RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC45A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162426

Ensembl transcript IDs: ENST00000289877.8, ENST00000471889.7, ENST00000481265.1, ENST00000497660.5

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTaGTCCAGACCCCCAGGTGCAGGCGCGTGTCCGGAG +
Preference number: 3 (lower is better)
Translates to: CPTRPFGPHWSA*SRPPGAGACPE
Trigger: CTCCGGACACGCGCCTGCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
3UTR CCA 72 bp AGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTaGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGG +
Preference number: 3 (lower is better)
Translates to: SRQPVPLSNKAL*SSLVGLLQTPR
Trigger: CCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCCATGCCCCGCCGGGTaGCGTCCGCACTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACPCPAG*RPHWTL
Trigger: CAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCCCACGGACAGAGGCTaGTCCGCGCGCTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACPTDRG*SARSLE
Trigger: CTCCAGCGAGCGCGCGGAGCAGCCTCTGTCCGTGGG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCAGATGTCCACGCCCATaGCCCGCCGGGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPRCPRP*PAGCRP
Trigger: CGGACGGCACCCGGCGGGGCATGGGCGTGGACATCT...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCCTCCCGGCGGGGTGCTaGTGGCTGCGGGGATCATCG +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSALPAGC*WLRGSS
Trigger: CGATGATCCCCGCAGCCAGCAGCACCCCGCCGGGAG...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471889.7
CDS-3UTR CCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCCTGTGGGGCCACGCTaGGGAAGAGGGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACPVGPR*GRGHLP
Trigger: CGGGAGATGCCCTCTTCCCCAGCGTGGCCCCACAGG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTCTGGCAGGACGGGTaGGGACGGGGGCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SRQPVPLSNKALWSSLVGLWQDG*GRGQRE
Trigger: CTCCCGCTGCCCCCGTCCCCACCCGTCCTGCCAGAG...GCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCGCCAGGGCCTTCCTCTaGCAGGACGGGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAARAFL*QDGWGR
Trigger: CCGTCCCCACCCGTCCTGCCAGAGGAAGGCCCTGGC...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCGCCTTGGGGTCCCCCTaGAACACCACCTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPALGSP*NTTSPM
Trigger: CATGGGCGAGGTGGTGTTTCAGGGGGACCCCAAGGC...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGACCCCCTCCTCCGGCTaGGTCCGGGATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQTPSSG*VRDGQG
Trigger: ACCTTGGCCATCCCGGACGCAGCCGGAGGAGGGGGT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCTCACCCCGTTGGCACTaGCCACGGCCGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLSPRWH*PRPRSG
Trigger: CCCTGACCTCGGCCGTGGGCAGTGCCAACGGGGTGA...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCCTCCAGACCCCCAGGTaGAGGCGCGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCLQTPR*RRVSGV
Trigger: GACTCCGGACACGCGCCTGCACCTGGGGGTCTGGAG...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAGGGGCAGCGGGAGGCTaGGGCTCTTCATGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRGAAGG*GSSWLP
Trigger: GGGCAGCCATGAAGAGCCCCAGCCTCCCGCTGCCCC...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCGGTTCCTGGAGAGGGTaGCAAGCCCGGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLGSWRG*QARSPG
Trigger: GCCTGGGGACCGGGCTTGCCACCCTCTCCAGGAACC...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCCTGCGGGGATCATCGTaGGGAGGGCTGGTGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSALRGSS*GGLVGV
Trigger: GACGCCCACCAGCCCTCCCCACGATGATCCCCGCAG...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471889.7
CDS-3UTR CCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTCCGGCGGGGTGCTGCTaGCTGCGGGGATCATCGTGG +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGPAGCC*LRGSSW
Trigger: CCACGATGATCCCCGCAGCCAGCAGCACCCCGCCGG...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471889.7
CDS-3UTR TCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCACCCCGAGTAGCCCGTaGCCTGGGACCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPTPSSP*PGTSRS
Trigger: ACTTCTGGAGGTCCCAGGTCACGGGCTACTCGGGGT...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCACCCCGAGTAGCCCGTaGCCTGGGACCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACTPSSP*PGTSRS
Trigger: ACTTCTGGAGGTCCCAGGTCACGGGCTACTCGGGGT...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCGCCTCTCAGGGATGCTaGCCAGGGTCAGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCASQGC*PGSGRW
Trigger: CCACCGTCCTGACCCTGGTCAGCATCCCTGAGAGGC...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGCCTCGGTCCTGGTCTaGGGGGCTGCACACGTCCAT +
Preference number: 4 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPASVLV*GAAHVH
Trigger: ATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGC...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCATGTAGGCGTGGCTaGGGTTGTCCGCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSCRRG*GCPPSR
Trigger: CCGACTCGGCGGACAACCCCAGCCACGCCTACATGA...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGTTCAGGCCTCGGTCCTaGTCTGCGGGGCTGCACACG +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQFRPRS*SAGLHT
Trigger: CGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAA...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGCCTGCCAGGAGGGCGTaGATGTTCAGGCCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQPARRA*MFRPRS
Trigger: GGACCGAGGCCTGAACATCCACGCCCTCCTGGCAGG...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCGGCTGGAGAAGTTGGTaGCCGTGTGCGACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLGWRSW*PCATGG
Trigger: GCCTCCCGTCGCACACGGCCACCAACTTCTCCAGCC...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTGGCTGGAGAAGTTGGTaGCCGTGTGCGACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAGWRSW*PCATGG
Trigger: GCCTCCCGTCGCACACGGCCACCAACTTCTCCAGCC...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCGCGGCGAGATGGGGCTaGAGAAGTTGGTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACAARWG*RSWWPC
Trigger: ACACGGCCACCAACTTCTCCAGCCCCATCTCGCCGC...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTGGACGCTGCCAGGGATaGCCAGGTAGCTGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAGRCQG*PGSCRG
Trigger: GCCACGACAGCTACCTGGCCATCCCTGGCAGCGTCC...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAGGTTCCTGGAGAGGGTaGCAAGCCCGGTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRGSWRG*QARSPG
Trigger: GCCTGGGGACCGGGCTTGCCACCCTCTCCAGGAACC...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCCCTTTGGTCCTCACTaGTCGGCCTGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPPFGPH*SACSRP
Trigger: GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGG...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCTGTTGGCCCGGTGACTaGGGTGTCGTGTCACGGACC +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCCWPGD*GVVSRT
Trigger: GGTCCGTGACACGACACCTCAGTCACCGGGCCAACA...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGGCCGTGCCAAAGGATaGGGCGAACTCGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQGRAKG*GELADA
Trigger: GGCATCAGCGAGTTCGCCTCATCCTTTGGCACGGCC...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCAGGAAGTGGTTaGCGCAGAGGGTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQTPGSG*RRGCVA
Trigger: CGCTACGCACCCTCTGCGTCAACCACTTCCTGGGGT...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCACCCCAGGAAGTGGTTaGCGCAGAGGGTGCGTAGCG +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLTPGSG*RRGCVA
Trigger: CGCTACGCACCCTCTGCGTCAACCACTTCCTGGGGT...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCCTTGGGGTCCCCCTaGAACACCACCTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGALGSP*NTTSPM
Trigger: CATGGGCGAGGTGGTGTTTCAGGGGGACCCCAAGGC...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGAAGGACCTCTGGGGGTaGAGGTCCCCGAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQKDLWG*RSPKST
Trigger: GGTGGACTTCGGGGACCTGCACCCCCAGAGGTCCTT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCGTCAGCCAGGGCGATaGCAATGTCCCGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACRQPGR*QCPGHS
Trigger: TGAATGGCCGGGACATTGGCATCGCCCTGGCTGACG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAGCCTCGGTCCTGGTCTaGGGGGCTGCACACGTCCAT +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRASVLV*GAAHVH
Trigger: ATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGC...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGGCCTCCTCCGAGACCTaGCAGGAGGGCGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQASSET*QEGVDV
Trigger: AACATCCACGCCCTCCTGGCAGGTCTCGGAGGAGGC...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGCCTCCTCCGAGACCTaGCAGGAGGGCGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPASSET*QEGVDV
Trigger: AACATCCACGCCCTCCTGGCAGGTCTCGGAGGAGGC...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCAAGTTGGTGGCCGTGTaGGACGGGAGGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAKLVAV*DGRLSP
Trigger: TGGCGACAGCCTCCCGTCGCACACGGCCACCAACTT...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCAGGGCACCCTCTCTaGCCTCCAGAAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSGHPL*PPEVHG
Trigger: ACCGTGGACTTCTGGAGGGCAGAGAGGGTGCCCTGA...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGCCCACGGACAGAGGCTaGTCCGCGCGCTCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWPTDRG*SARSLE
Trigger: CTCCAGCGAGCGCGCGGAGCAGCCTCTGTCCGTGGG...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGATACGCCTCTGATGTGTaGGGGGCCTTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRYASDV*GALGSP
Trigger: GGGGGACCCCAAGGCCCCGCACACATCAGAGGCGTA...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCGGTGCTCCTCGTCTaGAGCGTCGCTGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLPVLLV*SVAGRN
Trigger: ATTCCTCCCAGCGACGCTGCAGACGAGGAGCACCGG...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGCCGGTGCTCCTCGTCTaGAGCGTCGCTGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQPVLLV*SVAGRN
Trigger: ATTCCTCCCAGCGACGCTGCAGACGAGGAGCACCGG...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCCCTCCAGAAGTCCTGTaGGGCCACGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAPPEVL*GHAGEE
Trigger: CTCTTCCCCAGCGTGGCCCCACAGGACTTCTGGAGG...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCAGCAGGCCCCACTTGTaGTTCCCGGTCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSASRPHL*FPVTSA
Trigger: GGCTGACGTGACCGGGAACCACAAGTGGGGCCTGCT...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTTCATGTAGGCGTGGCTaGGGTTGTCCGCCGAGTCGG +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPASCRRG*GCPPSR
Trigger: CCGACTCGGCGGACAACCCCAGCCACGCCTACATGA...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCCTGCCAGGAGGGCGTaGATGTTCAGGCCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SRQPVPLSNKALWSSLVGPARRA*MFRPRS
Trigger: GGACCGAGGCCTGAACATCCACGCCCTCCTGGCAGG...GCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGTGGGGCTGGAGAAGTTaGTGGCCGTGTGCGACGGGA +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLWGWRS*WPCATG
Trigger: TCCCGTCGCACACGGCCACCAACTTCTCCAGCCCCA...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCTGGGGCTGGAGAAGTTaGTGGCCGTGTGCGACGGGA +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCWGWRS*WPCATG
Trigger: TCCCGTCGCACACGGCCACCAACTTCTCCAGCCCCA...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGCTCCGCGCGCTCGCTaGAGCCCGTCAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLAPRAR*SPSARS
Trigger: AGAGCGAGCTGACGGGCTCCAGCGAGCGCGCGGAGC...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGCATGTTGCAGATGGTaGAGCAGAGGCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQACCRW*SRGAPR
Trigger: CCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGC...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCGCATGTTGCAGATGGTaGAGCAGAGGCGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAACCRW*SRGAPR
Trigger: CCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGC...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCGGGTGCGTAGCGCCTTaGGCATGTTGCAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPGCVAP*ACCRWW
Trigger: CCACCATCTGCAACATGCCCAAGGCGCTACGCACCC...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCAGCCACCCCAGGAAGTaGTTGACGCAGAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPSHPRK*LTQRVR
Trigger: ACGCACCCTCTGCGTCAACCACTTCCTGGGGTGGCT...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCACGTAGAGGTTCCTaGAGAGGGTGGCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAPRRGS*RGWQAR
Trigger: CCGGGCTTGCCACCCTCTCCAGGAACCTCTACGTGG...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCAGTACATCACCCCGTTaGCACTGCCCACGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCSTSPR*HCPRPR
Trigger: CCTCGGCCGTGGGCAGTGCCAACGGGGTGATGTACT...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTTGTTGGCCCGGTGACTaGGGTGTCGTGTCACGGACC +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGCWPGD*GVVSRT
Trigger: GGTCCGTGACACGACACCTCAGTCACCGGGCCAACA...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTTCTGATACGCCTCTaGTGTGTGCGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLLLIRL*CVRGLG
Trigger: CCCAAGGCCCCGCACACATCAGAGGCGTATCAGAAG...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCTTCTGATACGCCTCTaGTGTGTGCGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPALLIRL*CVRGLG
Trigger: CCCAAGGCCCCGCACACATCAGAGGCGTATCAGAAG...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCAGAGGGTGCGGACGCTaGGGAACTCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCRGCGR*GTPPAS
Trigger: AGAAGCTGGAGGAGTTCCTCAGCGTCCGCACCCTCT...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAGGCGAGATAGGCGATaGAGTAGAGGGTGCGGACGC +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQRRDRR*SRGCGR
Trigger: GCGTCCGCACCCTCTACTTCATCGCCTATCTCGCCT...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCAGGCGAGATAGGCGATaGAGTAGAGGGTGCGGACGC +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLRRDRR*SRGCGR
Trigger: GCGTCCGCACCCTCTACTTCATCGCCTATCTCGCCT...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGTCGGGCAGGCCCATCTaGAGGAGCACCGGGGTCACG +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLSGRPI*RSTGVT
Trigger: CGTGACCCCGGTGCTCCTGCAGATGGGCCTGCCCGA...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGCCTGGTCTGCGGGGCTaGACACGTCCATCATGTAGG +
Preference number: 4 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQPGLRG*TRPSCR
Trigger: CCTACATGATGGACGTGTGCAGCCCCGCAGACCAGG...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGAGCAGGAGGGGCCGGTaGTCCTCGTCTGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLSRRGR*SSSAAS
Trigger: CGACGCTGCAGACGAGGAGCACCGGCCCCTCCTGCT...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAGGCTGGGGCTCTTCATaGCTGCCCGCTTCTCACTCG +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRGWGSS*LPASHS
Trigger: CGAGTGAGAAGCGGGCAGCCATGAAGAGCCCCAGCC...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCGGCGAGATGGGGCTaGAGAAGTTGGTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGAARWG*RSWWPC
Trigger: ACACGGCCACCAACTTCTCCAGCCCCATCTCGCCGC...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCTGGGCATGTTGCAGATaGTGGAGCAGAGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPWACCR*WSRGAP
Trigger: TGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCA...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCGGGTGCGTAGCGCCTTaGGCATGTTGCAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPGCVAP*ACCRWW
Trigger: CCACCATCTGCAACATGCCCAAGGCGCTACGCACCC...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGATGTGTGCGGGGCCTTaGGGTCCCCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQMCAGP*GPPETP
Trigger: TGGTGTTTCAGGGGGACCCCAAGGCCCCGCACACAT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCATGTGTGCGGGGCCTTaGGGTCCCCCTGAAACACCA +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAMCAGP*GPPETP
Trigger: TGGTGTTTCAGGGGGACCCCAAGGCCCCGCACACAT...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGTGCCCCAGCAGCCCATaGTCACGCCGCTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLCPSSP*SRRCCT
Trigger: AGTACAACAGCGGCGTGACCATGGGCTGCTGGGGCA...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTCCACGTAGAGGTTCCTaGAGAGGGTGGCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGPRRGS*RGWQAR
Trigger: CCGGGCTTGCCACCCTCTCCAGGAACCTCTACGTGG...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAAGTACATCACCCCGTTaGCACTGCCCACGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRSTSPR*HCPRPR
Trigger: CCTCGGCCGTGGGCAGTGCCAACGGGGTGATGTACT...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAACAAGGCCCTTTaGTCCTCACTGGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSNKAL*SSLVGL
Trigger: CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGAAGTTGTTGGCCCGGTaGCTGAGGTGTCGTGTCACG +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQKLLAR*LRCRVT
Trigger: CGTGACACGACACCTCAGTCACCGGGCCAACAACTT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGGCCTCTCAGGGATGCTaGCCAGGGTCAGGACGGTGG +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWASQGC*PGSGRW
Trigger: CCACCGTCCTGACCCTGGTCAGCATCCCTGAGAGGC...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGCAACATCCCCTCGAATaGGAGCCACCCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQQHPLE*EPPQEV
Trigger: CACTTCCTGGGGTGGCTCTCATTCGAGGGGATGTTG...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAAGAGGGTGCGGACGCTaGGGAACTCCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRRGCGR*GTPPAS
Trigger: AGAAGCTGGAGGAGTTCCTCAGCGTCCGCACCCTCT...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGGGGCTCTTCATGGCTaGCCGCTTCTCACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLGALHG*PLLTRR
Trigger: CCGCCGAGTGAGAAGCGGGCAGCCATGAAGAGCCCC...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACACCCCCTCCTCCGGCTaGGTCCGGGATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHTPSSG*VRDGQG
Trigger: ACCTTGGCCATCCCGGACGCAGCCGGAGGAGGGGGT...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCACATTCCTTCTCCTaGTGGTTTCGGGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSHSFS*WFRDPL
Trigger: GAGGGGGTCCCGAAACCAGCAGGAGAAGGAATGTGA...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCCATGCCCCGCCGGGTaGCGTCCGCACTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPPCPAG*RPHWTL
Trigger: CAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGG...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAAGATGTCCACGCCCATaGCCCGCCGGGTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSRCPRP*PAGCRP
Trigger: CGGACGGCACCCGGCGGGGCATGGGCGTGGACATCT...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCCATTCCTTCTCCTGCTaGTTTCGGGACCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCHSFSC*FRDPLL
Trigger: GAGGAGGGGGTCCCGAAACCAGCAGGAGAAGGAATG...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCATTCCTTCTCCTGCTaGTTTCGGGACCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLHSFSC*FRDPLL
Trigger: GAGGAGGGGGTCCCGAAACCAGCAGGAGAAGGAATG...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAGCTCCGCGCGCTCGCTaGAGCCCGTCAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSAPRAR*SPSARS
Trigger: AGAGCGAGCTGACGGGCTCCAGCGAGCGCGCGGAGC...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGGGTGCCGTCCGCACTaGACCCTGCAAACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQGCRPH*TLQTSY
Trigger: GTAAGAAGTTTGCAGGGTCCAGTGCGGACGGCACCC...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCGGGTGCCGTCCGCACTaGACCCTGCAAACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCGCRPH*TLQTSY
Trigger: GTAAGAAGTTTGCAGGGTCCAGTGCGGACGGCACCC...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCTCCAACAAGGCCCTTTaGTCCTCACTGGTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCSNKAL*SSLVGL
Trigger: CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGTGGTGGGCGTCCCTGTaGGTGGAGACGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLWWASL*VETAGI
Trigger: GATGCCTGCCGTCTCCACCCACAGGGACGCCCACCA...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471889.7
CDS-3UTR TCA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCTCTTGGGGTGTCGTTTaGAGTTGTTGGCCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPSWGVV*SCWPGD
Trigger: GTCACCGGGCCAACAACTTCAAACGACACCCCAAGA...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTGGGATGGCCAAGGTCTaGGGTCTCTTCAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAGMAKV*GLFRIP
Trigger: AGGGATTCTGAAGAGACCTCAGACCTTGGCCATCCC...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCCGCTGTTGTACTTCTaGTACGCCTCTGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACPLLYF*YASDVC
Trigger: GCACACATCAGAGGCGTATCAGAAGTACAACAGCGG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAAGGGAGACCAGAATCTaGGCCAGGAAGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPRETRI*ARKYWQ
Trigger: CTGCCAGTACTTCCTGGCTCAGATTCTGGTCTCCCT...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCAGGCGTAGATACACATaGCCCAGCAGCCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLRRRYT*PSSPWS
Trigger: TGACCATGGGCTGCTGGGGCATGTGTATCTACGCCT...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAAGCAGGAGGGGCCGGTaGTCCTCGTCTGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSSRRGR*SSSAAS
Trigger: CGACGCTGCAGACGAGGAGCACCGGCCCCTCCTGCT...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGCCTCCAGAAGTCCTGTaGGGCCACGCTGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWPPEVL*GHAGEE
Trigger: CTCTTCCCCAGCGTGGCCCCACAGGACTTCTGGAGG...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGGGCTGGGGCTCTTCATaGCTGCCCGCTTCTCACTCG +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWGWGSS*LPASHS
Trigger: CGAGTGAGAAGCGGGCAGCCATGAAGAGCCCCAGCC...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACGGACGCTGCCAGGGATaGCCAGGTAGCTGTCGTGGC +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHGRCQG*PGSCRG
Trigger: GCCACGACAGCTACCTGGCCATCCCTGGCAGCGTCC...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGCGGCTGCGTCCGGGATaGCCAAGGTCTGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWRLRPG*PRSEVS
Trigger: AGAGACCTCAGACCTTGGCCATCCCGGACGCAGCCG...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGGGAAGGACACGAGGCTaGAGAAGTACATCACCCCGT +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLGRTRG*RSTSPR
Trigger: ACGGGGTGATGTACTTCTCCAGCCTCGTGTCCTTCC...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp AGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCTCTTGGGGTGTCGTTTaGAGTTGTTGGCCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRQPVPLSNKALWSSLVGSWGVV*SCWPGD
Trigger: GTCACCGGGCCAACAACTTCAAACGACACCCCAAGA...GCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAAGAGAATGCAGCCGTTaGAAAGCAGCTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRRECSR*KAAPGR
Trigger: CCTTCCGGGAGCTGCTTTTCAACGGCTGCATTCTCT...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTAGAGAATGCAGCCGTTaGAAAGCAGCTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CPTRPFGPHWSACSRPPGRECSR*KAAPGR
Trigger: CCTTCCGGGAGCTGCTTTTCAACGGCTGCATTCTCT...ACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGTCTCCTTCCAAACCTTaGGGTACACCGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQSPSKP*GTPVTP
Trigger: TGGAGTGACCGGTGTACCTCAAGGTTTGGAAGGAGA...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCACACCACCTCGCCCATaGAGTCTGTGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSATPPRP*SLCRRA
Trigger: TGCTCTTCTACACAGACTTCATGGGCGAGGTGGTGT...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCGCTGTTGTACTTCTaGTACGCCTCTGATGTGTGC +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAPLLYF*YASDVC
Trigger: GCACACATCAGAGGCGTATCAGAAGTACAACAGCGG...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCAGTAGAAGGCAGCACTaGAGGCGTAGATACACATGC +
Preference number: 4 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSRRQH*RRRYTC
Trigger: GCATGTGTATCTACGCCTTCAGTGCTGCCTTCTACT...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGAAGGGAGACCAGAATCTaGGCCAGGAAGTACTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRRETRI*ARKYWQ
Trigger: CTGCCAGTACTTCCTGGCTCAGATTCTGGTCTCCCT...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGCCTGGTCTGCGGGGCTaGACACGTCCATCATGTAGG +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWPGLRG*TRPSCR
Trigger: CCTACATGATGGACGTGTGCAGCCCCGCAGACCAGG...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCTGTCTATGTTGGCCGTaGCAAAGGATGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: PPVQQGPLVLTGRPAPDPCLCWP*QRMRRT
Trigger: AGTTCGCCTCATCCTTTGGCACGGCCAACATAGACA...GGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACCTCACTGGTCGGCCTaGTCCAGACCCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSPHWSA*SRPPGA
Trigger: TGCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGG...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCATTCAGGCCTCGGTCCTaGTCTGCGGGGCTGCACACG +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSFRPRS*SAGLHT
Trigger: CGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAA...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCCGTTTTATCCCAGTaGATTCCGCCGACCACGTAT +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLPVLSQ*IPPTTY
Trigger: ATACGTGGTCGGCGGAATCCACTGGGATAAAACGGG...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTCTCTGGCAGGACGGGTaGGGACGGGGGCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALLWQDG*GRGQRE
Trigger: CTCCCGCTGCCCCCGTCCCCACCCGTCCTGCCAGAG...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACCCCTTTGGTCCTCACTaGTCGGCCTGCTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHPFGPH*SACSRP
Trigger: GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGG...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCTCTCCATGGCGTAGCTaGACTCGATGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPSPWRS*TRCQRE
Trigger: TTCTCTTTGGCATCGAGTTCAGCTACGCCATGGAGA...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACATGAGGCGAACTCGCTaGTGCCCGTCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHMRRTR*CPSGSC
Trigger: ACAGCTCCCTGACGGGCATCAGCGAGTTCGCCTCAT...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACATACTTCACGCCGTTaGGCAGGATATTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QSPCPTRPFGPHWSACSRHTSRR*AGYWPP
Trigger: AGGTGGCCAATATCCTGCTCAACGGCGTGAAGTATG...TCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGCTTCTCCAGGATAGCTaGGTAGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQLLQDS*VEGSTE
Trigger: TTCAGTGCTGCCTTCTACTCAGCTATCCTGGAGAAG...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAAAGGACCTCTGGGGGTaGAGGTCCCCGAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSKDLWG*RSPKST
Trigger: GGTGGACTTCGGGGACCTGCACCCCCAGAGGTCCTT...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCTGTCTATGTTGGCCGTaGCAAAGGATGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCCLCWP*QRMRRT
Trigger: AGTTCGCCTCATCCTTTGGCACGGCCAACATAGACA...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTAAATCCCGTAGGTTATaGAGAGCGACAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAKSRRL*RATGPR
Trigger: ACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTT...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGCCAGGGCCTTCCTCTaGCAGGACGGGTGGGGACGG +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFARAFL*QDGWGR
Trigger: CCGTCCCCACCCGTCCTGCCAGAGGAAGGCCCTGGC...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACGGCTGCGTCCGGGATaGCCAAGGTCTGAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSRLRPG*PRSEVS
Trigger: AGAGACCTCAGACCTTGGCCATCCCGGACGCAGCCG...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGCCCCAGCAGCCCATaGTCACGCCGCTGTTGTACT +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHCPSSP*SRRCCT
Trigger: AGTACAACAGCGGCGTGACCATGGGCTGCTGGGGCA...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTGGCCGTGCCAAAGGATaGGGCGAACTCGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPGRAKG*GELADA
Trigger: GGCATCAGCGAGTTCGCCTCATCCTTTGGCACGGCC...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGGGATGGCCAAGGTCTaGGGTCTCTTCAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLGMAKV*GLFRIP
Trigger: AGGGATTCTGAAGAGACCTCAGACCTTGGCCATCCC...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACGTGGGGAGGGACGAATaGACTTCCTCCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHVGRDE*TSSSWG
Trigger: ACCCCAAGAGGAGGAAGTGCATTCGTCCCTCCCCAC...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTAAGTTGGTGGCCGTGTaGGACGGGAGGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPKLVAV*DGRLSP
Trigger: TGGCGACAGCCTCCCGTCGCACACGGCCACCAACTT...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCATCAGGGCACCCTCTCTaGCCTCCAGAAGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSSGHPL*PPEVHG
Trigger: ACCGTGGACTTCTGGAGGGCAGAGAGGGTGCCCTGA...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp GCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTGTCCGCACTGGACCCTaGAAACTTCTTACTCTGATA +
Preference number: 4 (lower is better)
Translates to: AASPPVQQGPLVLTGRPAVRTGP*KLLTLI
Trigger: TATCAGAGTAAGAAGTTTGCAGGGTCCAGTGCGGAC...AGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTCACCCCGTTGGCACTaGCCACGGCCGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALSPRWH*PRPRSG
Trigger: CCCTGACCTCGGCCGTGGGCAGTGCCAACGGGGTGA...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTCCTGTGGGGCCACGCTaGGGAAGAGGGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFPVGPR*GRGHLP
Trigger: CGGGAGATGCCCTCTTCCCCAGCGTGGCCCCACAGG...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAAGCCACCCCAGGAAGTaGTTGACGCAGAGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSSHPRK*LTQRVR
Trigger: ACGCACCCTCTGCGTCAACCACTTCCTGGGGTGGCT...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGACACCACCTCGCCCATaGAGTCTGTGTAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IPVGSQSPCPTRPFGPHWTPPRP*SLCRRA
Trigger: TGCTCTTCTACACAGACTTCATGGGCGAGGTGGTGT...CCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGGGCTCTTCATGGCTaGCCGCTTCTCACTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFGALHG*PLLTRR
Trigger: CCGCCGAGTGAGAAGCGGGCAGCCATGAAGAGCCCC...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTACGCCTCTGATGTGTaGGGGGCCTTGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALYASDV*GALGSP
Trigger: GGGGGACCCCAAGGCCCCGCACACATCAGAGGCGTA...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TTTATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTCCAGACCCCCAGGTaGAGGCGCGTGTCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: FITYLHSSRQPVPLSNKALQTPR*RRVSGV
Trigger: GACTCCGGACACGCGCCTGCACCTGGGGGTCTGGAG...GGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTCCTCACTGGTCGGCCTaGTCCAGACCCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALPHWSA*SRPPGA
Trigger: TGCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGG...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTTGGGCATGTTGCAGATaGTGGAGCAGAGGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPWACCR*WSRGAP
Trigger: TGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCA...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGCTTCTCCAGGATAGCTaGGTAGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLLLQDS*VEGSTE
Trigger: TTCAGTGCTGCCTTCTACTCAGCTATCCTGGAGAAG...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGAAATCCCGTAGGTTATaGAGAGCGACAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLKSRRL*RATGPR
Trigger: ACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTT...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCATCTCCTTCCAAACCTTaGGGTACACCGGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSSPSKP*GTPVTP
Trigger: TGGAGTGACCGGTGTACCTCAAGGTTTGGAAGGAGA...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTATGAGGCGAACTCGCTaGTGCCCGTCAGGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALMRRTR*CPSGSC
Trigger: ACAGCTCCCTGACGGGCATCAGCGAGTTCGCCTCAT...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGATATTGGCCACCTGCTaGCTGAAGGTCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLILATC*LKVTFL
Trigger: AAGGAATGTGACCTTCAGTCAGCAGGTGGCCAATAT...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGGAGGAATTTCATAAATaGCAAACAGGGAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLEEFHK*QTGRST
Trigger: TGTACTCCTCCCTGTTTGTCATTTATGAAATTCCTC...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp CAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCGAGGAATTTCATAAATaGCAAACAGGGAGGAGTACA +
Preference number: 4 (lower is better)
Translates to: QPVPLSNKALWSSLVGLLEEFHK*QTGRST
Trigger: TGTACTCCTCCCTGTTTGTCATTTATGAAATTCCTC...GAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTCGTCAGCCAGGGCGATaGCAATGTCCCGGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFRQPGR*QCPGHS
Trigger: TGAATGGCCGGGACATTGGCATCGCCCTGGCTGACG...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTTCACATTCCTTCTCCTaGTGGTTTCGGGACCCCCTC +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPSHSFS*WFRDPL
Trigger: GAGGGGGTCCCGAAACCAGCAGGAGAAGGAATGTGA...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCATACTTCACGCCGTTaGGCAGGATATTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPHTSRR*AGYWPP
Trigger: AGGTGGCCAATATCCTGCTCAACGGCGTGAAGTATG...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTCAACATCCCCTCGAATaGGAGCCACCCCAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFQHPLE*EPPQEV
Trigger: CACTTCCTGGGGTGGCTCTCATTCGAGGGGATGTTG...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGTGGGGAGGGACGAATaGACTTCCTCCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFVGRDE*TSSSWG
Trigger: ACCCCAAGAGGAGGAAGTGCATTCGTCCCTCCCCAC...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTTCTCCATGGCGTAGCTaGACTCGATGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPSPWRS*TRCQRE
Trigger: TTCTCTTTGGCATCGAGTTCAGCTACGCCATGGAGA...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTAGGCGTAGATACACATaGCCCAGCAGCCCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFRRRYT*PSSPWS
Trigger: TGACCATGGGCTGCTGGGGCATGTGTATCTACGCCT...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTGGACGCTGTCTATGTTaGCCGTGCCAAAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALGRCLC*PCQRMR
Trigger: CCTCATCCTTTGGCACGGCCAACATAGACAGCGTCC...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR GCA 90 bp ATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTGTCCGCACTGGACCCTaGAAACTTCTTACTCTGATA +
Preference number: 4 (lower is better)
Translates to: IYIPVGSQSPCPTRPFGPVRTGP*KLLTLI
Trigger: TATCAGAGTAAGAAGTTTGCAGGGTCCAGTGCGGAC...AGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTCCCGTTTTATCCCAGTaGATTCCGCCGACCACGTAT +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFPVLSQ*IPPTTY
Trigger: ATACGTGGTCGGCGGAATCCACTGGGATAAAACGGG...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTTATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCGGACGCTGTCTATGTTaGCCGTGCCAAAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FITYLHSSRQPVPLSNKAGRCLC*PCQRMR
Trigger: CCTCATCCTTTGGCACGGCCAACATAGACAGCGTCC...GGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CCA 90 bp TTTATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCGGAAGGACACGAGGCTaGAGAAGTACATCACCCCGT +
Preference number: 4 (lower is better)
Translates to: FITYLHSSRQPVPLSNKAGRTRG*RSTSPR
Trigger: ACGGGGTGATGTACTTCTCCAGCCTCGTGTCCTTCC...GGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp ATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTAGTAGAAGGCAGCACTaGAGGCGTAGATACACATGC +
Preference number: 4 (lower is better)
Translates to: ITYLHSSRQPVPLSNKALSRRQH*RRRYTC
Trigger: GCATGTGTATCTACGCCTTCAGTGCTGCCTTCTACT...AAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR TCA 90 bp TCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTATATTGGCCACCTGCTaGCTGAAGGTCACATTCCTT +
Preference number: 4 (lower is better)
Translates to: SHIYIPVGSQSPCPTRPFILATC*LKVTFL
Trigger: AAGGAATGTGACCTTCAGTCAGCAGGTGGCCAATAT...AAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp CCCTCAGAATGTCCCCGTCACAGCCGGAGGTCAGGGCACCCTCTCTaGCCTCCAGAAGTCCACGGTCCTGGCGGTAGAAGCCGTCGGGGG +
Preference number: 5 (lower is better)
Translates to: PSECPRHSRRSGHPL*PPEVHGPGGRSRRG
Trigger: CCCCCGACGGCTTCTACCGCCAGGACCGTGGACTTCTGGAGGGCAGAGAGGGTGCCCTGACCTCCGGCTGTGACGGGGACATTCTGAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 90 bp CCAGGAGGGCGTGGATGTTCAGGCCTCGGTCCTGGTCTGCGGGGCTaGACACGTCCATCATGTAGGCGTGGCTGGGGTTGTCCGCCGAGT +
Preference number: 5 (lower is better)
Translates to: PGGRGCSGLGPGLRG*TRPSCRRGWGCPPS
Trigger: ACTCGGCGGACAACCCCAGCCACGCCTACATGATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAACATCCACGCCCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp GGCATGTTGCAGATGGTGGAGCAGAGGCGCCCCACGGACAGAGGCTaGTCCGCGCGCTCGCTGGAGCCCGTCAGCTCGCTCTCATACTTC +
Preference number: 5 (lower is better)
Translates to: GMLQMVEQRRPTDRG*SARSLEPVSSLSYF
Trigger: GAAGTATGAGAGCGAGCTGACGGGCTCCAGCGAGCGCGCGGAGCAGCCTCTGTCCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 90 bp AAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTaGAGGCGCGTGTCCGGAGTCGAGGCTCCGCGATGTCAGACGTTC +
Preference number: 5 (lower is better)
Translates to: KALWSSLVGLLQTPR*RRVSGVEAPRCQTF
Trigger: GAACGTCTGACATCGCGGAGCCTCGACTCCGGACACGCGCCTGCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS GCA 90 bp GCAGCAGGCCCCACTTGTGGTTCCCGGTCACGTCAGCCAGGGCGATaGCAATGTCCCGGCCATTCAGCAAGAGCGAGAGGCCCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: AAGPTCGSRSRQPGR*QCPGHSARARGPAV
Trigger: CACTGCTGGGCCTCTCGCTCTTGCTGAATGGCCGGGACATTGGCATCGCCCTGGCTGACGTGACCGGGAACCACAAGTGGGGCCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp GAGACCTGCCAGGAGGGCGTGGATGTTCAGGCCTCGGTCCTGGTCTaGGGGGCTGCACACGTCCATCATGTAGGCGTGGCTGGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: ETCQEGVDVQASVLV*GAAHVHHVGVAGVV
Trigger: GACAACCCCAGCCACGCCTACATGATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAACATCCACGCCCTCCTGGCAGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTGCATGAAGCTGCCGTACTaGGGCGTGAGGGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SNKALWSSLVGLLQTPRCMKLPY*GVRGLG
Trigger: GCCCAGCCCCCTCACGCCCAAGTACGGCAGCTTCAT...GCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCCACCCCAGGAAGTGGTaGACGCAGAGGGTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACHPRKW*TQRVRS
Trigger: GCTACGCACCCTCTGCGTCAACCACTTCCTGGGGTG...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCAGCAGCAGGCCCCACTaGTGGTTCCCGGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPSSRPH*WFPVTS
Trigger: TGACGTGACCGGGAACCACAAGTGGGGCCTGCTGCT...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp GGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCAGCGCCTTGGGCATGTaGCAGATGGTGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GSQSPCPTRPFGPHWSACSALGM*QMVEQR
Trigger: CCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCT...GCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp GTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCAAGTACATCACCCCGTaGGCACTGCCCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: VGSQSPCPTRPFGPHWSAKYITP*ALPTAE
Trigger: CTCGGCCGTGGGCAGTGCCAACGGGGTGATGTACTT...GGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGAAGTACATCACCCCGTaGGCACTGCCCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLKYITP*ALPTAE
Trigger: CTCGGCCGTGGGCAGTGCCAACGGGGTGATGTACTT...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCAGCGCCTTGGGCATGTaGCAGATGGTGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SPCPTRPFGPHWSACSRPSALGM*QMVEQR
Trigger: CCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCT...GGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAAGGGTGCGTAGCGCCTaGGGCATGTTGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPRVRSA*GMLQMV
Trigger: CACCATCTGCAACATGCCCAAGGCGCTACGCACCCT...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGTCCAACAAGGCCCTTaGGTCCTCACTGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPVQQGP*VLTGRP
Trigger: AGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGAC...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS TCA 90 bp GTTTCGGGACCCCCTCCTCCGGCTGCGTCCGGGATGGCCAAGGTCTaGGGTCTCTTCAGAATCCCTGATGACCTCGGCTTAGAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: VSGPPPPAASGMAKV*GLFRIPDDLGLEVS
Trigger: GGACACCTCTAAGCCGAGGTCATCAGGGATTCTGAAGAGACCTCAGACCTTGGCCATCCCGGACGCAGCCGGAGGAGGGGGTCCCGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS TCA 90 bp ACGTATCCAAAGCCTCCTCCGAGACCTGGGGAAAGAGACAGGGTTTaGGTTCCCTTCTGCGGGAGGAGAAGCCCCAAACGCGGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: TYPKPPPRPGERDRV*VPFCGRRSPKRGGP
Trigger: GGGGCCACCGCGTTTGGGGCTTCTCCTCCCGCAGAAGGGAACTCAAACCCTGTCTCTTTCCCCAGGTCTCGGAGGAGGCTTTGGATACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497660.5
CDS CCA 90 bp AAATCCCGTAGGTTATGCAGAGCGACAGGACCACGTAGAGGTTCCTaGAGAGGGTGGCAAGCCCGGTCCCCAGGCCGAAGGCGAGATAGG +
Preference number: 5 (lower is better)
Translates to: KSRRLCRATGPRRGS*RGWQARSPGRRRDR
Trigger: CCTATCTCGCCTTCGGCCTGGGGACCGGGCTTGCCACCCTCTCCAGGAACCTCTACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS-3UTR CAA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGAGGACGCTGTCTATGTaGGCCGTGCCAAAGGATGAG +
Preference number: 5 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQRTLSM*AVPKDE
Trigger: CTCATCCTTTGGCACGGCCAACATAGACAGCGTCCT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp AGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGAAGAGAATGCAGCCGTaGAAAAGCAGCTCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: RQPVPLSNKALWSSLVGLKRMQP*KSSSRK
Trigger: CTTCCGGGAGCTGCTTTTCAACGGCTGCATTCTCTT...CAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACAGCAGCAGGCCCCACTaGTGGTTCCCGGTCACGTCA +
Preference number: 5 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHSSRPH*WFPVTS
Trigger: TGACGTGACCGGGAACCACAAGTGGGGCCTGCTGCT...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp CCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGTCATACTTCACGCCGTaGAGCAGGATATTGGCCACC +
Preference number: 5 (lower is better)
Translates to: PVPLSNKALWSSLVGLLQSYFTP*SRILAT
Trigger: GGTGGCCAATATCCTGCTCAACGGCGTGAAGTATGA...CTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp CCCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCATCATACTTCACGCCGTaGAGCAGGATATTGGCCACC +
Preference number: 5 (lower is better)
Translates to: PCPTRPFGPHWSACSRPPSYFTP*SRILAT
Trigger: GGTGGCCAATATCCTGCTCAACGGCGTGAAGTATGA...TGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp CATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACTGAGGGTGCGTAGCGCCTaGGGCATGTTGCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: HSSRQPVPLSNKALWSSLRVRSA*GMLQMV
Trigger: CACCATCTGCAACATGCCCAAGGCGCTACGCACCCT...CAGTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp ACTGGCAGCTCAGCAGAGAGATGTCCACGCCCATGCCCCGCCGGGTaGCGTCCGCACTGGACCCTGCAAACTTCTTACTCTGATAGTAAT +
Preference number: 5 (lower is better)
Translates to: TGSSAERCPRPCPAG*RPHWTLQTSYSDSN
Trigger: ATTACTATCAGAGTAAGAAGTTTGCAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGGGCGTGGACATCTCTCTGCTGAGCTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 90 bp CCAGTGGATTCCGCCGACCACGTATCCAAAGCCTCCTCCGAGACCTaGGGAAAGAGACAGGGTTTGAGTTCCCTTCTGCGGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVDSADHVSKASSET*GKRQGLSSLLREEK
Trigger: CTTCTCCTCCCGCAGAAGGGAACTCAAACCCTGTCTCTTTCCCCAGGTCTCGGAGGAGGCTTTGGATACGTGGTCGGCGGAATCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497660.5
CDS-3UTR CAA 90 bp CCTGTCCAACAAGGCCCTTTGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGATGCACTTCCTCCTCTaGGGGTGTCGTTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PVQQGPLVLTGRPAPDPQMHFLL*GCRLKL
Trigger: CAACTTCAAACGACACCCCAAGAGGAGGAAGTGCAT...CTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACACCCCAGGAAGTGGTaGACGCAGAGGGTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSHPRKW*TQRVRS
Trigger: GCTACGCACCCTCTGCGTCAACCACTTCCTGGGGTG...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCACGTCCAACAAGGCCCTTaGGTCCTCACTGGTCGGCCT +
Preference number: 5 (lower is better)
Translates to: YIPVGSQSPCPTRPFGPHVQQGP*VLTGRP
Trigger: AGGCCGACCAGTGAGGACCAAAGGGCCTTGTTGGAC...GTGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS TCA 90 bp GAAGCAGTCAATGAGGACGCTGTCTATGTTGGCCGTGCCAAAGGATaGGGCGAACTCGCTGATGCCCGTCAGGGAGCTGTCCCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: EAVNEDAVYVGRAKG*GELADARQGAVPAD
Trigger: ATCAGCAGGGACAGCTCCCTGACGGGCATCAGCGAGTTCGCCTCATCCTTTGGCACGGCCAACATAGACAGCGTCCTCATTGACTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 90 bp TCCGCGATGTCAGACGTTCAGCAGGAGGGGCCGGTGCTCCTCGTCTaGAGCGTCGCTGGGAGGAATTTCATAAATGACAAACAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SAMSDVQQEGPVLLV*SVAGRNFINDKQGG
Trigger: TCCTCCCTGTTTGTCATTTATGAAATTCCTCCCAGCGACGCTGCAGACGAGGAGCACCGGCCCCTCCTGCTGAACGTCTGACATCGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS-3UTR CAA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAGTCTCCTTCCAAACCTaGAGGTACACCGGTCACTCC +
Preference number: 5 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSVSFQT*RYTGHS
Trigger: GGAGTGACCGGTGTACCTCAAGGTTTGGAAGGAGAC...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCCTTTGGTCCTCAAGGACGCTGTCTATGTaGGCCGTGCCAAAGGATGAG +
Preference number: 5 (lower is better)
Translates to: LHSSRQPVPLSNKALWSSRTLSM*AVPKDE
Trigger: CTCATCCTTTGGCACGGCCAACATAGACAGCGTCCT...TGAGGACCAAAGGGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp AGTAAGGCAAGGTGCACAGGGTGGAAAATAAAATCCCGTAGGTTATaGAGAGCGACAGGACCACGTAGAGGTTCCTGGAGAGGGTGGCAA +
Preference number: 5 (lower is better)
Translates to: SKARCTGWKIKSRRL*RATGPRRGSWRGWQ
Trigger: TTGCCACCCTCTCCAGGAACCTCTACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTTTATTTTCCACCCTGTGCACCTTGCCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 90 bp TCTGATAGTAATCGCAGAGCAGCGAGTAAGGCAAGGTGCACAGGGTaGAAAATAAAATCCCGTAGGTTATGCAGAGCGACAGGACCACGT +
Preference number: 5 (lower is better)
Translates to: SDSNRRAASKARCTG*KIKSRRLCRATGPR
Trigger: ACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTTTATTTTCCACCCTGTGCACCTTGCCTTACTCGCTGCTCTGCGATTACTATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS-3UTR CAA 90 bp TTTATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCAAGAGAATGCAGCCGTaGAAAAGCAGCTCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: FITYLHSSRQPVPLSNKAKRMQP*KSSSRK
Trigger: CTTCCGGGAGCTGCTTTTCAACGGCTGCATTCTCTT...GGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS-3UTR CAA 90 bp TTTATCACATATTTACATTCCAGTAGGCAGCCAGTCCCCCTGTCCAACAAGGCCATGCACTTCCTCCTCTaGGGGTGTCGTTTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FITYLHSSRQPVPLSNKAMHFLL*GCRLKL
Trigger: CAACTTCAAACGACACCCCAAGAGGAGGAAGTGCAT...GGCCTTGTTGGACAGGGGGACTGGCTGCCTACTGGAATGTAAATATGTGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 90 bp ACTTCTTACTCTGATAGTAATCGCAGAGCAGCGAGTAAGGCAAGGTaGACAGGGTGGAAAATAAAATCCCGTAGGTTATGCAGAGCGACA +
Preference number: 5 (lower is better)
Translates to: TSYSDSNRRAASKAR*TGWKIKSRRLCRAT
Trigger: TGTCGCTCTGCATAACCTACGGGATTTTATTTTCCACCCTGTGCACCTTGCCTTACTCGCTGCTCTGCGATTACTATCAGAGTAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 72 bp CTCCCGGCGGGGTGCTGCTGGCTGCGGGGATCATCGTaGGGAGGGCTGGTGGGCGTCCCTGTGGGTGGAGAC +
Preference number: 6 (lower is better)
Translates to: LPAGCCWLRGSS*GGLVGVPVGGD
Trigger: GTCTCCACCCACAGGGACGCCCACCAGCCCTCCCCACGATGATCCCCGCAGCCAGCAGCACCCCGCCGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471889.7
CDS GCA 72 bp CAGATGGTGGAGCAGAGGCGCCCCACGGACAGAGGCTaGTCCGCGCGCTCGCTGGAGCCCGTCAGCTCGCTC +
Preference number: 6 (lower is better)
Translates to: QMVEQRRPTDRG*SARSLEPVSSL
Trigger: GAGCGAGCTGACGGGCTCCAGCGAGCGCGCGGAGCAGCCTCTGTCCGTGGGGCGCCTCTGCTCCACCATCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CCA 72 bp GGCGCCCCACGGACAGAGGCTGCTCCGCGCGCTCGCTaGAGCCCGTCAGCTCGCTCTCATACTTCACGCCGT +
Preference number: 6 (lower is better)
Translates to: GAPRTEAAPRAR*SPSARSHTSRR
Trigger: ACGGCGTGAAGTATGAGAGCGAGCTGACGGGCTCCAGCGAGCGCGCGGAGCAGCCTCTGTCCGTGGGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 72 bp TGGTCCTCACTGGTCGGCCTGCTCCAGACCCCCAGGTaGAGGCGCGTGTCCGGAGTCGAGGCTCCGCGATGT +
Preference number: 6 (lower is better)
Translates to: WSSLVGLLQTPR*RRVSGVEAPRC
Trigger: ACATCGCGGAGCCTCGACTCCGGACACGCGCCTGCACCTGGGGGTCTGGAGCAGGCCGACCAGTGAGGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS GCA 72 bp TGTCCCCGTCACAGCCGGAGGTCAGGGCACCCTCTCTaGCCTCCAGAAGTCCACGGTCCTGGCGGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: CPRHSRRSGHPL*PPEVHGPGGRS
Trigger: GCTTCTACCGCCAGGACCGTGGACTTCTGGAGGGCAGAGAGGGTGCCCTGACCTCCGGCTGTGACGGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 72 bp AGTACTGGCAGCTCAGCAGAGAGATGTCCACGCCCATaGCCCGCCGGGTGCCGTCCGCACTGGACCCTGCAA +
Preference number: 6 (lower is better)
Translates to: STGSSAERCPRP*PAGCRPHWTLQ
Trigger: TTGCAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGGGCGTGGACATCTCTCTGCTGAGCTGCCAGTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 72 bp CGCAGAGGGTGCGTAGCGCCTTGGGCATGTTGCAGATaGTGGAGCAGAGGCGCCCCACGGACAGAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RRGCVAPWACCR*WSRGAPRTEAA
Trigger: AGCAGCCTCTGTCCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCTACGCACCCTCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CAA 90 bp CCCAGGAAGTGGTTGACGCAGAGGGTGCGTAGCGCCTTGGGCATGTaGCAGATGGTGGAGCAGAGGCGCCCCACGGACAGAGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PRKWLTQRVRSALGM*QMVEQRRPTDRGCS
Trigger: GGAGCAGCCTCTGTCCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCTACGCACCCTCTGCGTCAACCACTTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS GCA 72 bp CAGGAGGGCGTGGATGTTCAGGCCTCGGTCCTGGTCTaGGGGGCTGCACACGTCCATCATGTAGGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: QEGVDVQASVLV*GAAHVHHVGVA
Trigger: AGCCACGCCTACATGATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAACATCCACGCCCTCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS CCA 72 bp AGAGCGACAGGACCACGTAGAGGTTCCTGGAGAGGGTaGCAAGCCCGGTCCCCAGGCCGAAGGCGAGATAGG +
Preference number: 6 (lower is better)
Translates to: RATGPRRGSWRG*QARSPGRRRDR
Trigger: CCTATCTCGCCTTCGGCCTGGGGACCGGGCTTGCCACCCTCTCCAGGAACCTCTACGTGGTCCTGTCGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CAA 90 bp GAGAGCCACCCCAGGAAGTGGTTGACGCAGAGGGTGCGTAGCGCCTaGGGCATGTTGCAGATGGTGGAGCAGAGGCGCCCCACGGACAGA +
Preference number: 6 (lower is better)
Translates to: ESHPRKWLTQRVRSA*GMLQMVEQRRPTDR
Trigger: TCTGTCCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCTACGCACCCTCTGCGTCAACCACTTCCTGGGGTGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS GCA 72 bp CCCACTTGTGGTTCCCGGTCACGTCAGCCAGGGCGATaGCAATGTCCCGGCCATTCAGCAAGAGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PTCGSRSRQPGR*QCPGHSARARG
Trigger: GCCTCTCGCTCTTGCTGAATGGCCGGGACATTGGCATCGCCCTGGCTGACGTGACCGGGAACCACAAGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 72 bp CGTGGATGTTCAGGCCTCGGTCCTGGTCTGCGGGGCTaGACACGTCCATCATGTAGGCGTGGCTGGGGTTGT +
Preference number: 6 (lower is better)
Translates to: RGCSGLGPGLRG*TRPSCRRGWGC
Trigger: ACAACCCCAGCCACGCCTACATGATGGACGTGTGCAGCCCCGCAGACCAGGACCGAGGCCTGAACATCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS CCA 72 bp AGGTTATGCAGAGCGACAGGACCACGTAGAGGTTCCTaGAGAGGGTGGCAAGCCCGGTCCCCAGGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: RLCRATGPRRGS*RGWQARSPGRR
Trigger: CCTTCGGCCTGGGGACCGGGCTTGCCACCCTCTCCAGGAACCTCTACGTGGTCCTGTCGCTCTGCATAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 72 bp GGGAGGAGTACAGGCAGCCCAGGAAGGACACGAGGCTaGAGAAGTACATCACCCCGTTGGCACTGCCCACGG +
Preference number: 6 (lower is better)
Translates to: GRSTGSPGRTRG*RSTSPRWHCPR
Trigger: CCGTGGGCAGTGCCAACGGGGTGATGTACTTCTCCAGCCTCGTGTCCTTCCTGGGCTGCCTGTACTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CAA 72 bp TGGTTGACGCAGAGGGTGCGTAGCGCCTTGGGCATGTaGCAGATGGTGGAGCAGAGGCGCCCCACGGACAGA +
Preference number: 6 (lower is better)
Translates to: WLTQRVRSALGM*QMVEQRRPTDR
Trigger: TCTGTCCGTGGGGCGCCTCTGCTCCACCATCTGCAACATGCCCAAGGCGCTACGCACCCTCTGCGTCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS TCA 72 bp CCCCCTCCTCCGGCTGCGTCCGGGATGGCCAAGGTCTaGGGTCTCTTCAGAATCCCTGATGACCTCGGCTTA +
Preference number: 6 (lower is better)
Translates to: PPPPAASGMAKV*GLFRIPDDLGL
Trigger: TAAGCCGAGGTCATCAGGGATTCTGAAGAGACCTCAGACCTTGGCCATCCCGGACGCAGCCGGAGGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS GCA 72 bp TCAGCAGAGAGATGTCCACGCCCATGCCCCGCCGGGTaGCGTCCGCACTGGACCCTGCAAACTTCTTACTCT +
Preference number: 6 (lower is better)
Translates to: SAERCPRPCPAG*RPHWTLQTSYS
Trigger: AGAGTAAGAAGTTTGCAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGGGCGTGGACATCTCTCTGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS CCA 72 bp TGGTTTCGGGACCCCCTCCTCCGGCTGCGTCCGGGATaGCCAAGGTCTGAGGTCTCTTCAGAATCCCTGATG +
Preference number: 6 (lower is better)
Translates to: WFRDPLLRLRPG*PRSEVSSESLM
Trigger: CATCAGGGATTCTGAAGAGACCTCAGACCTTGGCCATCCCGGACGCAGCCGGAGGAGGGGGTCCCGAAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CAA 90 bp CTGTCGTGGCCGCCCGTGAAGCAGTCAATGAGGACGCTGTCTATGTaGGCCGTGCCAAAGGATGAGGCGAACTCGCTGATGCCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: LSWPPVKQSMRTLSM*AVPKDEANSLMPVR
Trigger: CCTGACGGGCATCAGCGAGTTCGCCTCATCCTTTGGCACGGCCAACATAGACAGCGTCCTCATTGACTGCTTCACGGGCGGCCACGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CAA 90 bp CACGTATCCAAAGCCTCCTCCGAGACCTGGGGAAAGAGACAGGGTTaGAGTTCCCTTCTGCGGGAGGAGAAGCCCCAAACGCGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: HVSKASSETWGKRQG*SSLLREEKPQTRWP
Trigger: GGGCCACCGCGTTTGGGGCTTCTCCTCCCGCAGAAGGGAACTCAAACCCTGTCTCTTTCCCCAGGTCTCGGAGGAGGCTTTGGATACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497660.5
CDS CCA 72 bp TGTCCACGCCCATGCCCCGCCGGGTGCCGTCCGCACTaGACCCTGCAAACTTCTTACTCTGATAGTAATCGC +
Preference number: 6 (lower is better)
Translates to: CPRPCPAGCRPH*TLQTSYSDSNR
Trigger: GCGATTACTATCAGAGTAAGAAGTTTGCAGGGTCCAGTGCGGACGGCACCCGGCGGGGCATGGGCGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS TCA 72 bp AAGCCTCCTCCGAGACCTGGGGAAAGAGACAGGGTTTaGGTTCCCTTCTGCGGGAGGAGAAGCCCCAAACGC +
Preference number: 6 (lower is better)
Translates to: KPPPRPGERDRV*VPFCGRRSPKR
Trigger: GCGTTTGGGGCTTCTCCTCCCGCAGAAGGGAACTCAAACCCTGTCTCTTTCCCCAGGTCTCGGAGGAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497660.5
CDS TCA 72 bp AATGAGGACGCTGTCTATGTTGGCCGTGCCAAAGGATaGGGCGAACTCGCTGATGCCCGTCAGGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: NEDAVYVGRAKG*GELADARQGAV
Trigger: GACAGCTCCCTGACGGGCATCAGCGAGTTCGCCTCATCCTTTGGCACGGCCAACATAGACAGCGTCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CAA 72 bp CCGCCCGTGAAGCAGTCAATGAGGACGCTGTCTATGTaGGCCGTGCCAAAGGATGAGGCGAACTCGCTGATG +
Preference number: 6 (lower is better)
Translates to: PPVKQSMRTLSM*AVPKDEANSLM
Trigger: CATCAGCGAGTTCGCCTCATCCTTTGGCACGGCCAACATAGACAGCGTCCTCATTGACTGCTTCACGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000481265.1
ENST00000497660.5
CDS CAA 72 bp AAAGCCTCCTCCGAGACCTGGGGAAAGAGACAGGGTTaGAGTTCCCTTCTGCGGGAGGAGAAGCCCCAAACG +
Preference number: 6 (lower is better)
Translates to: KASSETWGKRQG*SSLLREEKPQT
Trigger: CGTTTGGGGCTTCTCCTCCCGCAGAAGGGAACTCAAACCCTGTCTCTTTCCCCAGGTCTCGGAGGAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497660.5
CDS GCA 72 bp TCAGACGTTCAGCAGGAGGGGCCGGTGCTCCTCGTCTaGAGCGTCGCTGGGAGGAATTTCATAAATGACAAA +
Preference number: 6 (lower is better)
Translates to: SDVQQEGPVLLV*SVAGRNFINDK
Trigger: TTTGTCATTTATGAAATTCCTCCCAGCGACGCTGCAGACGAGGAGCACCGGCCCCTCCTGCTGAACGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS TCA 72 bp CAGGACAAGAATGAAAGGGCGTCTCCTTCCAAACCTTaGGGTACACCGGTCACTCCAAGCACCCAACAGAGG +
Preference number: 6 (lower is better)
Translates to: QDKNERASPSKP*GTPVTPSTQQR
Trigger: CCTCTGTTGGGTGCTTGGAGTGACCGGTGTACCTCAAGGTTTGGAAGGAGACGCCCTTTCATTCTTGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289877.8
ENST00000471889.7
CDS GCA 72 bp AGGTGCACAGGGTGGAAAATAAAATCCCGTAGGTTATaGAGAGCGACAGGACCACGTAGAGGTTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RCTGWKIKSRRL*RATGPRRGSWR
Trigger: TCTCCAGGAACCTCTACGTGGTCCTGTCGCTCTGCATAACCTACGGGATTTTATTTTCCACCCTGTGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5
CDS GCA 72 bp TCTGATAGTAATCGCAGAGCAGCGAGTAAGGCAAGGTaGACAGGGTGGAAAATAAAATCCCGTAGGTTATGC +
Preference number: 6 (lower is better)
Translates to: SDSNRRAASKAR*TGWKIKSRRLC
Trigger: GCATAACCTACGGGATTTTATTTTCCACCCTGTGCACCTTGCCTTACTCGCTGCTCTGCGATTACTATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289877.8
ENST00000471889.7
ENST00000497660.5