CCAGCGACCACTGCCGGTCCAGGTGGGGCCGCCGGA...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCACCTGGACCGGCAGTaGTCGCTGGCCGATCCGACC +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLHLDRQ*SLADPT
Trigger: GGTCGGATCGGCCAGCGACCACTGCCGGTCCAGGTG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGACCGGCAGTGGTCGCTaGCCGATCCGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVTGSGR*PIRPRA
Trigger: AGCCCGTGGTCGGATCGGCCAGCGACCACTGCCGGT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGAGGAACCTTCCTaGGAGCCCACCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCGEEPS*EPTTSC
Trigger: GCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCC...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTGCTACCCATGGCCACTaGGAGAGGAACCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLATHGH*ERNLPA
Trigger: CGCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGC...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGTGGGCAGACCTACGCTaGGCAGGACTGGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVWADLR*AGLGSH
Trigger: ATGTGACCCCAGTCCTGCTCAGCGTAGGTCTGCCCA...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp GCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTTGGGCAGACCTACGCTaGGCAGGACTGGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: APTSNLDSSFVDEKLCGVWADLR*AGLGSH
Trigger: ATGTGACCCCAGTCCTGCTCAGCGTAGGTCTGCCCA...AACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTCAGCCTGCCCACTGTTaGTACCCATGGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCQPAHC*YPWPLG
Trigger: TCCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTG...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATGATCCGACCACGGGCTaGAGCAGGAATCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNDPTTG*SRNPRM
Trigger: CATCCTGGGATTCCTGCTGCAGCCCGTGGTCGGATC...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGCTACCCATGGCCACTaGGAGAGGAACCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCATHGH*ERNLPA
Trigger: CGCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGC...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGTACGCTGAGCAGGACTaGGGTCACATACGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLYAEQD*GHIRCL
Trigger: GAGGCAGCGTATGTGACCCCAGTCCTGCTCAGCGTA...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTTGCCCTGCGAGTCTGTaGAGAGGGCATGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCCPASL*RGHGSG
Trigger: TCCACTACCATGCCCTCTTCACAGACTCGCAGGGCA...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCCAGCCTGCCCACTGTTaGTACCCATGGCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFQPAHC*YPWPLG
Trigger: TCCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTG...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGTGGGGTCACATACGCTaGCTCCACCGCGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVWGHIR*LHRVAE
Trigger: TTCTGCTACGCGGTGGAGGCAGCGTATGTGACCCCA...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGCTTCCCAGCTCCAGATaGGCCCAGTCTATAGCACCC +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVLPSSR*AQSIAP
Trigger: GGGTGCTATAGACTGGGCCCATCTGGAGCTGGGAAG...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
3UTR CAA 72 bp GGCTGGGCTGGTGAGCATGCCTGTACCAGATCATGGTaGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GWAGEHACTRSW*QLVGHLTVAVS
Trigger: TGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCACCAGCCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAGCTGGGCTGGGCTGGTaGGCATGCCTGTACCAGATC +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRAGLGW*ACLYQI
Trigger: GATCTGGTACAGGCATGCTCACCAGCCCAGCCCAGC...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTGGAGAGGAACCTTCCTaGGAGCCCACCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIGEEPS*EPTTSC
Trigger: GCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCC...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp GCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTCTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCG +
Preference number: 4 (lower is better)
Translates to: APTSNLDSSFVDEKLCGVLCGVV*TIGIPA
Trigger: CGCGGGGATCCCTATAGTGCACACAACTCCACAGAG...AACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR CCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTCACTGTTGCTACCCATaGCCACTGGGAGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCHCCYP*PLGEEP
Trigger: AGGTTCCTCTCCCAGTGGCCATGGGTAGCAACAGTG...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp CAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACCACCTGGACCGGCAGTaGTCGCTGGCCGATCCGACC +
Preference number: 4 (lower is better)
Translates to: QVVLDQKLLEDILRREKDHLDRQ*SLADPT
Trigger: GGTCGGATCGGCCAGCGACCACTGCCGGTCCAGGTG...GTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGTGCACAGGACCAGGGTaGAGTAGACATTCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLCTGPG*SRHSGR
Trigger: TCTTCCCGAATGTCTACTCCACCCTGGTCCTGTGCA...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATCACCAGGGAGACCTATaGGGTGGTTACAGAAGACCT +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNHQGDL*GGYRRP
Trigger: AGGTCTTCTGTAACCACCTCATAGGTCTCCCTGGTG...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGTTACACCAAACAGGCTaGACAGGACCAGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVLHQTG*TGPGWS
Trigger: ACTCCACCCTGGTCCTGTGCAGCCTGTTTGGTGTAA...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAACCGGCAGTGGTCGCTaGCCGATCCGACCACGGGCT +
Preference number: 4 (lower is better)
Translates to: IQVVLDQKLLEDILRREKTGSGR*PIRPRA
Trigger: AGCCCGTGGTCGGATCGGCCAGCGACCACTGCCGGT...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATTGCACAGGACCAGGGTaGAGTAGACATTCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNCTGPG*SRHSGR
Trigger: TCTTCCCGAATGTCTACTCCACCCTGGTCCTGTGCA...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCAGTGTACAGGGTGCTaGACATTACACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLQCTGC*TLHQTG
Trigger: GCCTGTTTGGTGTAATGTCCAGCACCCTGTACACTG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATGTTCCAAGGTTTAAATaGCACAGGTCCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNVPRFK*HRSRSG
Trigger: CCCTGAGCGGGACCTGTGCCATTTAAACCTTGGAAC...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTAGAGTGGTAACACGTTaGGGCTGGAGGGAGATAGTA +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLRVVTR*GWREIV
Trigger: TACTATCTCCCTCCAGCCCCAACGTGTTACCACTCT...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCGACAATGGAGGGTCCTaGGGGGTTTGCTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETDNGGS*GVCCGG
Trigger: TCCCCCACAGCAAACCCCTCAGGACCCTCCATTGTC...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGTCCACTATGTACCTCTaGAAGTTGGGGATAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLSTMYL*KLGIGR
Trigger: TCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGA...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCATGTGGCGGCCAGCCTaGCCACTGTTGCTACCCATG +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETMWRPA*PLLLPM
Trigger: CATGGGTAGCAACAGTGGGCAGGCTGGCCGCCACAT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp GCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTAACATGGCCATGCTGTaGATGATGAGTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: APTSNLDSSFVDEKLCGVNMAML*MMSLLV
Trigger: CACCAGCAGACTCATCATGCACAGCATGGCCATGTT...AACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGGCACAGTGTACAGGGTaGTGGACATTACACCAAACA +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLAQCTG*WTLHQT
Trigger: TGTTTGGTGTAATGTCCAGCACCCTGTACACTGTGC...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTTGCAACCTCTGTAAGTaGGGCTTCAGAGATACTGCA +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLCNLCK*GFRDTA
Trigger: TGCAGTATCTCTGAAGCCCCACTTACAGAGGTTGCA...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATCCGCGGTACACAATCTaGCCCATGAAATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNPRYTI*PMKSVK
Trigger: CTTCACAGATTTCATGGGCCAGATTGTGTACCGCGG...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATCAGTGTACAGGGTGCTaGACATTACACCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNQCTGC*TLHQTG
Trigger: GCCTGTTTGGTGTAATGTCCAGCACCCTGTACACTG...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCGGGAGACCTATGAGGTaGTTACAGAAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFGRPMR*LQKTWV
Trigger: GACCCAGGTCTTCTGTAACCACCTCATAGGTCTCCC...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGCTCAGGGCAGCAAAGTaGGGATTACCACCCATGATT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVLRAAK*GLPPMI
Trigger: AATCATGGGTGGTAATCCCCACTTTGCTGCCCTGAG...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CAA 72 bp GCTGGTGAGCATGCCTGTACCAGATCATGGTTGCAGTaGGTTGGGCATTTGACTGTTGCTGTTTCAAGAACC +
Preference number: 4 (lower is better)
Translates to: AGEHACTRSWLQ*VGHLTVAVSRT
Trigger: GGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCATGCTCACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCCGACACCTATCATGGTaGCACTTATGGCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFRHLSW*HLWPKP
Trigger: TGGTTTGGGCCATAAGTGTCACCATGATAGGTGTCG...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGCTCCTCTTTCGTAGATaGGAAACTCTGTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLLLFRR*ETLWSC
Trigger: ACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAG...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATC +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFRKTRS*CTSPNI
Trigger: GATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCT...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp ACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTGTGTGCAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATC +
Preference number: 4 (lower is better)
Translates to: TSNLDSSFVDEKLCGVVCRKTRS*CTSPNI
Trigger: GATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCT...GCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR TCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGAAGGCAGAGGTTCAATaGCAGCACACCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVKAEVQ*QHTSFS
Trigger: AGAAAAGGAGGTGTGCTGTCATTGAACCTCTGCCTT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTTGGGGGAATGCCCTTTaGAACCTCTGTAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIWGNAL*NLCKWG
Trigger: GCCCCACTTACAGAGGTTGCAAAGGGCATTCCCCCA...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTCTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLILCGVV*TIGIPA
Trigger: CGCGGGGATCCCTATAGTGCACACAACTCCACAGAG...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCCTCTGCTCTACACATTaGTACCAAATCCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFLCSTH*YQILPS
Trigger: GCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAG...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGAAATCTGGACTCCATTaGCTAGGACTTTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLKSGLH*LGLSYP
Trigger: AGGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTT...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTAACCAGCTTCCTCCTTaGGTTAGCAATCAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCNQLPP*VSNQSC
Trigger: GCAGCTTTGATTGCTAACCCAAGGAGGAAGCTGGTT...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGACTGAGGGGTTTGCTGTaGGGGAATGCCCTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRLRGLL*GNALCN
Trigger: GTTGCAAAGGGCATTCCCCCACAGCAAACCCCTCAG...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTATGGTTGCAGTTGGTTaGGCATTTGACTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLMVAVG*AFDCCC
Trigger: ACAGCAACAGTCAAATGCCCAACCAACTGCAACCAT...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAAGGTTTTTACTCCTaGTGCACCTCTGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFKGFYS*CTSALL
Trigger: CAGCAGGGCAGAGGTGCACCAGGAGTAAAAACCTTT...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTCACCTCCAAAACCTGTaGAGAGGGCATGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIHLQNL*RGHGSG
Trigger: TCCACTACCATGCCCTCTTCACAGGTTTTGGAGGTG...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTCTCCTCTTTCGTAGATaGGAAACTCTGTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCLLFRR*ETLWSC
Trigger: ACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAG...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR TCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTTCCCCAGCCTTCAGATaGGTCTGGATGTTACCCAAG +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLISPAFR*VWMLPK
Trigger: CTTGGGTAACATCCAGACTCATCTGAAGGCTGGGGA...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGATCCGACCACGGGCTaGAGCAGGAATCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: IQVVLDQKLLEDILRREKDPTTG*SRNPRM
Trigger: CATCCTGGGATTCCTGCTGCAGCCCGTGGTCGGATC...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAACTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCG +
Preference number: 4 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKLCGVV*TIGIPA
Trigger: CGCGGGGATCCCTATAGTGCACACAACTCCACAGAG...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTTTACACCAAACAGGCTaGACAGGACCAGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLILHQTG*TGPGWS
Trigger: ACTCCACCCTGGTCCTGTGCAGCCTGTTTGGTGTAA...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCGCACAGTGTACAGGGTaGTGGACATTACACCAAACA +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFAQCTG*WTLHQT
Trigger: TGTTTGGTGTAATGTCCAGCACCCTGTACACTGTGC...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGAAATCTGGACTCCATTaGCTAGGACTTTCCTACCCT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVKSGLH*LGLSYP
Trigger: AGGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGAGTTGGTTGGGCATTTaGCTGTTGCTGTTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVSWLGI*LLLFQE
Trigger: TTCTTGAAACAGCAACAGTCAAATGCCCAACCAACT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGGCTGGGCTGGGCTGGTaGGCATGCCTGTACCAGATC +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRAGLGW*ACLYQI
Trigger: GATCTGGTACAGGCATGCTCACCAGCCCAGCCCAGC...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCCTCACACATGGGGTCTaGCTTACTAAAATCTGGACT +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFLTHGV*LTKIWT
Trigger: AGTCCAGATTTTAGTAAGTCAGACCCCATGTGTGAG...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTATGTTTGCCAGGGGATaGGGAAAGCCACACCTCTTT +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIMFARG*GKPHLF
Trigger: AAAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACAT...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAATGGGGTCACATACGCTaGCTCCACCGCGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: IQVVLDQKLLEDILRREKWGHIR*LHRVAE
Trigger: TTCTGCTACGCGGTGGAGGCAGCGTATGTGACCCCA...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR GCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGCAAAGTGAGCACCAATaGAGAGAAGAAGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVQSEHQ*REEEHD
Trigger: GTCATGTTCTTCTTCTCTGCATTGGTGCTCACTTTG...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTCTTATTTTCCAGCTCTaGTCTACACATTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLLIFQL*STHCYQ
Trigger: TTGGTAGCAATGTGTAGAGCAGAGCTGGAAAATAAG...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATTTTTCTTCCTCGCGGTaGTACTCAGTAATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNFSSSR*YSVMRL
Trigger: TAACCTCATTACTGAGTACCACCGCGAGGAAGAAAA...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAGCCTGTACCAGATCATaGTTGCAGTTGGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRACTRS*LQLVGH
Trigger: ATGCCCAACCAACTGCAACCATGATCTGGTACAGGC...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGACTCAGGGCAGCAAAGTaGGGATTACCACCCATGATT +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRLRAAK*GLPPMI
Trigger: AATCATGGGTGGTAATCCCCACTTTGCTGCCCTGAG...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAAGAGTGGTAACACGTTaGGGCTGGAGGGAGATAGTA +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRRVVTR*GWREIV
Trigger: TACTATCTCCCTCCAGCCCCAACGTGTTACCACTCT...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAAAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATC +
Preference number: 4 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKRKTRS*CTSPNI
Trigger: GATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCT...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGACAGCAAATATCCCGTaGAGTAAAGACCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVTANIP*SKDPLI
Trigger: GATTAAAGGGTCTTTACTTCACGGGATATTTGCTGT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCTTTGCAGTTTCATGCTaGGCTGGATTAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CLYQIMVAVGWAFDCCCFFAVSC*AGLNLE
Trigger: CTCCAAGTTTAATCCAGCTCAGCATGAAACTGCAAA...GAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCAACATCCCACCTTGGTaGCAATGTTTGCCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETNIPPW*QCLPGD
Trigger: ATCCCCTGGCAAACATTGTCACCAAGGTGGGATGTT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAACTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCG +
Preference number: 4 (lower is better)
Translates to: IQVVLDQKLLEDILRREKLCGVV*TIGIPA
Trigger: CGCGGGGATCCCTATAGTGCACACAACTCCACAGAG...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR GCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTCTGCTCTACACATTaGTACCAAATCCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETLCSTH*YQILPS
Trigger: GCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAG...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATTGGGCATTTGACTGTTaGTGTTTCAAGAACCCTTAT +
Preference number: 4 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNWAFDC*CFKNPY
Trigger: ATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCA...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
3UTR CAA 72 bp GCCTGTACCAGATCATGGTTGCAGTTGGTTGGGCATTaGACTGTTGCTGTTTCAAGAACCCTTATTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ACTRSWLQLVGH*TVAVSRTLIFQ
Trigger: CTGGAAAATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGACTCACACATGGGGTCTaGCTTACTAAAATCTGGACT +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRLTHGV*LTKIWT
Trigger: AGTCCAGATTTTAGTAAGTCAGACCCCATGTGTGAG...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAAAACCAGCTTCCTCCTTaGGTTAGCAATCAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKNQLPP*VSNQSC
Trigger: GCAGCTTTGATTGCTAACCCAAGGAGGAAGCTGGTT...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp CAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACCCGCGGTACACAATCTaGCCCATGAAATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QVVLDQKLLEDILRREKDPRYTI*PMKSVK
Trigger: CTTCACAGATTTCATGGGCCAGATTGTGTACCGCGG...GTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR CCA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTATGGTTGCAGTTGGTTaGGCATTTGACTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIMVAVG*AFDCCC
Trigger: ACAGCAACAGTCAAATGCCCAACCAACTGCAACCAT...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp GTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACTTACGACACCTATCATGGTaGCACTTATGGCCCAAACCA +
Preference number: 4 (lower is better)
Translates to: VVLDQKLLEDILRREKDLRHLSW*HLWPKP
Trigger: TGGTTTGGGCCATAAGTGTCACCATGATAGGTGTCG...TAAGTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR TCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCAGAGAAGAAGAACATaGCCTGGAATTCTGTACCCA +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETQRRRT*PGILYP
Trigger: TGGGTACAGAATTCCAGGTCATGTTCTTCTTCTCTG...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR TCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAACTCCTCTTTCGTAGATaGGAAACTCTGTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKLLFRR*ETLWSC
Trigger: ACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAG...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGATTTGCAGTTTCATGCTaGGCTGGATTAAACTTGGAG +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRFAVSC*AGLNLE
Trigger: CTCCAAGTTTAATCCAGCTCAGCATGAAACTGCAAA...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGACGCTTGTTCACTAGTTaGGTTCCAAGGTTTAAATGG +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRRLFTS*VPRFKW
Trigger: CCATTTAAACCTTGGAACGCAACTAGTGAACAAGCG...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCTCCTGGTGCACCTCTaGCCTGCTGCCAGATCAAAT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRLLVHL*PAARSN
Trigger: ATTTGATCTGGCAGCAGGGCAGAGGTGCACCAGGAG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCACTGTTGCTACCCATaGCCACTGGGAGAGGAACCT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRHCCYP*PLGEEP
Trigger: AGGTTCCTCTCCCAGTGGCCATGGGTAGCAACAGTG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp GTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACTTACCGCGGTACACAATCTaGCCCATGAAATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VVLDQKLLEDILRREKDLPRYTI*PMKSVK
Trigger: CTTCACAGATTTCATGGGCCAGATTGTGTACCGCGG...TAAGTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGATTTTCTTCCTCGCGGTaGTACTCAGTAATGAGGTTA +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRFSSSR*YSVMRL
Trigger: TAACCTCATTACTGAGTACCACCGCGAGGAAGAAAA...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGGTGGTAATTTTAGAGTaGAAACACCAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVVVILE*KHQLCY
Trigger: ATAACAGAGTTGGTGTTTCCACTCTAAAATTACCAC...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp CAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACCTCCTCTTTCGTAGATaGGAAACTCTGTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: QVVLDQKLLEDILRREKDLLFRR*ETLWSC
Trigger: ACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAG...GTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCACCAGGGAGACCTATaGGGTGGTTACAGAAGACCT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRHQGDL*GGYRRP
Trigger: AGGTCTTCTGTAACCACCTCATAGGTCTCCCTGGTG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTCTGTTATAAGCACTaGATAGGCGCTTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETLCYKH*IGACSL
Trigger: TAGTGAACAAGCGCCTATGCAGTGCTTATAACAGAG...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAAAGAAGAACATGACCTaGAATTCTGTACCCAACAGT +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRKKNMT*NSVPNS
Trigger: ACTGTTGGGTACAGAATTCCAGGTCATGTTCTTCTT...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGGGGAGACCTATGAGGTaGTTACAGAAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRGRPMR*LQKTWV
Trigger: GACCCAGGTCTTCTGTAACCACCTCATAGGTCTCCC...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCACAGCAAATATCCCGTaGAGTAAAGACCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETTANIP*SKDPLI
Trigger: GATTAAAGGGTCTTTACTTCACGGGATATTTGCTGT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGATGTTTGCCAGGGGATaGGGAAAGCCACACCTCTTT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRMFARG*GKPHLF
Trigger: AAAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACAT...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGAACATGGCCATGCTGTaGATGATGAGTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRNMAML*MMSLLV
Trigger: CACCAGCAGACTCATCATGCACAGCATGGCCATGTT...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTGCATTGCCAGCTCTaGATTTACGTAACCATTTTT +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETLHCQL*IYVTIF
Trigger: AAAAATGGTTACGTAAATCCAGAGCTGGCAATGCAG...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCCGCGGTACACAATCTaGCCCATGAAATCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRPRYTI*PMKSVK
Trigger: CTTCACAGATTTCATGGGCCAGATTGTGTACCGCGG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGGCCTGTACCAGATCATaGTTGCAGTTGGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRACTRS*LQLVGH
Trigger: ATGCCCAACCAACTGCAACCATGATCTGGTACAGGC...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGAAGGCAGAGGTTCAATaGCAGCACACCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRKAEVQ*QHTSFS
Trigger: AGAAAAGGAGGTGTGCTGTCATTGAACCTCTGCCTT...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAAGCCAGAATTATAGTCTaGTGGTTATATGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKARIIV*WLYVQC
Trigger: ACACTGAACATATAACCATCAGACTATAATTCTGGC...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCGCCAGAATTATAGTCTaGTGGTTATATGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETARIIV*WLYVQC
Trigger: ACACTGAACATATAACCATCAGACTATAATTCTGGC...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CCA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAGTGGTAATTTTAGAGTaGAAACACCAACTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRVVILE*KHQLCY
Trigger: ATAACAGAGTTGGTGTTTCCACTCTAAAATTACCAC...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp GTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACTTACTTACAAGAATAAAGTaGGGAAAACACGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VVLDQKLLEDILRREKDLLTRIK*GKHGVD
Trigger: ATCAACTCCGTGTTTTCCTCACTTTATTCTTGTAAG...TAAGTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGTTAATGTCATTGCCCTaGGAGTCTGTTCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRLMSLP*ESVQHD
Trigger: ATCATGCTGAACAGACTCGCAGGGCAATGACATTAA...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCGCTTGTTCACTAGTTaGGTTCCAAGGTTTAAATGG +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRRLFTS*VPRFKW
Trigger: CCATTTAAACCTTGGAACGCAACTAGTGAACAAGCG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGCTCTGTTATAAGCACTaGATAGGCGCTTGTTCACTA +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRLCYKH*IGACSL
Trigger: TAGTGAACAAGCGCCTATGCAGTGCTTATAACAGAG...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR TCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGGAGATACTGCACAGATaGACAGTAAAACACAAAGTG +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLREILHR*TVKHKV
Trigger: CACTTTGTGTTTTACTGTTCATCTGTGCAGTATCTC...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR GCA 90 bp TGGATTAAACTTGGAGTTATCTCTGTAGCTTTTATATCATTGCTCCAGTTAAGGTGGGCATTTGACTGTTaGTGTTTCAAGAACCCTTAT +
Preference number: 4 (lower is better)
Translates to: WIKLGVISVAFISLLQLRWAFDC*CFKNPY
Trigger: ATAAGGGTTCTTGAAACAGCAACAGTCAAATGCCCA...CCTTAACTGGAGCAATGATATAAAAGCTACAGAGATAACTCCAAGTTTAATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS CCA 90 bp GGATGTAGGGTCTCCGGCGGCCCCACCTGGACCGGCAGTGGTCGCTaGCCGATCCGACCACGGGCTGCAGCAGGAATCCCAGGATGGGGC +
Preference number: 5 (lower is better)
Translates to: GCRVSGGPTWTGSGR*PIRPRAAAGIPGWG
Trigger: GCCCCATCCTGGGATTCCTGCTGCAGCCCGTGGTCGGATCGGCCAGCGACCACTGCCGGTCCAGGTGGGGCCGCCGGAGACCCTACATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000509381.1
CDS TCA 90 bp CCGGCTGTGTTGACCAGAAAGCCCAGGCCACCTCCGACCAGGATCTaGGCCAGCTGCACCATGCATGTGAGGGTGGCGCAGTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: PAVLTRKPRPPPTRI*ASCTMHVRVAQSMP
Trigger: GGGCATGGACTGCGCCACCCTCACATGCATGGTGCAGCTGGCTCAGATCCTGGTCGGAGGTGGCCTGGGCTTTCTGGTCAACACAGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS TCA 90 bp CCAGGCCACCTCCGACCAGGATCTGAGCCAGCTGCACCATGCATGTaGGGGTGGCGCAGTCCATGCCCTTCCCTCTCACGCTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: PGHLRPGSEPAAPCM*GWRSPCPSLSRCCL
Trigger: CAGACAACAGCGTGAGAGGGAAGGGCATGGACTGCGCCACCCTCACATGCATGGTGCAGCTGGCTCAGATCCTGGTCGGAGGTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS GCA 90 bp CCTGCCCACTGTTGCTACCCATGGCCACTGGGAGAGGAACCTTCCTaGGAGCCCACCACCTCCTGCGTGGTCCTAGGGTCTGTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: PAHCCYPWPLGEEPS*EPTTSCVVLGSVFQ
Trigger: TTGAAACACAGACCCTAGGACCACGCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGCAACAGTGGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296589.9
CDS GCA 90 bp GCTGCTGGGCAGACCTACGCTGAGCAGGACTGGGGTCACATACGCTaGCTCCACCGCGTAGCAGAACTCTCTTCCGAACATGGCCATGCT +
Preference number: 5 (lower is better)
Translates to: AAGQTYAEQDWGHIR*LHRVAELSSEHGHA
Trigger: AGCATGGCCATGTTCGGAAGAGAGTTCTGCTACGCGGTGGAGGCAGCGTATGTGACCCCAGTCCTGCTCAGCGTAGGTCTGCCCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000509381.1
CDS GCA 90 bp CATCAGCTAGGGATTTATAGATGTGGCGGCCAGCCTGCCCACTGTTaGTACCCATGGCCACTGGGAGAGGAACCTTCCTGCGAGCCCACC +
Preference number: 5 (lower is better)
Translates to: HQLGIYRCGGQPAHC*YPWPLGEEPSCEPT
Trigger: GGTGGGCTCGCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTGGCCGCCACATCTATAAATCCCTAGCTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
CDS GCA 90 bp CCATGGCCACTGGGAGAGGAACCTTCCTGCGAGCCCACCACCTCCTaGGTGGTCCTAGGGTCTGTGTTTCAAACTGGATTTGACGTGGAG +
Preference number: 5 (lower is better)
Translates to: PWPLGEEPSCEPTTS*VVLGSVFQTGFDVE
Trigger: CTCCACGTCAAATCCAGTTTGAAACACAGACCCTAGGACCACGCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCCCAGTGGCCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296589.9
CDS-3UTR CAA 90 bp GCACAAGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTCCAGCCTGCCCACTGTaGCTACCCATGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: AQAPTSNLDSSFVDEKLCPACPL*LPMATG
Trigger: CCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTGG...ACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS GCA 90 bp ATCCACATATCTAACAAAGAGAGCGACAAAGCAACAGCCTATCAGTaGCACCGCAGACGCTGTGATCACCACGACGACAACGGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: IHISNKESDKATAYQ*HRRRCDHHDDNGPG
Trigger: GCCGGGACCGTTGTCGTCGTGGTGATCACAGCGTCTGCGGTGGCACTGATAGGCTGTTGCTTTGTCGCTCTCTTTGTTAGATATGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS-3UTR CAA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGAGGGTCCTGAGGGGTTaGCTGTGGGGGAATGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVRVLRG*LWGNAL
Trigger: AAGGGCATTCCCCCACAGCAAACCCCTCAGGACCCT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CAA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTCCAGCCTGCCCACTGTaGCTACCCATGGCCACTGGG +
Preference number: 5 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIPACPL*LPMATG
Trigger: CCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTGG...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CAA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGGCTCTGCTCTACACATaGCTACCAAATCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLALLYT*LPNPPQ
Trigger: CTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGC...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp ACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTGTGTGCACAACAGTAGCCCCATaGAGGTACAGAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: TSNLDSSFVDEKLCGVVCTTVAP*RYRAMP
Trigger: GGGCATGGCTCTGTACCTCAATGGGGCTACTGTTGT...GCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CAA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGGAGGAAAACACGGAGTaGATGCACAAGCCCCAACAT +
Preference number: 5 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLEENTE*MHKPQH
Trigger: ATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTC...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGGCACTGCATAGGCGCTaGTTCACTAGTTGCGTTCCA +
Preference number: 5 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVALHRR*FTSCVP
Trigger: TGGAACGCAACTAGTGAACAAGCGCCTATGCAGTGC...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATAAGAGTGGTAACACGTaGGGGCTGGAGGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNKSGNT*GLEGDS
Trigger: ACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS GCA 90 bp AACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCGGTACACAATCTGGCCCATGAAATC +
Preference number: 5 (lower is better)
Translates to: NLDSSFVDEKLCGVV*TIGIPAVHNLAHEI
Trigger: GATTTCATGGGCCAGATTGTGTACCGCGGGGATCCCTATAGTGCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
ENST00000510600.1
ENST00000626082.1
ENST00000626332.2
ENST00000631255.2
ENST00000631273.1
CDS TCA 90 bp ATAGAACCATACTCGTACATTCCATCTGATGACAATGGAGGGTCCTaGGGGGTTTGCTGTGGGGGAATGCCCTTTGCAACCTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: IEPYSYIPSDDNGGS*GVCCGGMPFATSVS
Trigger: ACTTACAGAGGTTGCAAAGGGCATTCCCCCACAGCAAACCCCTCAGGACCCTCCATTGTCATCAGATGGAATGTACGAGTATGGTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000510600.1
CDS-3UTR CAA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAACAACAGTAGCCCCATaGAGGTACAGAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRTTVAP*RYRAMP
Trigger: GGGCATGGCTCTGTACCTCAATGGGGCTACTGTTGT...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATGTGACTTTAATGTCATaGCCCTGCGAGTCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNVTLMS*PCESVQ
Trigger: CTGAACAGACTCGCAGGGCAATGACATTAAAGTCAC...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000382102.7
CDS-3UTR CAA 90 bp ACATCCAACCTCGACTCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTGTGTGCGAGGAAAACACGGAGTaGATGCACAAGCCCCAACAT +
Preference number: 5 (lower is better)
Translates to: TSNLDSSFVDEKLCGVVCEENTE*MHKPQH
Trigger: ATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTC...GCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS-3UTR CAA 90 bp CAGCTCTGCTCTACACATTGCTACCAAATCCTCCCCAGCCTTCAGATGAGTCTGAGATCATGGTTGCAGTaGGTTGGGCATTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: QLCSTHCYQILPSLQMSLRSWLQ*VGHLTV
Trigger: AACAGTCAAATGCCCAACCAACTGCAACCATGATCT...CAGACTCATCTGAAGGCTGGGGAGGATTTGGTAGCAATGTGTAGAGCAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGTGTACCAGATCATGGTaGCAGTTGGTTGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVCTRSW*QLVGHL
Trigger: CAAATGCCCAACCAACTGCAACCATGATCTGGTACA...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATAAAATCTGGACTCCATaGCCTAGGACTTTCCTACCC +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNKIWTP*PRTFLP
Trigger: GGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTTT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp TTATTGTCGGTATCTAGAAATGCTGCAGGTGGCACCAGGGAGACCTATGAGGTGAAAATCTGGACTCCATaGCCTAGGACTTTCCTACCC +
Preference number: 5 (lower is better)
Translates to: LLSVSRNAAGGTRETYEVKIWTP*PRTFLP
Trigger: GGGTAGGAAAGTCCTAGGCAATGGAGTCCAGATTTT...CACCTCATAGGTCTCCCTGGTGCCACCTGCAGCATTTCTAGATACCGACAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATCAGTTGGTTGGGCATTaGACTGTTGCTGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNQLVGH*TVAVSR
Trigger: TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTG...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATAGATCATGGTTGCAGTaGGTTGGGCATTTGACTGTT +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNRSWLQ*VGHLTV
Trigger: AACAGTCAAATGCCCAACCAACTGCAACCATGATCT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp ACATCCCACCTTGGTGACAATGTTTGCCAGGGGATGAGGAAAGCCACACCTCTTAGCCACACCTCTTTTTaGAAAGGTTTTTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSHLGDNVCQGMRKATPLSHTSF*KGFYSW
Trigger: CCAGGAGTAAAAACCTTTCAAAAAAGAGGTGTGGCT...AAGAGGTGTGGCTTTCCTCATCCCCTGGCAAACATTGTCACCAAGGTGGGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTCAGCAACATCCCACCTaGGTGACAATGTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIQQHPT*VTMFAR
Trigger: CCTGGCAAACATTGTCACCAAGGTGGGATGTTGCTG...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp GCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCCTTATTAAGAGTGGTAACACGTaGGGGCTGGAGGGAGATAGT +
Preference number: 5 (lower is better)
Translates to: AKKFHYVPLKVGDRETLIKSGNT*GLEGDS
Trigger: ACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTT...AATAAGGGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATATAGGGAGACCCTTATaGTCGGTATCTAGAAATGCT +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNIGRPL*SVSRNA
Trigger: AGCATTTCTAGATACCGACAATAAGGGTCTCCCTAT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp CTGGTGCACCTCTGCCCTGCTGCCAGATCAAATGATGAAAAACATGGCCAGAATAGCCACACCTCTTTTTaGAAAGGTTTTTACTCCTGG +
Preference number: 5 (lower is better)
Translates to: LVHLCPAARSNDEKHGQNSHTSF*KGFYSW
Trigger: CCAGGAGTAAAAACCTTTCAAAAAAGAGGTGTGGCT...ATTCTGGCCATGTTTTTCATCATTTGATCTGGCAGCAGGGCAGAGGTGCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp AAACTAGTAAGAGTGGTAACACGTTGGGGCTGGAGGGAGATAGTAAATGGTAAACAGCAACATCCCACCTaGGTGACAATGTTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KLVRVVTRWGWREIVNGKQQHPT*VTMFAR
Trigger: CCTGGCAAACATTGTCACCAAGGTGGGATGTTGCTG...TTTACCATTTACTATCTCCCTCCAGCCCCAACGTGTTACCACTCTTACTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCTGTACCAGATCATGGTaGCAGTTGGTTGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETCTRSW*QLVGHL
Trigger: CAAATGCCCAACCAACTGCAACCATGATCTGGTACA...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp GTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGACTTAGAGGAAAACACGGAGTaGATGCACAAGCCCCAACAT +
Preference number: 5 (lower is better)
Translates to: VVLDQKLLEDILRREKDLEENTE*MHKPQH
Trigger: ATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTC...TAAGTCTTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000509381.1
ENST00000631273.1
CDS GCA 90 bp AGAGATACTGCACAGATGAACAGTAAAACACAAAGTGAGCACCAATaGAGAGAAGAAGAACATGACCTGGAATTCTGTACCCAACAGTCT +
Preference number: 5 (lower is better)
Translates to: RDTAQMNSKTQSEHQ*REEEHDLEFCTQQS
Trigger: AGACTGTTGGGTACAGAATTCCAGGTCATGTTCTTCTTCTCTGCATTGGTGCTCACTTTGTGTTTTACTGTTCATCTGTGCAGTATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000510600.1
CDS-3UTR CAA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCATAGGGAGACCCTTATaGTCGGTATCTAGAAATGCT +
Preference number: 5 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETIGRPL*SVSRNA
Trigger: AGCATTTCTAGATACCGACAATAAGGGTCTCCCTAT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp TGTACCAGATCATGGTTGCAGTTGGTTGGGCATTTGACTGTTGCTGTTTCAAGAATATGTTCAGTGTTTTaGCAGTTTCATGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: CTRSWLQLVGHLTVAVSRICSVF*QFHAEL
Trigger: CAGCTCAGCATGAAACTGCAAAAACACTGAACATAT...TCTTGAAACAGCAACAGTCAAATGCCCAACCAACTGCAACCATGATCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS-3UTR CAA 90 bp ATCCAAGTTGTGCTAGACCAGAAACTTTTAGAAGACATCCTTAGGAGAGAGAAAGTGACTTTAATGTCATaGCCCTGCGAGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: IQVVLDQKLLEDILRREKVTLMS*PCESVK
Trigger: CTTCACAGACTCGCAGGGCAATGACATTAAAGTCAC...TTTCTCTCTCCTAAGGATGTCTTCTAAAAGTTTCTGGTCTAGCACAACTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509381.1
CDS-3UTR CAA 90 bp AATAATGCCAAGAAATTCCACTATGTACCTCTGAAAGTTGGGGATAGGGAGACCATATGTTCAGTGTTTTaGCAGTTTCATGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: NNAKKFHYVPLKVGDRETICSVF*QFHAEL
Trigger: CAGCTCAGCATGAAACTGCAAAAACACTGAACATAT...GGTCTCCCTATCCCCAACTTTCAGAGGTACATAGTGGAATTTCTTGGCATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382102.7
ENST00000626332.2
CDS CCA 72 bp GTCTCCGGCGGCCCCACCTGGACCGGCAGTGGTCGCTaGCCGATCCGACCACGGGCTGCAGCAGGAATCCCA +
Preference number: 6 (lower is better)
Translates to: VSGGPTWTGSGR*PIRPRAAAGIP
Trigger: TGGGATTCCTGCTGCAGCCCGTGGTCGGATCGGCCAGCGACCACTGCCGGTCCAGGTGGGGCCGCCGGAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000509381.1
CDS TCA 72 bp CTCCGACCAGGATCTGAGCCAGCTGCACCATGCATGTaGGGGTGGCGCAGTCCATGCCCTTCCCTCTCACGC +
Preference number: 6 (lower is better)
Translates to: LRPGSEPAAPCM*GWRSPCPSLSR
Trigger: GCGTGAGAGGGAAGGGCATGGACTGCGCCACCCTCACATGCATGGTGCAGCTGGCTCAGATCCTGGTCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS TCA 72 bp TTGACCAGAAAGCCCAGGCCACCTCCGACCAGGATCTaGGCCAGCTGCACCATGCATGTGAGGGTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: LTRKPRPPPTRI*ASCTMHVRVAQ
Trigger: CTGCGCCACCCTCACATGCATGGTGCAGCTGGCTCAGATCCTGGTCGGAGGTGGCCTGGGCTTTCTGGTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS GCA 72 bp TGTTGCTACCCATGGCCACTGGGAGAGGAACCTTCCTaGGAGCCCACCACCTCCTGCGTGGTCCTAGGGTCT +
Preference number: 6 (lower is better)
Translates to: CCYPWPLGEEPS*EPTTSCVVLGS
Trigger: AGACCCTAGGACCACGCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000509381.1
CDS GCA 72 bp GGGATTTATAGATGTGGCGGCCAGCCTGCCCACTGTTaGTACCCATGGCCACTGGGAGAGGAACCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GIYRCGGQPAHC*YPWPLGEEPSC
Trigger: GCAGGAAGGTTCCTCTCCCAGTGGCCATGGGTAGCAACAGTGGGCAGGCTGGCCGCCACATCTATAAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
CDS GCA 72 bp CAGACCTACGCTGAGCAGGACTGGGGTCACATACGCTaGCTCCACCGCGTAGCAGAACTCTCTTCCGAACAT +
Preference number: 6 (lower is better)
Translates to: QTYAEQDWGHIR*LHRVAELSSEH
Trigger: ATGTTCGGAAGAGAGTTCTGCTACGCGGTGGAGGCAGCGTATGTGACCCCAGTCCTGCTCAGCGTAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000509381.1
CDS GCA 72 bp CTGGGAGAGGAACCTTCCTGCGAGCCCACCACCTCCTaGGTGGTCCTAGGGTCTGTGTTTCAAACTGGATTT +
Preference number: 6 (lower is better)
Translates to: LGEEPSCEPTTS*VVLGSVFQTGF
Trigger: AAATCCAGTTTGAAACACAGACCCTAGGACCACGCAGGAGGTGGTGGGCTCGCAGGAAGGTTCCTCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296589.9
CDS CAA 72 bp AGGGCACCTCCAAAACCTGCTACAACAGTAGCCCCATaGAGGTACAGAGCCATGCCCACGAGCATCATGACT +
Preference number: 6 (lower is better)
Translates to: RAPPKPATTVAP*RYRAMPTSIMT
Trigger: AGTCATGATGCTCGTGGGCATGGCTCTGTACCTCAATGGGGCTACTGTTGTAGCAGGTTTTGGAGGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505056.1
CDS TCA 72 bp TACTCGTACATTCCATCTGATGACAATGGAGGGTCCTaGGGGGTTTGCTGTGGGGGAATGCCCTTTGCAACC +
Preference number: 6 (lower is better)
Translates to: YSYIPSDDNGGS*GVCCGGMPFAT
Trigger: GGTTGCAAAGGGCATTCCCCCACAGCAAACCCCTCAGGACCCTCCATTGTCATCAGATGGAATGTACGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000510600.1
CDS GCA 72 bp TCTAACAAAGAGAGCGACAAAGCAACAGCCTATCAGTaGCACCGCAGACGCTGTGATCACCACGACGACAAC +
Preference number: 6 (lower is better)
Translates to: SNKESDKATAYQ*HRRRCDHHDDN
Trigger: GTTGTCGTCGTGGTGATCACAGCGTCTGCGGTGGCACTGATAGGCTGTTGCTTTGTCGCTCTCTTTGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296589.9
ENST00000631255.2
CDS GCA 72 bp TCCTCTTTCGTAGATGAGAAACTCTGTGGAGTTGTGTaGACTATAGGGATCCCCGCGGTACACAATCTGGCC +
Preference number: 6 (lower is better)
Translates to: SSFVDEKLCGVV*TIGIPAVHNLA
Trigger: GGCCAGATTGTGTACCGCGGGGATCCCTATAGTGCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
ENST00000510600.1
ENST00000626082.1
ENST00000626332.2
ENST00000631255.2
ENST00000631273.1
CDS CCA 72 bp CATGGTGACACTTATGGCCCAAACCAGCTTCCTCCTTaGGTTAGCAATCAAAGCTGCTACAACAGTAGCCCC +
Preference number: 6 (lower is better)
Translates to: HGDTYGPNQLPP*VSNQSCYNSSP
Trigger: GGGGCTACTGTTGTAGCAGCTTTGATTGCTAACCCAAGGAGGAAGCTGGTTTGGGCCATAAGTGTCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
CDS CAA 72 bp GGGTTAGCAATCAAAGCTGCTACAACAGTAGCCCCATaGAGGTACAGAGCCATGCCCACGAGCATCATGACT +
Preference number: 6 (lower is better)
Translates to: GLAIKAATTVAP*RYRAMPTSIMT
Trigger: AGTCATGATGCTCGTGGGCATGGCTCTGTACCTCAATGGGGCTACTGTTGTAGCAGCTTTGATTGCTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
CDS TCA 72 bp CGGCAGCAAAATCAAAGAGAACGACACCTATCATGGTaGCACTTATGGCCCAAACCAGCTTCCTCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: RQQNQRERHLSW*HLWPKPASSLG
Trigger: ACCCAAGGAGGAAGCTGGTTTGGGCCATAAGTGTCACCATGATAGGTGTCGTTCTCTTTGATTTTGCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
CDS TCA 72 bp AGCCCCAACATCCAACCTCGACTCCTCTTTCGTAGATaGGAAACTCTGTGGAGTTGTGTGCACTATAGGGAT +
Preference number: 6 (lower is better)
Translates to: SPNIQPRLLFRR*ETLWSCVHYRD
Trigger: ATCCCTATAGTGCACACAACTCCACAGAGTTTCTCATCTACGAAAGAGGAGTCGAGGTTGGATGTTGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000509381.1
ENST00000510600.1
ENST00000626082.1
ENST00000626332.2
ENST00000631255.2
ENST00000631273.1
CDS CCA 72 bp TTGCTGTGGGGGAATGCCCTTTGCAACCTCTGTAAGTaGGGCTTCAGAGATACTGCACAGATGAACAGTAAA +
Preference number: 6 (lower is better)
Translates to: LLWGNALCNLCK*GFRDTAQMNSK
Trigger: TTTACTGTTCATCTGTGCAGTATCTCTGAAGCCCCACTTACAGAGGTTGCAAAGGGCATTCCCCCACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000510600.1
CDS TCA 72 bp TCTGAAAGTAAGAATAAAGTGAGGAAAACACGGAGTTaGTGCACAAGCCCCAACATCCAACCTCGACTCCTC +
Preference number: 6 (lower is better)
Translates to: SESKNKVRKTRS*CTSPNIQPRLL
Trigger: GAGGAGTCGAGGTTGGATGTTGGGGCTTGTGCATCAACTCCGTGTTTTCCTCACTTTATTCTTACTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000510600.1
ENST00000626082.1
ENST00000626332.2
ENST00000631255.2
CDS GCA 72 bp GCACAGATGAACAGTAAAACACAAAGTGAGCACCAATaGAGAGAAGAAGAACATGACCTGGAATTCTGTACC +
Preference number: 6 (lower is better)
Translates to: AQMNSKTQSEHQ*REEEHDLEFCT
Trigger: GGTACAGAATTCCAGGTCATGTTCTTCTTCTCTGCATTGGTGCTCACTTTGTGTTTTACTGTTCATCTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000505056.1
ENST00000510600.1
CDS CAA 72 bp TGTTCACCAGTGCTCTCAGCAGTGACTTTAATGTCATaGCCCTGCGAGTCTGTTCAGCATGATTTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: CSPVLSAVTLMS*PCESVQHDFCF
Trigger: AAAACAAAAATCATGCTGAACAGACTCGCAGGGCAATGACATTAAAGTCACTGCTGAGAGCACTGGTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296589.9
ENST00000382102.7
ENST00000510600.1