RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC44A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070214

Ensembl transcript IDs: ENST00000374720.8, ENST00000374723.5, ENST00000374724.1, ENST00000470972.5, ENST00000607692.1, ENST00000607701.1

Found 921 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGACACACCGATGTGTGTTTTCTGCTCATATCACCCCATATGCTaGGCTGGGCTTGACACTGGATGTGAAGACTCAGTGCCTGAGAGA +
Preference number: 1 (lower is better)
Translates to: QDTPMCVFCSYHPIC*AGLDTGCEDSVPER
Trigger: TCTCTCAGGCACTGAGTCTTCACATCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGGTGTGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp AATCAAGACACACCGATGTGTGTTTTCTGCTCATATCACCCCATATaGTGGGCTGGGCTTGACACTGGATGTGAAGACTCAGTGCCTGAG +
Preference number: 1 (lower is better)
Translates to: NQDTPMCVFCSYHPI*WAGLDTGCEDSVPE
Trigger: CTCAGGCACTGAGTCTTCACATCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGGTGTGTCTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTaGTCATATCACCCCATATGCTGGGCTGGGCTTGACACTGGATGT +
Preference number: 1 (lower is better)
Translates to: HYTAARNQDTPMCVF*SYHPICWAGLDTGC
Trigger: ACATCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp TTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGGTTCATTAAAACTCTTCTAGGCCGG +
Preference number: 1 (lower is better)
Translates to: LRPFLSNMGISTSGL*IYYCGRFIKTLLGR
Trigger: CCGGCCTAGAAGAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp ATCTGCAAATCAATACACAGAAACTTAAAGGCTAAACTCGCTGGGTaGCCCAGCTTCCTTTCAAATCAGGCACACAAATGTGTGGAGGAT +
Preference number: 1 (lower is better)
Translates to: ICKSIHRNLKAKLAG*PSFLSNQAHKCVED
Trigger: ATCCTCCACACATTTGTGTGCCTGATTTGAAAGGAAGCTGGGGCACCCAGCGAGTTTAGCCTTTAAGTTTCTGTGTATTGATTTGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR TCA 90 bp TTAGCCAATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTG +
Preference number: 1 (lower is better)
Translates to: LANSSVKHRRTLDTQ*IAKERSTCQCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAATTGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 90 bp ACATTTAGATACTTAGACTGGACTTACGCCCTTTTCTATCCAACATaGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGT +
Preference number: 1 (lower is better)
Translates to: TFRYLDWTYALFYPT*EFPPVVSAFTTVEG
Trigger: ACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 90 bp CAGCCTGAAAAAGTAGGAAATGGTTTGATGCCTGACTATAAGTCATaGGCCACTGGGATCAAATTTCACAAGAACTTCAAACCCCTTGAT +
Preference number: 1 (lower is better)
Translates to: QPEKVGNGLMPDYKS*ATGIKFHKNFKPLD
Trigger: ATCAAGGGGTTTGAAGTTCTTGTGAAATTTGATCCCAGTGGCTCATGACTTATAGTCAGGCATCAAACCATTTCCTACTTTTTCAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 90 bp CCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTaGAGTAATAAGATCCTGCTCTTCATAATCGCAGACTCTCAACAG +
Preference number: 1 (lower is better)
Translates to: PLGCWWFEKLVTCFH*SNKILLFIIADSQQ
Trigger: CTGTTGAGAGTCTGCGATTATGAAGAGCAGGATCTTATTACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR GCA 90 bp ATTACTGGCAGTTCTGGTTTTGGAACTGATCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTAAAATGGCTGTTAGTAGCTAGTAAT +
Preference number: 1 (lower is better)
Translates to: ITGSSGFGTDPRILP*RLGDLLKWLLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp AAATATGTGGCACCAAAACATACTTCTCATGCCACATTACACAGCTaGGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCA +
Preference number: 1 (lower is better)
Translates to: KYVAPKHTSHATLHS*EKSRHTDVCFLLIS
Trigger: TGATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATGTGGCATGAGAAGTATGTTTTGGTGCCACATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp TCCATGTTTCTGTCCCTTCTTTATTCCTCCCAGCATTACTTAATCTaGAAATCAATACACAGAAACTTAAAGGCTAAACTCGCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: SMFLSLLYSSQHYLI*KSIHRNLKAKLAGC
Trigger: GCACCCAGCGAGTTTAGCCTTTAAGTTTCTGTGTATTGATTTGCAGATTAAGTAATGCTGGGAGGAATAAAGAAGGGACAGAAACATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR CCA 90 bp TACACTTCTGTGACAAAAGGGCATATCACATTTAGATACTTAGACTaGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTG +
Preference number: 1 (lower is better)
Translates to: YTSVTKGHITFRYLD*TYALFYPTWEFPPV
Trigger: CACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAATGTGATATGCCCTTTTGTCACAGAAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 90 bp AGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTATACAATCTCAGTGCTCTAGCTAAA +
Preference number: 1 (lower is better)
Translates to: SHCIKCFKGTTGFEL*SSMQGLYNLSALAK
Trigger: TTTAGCTAGAGCACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 90 bp ATTTCTGCACAAGAAAAACATTTCAAAGCTCCGTTTCATATAGGCTaGTTGTTCTCTGAAGCCAGATGGAATTCCATCCAATTCAGAGCT +
Preference number: 1 (lower is better)
Translates to: ISAQEKHFKAPFHIG*LFSEARWNSIQFRA
Trigger: AGCTCTGAATTGGATGGAATTCCATCTGGCTTCAGAGAACAATCAGCCTATATGAAACGGAGCTTTGAAATGTTTTTCTTGTGCAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 90 bp GGGGTAATTATCTTTGGAGCAATAATAAGCAAAACAATGTTAGTGTaGAGAGCTTTGGAGTTAGAACTAGATTTGAATCCTGACTCTGAC +
Preference number: 1 (lower is better)
Translates to: GVIIFGAIISKTMLV*RALELELDLNPDSD
Trigger: GTCAGAGTCAGGATTCAAATCTAGTTCTAACTCCAAAGCTCTCCACACTAACATTGTTTTGCTTATTATTGCTCCAAAGATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR TCA 90 bp AATTTAGTTCCCAATGTTTGTGAAAGTCCAAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAATTTTCTCACATGATTTGCTCTCTC +
Preference number: 1 (lower is better)
Translates to: NLVPNVCESPKSVRL*NRWYSEFSHMICSL
Trigger: GAGAGAGCAAATCATGTGAGAAAATTCAGAATACCATCTGTTTCATAGCCGCACAGATTTTGGACTTTCACAAACATTGGGAACTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 90 bp ATGAGAGGAAGTATAGCATTGATAAGGTGTTGGGGTAATTATCTTTaGAGCAATAATAAGCAAAACAATGTTAGTGTGGAGAGCTTTGGA +
Preference number: 1 (lower is better)
Translates to: MRGSIALIRCWGNYL*SNNKQNNVSVESFG
Trigger: TCCAAAGCTCTCCACACTAACATTGTTTTGCTTATTATTGCTCCAAAGATAATTACCCCAACACCTTATCAATGCTATACTTCCTCTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR CCA 90 bp ACCTACACTGCCATTATGAGAGGAAGTATAGCATTGATAAGGTGTTaGGGTAATTATCTTTGGAGCAATAATAAGCAAAACAATGTTAGT +
Preference number: 1 (lower is better)
Translates to: TYTAIMRGSIALIRC*GNYLWSNNKQNNVS
Trigger: ACTAACATTGTTTTGCTTATTATTGCTCCAAAGATAATTACCCCAACACCTTATCAATGCTATACTTCCTCTCATAATGGCAGTGTAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTATCACCCCATATGCTaGGCTGGGCTTGACACTGGA +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGYHPIC*AGLDTG
Trigger: TCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGGGGTGGAGTTCTATTaGCAGAGGAATCTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGGVEFY*QRNLKL
Trigger: CAGCTTCAGATTCCTCTGCCAATAGAACTCCACCCC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTAGCAGCAACAGTCCATaGTGCAGGGATGTCCAAGTG +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSSSNSP*CRDVQV
Trigger: CACTTGGACATCCCTGCATCATGGACTGTTGCTGCT...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGINCGR*TDKPPD
Trigger: GTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGAATAATCTGGTACCTTaGCCCCAAATAACCGCCAGG +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGNNLVP*PQITAR
Trigger: CCTGGCGGTTATTTGGGGGCAAGGTACCAGATTATT...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGTAAGGGACTGGGGGTaGAGTTCTATTGGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGVRDWG*SSIGRG
Trigger: TCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTAC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTACAGGGGTGGAAGCTaGCCGTCTGAGGGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNYRGGS*PSEGPE
Trigger: TTCAGGGCCCTCAGACGGCCAGCTTCCACCCCTGTA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 90 bp AGTCATGAGCCACTGGGATCAAATTTCACAAGAACTTCAAACCCCTaGATGAGTTTCTGCCTGCTTTTTCAAGGGCCCAGGGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: SHEPLGSNFTRTSNP*MSFCLLFQGPREPS
Trigger: GGAAGGCTCCCTGGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCTTGTGAAATTTGATCCCAGTGGCTCATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 2 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTTAACCCTAAGCCACTaGCGTTACTCTGAAGCCGAA +
Preference number: 2 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCLTLSH*RYSEAE
Trigger: TTCGGCTTCAGAGTAACGTCAGTGGCTTAGGGTTAA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTTTAACCCTAAGCCACTaGCGTTACTCTGAAGCCGAA +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSLTLSH*RYSEAE
Trigger: TTCGGCTTCAGAGTAACGTCAGTGGCTTAGGGTTAA...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAAGGAACAACTGGCTTTaGGCTCTGCTCATCCATGCA +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTRNNWL*ALLIHA
Trigger: TGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTTTTAGAGCAGCCTTTTaGCTTGGGTTCATTAGCCCC +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSFRAAF*LGFISP
Trigger: GGGGCTAATGAACCCAAGTCAAAAGGCTGCTCTAAA...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGAAGGAGAGGAGCACCTaGCAGTGTGTTTTCAGATTG +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRKERST*QCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGCCACATTACACAGCTaGGAGAAATCAAGACACACC +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGATLHS*EKSRHT
Trigger: GGTGTGTCTTGATTTCTCGCAGCTGTGTAATGTGGC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTCACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGCACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCTCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTGCTCTAAAGCAGTTTaGGTCCAGAATAAAGGGGTC +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRCSKAV*VQNKGV
Trigger: GACCCCTTTATTCTGGACCCAAACTGCTTTAGAGCA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTCTAGGAGTGTGGGGTaGGGTAGGGGGCTGACTTTT +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSRSVG*GRGLTF
Trigger: AAAAGTCAGCCCCCTACCCCACCCCACACTCCTAGA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGCCACTTGGCTGTTGGTaGTTTGAGAAACTTGTTACA +
Preference number: 2 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRPLGCW*FEKLVT
Trigger: TGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGG...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR CAA 90 bp CAGGGAAGGCAAGGAAGCCCTTGGCAGATACCAAGATCAGTGGTATaGGAAATAACTTACAATCAGCAGCCTAATGCCCTCACGGAAAAA +
Preference number: 2 (lower is better)
Translates to: QGRQGSPWQIPRSVV*EITYNQQPNALTEK
Trigger: TTTTTCCGTGAGGGCATTAGGCTGCTGATTGTAAGTTATTTCCAATACCACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 2 (lower is better)
Translates to: NISHCIKCFKGTTGFELCPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAGAAGATGGAAGCAGTaGGCGAATAGCAATAAGGCA +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHERRWKQ*ANSNKA
Trigger: TGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCATGGTGGAAATAGTTaGAGCCTCAGGGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSHGGNS*SLRGSD
Trigger: ATCACTGCCCCTGAGGCTTCAACTATTTCCACCATG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCAGAACACACCTCCGTaGTTTATGCAGGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGQNTPP*FMQEEK
Trigger: TTTTTCTTCCTGCATAAATCACGGAGGTGTGTTCTG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGCCTGACTATAAGTCATaGGCCACTGGGATCAAATTT +
Preference number: 2 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKPDYKS*ATGIKF
Trigger: AAATTTGATCCCAGTGGCTCATGACTTATAGTCAGG...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACCCTACTGTATTGACTaGTCTTTAAATTTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEPYCID*SLNLAA
Trigger: GGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACCGTTTCATATAGGCTaGTTGTTCTCTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEPFHIG*LFSEAR
Trigger: TCTGGCTTCAGAGAACAATCAGCCTATATGAAACGG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGATGACATGGCTTCTTTaGTTGGGGAAAACTGATTGG +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRMTWLL*LGKTDW
Trigger: CCAATCAGTTTTCCCCAATCAAAGAAGCCATGTCAT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 2 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGSKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAGTTCAGAAAGGCTGTaGCAGCCAGTAAGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGSSERL*QPVSKV
Trigger: AACTTTACTTACTGGCTGGCACAGCCTTTCTGAACT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGTCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAAGGCAAGGAAGCCCTTaGCAGATACCAAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: RIQKLTVAGALISLQTLRRQGSP*QIPRSV
Trigger: CACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTGTAAGGGACTGGGGGTaGAGTTCTATTGGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIVRDWG*SSIGRG
Trigger: TCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTAC...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGGGAATTTCCACCAGTaGTCTCTGCATTTACTACTG +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTGNFHQ*SLHLLL
Trigger: CAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 2 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCATGGTGGAAATAGTTaGAGCCTCAGGGGCAGTGAT +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYHGGNS*SLRGSD
Trigger: ATCACTGCCCCTGAGGCTTCAACTATTTCCACCATG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAAGGCAGCCTACGCTGTaGATACAGAATACACAAATA +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTRQPTL*IQNTQI
Trigger: TATTTGTGTATTCTGTATTCACAGCGTAGGCTGCCT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACAGAACACACCTCCGTaGTTTATGCAGGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEQNTPP*FMQEEK
Trigger: TTTTTCTTCCTGCATAAATCACGGAGGTGTGTTCTG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAGTCTTACACTTCTGTaGCAAAAGGGCATATCACAT +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGSLTLL*QKGISH
Trigger: ATGTGATATGCCCTTTTGTCACAGAAGTGTAAGACT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAATGACATGGCTTCTTTaGTTGGGGAAAACTGATTGG +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEMTWLL*LGKTDW
Trigger: CCAATCAGTTTTCCCCAATCAAAGAAGCCATGTCAT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCCCTTGATGAGTTTCTaGCTGCTTTTTCAAGGGCCC +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYPLMSF*LLFQGP
Trigger: GGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGGAACCCATTCTATCTaGCCAATTATTCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEGTHSI*PIIPKS
Trigger: AGACTTGGGAATAATTGGGCAGATAGAATGGGTTCC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACATTAAATGACGGAAGTTaGCTTGTAAAAGCCACCCGT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTLNDGS*LVKATR
Trigger: ACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAA...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGCTAAACTCGCTGGGTaGCCCAGCTTCCTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYAKLAG*PSFLSN
Trigger: ATTTGAAAGGAAGCTGGGGCACCCAGCGAGTTTAGC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGCCTCTCATAGAAGATaGGTCTCTTGGATTTACACT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTASHRR*VSWIYT
Trigger: AGTGTAAATCCAAGAGACCCATCTTCTATGAGAGGC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTGTACAAAATCAAGATaGGAAGAAAGGGCACTACAG +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGCTKSR*EERALQ
Trigger: CTGTAGTGCCCTTTCTTCCCATCTTGATTTTGTACA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGTCCTTCAGATTAGTGTaGTTTCTATTCCCTAACCTG +
Preference number: 2 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKSFRLV*FLFPNL
Trigger: CAGGTTAGGGAATAGAAACCACACTAATCTGAAGGA...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGTTTTGGAATGTCAATaGGTTTCCATAACCGTCGGC +
Preference number: 2 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFVLECQ*VSITVG
Trigger: GCCGACGGTTATGGAAACCCATTGACATTCCAAAAC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCGATCTTGCTAAGACATaGGCTCTTAATTGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCDLAKT*ALNCVY
Trigger: ATACACACAATTAAGAGCTCATGTCTTAGCAAGATC...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTACCCCCTACTAGGGTaGAATCCTAAAACTGCCCAG +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLYPLLG*NPKTAQ
Trigger: CTGGGCAGTTTTAGGATTTCACCCTAGTAGGGGGTA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAAGGTCCCTACTGTATTaGCTGATCTTTAAATTTGGC +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTRSLLY*LIFKFG
Trigger: GCCAAATTTAAAGATCAGTCAATACAGTAGGGACCT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAAGGAGAGGAGCACCTaGCAGTGTGTTTTCAGATTG +
Preference number: 2 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYKERST*QCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTA +
Preference number: 2 (lower is better)
Translates to: RIQKLTVAGALISLQTLRTGFEL*SSMQGL
Trigger: TAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCAATAAACTCAGTAAGTaGCTCCTCCTTAACCATTAT +
Preference number: 2 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPNKLSK*LLLNHY
Trigger: ATAATGGTTAAGGAGGAGGCACTTACTGAGTTTATT...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 2 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCSKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTACCTAATAGTAAGGTaGAGATGTGAAGAAATCCAC +
Preference number: 2 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGYLIVR*RCEEIH
Trigger: GTGGATTTCTTCACATCTGCACCTTACTATTAGGTA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATTCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYSTSGL*IYYCGR
Trigger: CCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGA...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGAAAACCACGATACTCTaGTCACTACTACAATTGACA +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRKTTIL*SLLQLT
Trigger: TGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCAAAACCACGATACTCTaGTCACTACTACAATTGACA +
Preference number: 2 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCKTTIL*SLLQLT
Trigger: TGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTT...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAGGCAAGGAAGCCCTTaGCAGATACCAAGATCAGTG +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLRQGSP*QIPRSV
Trigger: CACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGGGGTGGAGTTCTATTaGCAGAGGAATCTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLGVEFY*QRNLKL
Trigger: CAGCTTCAGATTCCTCTGCCAATAGAACTCCACCCC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGTAAAGTTGGACCTTTaGTCTTCAGAAGATAGGGTT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTVKLDL*SSEDRV
Trigger: AACCCTATCTTCTGAAGACCAAAGGTCCAACTTTAC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACATTCTCTGAAGCCAGATaGAATTCCATCCAATTCAGA +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTFSEAR*NSIQFR
Trigger: TCTGAATTGGATGGAATTCCATCTGGCTTCAGAGAA...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGATCTTGCTAAGACATaGGCTCTTAATTGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTDLAKT*ALNCVY
Trigger: ATACACACAATTAAGAGCTCATGTCTTAGCAAGATC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAA +
Preference number: 2 (lower is better)
Translates to: EINCGRCTDKPPDSESFIAGMSK*VEPNFQ
Trigger: TTGGAAATTAGGTTCTACTCACTTGGACATCCCTGC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTG +
Preference number: 2 (lower is better)
Translates to: RIQKLTVAGALISLQTLRFWFWN*SQNSTL
Trigger: CAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAGAAGCTACTGTGTATaGATAGTGCCTACTTTTCAA +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHERSYCV*IVPTFQ
Trigger: TTGAAAAGTAGGCACTATTCATACACAGTAGCTTCT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTAACTCTCAACAGCTGGTaGGTGGGAGAACCTCATGTA +
Preference number: 2 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVTLNSW*VGEPHV
Trigger: TACATGAGGTTCTCCCACTCACCAGCTGTTGAGAGT...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR GCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 2 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 2 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTA +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICTGFEL*SSMQGL
Trigger: TAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGT...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTA +
Preference number: 2 (lower is better)
Translates to: EINCGRCTDKPPDSESFIPRILP*RLGDLL
Trigger: TAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGG...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGCTAAACTCGCTGGGTaGCCCAGCTTCCTTTCAAAT +
Preference number: 2 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKAKLAG*PSFLSN
Trigger: ATTTGAAAGGAAGCTGGGGCACCCAGCGAGTTTAGC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGCAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 2 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: RIQKLTVAGALISLQTLRSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 2 (lower is better)
Translates to: EQLALSSAHPCKDYTISVKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAGAAGATGGAAGCAGTaGGCGAATAGCAATAAGGCA +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLRRWKQ*ANSNKA
Trigger: TGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGGAACAACTGGCTTTaGGCTCTGCTCATCCATGCA +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYRNNWL*ALLIHA
Trigger: TGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAGCTGCTCTAGTGGGTaGCTGGAAAACACTAAAACA +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLSCSSG*LENTKT
Trigger: TGTTTTAGTGTTTTCCAGTCACCCACTAGAGCAGCT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAATTATAATCCTAGCTaGCAGGATGGGTGGATCAGA +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNNYNPS*QDGWIR
Trigger: TCTGATCCACCCATCCTGTCAGCTAGGATTATAATT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACACCGGAATTTTCAATaGTTTATGTTCCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEHRNFQ*FMFHVS
Trigger: AGAAACATGGAACATAAAGCATTGAAAATTCCGGTG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACACACCGGAATTTTCAATaGTTTATGTTCCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTHRNFQ*FMFHVS
Trigger: AGAAACATGGAACATAAAGCATTGAAAATTCCGGTG...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYTLANG*LLSPSD
Trigger: GTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTA +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLPRILP*RLGDLL
Trigger: TAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYINCGR*TDKPPD
Trigger: GTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGGAACCCATTCTATCTaGCCAATTATTCCCAAGTCT +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYGTHSI*PIIPKS
Trigger: AGACTTGGGAATAATTGGGCAGATAGAATGGGTTCC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACACAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 2 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTCAAGTCACCATTACTaGCAGTTCTGGTTTTGGAAC +
Preference number: 2 (lower is better)
Translates to: EINCGRCTDKPPDSESFISSHHY*QFWFWN
Trigger: GTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCTGAGCTCCGTGTCCTaGAGAAAATCATTTAAGTTG +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYLSSVS*RKSFKL
Trigger: CAACTTAAATGATTTTCTCCAGGACACGGAGCTCAG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGTTTTGGAATGTCAATaGGTTTCCATAACCGTCGGC +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLVLECQ*VSITVG
Trigger: GCCGACGGTTATGGAAACCCATTGACATTCCAAAAC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR CAA 90 bp CCAATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATaGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTATA +
Preference number: 2 (lower is better)
Translates to: PILQLNIVELWILNE*PRRGAPASVFSDCI
Trigger: TATACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAGAGCCTTAATTATCTaGTGGCAAAAACCACGATAC +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNRALII*WQKPRY
Trigger: GTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: RIQKLTVAGALISLQTLRKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTGTACAAAATCAAGATaGGAAGAAAGGGCACTACAG +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICCTKSR*EERALQ
Trigger: CTGTAGTGCCCTTTCTTCCCATCTTGATTTTGTACA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTTCCTTCAGATTAGTGTaGTTTCTATTCCCTAACCTG +
Preference number: 2 (lower is better)
Translates to: NMGISTSGLCIYYCGRFISFRLV*FLFPNL
Trigger: CAGGTTAGGGAATAGAAACCACACTAATCTGAAGGA...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCCAATTCAGAGCTCTTaGAAGTTAATTTCCCAGCAA +
Preference number: 2 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNPIQSS*KLISQQ
Trigger: TTGCTGGGAAATTAACTTCCAAGAGCTCTGAATTGG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTCATGGCTTCTTTGATTaGGGAAAACTGATTGGAGTA +
Preference number: 2 (lower is better)
Translates to: EINCGRCTDKPPDSESFIHGFFD*GKLIGV
Trigger: TACTCCAATCAGTTTTCCCCAATCAAAGAAGCCATG...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 2 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAA +
Preference number: 2 (lower is better)
Translates to: ENYSFKIATLAMLVSQILAGMSK*VEPNFQ
Trigger: TTGGAAATTAGGTTCTACTCACTTGGACATCCCTGC...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGAAGATGGAAGCAGTaGGCGAATAGCAATAAGGCA +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYRRWKQ*ANSNKA
Trigger: TGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTAGAAGCTACTGTGTATaGATAGTGCCTACTTTTCAA +
Preference number: 2 (lower is better)
Translates to: EINCGRCTDKPPDSESFIRSYCV*IVPTFQ
Trigger: TTGAAAAGTAGGCACTATTCATACACAGTAGCTTCT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTTCTCTGATTTTGGCTaGTTTATGTGTGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICFSDFG*FMCVCV
Trigger: TACACACACACACATAAATCAGCCAAAATCAGAGAA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374720.8
3UTR-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 2 (lower is better)
Translates to: EQLALSSAHPCKDYTISVVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGAC +
Preference number: 2 (lower is better)
Translates to: NISHCIKCFKGTTGFELCTLANG*LLSPSD
Trigger: GTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGT...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYSKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTAATAATCTGGTACCTTaGCCCCAAATAACCGCCAGG +
Preference number: 2 (lower is better)
Translates to: HEDSVLIILLFLQISVVSNNLVP*PQITAR
Trigger: CCTGGCGGTTATTTGGGGGCAAGGTACCAGATTATT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAAACAACAGTCACACTaGAGGATCAAAACATTAGCC +
Preference number: 2 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDKQQSH*RIKTLA
Trigger: GGCTAATGTTTTGATCCTCCAGTGTGACTGTTGTTT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 2 (lower is better)
Translates to: EQLALSSAHPCKDYTISVGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACTCAAGTCACCATTACTaGCAGTTCTGGTTTTGGAAC +
Preference number: 2 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYSSHHY*QFWFWN
Trigger: GTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 90 bp AGCAAAACAATGTTAGTGTGGAGAGCTTTGGAGTTAGAACTAGATTaGAATCCTGACTCTGACAACTGTGTGATCTTACACATAGGATAC +
Preference number: 2 (lower is better)
Translates to: SKTMLVWRALELELD*NPDSDNCVILHIGY
Trigger: GTATCCTATGTGTAAGATCACACAGTTGTCAGAGTCAGGATTCAAATCTAGTTCTAACTCCAAAGCTCTCCACACTAACATTGTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAA +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQAGMSK*VEPNFQ
Trigger: TTGGAAATTAGGTTCTACTCACTTGGACATCCCTGC...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACCCTACTGTATTGACTaGTCTTTAAATTTGGCCGCC +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQPYCID*SLNLAA
Trigger: GGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAATAAACTCAGTAAGTaGCTCCTCCTTAACCATTAT +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYNKLSK*LLLNHY
Trigger: ATAATGGTTAAGGAGGAGGCACTTACTGAGTTTATT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTTCTACCTTCAGCATCTaGTCCTCCAACTTTCTACCA +
Preference number: 2 (lower is better)
Translates to: HEDSVLIILLFLQISVVSSTFSI*SSNFLP
Trigger: TGGTAGAAAGTTGGAGGAGCAGATGCTGAAGGTAGA...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGTGAAGAAATCCACATaGTTCCCTAAAGAAGATAGA +
Preference number: 2 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLVKKST*FPKEDR
Trigger: TCTATCTTCTTTAGGGAAGCATGTGGATTTCTTCAC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGTTAAATGACGGAAGTTaGCTTGTAAAAGCCACCCGT +
Preference number: 2 (lower is better)
Translates to: ENYSFKIATLAMLVSQILLNDGS*LVKATR
Trigger: ACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAA...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR CCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTTTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 2 (lower is better)
Translates to: NMGISTSGLCIYYCGRFILRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICLRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 2 (lower is better)
Translates to: INCGRCTDKPPDSESFICGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 2 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 90 bp ATCTTTGGAGCAATAATAAGCAAAACAATGTTAGTGTGGAGAGCTTaGGAGTTAGAACTAGATTTGAATCCTGACTCTGACAACTGTGTG +
Preference number: 2 (lower is better)
Translates to: IFGAIISKTMLVWRA*ELELDLNPDSDNCV
Trigger: CACACAGTTGTCAGAGTCAGGATTCAAATCTAGTTCTAACTCCAAAGCTCTCCACACTAACATTGTTTTGCTTATTATTGCTCCAAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR TCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 2 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGAGCCTTAATTATCTaGTGGCAAAAACCACGATAC +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYRALII*WQKPRY
Trigger: GTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTG +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQFWFWN*SQNSTL
Trigger: CAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTTTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTG +
Preference number: 2 (lower is better)
Translates to: HEDSVLIILLFLQISVVSFWFWN*SQNSTL
Trigger: CAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAA...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAAGGCAGCCTACGCTGTaGATACAGAATACACAAATA +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQRQPTL*IQNTQI
Trigger: TATTTGTGTATTCTGTATTCACAGCGTAGGCTGCCT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAAAACCACGATACTCTaGTCACTACTACAATTGACA +
Preference number: 2 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYKTTIL*SLLQLT
Trigger: TGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACCATGGCTTCTTTGATTaGGGAAAACTGATTGGAGTA +
Preference number: 2 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYHGFFD*GKLIGV
Trigger: TACTCCAATCAGTTTTCCCCAATCAAAGAAGCCATG...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR GCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACCACCGGAATTTTCAATaGTTTATGTTCCATGTTTCT +
Preference number: 2 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYHRNFQ*FMFHVS
Trigger: AGAAACATGGAACATAAAGCATTGAAAATTCCGGTG...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR GCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGAAACAACAGTCACACTaGAGGATCAAAACATTAGCC +
Preference number: 2 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLKQQSH*RIKTLA
Trigger: GGCTAATGTTTTGATCCTCCAGTGTGACTGTTGTTT...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGCAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 2 (lower is better)
Translates to: ENYSFKIATLAMLVSQILQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 2 (lower is better)
Translates to: IMELSVSFYREEVRKLQQLRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGAAGCCCCTGTCATTTaGCTTGATGCCCTTCACACT +
Preference number: 3 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGEAPVI*LDALHT
Trigger: AGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTTC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGCTGGCAGTTCTGGTTTaGGAACTGATCCCAGAATTC +
Preference number: 3 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGLAVLV*ELIPEF
Trigger: GAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAG...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp GCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTaGTCATATCACCCCATATGCTGGGCTGGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: AARNQDTPMCVF*SYHPICWAGLD
Trigger: GTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp CCGATGTGTGTTTTCTGCTCATATCACCCCATATGCTaGGCTGGGCTTGACACTGGATGTGAAGACTCAGTG +
Preference number: 3 (lower is better)
Translates to: PMCVFCSYHPIC*AGLDTGCEDSV
Trigger: CACTGAGTCTTCACATCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTA +
Preference number: 3 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPATLAM*VSQILL
Trigger: TAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGAAGGAACAACTGGCTTaGAGCTCTGCTCATCCATGC +
Preference number: 3 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRKEQLA*SSAHPC
Trigger: GCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp ACACCGATGTGTGTTTTCTGCTCATATCACCCCATATaGTGGGCTGGGCTTGACACTGGATGTGAAGACTCA +
Preference number: 3 (lower is better)
Translates to: TPMCVFCSYHPI*WAGLDTGCEDS
Trigger: TGAGTCTTCACATCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGAGCAGAAAACACACATCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTCCCAGAATTCTACCTaGCAGGCTAGGAGATCTCTT +
Preference number: 3 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGSQNST*QARRSL
Trigger: AAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGGA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGCATCATCTTCAACTGTaGTTGGAACTGGACATGTTG +
Preference number: 3 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGHHLQL*LELDML
Trigger: CAACATGTCCAGTTCCAACAACAGTTGAAGATGATG...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGAAGCCCCTGTCATTTaGCTTGATGCCCTTCACACT +
Preference number: 3 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEEAPVI*LDALHT
Trigger: AGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTTC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp AAATGGCCGTTTAACCCTAAGCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACCGGAATTTTCAATGCT +
Preference number: 3 (lower is better)
Translates to: KWPFNPKPLTLL*SRSPSTGIFNA
Trigger: AGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGGCTTAGGGTTAAACGGCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGCTTTAGATTTTCTCTaGGCATATTCAAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGALDFL*AYSRVL
Trigger: CAAGACCCTTGAATATGCCAAGAGAAAATCTAAAGC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCATTGGCTGTTGGTGGTTaGAGAAACTTGTTACATGCT +
Preference number: 3 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPLAVGG*RNLLHA
Trigger: AGCATGTAACAAGTTTCTCAAACCACCAACAGCCAA...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGAACAGCGATACTGTTaGGTGATACTAGATATTAGA +
Preference number: 3 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGEQRYC*VILDIR
Trigger: TCTAATATCTAGTATCACCAAACAGTATCGCTGTTC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACATTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTFHQVT*EGHLLK
Trigger: TTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAA...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: RIQKLTVAGALISLQTLRVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp GGAGCAGCAACAGTCCATGATGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAAGTTCAGGACTTCCAT +
Preference number: 3 (lower is better)
Translates to: GAATVHDAGMSK*VEPNFQVQDFH
Trigger: ATGGAAGTCCTGAACTTGGAAATTAGGTTCTACTCACTTGGACATCCCTGCATCATGGACTGTTGCTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp AATTTCACAAGAACTTCAAACCCCTTGATGAGTTTCTaGCTGCTTTTTCAAGGGCCCAGGGAGCCTTCCATG +
Preference number: 3 (lower is better)
Translates to: NFTRTSNPLMSF*LLFQGPREPSM
Trigger: CATGGAAGGCTCCCTGGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCTTGTGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAAGGCAAGGAAGCCCTaGGCAGATACCAAGATCAGT +
Preference number: 3 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYKARKP*ADTKIS
Trigger: ACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTAAGGCAAGGAAGCCCTaGGCAGATACCAAGATCAGT +
Preference number: 3 (lower is better)
Translates to: INCGRCTDKPPDSESFICKARKP*ADTKIS
Trigger: ACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTT...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGCTTTAGATTTTCTCTaGGCATATTCAAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGALDFL*AYSRVL
Trigger: CAAGACCCTTGAATATGCCAAGAGAAAATCTAAAGC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp TCAAGTCACCATTACTGGCAGTTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTGCAGGCTAGGAGATCT +
Preference number: 3 (lower is better)
Translates to: SSHHYWQFWFWN*SQNSTLQARRS
Trigger: AGATCTCCTAGCCTGCAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp GGTCCTCCATCTCAGACACTTCCCACATACCTACACTaGCATTATGAGAGGAAGTATAGCATTGATAAGGTG +
Preference number: 3 (lower is better)
Translates to: GPPSQTLPTYLH*HYERKYSIDKV
Trigger: CACCTTATCAATGCTATACTTCCTCTCATAATGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGAACAGCGATACTGTTaGGTGATACTAGATATTAGA +
Preference number: 3 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKREQRYC*VILDIR
Trigger: TCTAATATCTAGTATCACCAAACAGTATCGCTGTTC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGCCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 3 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCTGGCAGTTCTGGTTTaGGAACTGATCCCAGAATTC +
Preference number: 3 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYLAVLV*ELIPEF
Trigger: GAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGCTCAAAGAGACCCATaGTCTCTTCAAAATAACTTG +
Preference number: 3 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTAQRDP*SLQNNL
Trigger: CAAGTTATTTTGAAGAGACAATGGGTCTCTTTGAGC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCAATTCTATGAGCATTTaGAGTGTTCACAGACATGTG +
Preference number: 3 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCNSMSI*SVHRHV
Trigger: CACATGTCTGTGAACACTCAAAATGCTCATAGAATT...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGGACTACCCTTGAGTTaGCTAATTTATCATCATCTT +
Preference number: 3 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSGLPLS*LIYHHL
Trigger: AAGATGATGATAAATTAGCAAACTCAAGGGTAGTCC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGACTACCCTTGAGTTaGCTAATTTATCATCATCTT +
Preference number: 3 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGGLPLS*LIYHHL
Trigger: AAGATGATGATAAATTAGCAAACTCAAGGGTAGTCC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATGGTGGTTTGAGAAACTaGTTACATGCTTTCATTGAA +
Preference number: 3 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHGGLRN*LHAFIE
Trigger: TTCAATGAAAGCATGTAACAAGTTTCTCAAACCACC...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR TCA 72 bp TCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: SSVKHRRTLDTQ*IAKERSTCQCV
Trigger: AACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp AGCTCTATTCTAAACTCAAGGAGTTCAGAAAGGCTGTaGCAGCCAGTAAGTAAAGTTGGACCTTTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SSILNSRSSERL*QPVSKVGPLVF
Trigger: GAAGACCAAAGGTCCAACTTTACTTACTGGCTGGCACAGCCTTTCTGAACTCCTTGAGTTTAGAATAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp TCAATACACAGAAACTTAAAGGCTAAACTCGCTGGGTaGCCCAGCTTCCTTTCAAATCAGGCACACAAATGT +
Preference number: 3 (lower is better)
Translates to: SIHRNLKAKLAG*PSFLSNQAHKC
Trigger: ACATTTGTGTGCCTGATTTGAAAGGAAGCTGGGGCACCCAGCGAGTTTAGCCTTTAAGTTTCTGTGTATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: RIQKLTVAGALISLQTLRLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGGACACCTCTTAAAATaGCTAGCTCCTGGAATGTCT +
Preference number: 3 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYGHLLK*LAPGMS
Trigger: AGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: INCGRCTDKPPDSESFICFHQVT*EGHLLK
Trigger: TTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAAAAGTAGGAAATGGTTaGATGCCTGACTATAAGTCA +
Preference number: 3 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTKVGNG*MPDYKS
Trigger: TGACTTATAGTCAGGCATCAAACCATTTCCTACTTT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp GATGCAGCACCCTTACCTAATAGTAAGGTGCAGATGTaGAGAAATCCACATGCTTCCCTAAAGAAGATAGAG +
Preference number: 3 (lower is better)
Translates to: DAAPLPNSKVQM*RNPHASLKKIE
Trigger: CTCTATCTTCTTTAGGGAAGCATGTGGATTTCTTCACATCTGCACCTTACTATTAGGTAAGGGTGCTGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp TACTTAGACTGGACTTACGCCCTTTTCTATCCAACATaGGAATTTCCACCAGTGGTCTCTGCATTTACTACT +
Preference number: 3 (lower is better)
Translates to: YLDWTYALFYPT*EFPPVVSAFTT
Trigger: AGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAGTCTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp CCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATaGGGGAAAATCTACTTAATAGTCCCTGTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: PSSEHRLQEPRG*GKIYLIVPVSN
Trigger: ATTTGAAACAGGGACTATTAAGTAGATTTTCCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCCTGGCAGTTCTGGTTTaGGAACTGATCCCAGAATTC +
Preference number: 3 (lower is better)
Translates to: NISHCIKCFKGTTGFELCLAVLV*ELIPEF
Trigger: GAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAG...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCATCTTCAACTGTTGTaGGAACTGGACATGTTGACA +
Preference number: 3 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIHLQLL*ELDMLT
Trigger: TGTCAACATGTCCAGTTCCAACAACAGTTGAAGATG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAGGGGGTGGAGTTCTATaGGCAGAGGAATCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: IMELSVSFYREEVRKLQQGGGVL*AEESEA
Trigger: AGCTTCAGATTCCTCTGCCAATAGAACTCCACCCCC...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAATGCAGGAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: IMELSVSFYREEVRKLQQMQENH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCAT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp TTTCAAAGCTCCGTTTCATATAGGCTGATTGTTCTCTaGAGCCAGATGGAATTCCATCCAATTCAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: FQSSVSYRLIVL*SQMEFHPIQSS
Trigger: AGAGCTCTGAATTGGATGGAATTCCATCTGGCTTCAGAGAACAATCAGCCTATATGAAACGGAGCTTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp AGTGGAGATAATAGGTGCAACCTTACAGGGCTATTGTaGGGATTAAACTTATGTAAAGCACCCAGCCTAATG +
Preference number: 3 (lower is better)
Translates to: SGDNRCNLTGLL*GLNLCKAPSLM
Trigger: CATTAGGCTGGGTGCTTTACATAAGTTTAATCCTCACAATAGCCCTGTAAGGTTGCACCTATTATCTCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR GCA 72 bp TCCAACCCTTTGAAAGGAAGCACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGACATTACTTGTATGCAT +
Preference number: 3 (lower is better)
Translates to: SNPLKGSTLANG*LLSPSDITCMH
Trigger: ATGCATACAAGTAATGTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGTGCTTCCTTTCAAAGGGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp AGTTCTGGTTTTGGAACTGATCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTAAAATGGCTGTTAGTA +
Preference number: 3 (lower is better)
Translates to: SSGFGTDPRILP*RLGDLLKWLLV
Trigger: TACTAACAGCCATTTTAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAATCTATTCTTCTCACTaGGGCAGAAGATGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKIYSSH*GRRWKQ
Trigger: CTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGAT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 3 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTA +
Preference number: 3 (lower is better)
Translates to: IMELSVSFYREEVRKLQQATLAM*VSQILL
Trigger: TAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGC...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACTGGTCACTACTACAATaGACAATAGAGGACCCCAAT +
Preference number: 3 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYWSLLQ*TIEDPN
Trigger: ATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCA...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTCCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 3 (lower is better)
Translates to: INCGRCTDKPPDSESFICPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTCCTTTTCTCTGATTTaGGCTGATTTATGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSFSLI*ADLCVC
Trigger: ACACACACATAAATCAGCCAAAATCAGAGAAAAGGA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGGTTACCTTTTAATGTaGGCTGACAAATGTATGAAC +
Preference number: 3 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYGYLLM*ADKCMN
Trigger: GTTCATACATTTGTCAGCCAACATTAAAAGGTAACC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR CCA 72 bp AGCCTTAATTATCTGATGGCAAAAACCACGATACTCTaGTCACTACTACAATTGACAATAGAGGACCCCAAT +
Preference number: 3 (lower is better)
Translates to: SLNYLMAKTTIL*SLLQLTIEDPN
Trigger: ATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTTTGCCATCAGATAATTAAGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp AGAATTCTACCTTGCAGGCTAGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAATAGTGCATGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: RILPCRLGDLLK*LLVASNSAWWK
Trigger: TTTCCACCATGCACTATTACTAGCTACTAACAGCCATTTTAAGAGATCTCCTAGCCTGCAAGGTAGAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 3 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp AGAAAGTCTAAATTATGCACCAGAGCCTTAATTATCTaGTGGCAAAAACCACGATACTCTGGTCACTACTAC +
Preference number: 3 (lower is better)
Translates to: RKSKLCTRALII*WQKPRYSGHYY
Trigger: GTAGTAGTGACCAGAGTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCTGGTGCATAATTTAGACTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp TTGGGGAAAACTGATTGGAGTAATTCCTTATTTATCTaGAAGCATATGCCTAGTCTTGACCCACTAGGACTT +
Preference number: 3 (lower is better)
Translates to: LGKTDWSNSLFI*KHMPSLDPLGL
Trigger: AAGTCCTAGTGGGTCAAGACTAGGCATATGCTTTCAGATAAATAAGGAATTACTCCAATCAGTTTTCCCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR GCA 72 bp ATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTATACAATCTCAGTGCT +
Preference number: 3 (lower is better)
Translates to: IKCFKGTTGFEL*SSMQGLYNLSA
Trigger: AGCACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp TTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGGTTCATTAAAACTCTT +
Preference number: 3 (lower is better)
Translates to: FLSNMGISTSGL*IYYCGRFIKTL
Trigger: AAGAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp GTGACAAAAGGGCATATCACATTTAGATACTTAGACTaGACTTACGCCCTTTTCTATCCAACATGGGAATTT +
Preference number: 3 (lower is better)
Translates to: VTKGHITFRYLD*TYALFYPTWEF
Trigger: AAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAATGTGATATGCCCTTTTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGAACAGCGATACTGTTaGGTGATACTAGATATTAGA +
Preference number: 3 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKEQRYC*VILDIR
Trigger: TCTAATATCTAGTATCACCAAACAGTATCGCTGTTC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACATCTTCAACTGTTGTaGGAACTGGACATGTTGACA +
Preference number: 3 (lower is better)
Translates to: IMELSVSFYREEVRKLQQHLQLL*ELDMLT
Trigger: TGTCAACATGTCCAGTTCCAACAACAGTTGAAGATG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACGGTTACCTTTTAATGTaGGCTGACAAATGTATGAAC +
Preference number: 3 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYGYLLM*ADKCMN
Trigger: GTTCATACATTTGTCAGCCAACATTAAAAGGTAACC...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
3UTR TCA 72 bp CCCAATGTTTGTGAAAGTCCAAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAATTTTCTCACATGATT +
Preference number: 3 (lower is better)
Translates to: PNVCESPKSVRL*NRWYSEFSHMI
Trigger: AATCATGTGAGAAAATTCAGAATACCATCTGTTTCATAGCCGCACAGATTTTGGACTTTCACAAACATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR TCA 72 bp AAAGTAGGAAATGGTTTGATGCCTGACTATAAGTCATaGGCCACTGGGATCAAATTTCACAAGAACTTCAAA +
Preference number: 3 (lower is better)
Translates to: KVGNGLMPDYKS*ATGIKFHKNFK
Trigger: TTTGAAGTTCTTGTGAAATTTGATCCCAGTGGCTCATGACTTATAGTCAGGCATCAAACCATTTCCTACTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR GCA 72 bp ATGTATGAAAAGAATACAGAAATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGACTCTGAGAGTTTTATT +
Preference number: 3 (lower is better)
Translates to: MYEKNTEINCGR*TDKPPDSESFI
Trigger: AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCTTTTCATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CCA 72 bp TTCTTAAAGCATTCACCATTACAACAAGCAGAACAATaGAGTATTAGCCATTCATATCTGGTAAGCTTCAGG +
Preference number: 3 (lower is better)
Translates to: FLKHSPLQQAEQ*SISHSYLVSFR
Trigger: CCTGAAGCTTACCAGATATGAATGGCTAATACTCCATTGTTCTGCTTGTTGTAATGGTGAATGCTTTAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACTCCTTTTCTCTGATTTaGGCTGATTTATGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYSFSLI*ADLCVC
Trigger: ACACACACATAAATCAGCCAAAATCAGAGAAAAGGA...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGGCTGCAGCGGCGGCTaGTACTCAAGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGGCSGG*YSRGGA
Trigger: CGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATCGGAGGAGGCGGAGCTaGAGCAGCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHRRRRS*SSPWRG
Trigger: GCCCCGCCATGGGCTGCTGCAGCTCCGCCTCCTCCG...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGAGCTGCAGCAGCCCATaGCGGGGCCGAAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKSCSSP*RGRRSP
Trigger: CGGGCTCCTTCGGCCCCGCCATGGGCTGCTGCAGCT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACGGAGGAGGCGGAGCTaGAGCAGCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVRRRRS*SSPWRG
Trigger: GCCCCGCCATGGGCTGCTGCAGCTCCGCCTCCTCCG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCGGAGGAGGCGGAGCTaGAGCAGCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNRRRRS*SSPWRG
Trigger: GCCCCGCCATGGGCTGCTGCAGCTCCGCCTCCTCCG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTCGGCTACGCGTCTCCTaGTCTGCTCCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSRLRVS*SAPAAA
Trigger: TGCTGCAGCAGGAGCAGAGCAGGAGACGCGTAGCCG...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGGCTGCAGCGGCGGCTaGTACTCAAGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVGCSGG*YSRGGA
Trigger: CGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSASILV*SSARRR
Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGCCATGGTATGTCTGTaGAGCTACGGTCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPAMVCL*SYGPPA
Trigger: CGCTGGAGGACCGTAGCTGCACAGACATACCATGGC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAACGCGTCTCCTGCTCTaGTCCTGCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHETRLLL*SCCSSC
Trigger: GCAGCTGCTGCAGCAGGAGCAGAGCAGGAGACGCGT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGGCTGCAGCGGCGGCTaGTACTCAAGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIGCSGG*YSRGGA
Trigger: CGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRASILV*SSARRR
Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTCTAGGAGTGTGGGGTaGGGTAGGGGGCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGSRSVG*GRGLTF
Trigger: AAAAGTCAGCCCCCTACCCCACCCCACACTCCTAGA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTCGACAGACCCAGCCTaGACAAGAATTTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSSTDPA*TRISLG
Trigger: CCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGGTTCAAGCAGAACTTaGTCCCGAAGCCATCGGCTT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGGSSRT*SRSHRL
Trigger: AAGCCGATGGCTTCGGGAGCAAGTTCTGCTTGAACC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGGCTGCAGCGGCGGCTaGTACTCAAGAGGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESGCSGG*YSRGGA
Trigger: CGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEASILV*SSARRR
Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGTCGGCTTTAGCTCTCTaGAATCAGCGACGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRSALAL*NQRRLP
Trigger: AGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGCCGA...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAAAGCCTTGCTCATTCTaGACAGGACTGCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPKPCSF*TGLPVV
Trigger: CACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTT...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGCTGGGTGTGGTCCATaGCACTGTTTGGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGAGCGP*HCLVLL
Trigger: AAGCAATACCAAACAGTGGCATGGACCACACCCAGC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTTGCCTTGGACACGCTaGTACACACAGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGLPWTR*YTQCYR
Trigger: TCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTGTTACCACAGCTCCTaGCACTGTCATCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGCYHSS*HCHLLT
Trigger: TGTCAGCAGATGACAGTGGCAGGAGCTGTGGTAACA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTCCCAGCTAAACCTGTaGTGCAGACTATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGSQLNL*CRLSAP
Trigger: AGGTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAGAAGAGCAGCAGCCATaGTATGTCTGTGCAGCTACG +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPEEQQP*YVCAAT
Trigger: CGTAGCTGCACAGACATACCATGGCTGCTGCTCTTC...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCATACTTCCGCTGGGTGTaGTCCATGCCACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPYFRWV*SMPLFG
Trigger: ACCAAACAGTGGCATGGACCACACCCAGCGGAAGTA...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGATCAGGCCCACCACATaGTACCACCACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRIRPTT*YHHMYC
Trigger: GCAGTACATGTGGTGGTACCATGTGGTGGGCCTGAT...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCAATGCAGAAGAGGATaGAGAGCAGCAGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSQCRRG*RAAAMV
Trigger: TACCATGGCTGCTGCTCTTCATCCTCTTCTGCATTG...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGACCTGTGCCTCCAAGTaGACCGAGTATGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRTCASK*TEYDQN
Trigger: ATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGT...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAAGCCTTGCTCATTCTaGACAGGACTGCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGKPCSF*TGLPVV
Trigger: CACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCAGGAACAACTGGCTTTaGGCTCTGCTCATCCATGCA +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPRNNWL*ALLIHA
Trigger: TGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCT...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTAGGTGGAGGTTGCAGTaGGCTAAGATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSRWRLQ*AKIEPL
Trigger: CAGTGGCTCAATCTTAGCTCACTGCAACCTCCACCT...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTTGCAGGAGAATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSCRRIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCA...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAACTCTCAACAGCTGGTaGGTGGGAGAACCTCATGTA +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPTLNSW*VGEPHV
Trigger: TACATGAGGTTCTCCCACTCACCAGCTGTTGAGAGT...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCGGAGGAGGCGGAGCTaGAGCAGCCCATGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSRRRRS*SSPWRG
Trigger: GCCCCGCCATGGGCTGCTGCAGCTCCGCCTCCTCCG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTTGCCTTGGACACGCTaGTACACACAGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSLPWTR*YTQCYR
Trigger: TCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGAAGAGCAGCAGCCATaGTATGTCTGTGCAGCTACG +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSEEQQP*YVCAAT
Trigger: CGTAGCTGCACAGACATACCATGGCTGCTGCTCTTC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAAATACATACTTCCGCTaGGTGTGGTCCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPNTYFR*VWSMPL
Trigger: CAGTGGCATGGACCACACCCAGCGGAAGTATGTATT...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCACAGCGATGGAAGAATaGAATAGGTGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSTAMEE*NRCTRW
Trigger: CCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGT...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTTACAGGGGTGGAAGCTaGCCGTCTGAGGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCYRGGS*PSEGPE
Trigger: TTCAGGGCCCTCAGACGGCCAGCTTCCACCCCTGTA...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGTATCACCCCATATGCTaGGCTGGGCTTGACACTGGA +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKYHPIC*AGLDTG
Trigger: TCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATA...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCGAACAAGAATTTCGCTaGGGATCTAGCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSEQEFR*GSSLQA
Trigger: GGCCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTC...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCACCTGTGCCTCCAAGTaGACCGAGTATGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCTCASK*TEYDQN
Trigger: ATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGT...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGACCTGTGCCTCCAAGTaGACCGAGTATGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKTCASK*TEYDQN
Trigger: ATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTTGTCTTCAGCTATCTaGAGCTGCTCAGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGLSSAI*SCSGVT
Trigger: TGTTACTCCTGAGCAGCTTCAGATAGCTGAAGACAA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTGAAATGGCATAAATaGGGAGGGCCCGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSLKWHK*GGPEDC
Trigger: ACAATCTTCGGGCCCTCCTCATTTATGCCATTTCAG...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACTAGCAGTGGCAAGTaGATGAAGACCTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHTSSGK*MKTLPA
Trigger: AGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGT...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHKGILC*GAEVGA
Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTT...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGKGILC*GAEVGA
Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACACAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTQRGRR*SEAAPI
Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCCAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFQRGRR*SEAAPI
Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGAGAAGATGGAAGCAGTaGGCGAATAGCAATAAGGCA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGRRWKQ*ANSNKA
Trigger: TGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCT...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAGGTGGAGGTTGCAGTaGGCTAAGATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHERWRLQ*AKIEPL
Trigger: CAGTGGCTCAATCTTAGCTCACTGCAACCTCCACCT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCCCAAAAACCAAGTTCTaGGCACAGACTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPPKTKF*AQTTGT
Trigger: GGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGG...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGCCCTACTGTATTGACTaGTCTTTAAATTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGPYCID*SLNLAA
Trigger: GGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGG...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGGTAAACAACCTCCTCTaGGTTCATTCTTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRVNNLL*VHSSGL
Trigger: GAGCCCTGAAGAATGAACTCAGAGGAGGTTGTTTAC...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGCTGGGTGTGGTCCATaGCACTGTTTGGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSAGCGP*HCLVLL
Trigger: AAGCAATACCAAACAGTGGCATGGACCACACCCAGC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCACGCTGCTACACACAGTaGTACAGACTTAATCTTCCG +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPRCYTQ*YRLNLP
Trigger: CGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCG...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTGDQGL*KLGIAG
Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATTGTTACCACAGCTCCTaGCACTGTCATCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHCYHSS*HCHLLT
Trigger: TGTCAGCAGATGACAGTGGCAGGAGCTGTGGTAACA...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCAGCTAAACCTGTGCTaGAGACTATCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGQLNLC*RLSAPC
Trigger: GCAAGGTGCTGATAGTCTGCAGCACAGGTTTAGCTG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATTCCCAGCTAAACCTGTaGTGCAGACTATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHSQLNL*CRLSAP
Trigger: AGGTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGA...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGGTTCAAGCAGAACTTaGTCCCGAAGCCATCGGCTT +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEGSSRT*SRSHRL
Trigger: AAGCCGATGGCTTCGGGAGCAAGTTCTGCTTGAACC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR GCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAACGCGTCTCCTGCTCTaGTCCTGCTGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRTRLLL*SCCSSC
Trigger: GCAGCTGCTGCAGCAGGAGCAGAGCAGGAGACGCGT...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCCGGCTACGCGTCTCCTaGTCTGCTCCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESRLRVS*SAPAAA
Trigger: TGCTGCAGCAGGAGCAGAGCAGGAGACGCGTAGCCG...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCGGCTACGCGTCTCCTaGTCTGCTCCTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLRLRVS*SAPAAA
Trigger: TGCTGCAGCAGGAGCAGAGCAGGAGACGCGTAGCCG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAATACATACTTCCGCTaGGTGTGGTCCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGNTYFR*VWSMPL
Trigger: CAGTGGCATGGACCACACCCAGCGGAAGTATGTATT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGAATACATACTTCCGCTaGGTGTGGTCCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKNTYFR*VWSMPL
Trigger: CAGTGGCATGGACCACACCCAGCGGAAGTATGTATT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRTGAQR*KNGIGA
Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRGPLQT*HSRKCS
Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGACCTTGCCAGCTACGTaGAACAAGGCGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGTLPAT*NKAMVR
Trigger: TCTTACCATCGCCTTGTTCCACGTAGCTGGCAAGGT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGGGGTGGAGTTCTATTaGCAGAGGAATCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRGVEFY*QRNLKL
Trigger: CAGCTTCAGATTCCTCTGCCAATAGAACTCCACCCC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCTGAAATGGCATAAATaGGGAGGGCCCGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGLKWHK*GGPEDC
Trigger: ACAATCTTCGGGCCCTCCTCATTTATGCCATTTCAG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAACTAGCAGTGGCAAGTaGATGAAGACCTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHETSSGK*MKTLPA
Trigger: AGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTKGILC*GAEVGA
Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTTTAGAGCAGCCTTTTaGCTTGGGTTCATTAGCCCC +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGFRAAF*LGFISP
Trigger: GGGGCTAATGAACCCAAGTCAAAAGGCTGCTCTAAA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGTTTAGAGCAGCCTTTTaGCTTGGGTTCATTAGCCCC +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKFRAAF*LGFISP
Trigger: GGGGCTAATGAACCCAAGTCAAAAGGCTGCTCTAAA...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGCCTGGCCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCAWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCCAGCTAAACCTGTGCTaGAGACTATCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFQLNLC*RLSAPC
Trigger: GCAAGGTGCTGATAGTCTGCAGCACAGGTTTAGCTG...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPTGFEL*SSMQGL
Trigger: TAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGT...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTAATAATCTGGTACCTTaGCCCCAAATAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSNNLVP*PQITAR
Trigger: CCTGGCGGTTATTTGGGGGCAAGGTACCAGATTATT...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGAATAATCTGGTACCTTaGCCCCAAATAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKNNLVP*PQITAR
Trigger: CCTGGCGGTTATTTGGGGGCAAGGTACCAGATTATT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGGAACCCATTCTATCTaGCCAATTATTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGGTHSI*PIIPKS
Trigger: AGACTTGGGAATAATTGGGCAGATAGAATGGGTTCC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAACAGCGATGGAAGAATaGAATAGGTGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHETAMEE*NRCTRW
Trigger: CCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGTGAQR*KNGIGA
Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAACCTTGCCAGCTACGTaGAACAAGGCGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHETLPAT*NKAMVR
Trigger: TCTTACCATCGCCTTGTTCCACGTAGCTGGCAAGGT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCAAAGTCCAGAAGGGTTaGAAGACTAGCAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCKVQKG*KTSSGK
Trigger: CTTGCCACTGCTAGTCTTCCAACCCTTCTGGACTTT...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGTCGGCTTTAGCTCTCTaGAATCAGCGACGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSSALAL*NQRRLP
Trigger: AGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGCCGA...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGTTTTGGAATGTCAATaGGTTTCCATAACCGTCGGC +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPVLECQ*VSITVG
Trigger: GCCGACGGTTATGGAAACCCATTGACATTCCAAAAC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAGGCAAGGAAGCCCTTaGCAGATACCAAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHERQGSP*QIPRSV
Trigger: CACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTGTGAACACTGTAGCTaGAATGGCATAAATGAGGAG +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSCEHCS*NGINEE
Trigger: CTCCTCATTTATGCCATTTCAGCTACAGTGTTCACA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGCAGTGGCAAGTGAATaGAGACCTTGCCAGCTACGT +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVAVASE*RPCQLR
Trigger: ACGTAGCTGGCAAGGTCTTCATTCACTTGCCACTGC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGCAGTGGCAAGTGAATaGAGACCTTGCCAGCTACGT +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCAVASE*RPCQLR
Trigger: ACGTAGCTGGCAAGGTCTTCATTCACTTGCCACTGC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGAAGCCTTGCTCATTCTaGACAGGACTGCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSKPCSF*TGLPVV
Trigger: CACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVQRGRR*SEAAPI
Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGATAGACAGGAAGCAATaGGCGACTAGGAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKIDRKQ*ATRKAK
Trigger: CTTTGCTTTCCTAGTCGCTCATTGCTTCCTGTCTAT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGATAGACAGGAAGCAATaGGCGACTAGGAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGIDRKQ*ATRKAK
Trigger: CTTTGCTTTCCTAGTCGCTCATTGCTTCCTGTCTAT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGAGCAGCAACAGTCCATaGTGCAGGGATGTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSSSNSP*CRDVQV
Trigger: CACTTGGACATCCCTGCATCATGGACTGTTGCTGCT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCATGGTGGAAATAGTTaGAGCCTCAGGGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFHGGNS*SLRGSD
Trigger: ATCACTGCCCCTGAGGCTTCAACTATTTCCACCATG...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGCCTGGCCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYAWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGCCTGGCCAACGTGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIAWPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCACGTTGGCCAGGC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGTGGCTGTTGGTGGTTTaGGAAACTTGTTACATGCTT +
Preference number: 4 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRWLLVV*ETCYML
Trigger: AAGCATGTAACAAGTTTCTCAAACCACCAACAGCCA...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTTGGGAGACCTTCTTTaGTTTGCATACAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCLGDLL*FAYSHH
Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCTTAAATGACGGAAGTTaGCTTGTAAAAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPLNDGS*LVKATR
Trigger: ACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAA...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR GCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGPRILP*RLGDLL
Trigger: TAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTCTACCTTCAGCATCTaGTCCTCCAACTTTCTACCA +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCSTFSI*SSNFLP
Trigger: TGGTAGAAAGTTGGAGGAGCAGATGCTGAAGGTAGA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGAAGCCCCTGTCATTTTaGTTGATGCCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRKPLSF*LMPFTL
Trigger: AAGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTTCATATCACCCCATATaGTGGGCTGGGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFSYHPI*WAGLDT
Trigger: AGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGA...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGCCACATTACACAGCTaGGAGAAATCAAGACACACC +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEATLHS*EKSRHT
Trigger: GGTGTGTCTTGATTTCTCGCAGCTGTGTAATGTGGC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCGCTTCCATTCTCGTTTaGAGCTCTGCGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCASILV*SSARRR
Trigger: CCTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGC...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGGAAGAGCAGCAGCCATaGTATGTCTGTGCAGCTACG +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSEEQQP*YVCAAT
Trigger: CGTAGCTGCACAGACATACCATGGCTGCTGCTCTTC...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGAAGAGCAGCAGCCATaGTATGTCTGTGCAGCTACG +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCEEQQP*YVCAAT
Trigger: CGTAGCTGCACAGACATACCATGGCTGCTGCTCTTC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTATACTTCCGCTGGGTGTaGTCCATGCCACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVYFRWV*SMPLFG
Trigger: ACCAAACAGTGGCATGGACCACACCCAGCGGAAGTA...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACATTTCAGTTCTTGCCTTaGACACGCTGCTACACACAG +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTFQFLP*TRCYTQ
Trigger: CTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAA...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCTTTCAGTTCTTGCCTTaGACACGCTGCTACACACAG +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFFQFLP*TRCYTQ
Trigger: CTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAA...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCTGGAACTGGTAGTTTaGGGCAGAGAACAGAAGATT +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGLELVV*GREQKI
Trigger: AATCTTCTGTTCTCTGCCCCAAACTACCAGTTCCAG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHETGAQR*KNGIGA
Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAACAGGAGCACAGCGATaGAAGAATGGAATAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTTGAQR*KNGIGA
Trigger: TGCACCTATTCCATTCTTCCATCGCTGTGCTCCTGT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEGPLQT*HSRKCS
Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAAAGTCCAGAAGGGTTaGAAGACTAGCAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEKVQKG*KTSSGK
Trigger: CTTGCCACTGCTAGTCTTCCAACCCTTCTGGACTTT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCAAAGTCCAGAAGGGTTaGAAGACTAGCAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFKVQKG*KTSSGK
Trigger: CTTGCCACTGCTAGTCTTCCAACCCTTCTGGACTTT...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAATCAGGCCCACCACATaGTACCACCACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRIRPTT*YHHMYC
Trigger: GCAGTACATGTGGTGGTACCATGTGGTGGGCCTGAT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTATCAGGCCCACCACATaGTACCACCACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCIRPTT*YHHMYC
Trigger: GCAGTACATGTGGTGGTACCATGTGGTGGGCCTGAT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTCGGCTTTAGCTCTCTaGAATCAGCGACGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSALAL*NQRRLP
Trigger: AGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGCCGA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTGCTCTAAAGCAGTTTaGGTCCAGAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGCSKAV*VQNKGV
Trigger: GACCCCTTTATTCTGGACCCAAACTGCTTTAGAGCA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACTACAGGGGTGGAAGCTaGCCGTCTGAGGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYYRGGS*PSEGPE
Trigger: TTCAGGGCCCTCAGACGGCCAGCTTCCACCCCTGTA...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTACAGGGGTGGAAGCTaGCCGTCTGAGGGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCYRGGS*PSEGPE
Trigger: TTCAGGGCCCTCAGACGGCCAGCTTCCACCCCTGTA...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAGTAAGGGACTGGGGGTaGAGTTCTATTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVVRDWG*SSIGRG
Trigger: TCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTAC...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTTCTAGGAGTGTGGGGTaGGGTAGGGGGCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFISRSVG*GRGLTF
Trigger: AAAAGTCAGCCCCCTACCCCACCCCACACTCCTAGA...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTTATCACCCCATATGCTaGGCTGGGCTTGACACTGGA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCYHPIC*AGLDTG
Trigger: TCCAGTGTCAAGCCCAGCCCAGCATATGGGGTGATA...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGCCAATTCAGAGCTCTTaGAAGTTAATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGPIQSS*KLISQQ
Trigger: TTGCTGGGAAATTAACTTCCAAGAGCTCTGAATTGG...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGCCACACAAGTACTCTTaGTATATACCTGATTATCAC +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGPHKYS*YIPDYH
Trigger: GTGATAATCAGGTATATATCAAGAGTACTTGTGTGG...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCTTGTCTTCAGCTATCTaGAGCTGCTCAGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFLSSAI*SCSGVT
Trigger: TGTTACTCCTGAGCAGCTTCAGATAGCTGAAGACAA...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGAAAAAGAAGTGTCATaGTCCAGTACACCCAAAACA +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPEKEVS*SSTPKT
Trigger: TGTTTTGGGTGTACTGGATCATGACACTTCTTTTTC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAGCCTTGCTCATTCTaGACAGGACTGCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIKPCSF*TGLPVV
Trigger: CACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTT...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRKGILC*GAEVGA
Trigger: AGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCAAAGAGGCAGACGATaGTCAGAGGCAGCACCCATA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNQRGRR*SEAAPI
Trigger: TATGGGTGCTGCCTCTGATCATCGTCTGCCTCTTTG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAACCACTGACGTTACTCTaGAGCCGAAGCCCAAGCACC +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKPLTLL*SRSPST
Trigger: GGTGCTTGGGCTTCGGCTTCAGAGTAACGTCAGTGG...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTAGCAGCAACAGTCCATaGTGCAGGGATGTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFISSNSP*CRDVQV
Trigger: CACTTGGACATCCCTGCATCATGGACTGTTGCTGCT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTATACCCCCTACTAGGGTaGAATCCTAAAACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVYPLLG*NPKTAQ
Trigger: CTGGGCAGTTTTAGGATTTCACCCTAGTAGGGGGTA...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGACATGGTGGAAATAGTTaGAGCCTCAGGGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRHGGNS*SLRGSD
Trigger: ATCACTGCCCCTGAGGCTTCAACTATTTCCACCATG...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRFWFWN*SQNSTL
Trigger: CAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGAAAGCTTTATTATTCTaGGCTCCGTGTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGKALLF*APCPGE
Trigger: TTCTCCAGGACACGGAGCTCAGAATAATAAAGCTTT...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACACCCTACTGTATTGACTaGTCTTTAAATTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTPYCID*SLNLAA
Trigger: GGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGG...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAGGCTGATTGTTCTCTaGAGCCAGATGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHERLIVL*SQMEFH
Trigger: ATGGAATTCCATCTGGCTTCAGAGAACAATCAGCCT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCGCTGCTACACACAGTaGTACAGACTTAATCTTCCG +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFRCYTQ*YRLNLP
Trigger: CGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCG...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTATTGCCTTGGACACGCTaGTACACACAGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVLPWTR*YTQCYR
Trigger: TCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAA...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYGDQGL*KLGIAG
Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIGDQGL*KLGIAG
Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAATACCACCACATGTACTaGAGAGGCCCAGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEYHHMY*RGPEIL
Trigger: CAAAATTTCTGGGCCTCTGCAGTACATGTGGTGGTA...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGTGTTACCACAGCTCCTaGCACTGTCATCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVCYHSS*HCHLLT
Trigger: TGTCAGCAGATGACAGTGGCAGGAGCTGTGGTAACA...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCAGCTAAACCTGTGCTaGAGACTATCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCQLNLC*RLSAPC
Trigger: GCAAGGTGCTGATAGTCTGCAGCACAGGTTTAGCTG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGTCCCAGCTAAACCTGTaGTGCAGACTATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVSQLNL*CRLSAP
Trigger: AGGTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGA...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTAAGGAGAGGAGCACCTaGCAGTGTGTTTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFKERST*QCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGTGAAGAAATCCACATaGTTCCCTAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGVKKST*FPKEDR
Trigger: TCTATCTTCTTTAGGGAAGCATGTGGATTTCTTCAC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACCCTTGATGAGTTTCTaGCTGCTTTTTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVPLMSF*LLFQGP
Trigger: GGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFGPLQT*HSRKCS
Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGGCAAGGAAGCCCTTaGCAGATACCAAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCRQGSP*QIPRSV
Trigger: CACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTCAAGTCACCATTACTaGCAGTTCTGGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCSSHHY*QFWFWN
Trigger: GTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGCTGAGCTCCGTGTCCTaGAGAAAATCATTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGLSSVS*RKSFKL
Trigger: CAACTTAAATGATTTTCTCCAGGACACGGAGCTCAG...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGGGGTGGAGTTCTATTaGCAGAGGAATCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVGVEFY*QRNLKL
Trigger: CAGCTTCAGATTCCTCTGCCAATAGAACTCCACCCC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGGGGGTGGAGTTCTATTaGCAGAGGAATCTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSGVEFY*QRNLKL
Trigger: CAGCTTCAGATTCCTCTGCCAATAGAACTCCACCCC...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGCTTTTCTATCCAACATaGGAATTTCCACCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKLFYPT*EFPPVV
Trigger: GACCACTGGTGGAAATTCCCATGTTGGATAGAAAAG...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATCCACTTGGCTGTTGGTaGTTTGAGAAACTTGTTACA +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHPLGCW*FEKLVT
Trigger: TGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGG...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR CAA 72 bp CCACTGGGATCAAATTTCACAAGAACTTCAAACCCCTaGATGAGTTTCTGCCTGCTTTTTCAAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PLGSNFTRTSNP*MSFCLLFQGPR
Trigger: CCTGGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCTTGTGAAATTTGATCCCAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCTGAAATGGCATAAATaGGGAGGGCCCGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCLKWHK*GGPEDC
Trigger: ACAATCTTCGGGCCCTCCTCATTTATGCCATTTCAG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAGCAGTGGCAAGTGAATaGAGACCTTGCCAGCTACGT +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRAVASE*RPCQLR
Trigger: ACGTAGCTGGCAAGGTCTTCATTCACTTGCCACTGC...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTACTAGCAGTGGCAAGTaGATGAAGACCTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFITSSGK*MKTLPA
Trigger: AGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAATGACATGGCTTCTTTaGTTGGGGAAAACTGATTGG +
Preference number: 4 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTMTWLL*LGKTDW
Trigger: CCAATCAGTTTTCCCCAATCAAAGAAGCCATGTCAT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR TCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATTAACCCTAAGCCACTaGCGTTACTCTGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRLTLSH*RYSEAE
Trigger: TTCGGCTTCAGAGTAACGTCAGTGGCTTAGGGTTAA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAGGAACAACTGGCTTTaGGCTCTGCTCATCCATGCA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNRNNWL*ALLIHA
Trigger: TGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTGCAGGAGAATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLCRRIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATTGCAGGAGAATCACTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDCRRIT*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCA...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCTTCATTTTGGCACTATaGAATAGGATGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPFILAL*NRMQMA
Trigger: TGCCATTTGCATCCTATTTCATAGTGCCAAAATGAA...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTAGGCTGATTGTTCTCTaGAGCCAGATGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFRLIVL*SQMEFH
Trigger: ATGGAATTCCATCTGGCTTCAGAGAACAATCAGCCT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGCTGGGTGTGGTCCATaGCACTGTTTGGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYAGCGP*HCLVLL
Trigger: AAGCAATACCAAACAGTGGCATGGACCACACCCAGC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGGTGATCAGGGCCTCTaGAAACTTGGCATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESGDQGL*KLGIAG
Trigger: TCCTGCTATGCCAAGTTTGCAGAGGCCCTGATCACC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCTTTCAGCACACATCGTaGACAAGCATTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFFQHTS*TSIFLS
Trigger: GGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAA...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAATTTCAGCACACATCGTaGACAAGCATTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEFQHTS*TSIFLS
Trigger: GGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAA...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCAAAGGCAACAAATaGAAGATTTCAGCACACATC +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHTKGNK*KISAHI
Trigger: GATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGT...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTTCCCAGCTAAACCTGTaGTGCAGACTATCAGCACCT +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFISQLNL*CRLSAP
Trigger: AGGTGCTGATAGTCTGCAGCACAGGTTTAGCTGGGA...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGAAGGAGAGGAGCACCTaGCAGTGTGTTTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVKERST*QCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVINCGR*TDKPPD
Trigger: GTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCCTTGATGAGTTTCTaGCTGCTTTTTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPLMSF*LLFQGP
Trigger: GGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACACAGCGATGGAAGAATaGAATAGGTGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYTAMEE*NRCTRW
Trigger: CCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCATCAGGCCCACCACATaGTACCACCACATGTACTGC +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLIRPTT*YHHMYC
Trigger: GCAGTACATGTGGTGGTACCATGTGGTGGGCCTGAT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTTCCTTCAGATTAGTGTaGTTTCTATTCCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSSFRLV*FLFPNL
Trigger: CAGGTTAGGGAATAGAAACCACACTAATCTGAAGGA...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTTTAGATACTTAGACTaGACTTACGCCCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGFRYLD*TYALFY
Trigger: ATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCCAGGAACCTAGAGGATaGGGGAAAATCTACTTAATA +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCQEPRG*GKIYLI
Trigger: TATTAAGTAGATTTTCCCCCATCCTCTAGGTTCCTG...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCGTAAAGTTGGACCTTTaGTCTTCAGAAGATAGGGTT +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCVKLDL*SSEDRV
Trigger: AACCCTATCTTCTGAAGACCAAAGGTCCAACTTTAC...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp CCTAATTTCCAAGTTCAGGACTTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PNFQVQDFHQVT*EGHLLKLLAPG
Trigger: TCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAAGTCCTGAACTTGGAAATTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp CAAGGAAGCCCTTGGCAGATACCAAGATCAGTGGTATaGGAAATAACTTACAATCAGCAGCCTAATGCCCTC +
Preference number: 4 (lower is better)
Translates to: QGSPWQIPRSVV*EITYNQQPNAL
Trigger: GAGGGCATTAGGCTGCTGATTGTAAGTTATTTCCAATACCACTGATCTTGGTATCTGCCAAGGGCTTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCAATGCAGAAGAGGATaGAGAGCAGCAGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLQCRRG*RAAAMV
Trigger: TACCATGGCTGCTGCTCTTCATCCTCTTCTGCATTG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATCCACACAAGTACTCTTaGTATATACCTGATTATCAC +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHPHKYS*YIPDYH
Trigger: GTGATAATCAGGTATATATCAAGAGTACTTGTGTGG...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCAAGTGAACCGAGTATaGCCAGAATCGTTAAGATCC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCQVNRV*PESLRS
Trigger: GGATCTTAACGATTCTGGTCATACTCGGTTCACTTG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCTGAAATGGCATAAATaGGGAGGGCCCGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYLKWHK*GGPEDC
Trigger: ACAATCTTCGGGCCCTCCTCATTTATGCCATTTCAG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTCTTTTGCGCCTCTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATCATTTTCCTTTCCTTTaGGCTGACTGTGAATATACA +
Preference number: 4 (lower is better)
Translates to: FFCASKDSLVLHLRHFPHHFPFL*ADCEYT
Trigger: TGTATATTCACAGTCAGCTCAAAGGAAAGGAAAATG...ATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGGCGCAAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCATTCTCCACCAGAATaGCAAAGGCATCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNHSPPE*QRHPLL
Trigger: CAGCAAAGGATGCCTTTGTCATTCTGGTGGAGAATG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTTTCTGGTTTTGGAACTaGTCCCAGAATTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFFWFWN*SQNSTL
Trigger: CAAGGTAGAATTCTGGGATCAGTTCCAAAACCAGAA...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGTAAGGTGCAGATGTaGAGAAATCCACATGCTTCC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCSKVQM*RNPHAS
Trigger: GGAAGCATGTGGATTTCTTCACATCTGCACCTTACT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTCCAAAAACCAAGTTCTaGGCACAGACTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICPKTKF*AQTTGT
Trigger: GGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGG...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCCAAAAACCAAGTTCTaGGCACAGACTACAGGAACC +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYPKTKF*AQTTGT
Trigger: GGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCCGTTTCATATAGGCTaGTTGTTCTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCPFHIG*LFSEAR
Trigger: TCTGGCTTCAGAGAACAATCAGCCTATATGAAACGG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGCCACTGTTTGGTATTaGTTCCAACTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPATVWY*FQLCIF
Trigger: AAAAATACAAAGTTGGAAGCAATACCAAACAGTGGC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCGCCACTGTTTGGTATTaGTTCCAACTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSATVWY*FQLCIF
Trigger: AAAAATACAAAGTTGGAAGCAATACCAAACAGTGGC...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAGCTGGGTGTGGTCCATaGCACTGTTTGGTATTGCTT +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRAGCGP*HCLVLL
Trigger: AAGCAATACCAAACAGTGGCATGGACCACACCCAGC...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTCGCTGCTACACACAGTaGTACAGACTTAATCTTCCG +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIRCYTQ*YRLNLP
Trigger: CGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCG...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTCGCTGCTACACACAGTaGTACAGACTTAATCTTCCG +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICRCYTQ*YRLNLP
Trigger: CGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCG...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTGTTACCACAGCTCCTaGCACTGTCATCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLCYHSS*HCHLLT
Trigger: TGTCAGCAGATGACAGTGGCAGGAGCTGTGGTAACA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFTLANG*LLSPSD
Trigger: GTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVTGFEL*SSMQGL
Trigger: TAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGT...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICINCGR*TDKPPD
Trigger: GTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 4 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKSKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCCCTTGATGAGTTTCTaGCTGCTTTTTCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDPLMSF*LLFQGP
Trigger: GGGCCCTTGAAAAAGCAGGCAGAAACTCATCAAGGG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSTSGL*IYYCGR
Trigger: CCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCCGATGTGTGTTTTCTaGTCATATCACCCCATATGC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCPMCVF*SYHPIC
Trigger: GCATATGGGGTGATATGAGCAGAAAACACACATCGG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAATACTTCCGCTGGGTGTaGTCCATGCCACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKYFRWV*SMPLFG
Trigger: ACCAAACAGTGGCATGGACCACACCCAGCGGAAGTA...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTTTCAGTTCTTGCCTTaGACACGCTGCTACACACAG +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICFQFLP*TRCYTQ
Trigger: CTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCTGGAACTGGTAGTTTaGGGCAGAGAACAGAAGATT +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSLELVV*GREQKI
Trigger: AATCTTCTGTTCTCTGCCCCAAACTACCAGTTCCAG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCACCTTGCCAGCTACGTaGAACAAGGCGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESTLPAT*NKAMVR
Trigger: TCTTACCATCGCCTTGTTCCACGTAGCTGGCAAGGT...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCACCTTGCCAGCTACGTaGAACAAGGCGATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLTLPAT*NKAMVR
Trigger: TCTTACCATCGCCTTGTTCCACGTAGCTGGCAAGGT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGTTTTGGAATGTCAATaGGTTTCCATAACCGTCGGC +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVVLECQ*VSITVG
Trigger: GCCGACGGTTATGGAAACCCATTGACATTCCAAAAC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAGGCAAGGAAGCCCTTaGCAGATACCAAGATCAGTG +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDRQGSP*QIPRSV
Trigger: CACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCTTTTCTATCCAACATaGGAATTTCCACCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFLFYPT*EFPPVV
Trigger: GACCACTGGTGGAAATTCCCATGTTGGATAGAAAAG...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTCTACAACTGTGTCTGTaGGGCATGTTCAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICLQLCL*GMFKHL
Trigger: TAGGTGCTTGAACATGCCCCACAGACACAGTTGTAG...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAATTCTCTGAAGCCAGATaGAATTCCATCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEFSEAR*NSIQFR
Trigger: TCTGAATTGGATGGAATTCCATCTGGCTTCAGAGAA...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAAAAACAATGTTAGTGTaGAGAGCTTTGGAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPKTMLV*RALELE
Trigger: TTCTAACTCCAAAGCTCTCCACACTAACATTGTTTT...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCCCTCTAAAGACTCCCTaGTCCTCCATCTCAGACACT +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESPLKTP*SSISDT
Trigger: AGTGTCTGAGATGGAGGACCAGGGAGTCTTTAGAGG...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
3UTR CAA 72 bp CAGTTAAACATCGTAGAACTCTGGATACTCAATGAATaGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: QLNIVELWILNE*PRRGAPASVFS
Trigger: TGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAACAATGCAGAAGAGGATaGAGAGCAGCAGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKQCRRG*RAAAMV
Trigger: TACCATGGCTGCTGCTCTTCATCCTCTTCTGCATTG...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTCAAGTGAACCGAGTATaGCCAGAATCGTTAAGATCC +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIQVNRV*PESLRS
Trigger: GGATCTTAACGATTCTGGTCATACTCGGTTCACTTG...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCAAGTGAACCGAGTATaGCCAGAATCGTTAAGATCC +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNQVNRV*PESLRS
Trigger: GGATCTTAACGATTCTGGTCATACTCGGTTCACTTG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAACCTGTGCCTCCAAGTaGACCGAGTATGACCAGAAT +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKTCASK*TEYDQN
Trigger: ATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATTTGTCTTCAGCTATCTaGAGCTGCTCAGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYLSSAI*SCSGVT
Trigger: TGTTACTCCTGAGCAGCTTCAGATAGCTGAAGACAA...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGCCACTGTCATCTGCTaGCATGCTAGAATAAATTCA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCATVIC*HARINS
Trigger: TGAATTTATTCTAGCATGTCAGCAGATGACAGTGGC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCATTCTCCACCAGAATaGCAAAGGCATCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDHSPPE*QRHPLL
Trigger: CAGCAAAGGATGCCTTTGTCATTCTGGTGGAGAATG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAATGACATGGCTTCTTTaGTTGGGGAAAACTGATTGG +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRMTWLL*LGKTDW
Trigger: CCAATCAGTTTTCCCCAATCAAAGAAGCCATGTCAT...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYAGMSK*VEPNFQ
Trigger: TTGGAAATTAGGTTCTACTCACTTGGACATCCCTGC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGCAGCAACAGTCCATaGTGCAGGGATGTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYSSNSP*CRDVQV
Trigger: CACTTGGACATCCCTGCATCATGGACTGTTGCTGCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAGAAGATGGAAGCAGTaGGCGAATAGCAATAAGGCA +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIRRWKQ*ANSNKA
Trigger: TGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCT...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGGCAGCCTACGCTGTaGATACAGAATACACAAATA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCRQPTL*IQNTQI
Trigger: TATTTGTGTATTCTGTATTCACAGCGTAGGCTGCCT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAGCTGCTCTAGTGGGTaGCTGGAAAACACTAAAACA +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYSCSSG*LENTKT
Trigger: TGTTTTAGTGTTTTCCAGTCACCCACTAGAGCAGCT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTAGTAAGGTGCAGATGTaGAGAAATCCACATGCTTCC +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFISKVQM*RNPHAS
Trigger: GGAAGCATGTGGATTTCTTCACATCTGCACCTTACT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAGTAAGGTGCAGATGTaGAGAAATCCACATGCTTCC +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYSKVQM*RNPHAS
Trigger: GGAAGCATGTGGATTTCTTCACATCTGCACCTTACT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACCTGACTATAAGTCATaGGCCACTGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVPDYKS*ATGIKF
Trigger: AAATTTGATCCCAGTGGCTCATGACTTATAGTCAGG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAAGGTGGAGGTTGCAGTaGGCTAAGATTGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRRWRLQ*AKIEPL
Trigger: CAGTGGCTCAATCTTAGCTCACTGCAACCTCCACCT...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAATTATAATCCTAGCTaGCAGGATGGGTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCNYNPS*QDGWIR
Trigger: TCTGATCCACCCATCCTGTCAGCTAGGATTATAATT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCGTTTCATATAGGCTaGTTGTTCTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPFHIG*LFSEAR
Trigger: TCTGGCTTCAGAGAACAATCAGCCTATATGAAACGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTTATCAAGTCCAGGTTaGATGGATCCAAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRLSSPG*MDPKRI
Trigger: TATTCTTTTTGGATCCATGCAACCTGGACTTGATAA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCCATATAGAATTCTCTaGCAGGGCTCCCATCATTGT +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYPYRIL*QGSHHC
Trigger: ACAATGATGGGAGCCCTGGCAGAGAATTCTATATGG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGTTAAATGACGGAAGTTaGCTTGTAAAAGCCACCCGT +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVLNDGS*LVKATR
Trigger: ACGGGTGGCTTTTACAAGGCAACTTCCGTCATTTAA...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPRILP*RLGDLL
Trigger: TAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTCTACCTTCAGCATCTaGTCCTCCAACTTTCTACCA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSTFSI*SSNFLP
Trigger: TGGTAGAAAGTTGGAGGAGCAGATGCTGAAGGTAGA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTCTACCTTCAGCATCTaGTCCTCCAACTTTCTACCA +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFISTFSI*SSNFLP
Trigger: TGGTAGAAAGTTGGAGGAGCAGATGCTGAAGGTAGA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTAAGCCCCTGTCATTTTaGTTGATGCCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIKPLSF*LMPFTL
Trigger: AAGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGAGTTCAGAAAGGCTGTaGCAGCCAGTAAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVSSERL*QPVSKV
Trigger: AACTTTACTTACTGGCTGGCACAGCCTTTCTGAACT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAATCATATCACCCCATATaGTGGGCTGGGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKSYHPI*WAGLDT
Trigger: AGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGA...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCCGATGTGTGTTTTCTaGTCATATCACCCCATATGC +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNPMCVF*SYHPIC
Trigger: GCATATGGGGTGATATGAGCAGAAAACACACATCGG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTACTTCCGCTGGGTGTaGTCCATGCCACTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTYFRWV*SMPLFG
Trigger: ACCAAACAGTGGCATGGACCACACCCAGCGGAAGTA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATCGGCTTTAGCTCTCTaGAATCAGCGACGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQSALAL*NQRRLP
Trigger: AGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGCCGA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTAAACAACAGTCACACTaGAGGATCAAAACATTAGCC +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFKQQSH*RIKTLA
Trigger: GGCTAATGTTTTGATCCTCCAGTGTGACTGTTGTTT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGCCTCTCATAGAAGATaGGTCTCTTGGATTTACACT +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRASHRR*VSWIYT
Trigger: AGTGTAAATCCAAGAGACCCATCTTCTATGAGAGGC...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTGCTCTAAAGCAGTTTaGGTCCAGAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNCSKAV*VQNKGV
Trigger: GACCCCTTTATTCTGGACCCAAACTGCTTTAGAGCA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTATCAAGTCACCATTACTaGCAGTTCTGGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVSSHHY*QFWFWN
Trigger: GTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGACTGAGCTCCGTGTCCTaGAGAAAATCATTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRLSSVS*RKSFKL
Trigger: CAACTTAAATGATTTTCTCCAGGACACGGAGCTCAG...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGGTAAGGGACTGGGGGTaGAGTTCTATTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILVRDWG*SSIGRG
Trigger: TCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTAC...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATCTAGGAGTGTGGGGTaGGGTAGGGGGCTGACTTTT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQSRSVG*GRGLTF
Trigger: AAAAGTCAGCCCCCTACCCCACCCCACACTCCTAGA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGGGAATTTCCACCAGTaGTCTCTGCATTTACTACTG +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYGNFHQ*SLHLLL
Trigger: CAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGACAAGTGAACCGAGTATaGCCAGAATCGTTAAGATCC +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRQVNRV*PESLRS
Trigger: GGATCTTAACGATTCTGGTCATACTCGGTTCACTTG...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACTGTGAACACTGTAGCTaGAATGGCATAAATGAGGAG +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYCEHCS*NGINEE
Trigger: CTCCTCATTTATGCCATTTCAGCTACAGTGTTCACA...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGAACACTGTAGCTaGAATGGCATAAATGAGGAG +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFICEHCS*NGINEE
Trigger: CTCCTCATTTATGCCATTTCAGCTACAGTGTTCACA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTACATTCTCCACCAGAATaGCAAAGGCATCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVHSPPE*QRHPLL
Trigger: CAGCAAAGGATGCCTTTGTCATTCTGGTGGAGAATG...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAATAGACAGGAAGCAATaGGCGACTAGGAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRIDRKQ*ATRKAK
Trigger: CTTTGCTTTCCTAGTCGCTCATTGCTTCCTGTCTAT...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGAGCCTTAATTATCTaGTGGCAAAAACCACGATAC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCRALII*WQKPRY
Trigger: GTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGAGAGCCTTAATTATCTaGTGGCAAAAACCACGATAC +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVRALII*WQKPRY
Trigger: GTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCT...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTACCCCCTACTAGGGTaGAATCCTAAAACTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTYPLLG*NPKTAQ
Trigger: CTGGGCAGTTTTAGGATTTCACCCTAGTAGGGGGTA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAAAGCTTTATTATTCTaGGCTCCGTGTCCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNKALLF*APCPGE
Trigger: TTCTCCAGGACACGGAGCTCAGAATAATAAAGCTTT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATCAGAACACACCTCCGTaGTTTATGCAGGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYQNTPP*FMQEEK
Trigger: TTTTTCTTCCTGCATAAATCACGGAGGTGTGTTCTG...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCTGACTATAAGTCATaGGCCACTGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPDYKS*ATGIKF
Trigger: AAATTTGATCCCAGTGGCTCATGACTTATAGTCAGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGTCTTACACTTCTGTaGCAAAAGGGCATATCACAT +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCSLTLL*QKGISH
Trigger: ATGTGATATGCCCTTTTGTCACAGAAGTGTAAGACT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCCCTACTGTATTGACTaGTCTTTAAATTTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDPYCID*SLNLAA
Trigger: GGCGGCCAAATTTAAAGATCAGTCAATACAGTAGGG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGAGGTCCCTACTGTATTaGCTGATCTTTAAATTTGGC +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSRSLLY*LIFKFG
Trigger: GCCAAATTTAAAGATCAGTCAATACAGTAGGGACCT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTTATAATTCTGGCAACTaGGTCAGTACACAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFYNSGN*VSTQRK
Trigger: TTTTCTCTGTGTACTGACTCAGTTGCCAGAATTATA...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAATTCTTCAGGGCTCATaGGACCAGTCACCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRILQGS*DQSPFL
Trigger: AAGAAAAGGTGACTGGTCTCATGAGCCCTGAAGAAT...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCTTGGGAGACCTTCTTTaGTTTGCATACAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESLGDLL*FAYSHH
Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAA...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTTGGGAGACCTTCTTTaGTTTGCATACAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLLGDLL*FAYSHH
Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCTACCACCACATGTACTaGAGAGGCCCAGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESYHHMY*RGPEIL
Trigger: CAAAATTTCTGGGCCTCTGCAGTACATGTGGTGGTA...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTTTCAGCACACATCGTaGACAAGCATTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIFQHTS*TSIFLS
Trigger: GGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGACCAAAGGCAACAAATaGAAGATTTCAGCACACATC +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSTKGNK*KISAHI
Trigger: GATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGACAGCTAAACCTGTGCTaGAGACTATCAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRQLNLC*RLSAPC
Trigger: GCAAGGTGCTGATAGTCTGCAGCACAGGTTTAGCTG...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCCATATAGAATTCTCTaGCAGGGCTCCCATCATTGT +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDPYRIL*QGSHHC
Trigger: ACAATGATGGGAGCCCTGGCAGAGAATTCTATATGG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCCCATATAGAATTCTCTaGCAGGGCTCCCATCATTGT +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESPYRIL*QGSHHC
Trigger: ACAATGATGGGAGCCCTGGCAGAGAATTCTATATGG...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGCTAAACTCGCTGGGTaGCCCAGCTTCCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYAKLAG*PSFLSN
Trigger: ATTTGAAAGGAAGCTGGGGCACCCAGCGAGTTTAGC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR GCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAAAGGAGAGGAGCACCTaGCAGTGTGTTTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKKERST*QCVFRL
Trigger: CAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFITLANG*LLSPSD
Trigger: GTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCACTGGCTTTGAGCTCTaGTCATCCATGCAAGGATTA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLTGFEL*SSMQGL
Trigger: TAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGGAACCCATTCTATCTaGCCAATTATTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIGTHSI*PIIPKS
Trigger: AGACTTGGGAATAATTGGGCAGATAGAATGGGTTCC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGGAACCCATTCTATCTaGCCAATTATTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYGTHSI*PIIPKS
Trigger: AGACTTGGGAATAATTGGGCAGATAGAATGGGTTCC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTTCCATCTGCAAAGTCTaGACTGTGTCAATAATGACC +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFISICKV*TVSIMT
Trigger: GGTCATTATTGACACAGTGCAGACTTTGCAGATGGA...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTCCATCTGCAAAGTCTaGACTGTGTCAATAATGACC +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICSICKV*TVSIMT
Trigger: GGTCATTATTGACACAGTGCAGACTTTGCAGATGGA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNVHATV*YCFQLC
Trigger: ACAAAGTTGGAAGCAATACCAAACAGTGGCATGGAC...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACTTTCAGTTCTTGCCTTaGACACGCTGCTACACACAG +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYFQFLP*TRCYTQ
Trigger: CTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAA...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGACTGGAACTGGTAGTTTaGGGCAGAGAACAGAAGATT +
Preference number: 4 (lower is better)
Translates to: SIGARVRKGNHLNIPETRLELVV*GREQKI
Trigger: AATCTTCTGTTCTCTGCCCCAAACTACCAGTTCCAG...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACACAGCGATGGAAGAATaGAATAGGTGCACTCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYTAMEE*NRCTRW
Trigger: CCAGCGAGTGCACCTATTCCATTCTTCCATCGCTGT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACGGGCCTCTGCAAACTTaGCATAGCAGGAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYGPLQT*HSRKCS
Trigger: TGAACATTTCCTGCTATGCCAAGTTTGCAGAGGCCC...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGCATGGCTTCTTTGATTaGGGAAAACTGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVHGFFD*GKLIGV
Trigger: TACTCCAATCAGTTTTCCCCAATCAAAGAAGCCATG...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 4 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGCCTCTCATAGAAGATaGGTCTCTTGGATTTACACT +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICASHRR*VSWIYT
Trigger: AGTGTAAATCCAAGAGACCCATCTTCTATGAGAGGC...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATTGCTCTAAAGCAGTTTaGGTCCAGAATAAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDCSKAV*VQNKGV
Trigger: GACCCCTTTATTCTGGACCCAAACTGCTTTAGAGCA...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTCAAGTCACCATTACTaGCAGTTCTGGTTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICSSHHY*QFWFWN
Trigger: GTTCCAAAACCAGAACTGCCAGTAATGGTGACTTGA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGGTAAGGGACTGGGGGTaGAGTTCTATTGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLVRDWG*SSIGRG
Trigger: TCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTAC...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACCTACAACTGTGTCTGTaGGGCATGTTCAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYLQLCL*GMFKHL
Trigger: TAGGTGCTTGAACATGCCCCACAGACACAGTTGTAG...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCCAATTCAGAGCTCTTaGAAGTTAATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCPIQSS*KLISQQ
Trigger: TTGCTGGGAAATTAACTTCCAAGAGCTCTGAATTGG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp GCCGCACTGTACCAAATCCACTTGGCTGTTGGTGGTTaGAGAAACTTGTTACATGCTTTCATTGAAGTAATA +
Preference number: 4 (lower is better)
Translates to: AALYQIHLAVGG*RNLLHAFIEVI
Trigger: TATTACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGATTTGGTACAGTGCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCAATGCAGAAGAGGATaGAGAGCAGCAGCCATGGTA +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSQCRRG*RAAAMV
Trigger: TACCATGGCTGCTGCTCTTCATCCTCTTCTGCATTG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGCACCTGTTGCTATTaGAAAGCCACAAATAAATCC +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFICTCCY*KATNKS
Trigger: GGATTTATTTGTGGCTTTTCAATAGCAACAGGTGCA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCCACACAAGTACTCTTaGTATATACCTGATTATCAC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCPHKYS*YIPDYH
Trigger: GTGATAATCAGGTATATATCAAGAGTACTTGTGTGG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCCACACAAGTACTCTTaGTATATACCTGATTATCAC +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSPHKYS*YIPDYH
Trigger: GTGATAATCAGGTATATATCAAGAGTACTTGTGTGG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTACTAGCAGTGGCAAGTaGATGAAGACCTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSTSSGK*MKTLPA
Trigger: AGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGTTAACCCTAAGCCACTaGCGTTACTCTGAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILLTLSH*RYSEAE
Trigger: TTCGGCTTCAGAGTAACGTCAGTGGCTTAGGGTTAA...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAACTCTGGATACTCAATaGATTGCCAAGGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRTLDTQ*IAKERS
Trigger: GCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGT...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTAGGAACAACTGGCTTTaGGCTCTGCTCATCCATGCA +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSRNNWL*ALLIHA
Trigger: TGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACATGGTGGAAATAGTTaGAGCCTCAGGGGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQHGGNS*SLRGSD
Trigger: ATCACTGCCCCTGAGGCTTCAACTATTTCCACCATG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCAGAACACACCTCCGTaGTTTATGCAGGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLQNTPP*FMQEEK
Trigger: TTTTTCTTCCTGCATAAATCACGGAGGTGTGTTCTG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAAGCTGCTCTAGTGGGTaGCTGGAAAACACTAAAACA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKSCSSG*LENTKT
Trigger: TGTTTTAGTGTTTTCCAGTCACCCACTAGAGCAGCT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAGTCTTACACTTCTGTaGCAAAAGGGCATATCACAT +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNSLTLL*QKGISH
Trigger: ATGTGATATGCCCTTTTGTCACAGAAGTGTAAGACT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGTTAACTGTCCCCATGTaGTCATCTCTGAAAATCAAA +
Preference number: 4 (lower is better)
Translates to: EQLALSSAHPCKDYTISVLTVPM*SSLKIK
Trigger: TTTGATTTTCAGAGATGATCACATGGGGACAGTTAA...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAGGTCCCTACTGTATTaGCTGATCTTTAAATTTGGC +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYRSLLY*LIFKFG
Trigger: GCCAAATTTAAAGATCAGTCAATACAGTAGGGACCT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAGGTCCCTACTGTATTaGCTGATCTTTAAATTTGGC +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIRSLLY*LIFKFG
Trigger: GCCAAATTTAAAGATCAGTCAATACAGTAGGGACCT...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTGCCTTGGACACGCTaGTACACACAGTGCTACAGA +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLLPWTR*YTQCYR
Trigger: TCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACACCAGCTTCTTTCATTaGTTTCCTACTGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYTSFFH*FPTVFH
Trigger: GTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACCACATATGTGGTGCCTaGAGTTCCTGTAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYHICGA*SSCSCF
Trigger: AAAACAGCTACAGGAACTGCAGGCACCACATATGTG...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTATTAACTGTGGCAGGTaGACTGATAAGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTINCGR*TDKPPD
Trigger: GTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAATAATCTGGTACCTTaGCCCCAAATAACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTNNLVP*PQITAR
Trigger: CCTGGCGGTTATTTGGGGGCAAGGTACCAGATTATT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGTGAAGAAATCCACATaGTTCCCTAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCVKKST*FPKEDR
Trigger: TCTATCTTCTTTAGGGAAGCATGTGGATTTCTTCAC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTTACCTAATAGTAAGGTaGAGATGTGAAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCYLIVR*RCEEIH
Trigger: GTGGATTTCTTCACATCTGCACCTTACTATTAGGTA...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGATCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRSTSGL*IYYCGR
Trigger: CCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGA...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTCCACCAGTGGTCTCTaGATTTACTACTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTSTSGL*IYYCGR
Trigger: CCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTTCATATCACCCCATATaGTGGGCTGGGCTTGACACT +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSSYHPI*WAGLDT
Trigger: AGTGTCAAGCCCAGCCCAGCATATGGGGTGATATGA...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGGCCACATTACACAGCTaGGAGAAATCAAGACACACC +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILATLHS*EKSRHT
Trigger: GGTGTGTCTTGATTTCTCGCAGCTGTGTAATGTGGC...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGCCACATTACACAGCTaGGAGAAATCAAGACACACC +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYATLHS*EKSRHT
Trigger: GGTGTGTCTTGATTTCTCGCAGCTGTGTAATGTGGC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESVHATV*YCFQLC
Trigger: ACAAAGTTGGAAGCAATACCAAACAGTGGCATGGAC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGAATACATACTTCCGCTaGGTGTGGTCCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLNTYFR*VWSMPL
Trigger: CAGTGGCATGGACCACACCCAGCGGAAGTATGTATT...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAAAACCACGATACTCTaGTCACTACTACAATTGACA +
Preference number: 4 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCKTTIL*SLLQLT
Trigger: TGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTTCCTTCAGATTAGTGTaGTTTCTATTCCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICSFRLV*FLFPNL
Trigger: CAGGTTAGGGAATAGAAACCACACTAATCTGAAGGA...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGGGAATTTCCACCAGTaGTCTCTGCATTTACTACTG +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKGNFHQ*SLHLLL
Trigger: CAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCAGGAACCTAGAGGATaGGGGAAAATCTACTTAATA +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIQEPRG*GKIYLI
Trigger: TATTAAGTAGATTTTCCCCCATCCTCTAGGTTCCTG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGTAAAGTTGGACCTTTaGTCTTCAGAAGATAGGGTT +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICVKLDL*SSEDRV
Trigger: AACCCTATCTTCTGAAGACCAAAGGTCCAACTTTAC...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGACTACAACTGTGTCTGTaGGGCATGTTCAAGCACCTA +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRLQLCL*GMFKHL
Trigger: TAGGTGCTTGAACATGCCCCACAGACACAGTTGTAG...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAATGTGAACACTGTAGCTaGAATGGCATAAATGAGGAG +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKCEHCS*NGINEE
Trigger: CTCCTCATTTATGCCATTTCAGCTACAGTGTTCACA...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGAAAAAGAAGTGTCATaGTCCAGTACACCCAAAACA +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESEKEVS*SSTPKT
Trigger: TGTTTTGGGTGTACTGGATCATGACACTTCTTTTTC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTAGCCACTGTCATCTGCTaGCATGCTAGAATAAATTCA +
Preference number: 4 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVATVIC*HARINS
Trigger: TGAATTTATTCTAGCATGTCAGCAGATGACAGTGGC...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGCCACTGTCATCTGCTaGCATGCTAGAATAAATTCA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKATVIC*HARINS
Trigger: TGAATTTATTCTAGCATGTCAGCAGATGACAGTGGC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTTCTCTGATTTTGGCTaGTTTATGTGTGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNFSDFG*FMCVCV
Trigger: TACACACACACACATAAATCAGCCAAAATCAGAGAA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374720.8
CDS-3UTR TCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATGATCTTGCTAAGACATaGGCTCTTAATTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNDLAKT*ALNCVY
Trigger: ATACACACAATTAAGAGCTCATGTCTTAGCAAGATC...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAGCAGGGATGTCCAAGTaGGTAGAACCTAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRAGMSK*VEPNFQ
Trigger: TTGGAAATTAGGTTCTACTCACTTGGACATCCCTGC...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGGCAGCCTACGCTGTaGATACAGAATACACAAATA +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYRQPTL*IQNTQI
Trigger: TATTTGTGTATTCTGTATTCACAGCGTAGGCTGCCT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAAGGCAGCCTACGCTGTaGATACAGAATACACAAATA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKRQPTL*IQNTQI
Trigger: TATTTGTGTATTCTGTATTCACAGCGTAGGCTGCCT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAGAAGCTACTGTGTATaGATAGTGCCTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYRSYCV*IVPTFQ
Trigger: TTGAAAAGTAGGCACTATTCATACACAGTAGCTTCT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTTAGAGCAGCCTTTTaGCTTGGGTTCATTAGCCCC +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLFRAAF*LGFISP
Trigger: GGGGCTAATGAACCCAAGTCAAAAGGCTGCTCTAAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAACAGAACACACCTCCGTaGTTTATGCAGGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKQNTPP*FMQEEK
Trigger: TTTTTCTTCCTGCATAAATCACGGAGGTGTGTTCTG...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCCCTGACTATAAGTCATaGGCCACTGGGATCAAATTT +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCPDYKS*ATGIKF
Trigger: AAATTTGATCCCAGTGGCTCATGACTTATAGTCAGG...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAATTATAATCCTAGCTaGCAGGATGGGTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYNYNPS*QDGWIR
Trigger: TCTGATCCACCCATCCTGTCAGCTAGGATTATAATT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACATTTTTAAAGTCCTCTaGGAGCATAATGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYIFKVL*EHNAPS
Trigger: AGATGGAGCATTATGCTCTCAGAGGACTTTAAAAAT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAGCCACTGTTTGGTATTaGTTCCAACTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVATVWY*FQLCIF
Trigger: AAAAATACAAAGTTGGAAGCAATACCAAACAGTGGC...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGTACCACCACATGTACTaGAGAGGCCCAGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILYHHMY*RGPEIL
Trigger: CAAAATTTCTGGGCCTCTGCAGTACATGTGGTGGTA...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACTACCACCACATGTACTaGAGAGGCCCAGAAATTTTG +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYYHHMY*RGPEIL
Trigger: CAAAATTTCTGGGCCTCTGCAGTACATGTGGTGGTA...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCACCAAAGGCAACAAATaGAAGATTTCAGCACACATC +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLTKGNK*KISAHI
Trigger: GATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATACCAGCTTCTTTCATTaGTTTCCTACTGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDTSFFH*FPTVFH
Trigger: GTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCACCAGCTTCTTTCATTaGTTTCCTACTGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ARVRKGNHLNIPETRRESTSFFH*FPTVFH
Trigger: GTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGT...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGACACCGGAATTTTCAATaGTTTATGTTCCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRHRNFQ*FMFHVS
Trigger: AGAAACATGGAACATAAAGCATTGAAAATTCCGGTG...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 4 (lower is better)
Translates to: RIQKLTVAGALISLQTLRVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAGCTCTGCTCATCCATaGAAGGATTATACAATCTCA +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDSSAHP*KDYTIS
Trigger: TGAGATTGTATAATCCTTGCATGGATGAGCAGAGCT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFISKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAAGCCCCTGTCATTTTaGTTGATGCCCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTKPLSF*LMPFTL
Trigger: AAGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAAGTTCAGAAAGGCTGTaGCAGCCAGTAAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKSSERL*QPVSKV
Trigger: AACTTTACTTACTGGCTGGCACAGCCTTTCTGAACT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTAAGTGGAGATAATAGGTaGAACCTTACAGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVSGDNR*NLTGLL
Trigger: CAATAGCCCTGTAAGGTTGCACCTATTATCTCCACT...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYVHATV*YCFQLC
Trigger: ACAAAGTTGGAAGCAATACCAAACAGTGGCATGGAC...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGAAAGTCCAGAAGGGTTaGAAGACTAGCAGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLKVQKG*KTSSGK
Trigger: CTTGCCACTGCTAGTCTTCCAACCCTTCTGGACTTT...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCATGGCTTCTTTGATTaGGGAAAACTGATTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLHGFFD*GKLIGV
Trigger: TACTCCAATCAGTTTTCCCCAATCAAAGAAGCCATG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAAACAACAGTCACACTaGAGGATCAAAACATTAGCC +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLKQQSH*RIKTLA
Trigger: GGCTAATGTTTTGATCCTCCAGTGTGACTGTTGTTT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGTTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSLRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAAAACCACGATACTCTaGTCACTACTACAATTGACA +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYKTTIL*SLLQLT
Trigger: TGTCAATTGTAGTAGTGACCAGAGTATCGTGGTTTT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATTGTACAAAATCAAGATaGGAAGAAAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDCTKSR*EERALQ
Trigger: CTGTAGTGCCCTTTCTTCCCATCTTGATTTTGTACA...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTCCTTCAGATTAGTGTaGTTTCTATTCCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLSFRLV*FLFPNL
Trigger: CAGGTTAGGGAATAGAAACCACACTAATCTGAAGGA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGGGAATTTCCACCAGTaGTCTCTGCATTTACTACTG +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYGNFHQ*SLHLLL
Trigger: CAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTGTCTTCAGCTATCTaGAGCTGCTCAGGAGTAACA +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLLSSAI*SCSGVT
Trigger: TGTTACTCCTGAGCAGCTTCAGATAGCTGAAGACAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGAAAAAGAAGTGTCATaGTCCAGTACACCCAAAACA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKEKEVS*SSTPKT
Trigger: TGTTTTGGGTGTACTGGATCATGACACTTCTTTTTC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCATTTTCCTTTCCTTTaGGCTGACTGTGAATATACA +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDHFPFL*ADCEYT
Trigger: TGTATATTCACAGTCAGCTCAAAGGAAAGGAAAATG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCATTTTCCTTTCCTTTaGGCTGACTGTGAATATACA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLHFPFL*ADCEYT
Trigger: TGTATATTCACAGTCAGCTCAAAGGAAAGGAAAATG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAAATTATAATCCTAGCTaGCAGGATGGGTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRNYNPS*QDGWIR
Trigger: TCTGATCCACCCATCCTGTCAGCTAGGATTATAATT...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATTTCATTTTGGCACTATaGAATAGGATGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDFILAL*NRMQMA
Trigger: TGCCATTTGCATCCTATTTCATAGTGCCAAAATGAA...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAAGGCTGATTGTTCTCTaGAGCCAGATGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQRLIVL*SQMEFH
Trigger: ATGGAATTCCATCTGGCTTCAGAGAACAATCAGCCT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACCGTTTCATATAGGCTaGTTGTTCTCTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQPFHIG*LFSEAR
Trigger: TCTGGCTTCAGAGAACAATCAGCCTATATGAAACGG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTATAATTCTGGCAACTaGGTCAGTACACAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLYNSGN*VSTQRK
Trigger: TTTTCTCTGTGTACTGACTCAGTTGCCAGAATTATA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATTTATCAAGTCCAGGTTaGATGGATCCAAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNLSSPG*MDPKRI
Trigger: TATTCTTTTTGGATCCATGCAACCTGGACTTGATAA...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATTGGGAGACCTTCTTTaGTTTGCATACAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQLGDLL*FAYSHH
Trigger: ATGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 4 (lower is better)
Translates to: INCGRCTDKPPDSESFICVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAATAAACTCAGTAAGTaGCTCCTCCTTAACCATTAT +
Preference number: 4 (lower is better)
Translates to: NMGISTSGLCIYYCGRFINKLSK*LLLNHY
Trigger: ATAATGGTTAAGGAGGAGGCACTTACTGAGTTTATT...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATAAACTCAGTAAGTaGCTCCTCCTTAACCATTAT +
Preference number: 4 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYNKLSK*LLLNHY
Trigger: ATAATGGTTAAGGAGGAGGCACTTACTGAGTTTATT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCCCAGAATTCTACCTTaGAGGCTAGGAGATCTCTTA +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSPRILP*RLGDLL
Trigger: TAAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTCAAAAGGGCTAACATaGATTCTTAGCACACAAAGA +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLSKGLT*ILSTQR
Trigger: TCTTTGTGTGCTAAGAATGCATGTTAGCCCTTTTGA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGTGAAGAAATCCACATaGTTCCCTAAAGAAGATAGA +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDVKKST*FPKEDR
Trigger: TCTATCTTCTTTAGGGAAGCATGTGGATTTCTTCAC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATTACCTAATAGTAAGGTaGAGATGTGAAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDYLIVR*RCEEIH
Trigger: GTGGATTTCTTCACATCTGCACCTTACTATTAGGTA...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGAGTTCAGAAAGGCTGTaGCAGCCAGTAAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILSSERL*QPVSKV
Trigger: AACTTTACTTACTGGCTGGCACAGCCTTTCTGAACT...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCCGATGTGTGTTTTCTaGTCATATCACCCCATATGC +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSPMCVF*SYHPIC
Trigger: GCATATGGGGTGATATGAGCAGAAAACACACATCGG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTCCATCTGCAAAGTCTaGACTGTGTCAATAATGACC +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTSICKV*TVSIMT
Trigger: GGTCATTATTGACACAGTGCAGACTTTGCAGATGGA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACTGGAACTGGTAGTTTaGGGCAGAGAACAGAAGATT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQLELVV*GREQKI
Trigger: AATCTTCTGTTCTCTGCCCCAAACTACCAGTTCCAG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCAAACAACAGTCACACTaGAGGATCAAAACATTAGCC +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCKQQSH*RIKTLA
Trigger: GGCTAATGTTTTGATCCTCCAGTGTGACTGTTGTTT...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGTCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTTTAGATACTTAGACTaGACTTACGCCCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: EINCGRCTDKPPDSESFIFRYLD*TYALFY
Trigger: ATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCGTAAAGTTGGACCTTTaGTCTTCAGAAGATAGGGTT +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCVKLDL*SSEDRV
Trigger: AACCCTATCTTCTGAAGACCAAAGGTCCAACTTTAC...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp AAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTAATTGTGTGTATGCAT +
Preference number: 4 (lower is better)
Translates to: KIATLAMLVSQI*LRHELLIVCMH
Trigger: ATGCATACACACAATTAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp TGTTTCAAATCACCAGCCCCCAAAGCTATCCTATTATaGTCACATTCCTGTGGGGTATCTAATACAATTTAC +
Preference number: 4 (lower is better)
Translates to: CFKSPAPKAILL*SHSCGVSNTIY
Trigger: GTAAATTGTATTAGATACCCCACAGGAATGTGACAATAATAGGATAGCTTTGGGGGCTGGTGATTTGAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp CATACCTACACTGCCATTATGAGAGGAAGTATAGCATaGATAAGGTGTTGGGGTAATTATCTTTGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: HTYTAIMRGSIA*IRCWGNYLWSN
Trigger: ATTGCTCCAAAGATAATTACCCCAACACCTTATCAATGCTATACTTCCTCTCATAATGGCAGTGTAGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR TCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGGAAAAAGAAGTGTCATaGTCCAGTACACCCAAAACA +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILEKEVS*SSTPKT
Trigger: TGTTTTGGGTGTACTGGATCATGACACTTCTTTTTC...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAGCCACTGTCATCTGCTaGCATGCTAGAATAAATTCA +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQATVIC*HARINS
Trigger: TGAATTTATTCTAGCATGTCAGCAGATGACAGTGGC...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAGAGCCTTAATTATCTaGTGGCAAAAACCACGATAC +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTRALII*WQKPRY
Trigger: GTATCGTGGTTTTTGCCATCAGATAATTAAGGCTCT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAAGAAGCTACTGTGTATaGATAGTGCCTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKRSYCV*IVPTFQ
Trigger: TTGAAAAGTAGGCACTATTCATACACAGTAGCTTCT...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCAGAAGCTACTGTGTATaGATAGTGCCTACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCRSYCV*IVPTFQ
Trigger: TTGAAAAGTAGGCACTATTCATACACAGTAGCTTCT...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAGTCTTACACTTCTGTaGCAAAAGGGCATATCACAT +
Preference number: 4 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTSLTLL*QKGISH
Trigger: ATGTGATATGCCCTTTTGTCACAGAAGTGTAAGACT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTTAACTGTCCCCATGTaGTCATCTCTGAAAATCAAA +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCLTVPM*SSLKIK
Trigger: TTTGATTTTCAGAGATGATCACATGGGGACAGTTAA...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACATTTTTAAAGTCCTCTaGGAGCATAATGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYIFKVL*EHNAPS
Trigger: AGATGGAGCATTATGCTCTCAGAGGACTTTAAAAAT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTATAATTCTGGCAACTaGGTCAGTACACAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCYNSGN*VSTQRK
Trigger: TTTTCTCTGTGTACTGACTCAGTTGCCAGAATTATA...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTTCAGCACACATCGTaGACAAGCATTTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLFQHTS*TSIFLS
Trigger: GGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGACCAAAGGCAACAAATaGAAGATTTCAGCACACATC +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILTKGNK*KISAHI
Trigger: GATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGT...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTACATTAGCAAACGGCTaGTTATTAAGCCCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSTLANG*LLSPSD
Trigger: GTCACTAGGGCTTAATAAGCAGCCGTTTGCTAATGT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLVHATV*YCFQLC
Trigger: ACAAAGTTGGAAGCAATACCAAACAGTGGCATGGAC...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTCTATTCTTCTCACTTaGGCAGAAGATGGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLSILLT*AEDGSS
Trigger: ACTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGATGTACAAAATCAAGATaGGAAGAAAGGGCACTACAG +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRCTKSR*EERALQ
Trigger: CTGTAGTGCCCTTTCTTCCCATCTTGATTTTGTACA...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCTGAGCTCCGTGTCCTaGAGAAAATCATTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSLSSVS*RKSFKL
Trigger: CAACTTAAATGATTTTCTCCAGGACACGGAGCTCAG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCTTTTCTATCCAACATaGGAATTTCCACCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSLFYPT*EFPPVV
Trigger: GACCACTGGTGGAAATTCCCATGTTGGATAGAAAAG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGCAGGAACCTAGAGGATaGGGGAAAATCTACTTAATA +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILQEPRG*GKIYLI
Trigger: TATTAAGTAGATTTTCCCCCATCCTCTAGGTTCCTG...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACCCAATTCAGAGCTCTTaGAAGTTAATTTCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYPIQSS*KLISQQ
Trigger: TTGCTGGGAAATTAACTTCCAAGAGCTCTGAATTGG...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTAAGACATGAGCTCTTA +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAM*VSQILLRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGAAATCTGTGCGGCTATaGAACAGATGGTATTCTGAA +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLKSVRL*NRWYSE
Trigger: TTCAGAATACCATCTGTTTCATAGCCGCACAGATTT...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGATTCATTTTGGCACTATaGAATAGGATGCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRFILAL*NRMQMA
Trigger: TGCCATTTGCATCCTATTTCATAGTGCCAAAATGAA...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGATTTTTAAAGTCCTCTaGGAGCATAATGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ENYSFKIATLAMLVSQILIFKVL*EHNAPS
Trigger: AGATGGAGCATTATGCTCTCAGAGGACTTTAAAAAT...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTATTATCAAGTCCAGGTTaGATGGATCCAAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVLSSPG*MDPKRI
Trigger: TATTCTTTTTGGATCCATGCAACCTGGACTTGATAA...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR GCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGACCAGCTTCTTTCATTaGTTTCCTACTGTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLTSFFH*FPTVFH
Trigger: GTGGAAAACAGTAGGAAAGCAATGAAAGAAGCTGGT...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCCACCGGAATTTTCAATaGTTTATGTTCCATGTTTCT +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCHRNFQ*FMFHVS
Trigger: AGAAACATGGAACATAAAGCATTGAAAATTCCGGTG...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCGTGACATTACTTGTATaGATTTCCATAATACCGATC +
Preference number: 4 (lower is better)
Translates to: NISHCIKCFKGTTGFELCVTLLV*ISIIPI
Trigger: GATCGGTATTATGGAAATGCATACAAGTAATGTCAC...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGATACCTAATAGTAAGGTaGAGATGTGAAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRYLIVR*RCEEIH
Trigger: GTGGATTTCTTCACATCTGCACCTTACTATTAGGTA...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAATTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKLRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAAGGAGATCTCTTAAAATaGCTGTTAGTAGCTAGTAAT +
Preference number: 4 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKGDLLK*LLVASN
Trigger: ATTACTAGCTACTAACAGCCATTTTAAGAGATCTCC...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATTCTCTGAAGCCAGATaGAATTCCATCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQFSEAR*NSIQFR
Trigger: TCTGAATTGGATGGAATTCCATCTGGCTTCAGAGAA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAACATTTTCCTTTCCTTTaGGCTGACTGTGAATATACA +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQHFPFL*ADCEYT
Trigger: TGTATATTCACAGTCAGCTCAAAGGAAAGGAAAATG...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAGATCTTGCTAAGACATaGGCTCTTAATTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: IMELSVSFYREEVRKLQQDLAKT*ALNCVY
Trigger: ATACACACAATTAAGAGCTCATGTCTTAGCAAGATC...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR TCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTGAATGTCTTCTGTTTTaGTACCCATCTTCTAGACTT +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSECLLF*YPSSRL
Trigger: AAGTCTAGAAGATGGGTATCAAAACAGAAGACATTC...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGCCACTGTTTGGTATTaGTTCCAACTTTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYATVWY*FQLCIF
Trigger: AAAAATACAAAGTTGGAAGCAATACCAAACAGTGGC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACTTATCAAGTCCAGGTTaGATGGATCCAAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYLSSPG*MDPKRI
Trigger: TATTCTTTTTGGATCCATGCAACCTGGACTTGATAA...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR GCA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAATAAACTCAGTAAGTaGCTCCTCCTTAACCATTAT +
Preference number: 4 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYNKLSK*LLLNHY
Trigger: ATAATGGTTAAGGAGGAGGCACTTACTGAGTTTATT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTAAGATTCTCCTTCCATaGAATGATAAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HEDSVLIILLFLQISVVSKILLP*NDKMLR
Trigger: CCTCAGCATTTTATCATTCCATGGAAGGAGAATCTT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGATTAAGGAAAACAGCCTaGCAATTAATTTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: ILQLNIVELWILNELPRRLRKTA*QLICNS
Trigger: TGAGTTGCAAATTAATTGCCAGGCTGTTTTCCTTAA...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
3UTR CAA 72 bp AGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTaGGGTACCAACATACAGTTAAGCTACTTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SKCLLLNHYRKS*GTNIQLSYLSC
Trigger: ACAACTTAAGTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGCAACAAGCAGAACAATaGAGTATTAGCCATTCATAT +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLQQAEQ*SISHSY
Trigger: ATATGAATGGCTAATACTCCATTGTTCTGCTTGTTG...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CCA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTTAGATACTTAGACTaGACTTACGCCCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLFRYLD*TYALFY
Trigger: ATAGAAAAGGGCGTAAGTCCAGTCTAAGTATCTAAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS CCA 90 bp CCTGGCACCGCACGGCTAGGCGGCGGCGGCGGCTGCAGCGGCGGCTaGTACTCAAGAGGCGGCGCGGCTAGAGGCAGGCGCCGGCCACAT +
Preference number: 5 (lower is better)
Translates to: PGTARLGGGGGCSGG*YSRGGAARGRRRPH
Trigger: ATGTGGCCGGCGCCTGCCTCTAGCCGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCCGCCGCCGCCGCCTAGCCGTGCGGTGCCAGG
77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPGFHSR*ELCAAE
Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGAAGGCAAGGAAGCCCTaGGCAGATACCAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGKARKP*ADTKIS
Trigger: ACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTT...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCATGCAGGAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPMQENH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCAT...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSQSFQF*PWTRCY
Trigger: GTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTG...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGAAGCCCCTGTCATTTaGCTTGATGCCCTTCACACT +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPEAPVI*LDALHT
Trigger: AGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTTC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS TCA 90 bp CACTCGCAAAGCATTCTCCACCAGAATGACAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCTGTTGATAGCTGTGGCTGTGTATGC +
Preference number: 5 (lower is better)
Translates to: HSQSILHQNDKGILC*GAEVGAVDSCGCVC
Trigger: GCATACACAGCCACAGCTATCAACAGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTTGTCATTCTGGTGGAGAATGCTTTGCGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS-3UTR CAA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: ARVRKGNHLNIPETRRESGFHSR*ELCAAE
Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTG +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPGPCHC*VLLPTL
Trigger: CAAAGTTGGAAGCAATACCAAACAGTGGCATGGACC...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTTTTCAGTTCTTGCCTaGGACACGCTGCTACACACA +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSFSVLA*DTLLHT
Trigger: TGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCATTTGGGAGACCTTCTTaGCTTTGCATACAGCCACCA +
Preference number: 5 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPFGRPS*LCIQPP
Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAAA...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCAGAGGCCCAGAAATTTaGAACTCCACAAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSRGPEI*NSTKPC
Trigger: GCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCT...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTAGGTTCAAGCAGAACTaGCTCCCGAAGCCATCGGCT +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFRFKQN*LPKPSA
Trigger: AGCCGATGGCTTCGGGAGCAAGTTCTGCTTGAACCT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGTTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGFHQVT*EGHLLK
Trigger: TTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAA...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGAAGCCCCTGTCATTTaGCTTGATGCCCTTCACACT +
Preference number: 5 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSEAPVI*LDALHT
Trigger: AGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTTC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTG +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRGPCHC*VLLPTL
Trigger: CAAAGTTGGAAGCAATACCAAACAGTGGCATGGACC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTTTTCAGTTCTTGCCTaGGACACGCTGCTACACACA +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRFSVLA*DTLLHT
Trigger: TGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGTTTTCAGTTCTTGCCTaGGACACGCTGCTACACACA +
Preference number: 5 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGFSVLA*DTLLHT
Trigger: TGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAA...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTTTGGGAGACCTTCTTaGCTTTGCATACAGCCACCA +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRFGRPS*LCIQPP
Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAAA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCCAGAAGTTGGTGCTGTaGATAGCTGTGGCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCQKLVL*IAVAVY
Trigger: ATACACAGCCACAGCTATCAACAGCACCAACTTCTG...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAA +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSKSPTV*MVATRK
Trigger: TTTGCGAGTGGCTACCATCAACACAGTAGGAGATTT...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAAGGTTCAAGCAGAACTaGCTCCCGAAGCCATCGGCT +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVRFKQN*LPKPSA
Trigger: AGCCGATGGCTTCGGGAGCAAGTTCTGCTTGAACCT...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTTCCCAGAATTCTACCTaGCAGGCTAGGAGATCTCTT +
Preference number: 5 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSSQNST*QARRSL
Trigger: AAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGGA...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTATGCAGGAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFMQENH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCAT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS CCA 90 bp GTATGTCTGTGCAGCTACGGTCCTCCAGCGGCTTCCATTCTCGTTTaGAGCTATGTAATTGAAATCCAAGAAGAAGACAGAATGAGGCAG +
Preference number: 5 (lower is better)
Translates to: VCLCSYGPPAASILV*SYVIEIQEEDRMRQ
Trigger: CTGCCTCATTCTGTCTTCTTCTTGGATTTCAATTACATAGCTCCAAACGAGAATGGAAGCCGCTGGAGGACCGTAGCTGCACAGACATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607692.1
CDS-3UTR CAA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: ILQLNIVELWILNELPRRGFHSR*ELCAAE
Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFILTLV*LLHLLL
Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTG +
Preference number: 5 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFGPCHC*VLLPTL
Trigger: CAAAGTTGGAAGCAATACCAAACAGTGGCATGGACC...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPLCKTL*SLTKVI
Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGAGACCTTCTTTGCTTaGCATACAGCCACCATAGTA +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRETFFA*HTATIV
Trigger: TACTATGGTGGCTGTATGCAAAGCAAAGAAGGTCTC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCCTTCAGGGGAGTAACAGTTTCTTaGGGAGACCTTCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: KVDRPSLNKNFAGDLAFRGVTVS*GDLLCF
Trigger: AAAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCC...CCTGAAGGCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAGTAAGAGCAACACGTTaGCGCATAACCAACATTATC +
Preference number: 5 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPVRATR*RITNII
Trigger: GATAATGTTGGTTATGCGCAAACGTGTTGCTCTTAC...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAA +
Preference number: 5 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCKSPTV*MVATRK
Trigger: TTTGCGAGTGGCTACCATCAACACAGTAGGAGATTT...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGCCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKPGLPS*YFVSMA
Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGGGACACCTCTTAAAATaGCTAGCTCCTGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRGHLLK*LAPGMS
Trigger: AGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCC...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTTCTCACTTGGGCAGAAGATGGAAGCAGTGAGCGAATAGCAATAAGGCAGCCCTGGTCACTACTACAATaGACAATAGAGGACCCCAAT +
Preference number: 5 (lower is better)
Translates to: LLTWAEDGSSERIAIRQPWSLLQ*TIEDPN
Trigger: ATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCA...GGGCTGCCTTATTGCTATTCGCTCACTGCTTCCATCTTCTGCCCAAGTGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAGGGGGTGGAGTTCTATaGGCAGAGGAATCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVGGGVL*AEESEA
Trigger: AGCTTCAGATTCCTCTGCCAATAGAACTCCACCCCC...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGCAAGCACCTACATGTTaGTTCCCCCACATGAATACA +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRQAPTC*FPHMNT
Trigger: TGTATTCATGTGGGGGAACAAACATGTAGGTGCTTG...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS GCA 90 bp ACTCAGAGTTTTCAGTTCTTGCCTTGGACACGCTGCTACACACAGTaGTACAGACTTAATCTTCCGGTTTATCAAGTCCAGGTTGCATGG +
Preference number: 5 (lower is better)
Translates to: TQSFQFLPWTRCYTQ*YRLNLPVYQVQVAW
Trigger: CCATGCAACCTGGACTTGATAAACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS-3UTR CAA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGGGCTTCCATTCTCGTTaGGAGCTCTGCGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLGFHSR*ELCAAE
Trigger: CTCCGCCGCGCAGAGCTCCAAACGAGAATGGAAGCC...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCGAGACCTTCTTTGCTTaGCATACAGCCACCATAGTA +
Preference number: 5 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFETFFA*HTATIV
Trigger: TACTATGGTGGCTGTATGCAAAGCAAAGAAGGTCTC...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCGTAAGAGCAACACGTTaGCGCATAACCAACATTATC +
Preference number: 5 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCVRATR*RITNII
Trigger: GATAATGTTGGTTATGCGCAAACGTGTTGCTCTTAC...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACAATCTATTCTTCTCACTaGGGCAGAAGATGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTIYSSH*GRRWKQ
Trigger: CTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGAT...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTGGTCACTACTACAATaGACAATAGAGGACCCCAAT +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRWSLLQ*TIEDPN
Trigger: ATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGGTTCCTGTAGCTGTTTaGAAGAGGGAGGGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSVPVAV*KREGEV
Trigger: TACCTCTCCCTCCCTCTTCAAAACAGCTACAGGAAC...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGGGGACTACCCTTGAGTTaGCTAATTTATCATCATCTT +
Preference number: 5 (lower is better)
Translates to: RGQKPSSEHRLQEPRGWGGLPLS*LIYHHL
Trigger: AAGATGATGATAAATTAGCAAACTCAAGGGTAGTCC...CCCCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATGGGGGTGGAGTTCTATaGGCAGAGGAATCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNGGGVL*AEESEA
Trigger: AGCTTCAGATTCCTCTGCCAATAGAACTCCACCCCC...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAGAAGCCCCTGTCATTTaGCTTGATGCCCTTCACACT +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVEAPVI*LDALHT
Trigger: AGTGTGAAGGGCATCAAGCAAAATGACAGGGGCTTC...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTTAGTGTGGAGAGCTTaGGAGTTAGAACTAGATTTG +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSLVWRA*ELELDL
Trigger: CAAATCTAGTTCTAACTCCAAAGCTCTCCACACTAA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS CCA 90 bp CTCTGCAAACTTCTGAACATCACTCAGAGTTTTCAGTTCTTGCCTTaGACACGCTGCTACACACAGTGCTACAGACTTAATCTTCCGGTT +
Preference number: 5 (lower is better)
Translates to: LCKLLNITQSFQFLP*TRCYTQCYRLNLPV
Trigger: AACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGATGTTCAGAAGTTTGCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIILTLV*LLHLLL
Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGTATTGCTTCCAACTTaGTATTTTTCTGCCCACAGA +
Preference number: 5 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGVLLPT*YFSAHR
Trigger: TCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATAC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAGAGTCAAAGTCGACAGACCCAGCCTGAACAAGAATTTCGCTGGGGATCTAGCTGCCACTGTTTGGTATaGCTTCCAACTTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: QSQSRQTQPEQEFRWGSSCHCLV*LPTLYF
Trigger: AAAATACAAAGTTGGAAGCAATACCAAACAGTGGCA...GCTAGATCCCCAGCGAAATTCTTGTTCAGGCTGGGTCTGTCGACTTTGACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAACTGTGTAAGACACTATaGTCACTGACAAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: NCVCGACSSTYMFVPPHELCKTL*SLTKVI
Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCACCCAATATAATTTCTTaGCTGGTCATTACTCCACTA +
Preference number: 5 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPPNIIS*LVITPL
Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATTTGGGAGACCTTCTTaGCTTTGCATACAGCCACCA +
Preference number: 5 (lower is better)
Translates to: RIQKLTVAGALISLQTLRFGRPS*LCIQPP
Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAAA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTTTTGGGAGACCTTCTTaGCTTTGCATACAGCCACCA +
Preference number: 5 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCFGRPS*LCIQPP
Trigger: TGGTGGCTGTATGCAAAGCAAAGAAGGTCTCCCAAA...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGAGAGGCCCAGAAATTTaGAACTCCACAAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSRGPEI*NSTKPC
Trigger: GCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACAATCTCAGTGGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: EQLALSSAHPCKDYTISVATLAM*VSQILL
Trigger: TAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGC...CACTGAGATTGTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGGACACCTCTTAAAATaGCTAGCTCCTGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFGHLLK*LAPGMS
Trigger: AGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATAAGGAACAACTGGCTTaGAGCTCTGCTCATCCATGC +
Preference number: 5 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNKEQLA*SSAHPC
Trigger: GCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTT...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACTGGCAGTTCTGGTTTaGGAACTGATCCCAGAATTC +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVLAVLV*ELIPEF
Trigger: GAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATAGGGGCCAAAAACCAAGTTCTGAGCACAGACTACAGGAACCTAGAGGATGGGGCTCAAAGAGACCCATaGTCTCTTCAAAATAACTTG +
Preference number: 5 (lower is better)
Translates to: IGAKNQVLSTDYRNLEDGAQRDP*SLQNNL
Trigger: CAAGTTATTTTGAAGAGACAATGGGTCTCTTTGAGC...CCCATCCTCTAGGTTCCTGTAGTCTGTGCTCAGAACTTGGTTTTTGGCCCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGGGGGTGGAGTTCTATaGGCAGAGGAATCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLGGGVL*AEESEA
Trigger: AGCTTCAGATTCCTCTGCCAATAGAACTCCACCCCC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTAAAGACTCCCTGGTCCTCCATCTCAGACACTTCCCACATACCTACACTGCCAGGTGGTTTGAGAAACTaGTTACATGCTTTCATTGAA +
Preference number: 5 (lower is better)
Translates to: LKTPWSSISDTSHIPTLPGGLRN*LHAFIE
Trigger: TTCAATGAAAGCATGTAACAAGTTTCTCAAACCACC...TGGCAGTGTAGGTATGTGGGAAGTGTCTGAGATGGAGGACCAGGGAGTCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS GCA 90 bp CTTCTGAACATCACTCAGAGTTTTCAGTTCTTGCCTTGGACACGCTaGTACACACAGTGCTACAGACTTAATCTTCCGGTTTATCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLNITQSFQFLPWTR*YTQCYRLNLPVYQV
Trigger: GACTTGATAAACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGATGTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 90 bp GTAGTGATGCAAATCTTACCACAAGCCTTATCAAAGAGGGTGGAGTaGATGTTCCAACAGAAGACATTACCCGCCCCTTCTGAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: VVMQILPQALSKRVE*MFQQKTLPAPSEKK
Trigger: TTTCTTTTCAGAAGGGGCGGGTAATGTCTTCTGTTGGAACATGCACTCCACCCTCTTTGATAAGGCTTGTGGTAAGATTTGCATCACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607701.1
CDS-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGATTGCTGCTGCACCTGTaGCTATTGAAAAGCCACAAA +
Preference number: 5 (lower is better)
Translates to: RIQKLTVAGALISLQTLRLLLHL*LLKSHK
Trigger: TTTGTGGCTTTTCAATAGCAACAGGTGCAGCAGCAA...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: SIGARVRKGNHLNIPETRILTLV*LLHLLL
Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTGGACTTACGCCCTTTTCTATCCAACATGGGAATTTCCACCAGTGGTCTCTGCTGCCACTGTTTGGTATaGCTTCCAACTTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: LDLRPFLSNMGISTSGLCCHCLV*LPTLYF
Trigger: AAAATACAAAGTTGGAAGCAATACCAAACAGTGGCA...GCAGAGACCACTGGTGGAAATTCCCATGTTGGATAGAAAAGGGCGTAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTTTATCAAGTCCAGGTaGCATGGATCCAAAAAGAAT +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRFIKSR*HGSKKN
Trigger: ATTCTTTTTGGATCCATGCAACCTGGACTTGATAAA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTTTTCAGTTCTTGCCTaGGACACGCTGCTACACACA +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIFSVLA*DTLLHT
Trigger: TGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAA...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDQSFQF*PWTRCY
Trigger: GTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTG...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGACCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: RIQKLTVAGALISLQTLRPGLPS*YFVSMA
Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATGTGGCCTCACACATATGTGGTGCCTGCAGTTCCTGTAGCTGTTTTGAAGAGGTCCTTTTCTCTGATTTaGGCTGATTTATGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: MWPHTYVVPAVPVAVLKRSFSLI*ADLCVC
Trigger: ACACACACATAAATCAGCCAAAATCAGAGAAAAGGA...CCTCTTCAAAACAGCTACAGGAACTGCAGGCACCACATATGTGTGAGGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTTCAAGGGCCCAGGGAGCCTTCCATGTAGATGCAGCACCCTTACCTAATAGTGGTTACCTTTTAATGTaGGCTGACAAATGTATGAAC +
Preference number: 5 (lower is better)
Translates to: FSRAQGAFHVDAAPLPNSGYLLM*ADKCMN
Trigger: GTTCATACATTTGTCAGCCAACATTAAAAGGTAACC...ACTATTAGGTAAGGGTGCTGCATCTACATGGAAGGCTCCCTGGGCCCTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAAGGAACAACTGGCTTaGAGCTCTGCTCATCCATGC +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDKEQLA*SSAHPC
Trigger: GCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATAAGGCAAGGAAGCCCTaGGCAGATACCAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDKARKP*ADTKIS
Trigger: ACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTT...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAAGCTCAAAGAGACCCATaGTCTCTTCAAAATAACTTG +
Preference number: 5 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEAQRDP*SLQNNL
Trigger: CAAGTTATTTTGAAGAGACAATGGGTCTCTTTGAGC...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTAGAACTTCAAACCCCTaGATGAGTTTCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCRTSNP*MSFCLL
Trigger: AAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCT...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GATAGAGTAGGTAAGGGACTGGGGGTGGAGTTCTATTGGCAGAGGAATCTGAAGAAAGTAGGAAATGGTTaGATGCCTGACTATAAGTCA +
Preference number: 5 (lower is better)
Translates to: DRVGKGLGVEFYWQRNLKKVGNG*MPDYKS
Trigger: TGACTTATAGTCAGGCATCAAACCATTTCCTACTTT...CTTCAGATTCCTCTGCCAATAGAACTCCACCCCCAGTCCCTTACCTACTCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS GCA 90 bp GAATACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTTGGTATTaGTTCCAACTTTGTATTTTTCTGCCCACAGATATTTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: EYILPLGVVHATVWY*FQLCIFLPTDISIA
Trigger: AGCTATGGAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS-3UTR CAA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTA +
Preference number: 5 (lower is better)
Translates to: NISHCIKCFKGTTGFELCILTLV*LLHLLL
Trigger: TAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGAT...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGTATTGCTTCCAACTTaGTATTTTTCTGCCCACAGA +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFVLLPT*YFSAHR
Trigger: TCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATAC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CAACAGCTGGTGAGTGGGAGAACCTCATGTAAACAACCTCCTCTGAGTTCATTCTTTATCAAGTCCAGGTaGCATGGATCCAAAAAGAAT +
Preference number: 5 (lower is better)
Translates to: QQLVSGRTSCKQPPLSSFFIKSR*HGSKKN
Trigger: ATTCTTTTTGGATCCATGCAACCTGGACTTGATAAA...GAATGAACTCAGAGGAGGTTGTTTACATGAGGTTCTCCCACTCACCAGCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp AACTGTGTCTGTGGGGCATGTTCAAGCACCTACATGTTTGTTCCCCCACATGAATTTATCAAGTCCAGGTaGCATGGATCCAAAAAGAAT +
Preference number: 5 (lower is better)
Translates to: NCVCGACSSTYMFVPPHEFIKSR*HGSKKN
Trigger: ATTCTTTTTGGATCCATGCAACCTGGACTTGATAAA...TTCATGTGGGGGAACAAACATGTAGGTGCTTGAACATGCCCCACAGACACAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSLCKTL*SLTKVI
Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGAGACCTTCTTTGCTTaGCATACAGCCACCATAGTA +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYETFFA*HTATIV
Trigger: TACTATGGTGGCTGTATGCAAAGCAAAGAAGGTCTC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGAGACCTTCTTTGCTTaGCATACAGCCACCATAGTA +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIETFFA*HTATIV
Trigger: TACTATGGTGGCTGTATGCAAAGCAAAGAAGGTCTC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTGGAGTAACAGTTTCTTaGGGAGACCTTCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCGVTVS*GDLLCF
Trigger: AAAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCC...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAGAGGCCCAGAAATTTaGAACTCCACAAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLRGPEI*NSTKPC
Trigger: GCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCCAGAAGTTGGTGCTGTaGATAGCTGTGGCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLQKLVL*IAVAVY
Trigger: ATACACAGCCACAGCTATCAACAGCACCAACTTCTG...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNPGLPS*YFVSMA
Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLATLAM*VSQILL
Trigger: TAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGC...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATTTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYFHQVT*EGHLLK
Trigger: TTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAA...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACTTCCATCAGGTCACTTaGGAGGGACACCTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYFHQVT*EGHLLK
Trigger: TTTTAAGAGGTGTCCCTCCAAAGTGACCTGATGGAA...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTATCTATTCTTCTCACTaGGGCAGAAGATGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: INCGRCTDKPPDSESFICIYSSH*GRRWKQ
Trigger: CTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGAT...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACATCTATTCTTCTCACTaGGGCAGAAGATGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYIYSSH*GRRWKQ
Trigger: CTGCTTCCATCTTCTGCCCAAGTGAGAAGAATAGAT...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GTCACAAATACTAGGGCTACAACTGTGTCTGTGGGGCATGTTCAAGCACCTACACCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 5 (lower is better)
Translates to: VTNTRATTVSVGHVQAPTPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...TGTAGGTGCTTGAACATGCCCCACAGACACAGTTGTAGCCCTAGTATTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACATCATCTTCAACTGTaGTTGGAACTGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVHHLQL*LELDML
Trigger: CAACATGTCCAGTTCCAACAACAGTTGAAGATGATG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACATGCAGGAGAATCACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYMQENH*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTGATTCTCCTGCAT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCAAGCACCTACATGTTaGTTCCCCCACATGAATACA +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYQAPTC*FPHMNT
Trigger: TGTATTCATGTGGGGGAACAAACATGTAGGTGCTTG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS CCA 90 bp CAAAAAGAATACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGTATTTTTCTGCCCACAGATATTTCC +
Preference number: 5 (lower is better)
Translates to: QKEYILPLGVVHATV*YCFQLCIFLPTDIS
Trigger: GGAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTQSFQF*PWTRCY
Trigger: GTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTG...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYQSFQF*PWTRCY
Trigger: GTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTG...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACGGAGTAACAGTTTCTTaGGGAGACCTTCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYGVTVS*GDLLCF
Trigger: AAAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCC...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGTAAGAGCAACACGTTaGCGCATAACCAACATTATC +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIVRATR*RITNII
Trigger: GATAATGTTGGTTATGCGCAAACGTGTTGCTCTTAC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTACAGAAGTTGGTGCTGTaGATAGCTGTGGCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVQKLVL*IAVAVY
Trigger: ATACACAGCCACAGCTATCAACAGCACCAACTTCTG...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTACAGACTATCAGCACCTaGCCAAGGAATAACATAAAA +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVQTIST*PRNNIK
Trigger: TTTTATGTTATTCCTTGGCAAGGTGCTGATAGTCTG...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGACAGACTATCAGCACCTaGCCAAGGAATAACATAAAA +
Preference number: 5 (lower is better)
Translates to: RIQKLTVAGALISLQTLRQTIST*PRNNIK
Trigger: TTTTATGTTATTCCTTGGCAAGGTGCTGATAGTCTG...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGTATTGGCGCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGACCAGGGCTCCCATCATaGTATTTTGTATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: SIGARVRKGNHLNIPETRPGLPS*YFVSMA
Trigger: TGCCATTGATACAAAATACAATGATGGGAGCCCTGG...TCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGCGCCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTTCCTTTTCTCTGATTTaGGCTGATTTATGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFSFSLI*ADLCVC
Trigger: ACACACACATAAATCAGCCAAAATCAGAGAAAAGGA...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAAGGCAAGGAAGCCCTaGGCAGATACCAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTKARKP*ADTKIS
Trigger: ACTGATCTTGGTATCTGCCAAGGGCTTCCTTGCCTT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAACTGGCAGTTCTGGTTTaGGAACTGATCCCAGAATTC +
Preference number: 5 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKLAVLV*ELIPEF
Trigger: GAATTCTGGGATCAGTTCCAAAACCAGAACTGCCAG...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AGAATACAGAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGCTTTAGATTTTCTCTaGGCATATTCAAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: RIQKLTVAGALISLQTLRALDFL*AYSRVL
Trigger: CAAGACCCTTGAATATGCCAAGAGAAAATCTAAAGC...TCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTCTGTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTTGTCATCTTCAACTGTTGTaGGAACTGGACATGTTGACA +
Preference number: 5 (lower is better)
Translates to: INCGRCTDKPPDSESFICHLQLL*ELDMLT
Trigger: TGTCAACATGTCCAGTTCCAACAACAGTTGAAGATG...ACAAATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCATCTTCAACTGTTGTaGGAACTGGACATGTTGACA +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYHLQLL*ELDMLT
Trigger: TGTCAACATGTCCAGTTCCAACAACAGTTGAAGATG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCTCATCCATGCAAGGATTATACCATCATCTTCAACTGTaGTTGGAACTGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: CFKGTTGFELCSSMQGLYHHLQL*LELDML
Trigger: CAACATGTCCAGTTCCAACAACAGTTGAAGATGATG...GTATAATCCTTGCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACTCTGGATACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTGGACTACCCTTGAGTTaGCTAATTTATCATCATCTT +
Preference number: 5 (lower is better)
Translates to: NSGYSMNCQGEEHLPVCFGLPLS*LIYHHL
Trigger: AAGATGATGATAAATTAGCAAACTCAAGGGTAGTCC...AAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTATCCAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATGTATTGCTTCCAACTTaGTATTTTTCTGCCCACAGA +
Preference number: 5 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYVLLPT*YFSAHR
Trigger: TCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATAC...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTG +
Preference number: 5 (lower is better)
Translates to: ILQLNIVELWILNELPRRGPCHC*VLLPTL
Trigger: CAAAGTTGGAAGCAATACCAAACAGTGGCATGGACC...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCCTGTGTAAGACACTATaGTCACTGACAAAGGTGATC +
Preference number: 5 (lower is better)
Translates to: ARVRKGNHLNIPETRRESLCKTL*SLTKVI
Trigger: GATCACCTTTGTCAGTGACAATAGTGTCTTACACAG...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGTAAGAGCAACACGTTaGCGCATAACCAACATTATC +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDVRATR*RITNII
Trigger: GATAATGTTGGTTATGCGCAAACGTGTTGCTCTTAC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACAGAGGCCCAGAAATTTaGAACTCCACAAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYRGPEI*NSTKPC
Trigger: GCAAGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCT...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTCAGAAGTTGGTGCTGTaGATAGCTGTGGCTGTGTAT +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTQKLVL*IAVAVY
Trigger: ATACACAGCCACAGCTATCAACAGCACCAACTTCTG...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCTGGTCACTACTACAATaGACAATAGAGGACCCCAAT +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLWSLLQ*TIEDPN
Trigger: ATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCA...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTAAGGAACAACTGGCTTaGAGCTCTGCTCATCCATGC +
Preference number: 5 (lower is better)
Translates to: HEDSVLIILLFLQISVVSKEQLA*SSAHPC
Trigger: GCATGGATGAGCAGAGCTCAAAGCCAGTTGTTCCTT...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAGCCGAAGCCCAAGCACCGGAATTTTCAATGCTTTATGTTCCATGTTTCTGTCCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 5 (lower is better)
Translates to: EAEAQAPEFSMLYVPCFCPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...ACAGAAACATGGAACATAAAGCATTGAAAATTCCGGTGCTTGGGCTTCGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTGCTTTAGATTTTCTCTaGGCATATTCAAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIALDFL*AYSRVL
Trigger: CAAGACCCTTGAATATGCCAAGAGAAAATCTAAAGC...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAAATTCTATGAGCATTTaGAGTGTTCACAGACATGTG +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVNSMSI*SVHRHV
Trigger: CACATGTCTGTGAACACTCAAAATGCTCATAGAATT...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACTCAATGAATTGCCAAGGAGAGGAGCACCTGCCAGTGTGTTTTCAGATTGTAGGACTACCCTTGAGTTaGCTAATTTATCATCATCTT +
Preference number: 5 (lower is better)
Translates to: YSMNCQGEEHLPVCFQIVGLPLS*LIYHHL
Trigger: AAGATGATGATAAATTAGCAAACTCAAGGGTAGTCC...TACAATCTGAAAACACACTGGCAGGTGCTCCTCTCCTTGGCAATTCATTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TCAGTAAGTGCCTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGAACTTCAAACCCCTaGATGAGTTTCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SVSASSLTIIEKVWVPTYRTSNP*MSFCLL
Trigger: AAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCT...GTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAGGCACTTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TACATTCACAGACCACTTCTTACCAGTTCTAGGCAAGCCATTATAGTGCACTCGAAAGTAGGAAATGGTTaGATGCCTGACTATAAGTCA +
Preference number: 5 (lower is better)
Translates to: YIHRPLLTSSRQAIIVHSKVGNG*MPDYKS
Trigger: TGACTTATAGTCAGGCATCAAACCATTTCCTACTTT...CGAGTGCACTATAATGGCTTGCCTAGAACTGGTAAGAAGTGGTCTGTGAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAGCTATCCTATTATaGTCACATTCCTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIKAILL*SHSCGV
Trigger: TACCCCACAGGAATGTGACAATAATAGGATAGCTTT...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAAATTAACTGTGGCAGGTGCACTGATAAGCCTCCAGACTCTGAGAGTTTTATTCAAAAAGGCATCAGATaGAGAAATATGTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: EINCGRCTDKPPDSESFIQKGIR*RNMWHQ
Trigger: TTGGTGCCACATATTTCTCAATCTGATGCCTTTTTG...AATAAAACTCTCAGAGTCTGGAGGCTTATCAGTGCACCTGCCACAGTTAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCGTATTGCTTCCAACTTaGTATTTTTCTGCCCACAGA +
Preference number: 5 (lower is better)
Translates to: ARVRKGNHLNIPETRRESVLLPT*YFSAHR
Trigger: TCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATAC...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATTGCCACTGTTTGGTATaGCTTCCAACTTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYCHCLV*LPTLYF
Trigger: AAAATACAAAGTTGGAAGCAATACCAAACAGTGGCA...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AAGTCCTCTGAGAGCATAATGCTCCATCTGCAAAGTCTGCACTGTGTCAATAATCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA +
Preference number: 5 (lower is better)
Translates to: KSSESIMLHLQSLHCVNNPNIIS*LVITPL
Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...ATTATTGACACAGTGCAGACTTTGCAGATGGAGCATTATGCTCTCAGAGGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA +
Preference number: 5 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPNIIS*LVITPL
Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAA +
Preference number: 5 (lower is better)
Translates to: ILQLNIVELWILNELPRRKSPTV*MVATRK
Trigger: TTTGCGAGTGGCTACCATCAACACAGTAGGAGATTT...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCCAGACTATCAGCACCTaGCCAAGGAATAACATAAAA +
Preference number: 5 (lower is better)
Translates to: ARVRKGNHLNIPETRRESQTIST*PRNNIK
Trigger: TTTTATGTTATTCCTTGGCAAGGTGCTGATAGTCTG...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTGCTACTCTCGCAATGTaGGTTTCCCAGATCTTGCTA +
Preference number: 5 (lower is better)
Translates to: HEDSVLIILLFLQISVVSATLAM*VSQILL
Trigger: TAGCAAGATCTGGGAAACCAACATTGCGAGAGTAGC...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGGGACACCTCTTAAAATaGCTAGCTCCTGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: ENYSFKIATLAMLVSQILGHLLK*LAPGMS
Trigger: AGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCC...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACATGGGAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTCCAAGATCAGTGGTATaGGAAATAACTTACAATCAG +
Preference number: 5 (lower is better)
Translates to: NMGISTSGLCIYYCGRFIPRSVV*EITYNQ
Trigger: CTGATTGTAAGTTATTTCCAATACCACTGATCTTGG...AATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTCCCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAATCCCAGAATTCTACCTaGCAGGCTAGGAGATCTCTT +
Preference number: 5 (lower is better)
Translates to: IMELSVSFYREEVRKLQQSQNST*QARRSL
Trigger: AAGAGATCTCCTAGCCTGCAAGGTAGAATTCTGGGA...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGCTCAAAGAGACCCATaGTCTCTTCAAAATAACTTG +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDAQRDP*SLQNNL
Trigger: CAAGTTATTTTGAAGAGACAATGGGTCTCTTTGAGC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATTACACAGCTGCGAGAAATCAAGACACACCGATGTGTGTTTTCTGCTCATATAATTCTATGAGCATTTaGAGTGTTCACAGACATGTG +
Preference number: 5 (lower is better)
Translates to: HYTAARNQDTPMCVFCSYNSMSI*SVHRHV
Trigger: CACATGTCTGTGAACACTCAAAATGCTCATAGAATT...ATATGAGCAGAAAACACACATCGGTGTGTCTTGATTTCTCGCAGCTGTGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACCACGATACTCTGGTCACTACTACAATTGACAATAGAGGACCCCAATTAAAACATCATCTTCAACTGTaGTTGGAACTGGACATGTTG +
Preference number: 5 (lower is better)
Translates to: NHDTLVTTTIDNRGPQLKHHLQL*LELDML
Trigger: CAACATGTCCAGTTCCAACAACAGTTGAAGATGATG...TTTTAATTGGGGTCCTCTATTGTCAATTGTAGTAGTGACCAGAGTATCGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAGAACTTCAAACCCCTaGATGAGTTTCTGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTRTSNP*MSFCLL
Trigger: AAGCAGGCAGAAACTCATCAAGGGGTTTGAAGTTCT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAGAATTATTCTTTCAAAATAGCTACTCTCGCAATGTTGGTTTCCCAGATCTTGCAAGCACCTACATGTTaGTTCCCCCACATGAATACA +
Preference number: 5 (lower is better)
Translates to: ENYSFKIATLAMLVSQILQAPTC*FPHMNT
Trigger: TGTATTCATGTGGGGGAACAAACATGTAGGTGCTTG...CAAGATCTGGGAAACCAACATTGCGAGAGTAGCTATTTTGAAAGAATAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATCCACTTGGCTGTTGGTGGTTTGAGAAACTTGTTACATGCTTTCATTGAAGTATTGGCTGTTGGTGGTTaGAGAAACTTGTTACATGCT +
Preference number: 5 (lower is better)
Translates to: IHLAVGGLRNLLHAFIEVLAVGG*RNLLHA
Trigger: AGCATGTAACAAGTTTCTCAAACCACCAACAGCCAA...TACTTCAATGAAAGCATGTAACAAGTTTCTCAAACCACCAACAGCCAAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp GCTAGAGTGAGAAAAGGGAATCATTTAAACATACCCGAGACTAGAAGAGAAAGCAGAGGAAGTATAGCATaGATAAGGTGTTGGGGTAAT +
Preference number: 5 (lower is better)
Translates to: ARVRKGNHLNIPETRRESRGSIA*IRCWGN
Trigger: ATTACCCCAACACCTTATCAATGCTATACTTCCTCT...GCTTTCTCTTCTAGTCTCGGGTATGTTTAAATGATTCCCTTTTCTCACTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374724.1
CDS-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACGGAGTAACAGTTTCTTaGGGAGACCTTCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYGVTVS*GDLLCF
Trigger: AAAGCAAAGAAGGTCTCCCAAAGAAACTGTTACTCC...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTATGGAGCTCTCAGTATCTTTTTATAGGGAAGAAGTCAGAAAACTCCAACAAAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAA +
Preference number: 5 (lower is better)
Translates to: IMELSVSFYREEVRKLQQKSPTV*MVATRK
Trigger: TTTGCGAGTGGCTACCATCAACACAGTAGGAGATTT...TTGTTGGAGTTTTCTGACTTCTTCCCTATAAAAAGATACTGAGAGCTCCATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGGTTACCTTTTAATGTaGGCTGACAAATGTATGAAC +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDGYLLM*ADKCMN
Trigger: GTTCATACATTTGTCAGCCAACATTAAAAGGTAACC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TTTGGAGGGACACCTCTTAAAATTGCTAGCTCCTGGAATGTCTTCTGTTTTGATGAACAGCGATACTGTTaGGTGATACTAGATATTAGA +
Preference number: 5 (lower is better)
Translates to: FGGTPLKIASSWNVFCFDEQRYC*VILDIR
Trigger: TCTAATATCTAGTATCACCAAACAGTATCGCTGTTC...ATCAAAACAGAAGACATTCCAGGAGCTAGCAATTTTAAGAGGTGTCCCTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GAATTTCCACCAGTGGTCTCTGCATTTACTACTGTGGAAGGTTCATTAAAACTCAATTCTATGAGCATTTaGAGTGTTCACAGACATGTG +
Preference number: 5 (lower is better)
Translates to: EFPPVVSAFTTVEGSLKLNSMSI*SVHRHV
Trigger: CACATGTCTGTGAACACTCAAAATGCTCATAGAATT...GAGTTTTAATGAACCTTCCACAGTAGTAAATGCAGAGACCACTGGTGGAAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CTCCTCCTTAACCATTATAGAAAAAGTTTGGGTACCAACATACAGTTAAGCTACCATCTTCAACTGTTGTaGGAACTGGACATGTTGACA +
Preference number: 5 (lower is better)
Translates to: LLLNHYRKSLGTNIQLSYHLQLL*ELDMLT
Trigger: TGTCAACATGTCCAGTTCCAACAACAGTTGAAGATG...GTAGCTTAACTGTATGTTGGTACCCAAACTTTTTCTATAATGGTTAAGGAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp AACATTAGCCATTGCATTAAATGCTTTAAAGGAACAACTGGCTTTGAGCTCTGCAAAGCTATCCTATTATaGTCACATTCCTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: NISHCIKCFKGTTGFELCKAILL*SHSCGV
Trigger: TACCCCACAGGAATGTGACAATAATAGGATAGCTTT...GCAGAGCTCAAAGCCAGTTGTTCCTTTAAAGCATTTAATGCAATGGCTAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTTGGTTTCCCAGATCTaGCTAAGACATGAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLLVSQI*LRHELL
Trigger: TAAGAGCTCATGTCTTAGCAAGATCTGGGAAACCAA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAAAAGCTATCCTATTATaGTCACATTCCTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: ILQLNIVELWILNELPRRKAILL*SHSCGV
Trigger: TACCCCACAGGAATGTGACAATAATAGGATAGCTTT...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS GCA 90 bp GATTTAAATAATTTAGGCACTTTTCAAGACACCAAAGGCAACAAATaGAAGATTTCAGCACACATCGTGCACAAGCATTTTCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: DLNNLGTFQDTKGNK*KISAHIVHKHFPFL
Trigger: AAGGAAAGGAAAATGCTTGTGCACGATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGTGTCTTGAAAAGTGCCTAAATTATTTAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTTTTATCAAGTCCAGGTaGCATGGATCCAAAAAGAAT +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTFIKSR*HGSKKN
Trigger: ATTCTTTTTGGATCCATGCAACCTGGACTTGATAAA...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGCAGACTATCAGCACCTaGCCAAGGAATAACATAAAA +
Preference number: 5 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLQTIST*PRNNIK
Trigger: TTTTATGTTATTCCTTGGCAAGGTGCTGATAGTCTG...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp ATTCTTCAGTTAAACATCGTAGAACTCTGGATACTCAATGAATTGCCAAGGAGAGAACAGCGATACTGTTaGGTGATACTAGATATTAGA +
Preference number: 5 (lower is better)
Translates to: ILQLNIVELWILNELPRREQRYC*VILDIR
Trigger: TCTAATATCTAGTATCACCAAACAGTATCGCTGTTC...TCTCCTTGGCAATTCATTGAGTATCCAGAGTTCTACGATGTTTAACTGAAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTGCTTTAGATTTTCTCTaGGCATATTCAAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: HEDSVLIILLFLQISVVSALDFL*AYSRVL
Trigger: CAAGACCCTTGAATATGCCAAGAGAAAATCTAAAGC...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp TCACACTGGAGGATCAAAACATTAGCCAATTCTTCAGTTAAACATCGTAGAACTAAAGTAGGAAATGGTTaGATGCCTGACTATAAGTCA +
Preference number: 5 (lower is better)
Translates to: SHWRIKTLANSSVKHRRTKVGNG*MPDYKS
Trigger: TGACTTATAGTCAGGCATCAAACCATTTCCTACTTT...AGTTCTACGATGTTTAACTGAAGAATTGGCTAATGTTTTGATCCTCCAGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp CATGAAGATTCAGTGTTGATCATCTTGTTATTCCTTCAGATTAGTGTGGTTTCTCAAAAAGGCATCAGATaGAGAAATATGTGGCACCAA +
Preference number: 5 (lower is better)
Translates to: HEDSVLIILLFLQISVVSQKGIR*RNMWHQ
Trigger: TTGGTGCCACATATTTCTCAATCTGATGCCTTTTTG...AGAAACCACACTAATCTGAAGGAATAACAAGATGATCAACACTGAATCTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGTGCCACTGTTTGGTATaGCTTCCAACTTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLCHCLV*LPTLYF
Trigger: AAAATACAAAGTTGGAAGCAATACCAAACAGTGGCA...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS-3UTR CAA 90 bp GACATTACTTGTATGCATTTCCATAATACCGATCTAATTCACTGTCTAGTTCTGCCCAATATAATTTCTTaGCTGGTCATTACTCCACTA +
Preference number: 5 (lower is better)
Translates to: DITCMHFHNTDLIHCLVLPNIIS*LVITPL
Trigger: TAGTGGAGTAATGACCAGCAAAGAAATTATATTGGG...CAGAACTAGACAGTGAATTAGATCGGTATTATGGAAATGCATACAAGTAATGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000470972.5
CDS GCA 72 bp CGGCCTGGCACCGCACGGCTAGGCGGCGGCGGCGGCTaGAGCGGCGGCTGGTACTCAAGAGGCGGCGCGGCT +
Preference number: 6 (lower is better)
Translates to: RPGTARLGGGGG*SGGWYSRGGAA
Trigger: AGCCGCGCCGCCTCTTGAGTACCAGCCGCCGCTGCAGCCGCCGCCGCCGCCTAGCCGTGCGGTGCCAGGCCG
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CCA 72 bp CAGAACTTGCTCCCGAAGCCATCGGCTTTAGCTCTCTaGAATCAGCGACGCCTCCCTTACCAGCTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: QNLLPKPSALAL*NQRRLPYQLLS
Trigger: TGAAAGAAGCTGGTAAGGGAGGCGTCGCTGATTCCAGAGAGCTAAAGCCGATGGCTTCGGGAGCAAGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374720.8
ENST00000470972.5
CDS TCA 72 bp TCCAGAAGGGTTGGAAGACTAGCAGTGGCAAGTGAATaGAGACCTTGCCAGCTACGTGGAACAAGGCGATGG +
Preference number: 6 (lower is better)
Translates to: SRRVGRLAVASE*RPCQLRGTRRW
Trigger: CCATCGCCTTGTTCCACGTAGCTGGCAAGGTCTTCATTCACTTGCCACTGCTAGTCTTCCAACCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS TCA 72 bp AGCATTCTCCACCAGAATGACAAAGGCATCCTTTGCTaGGGTGCAGAAGTTGGTGCTGTTGATAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SILHQNDKGILC*GAEVGAVDSCG
Trigger: GCCACAGCTATCAACAGCACCAACTTCTGCACCTCAGCAAAGGATGCCTTTGTCATTCTGGTGGAGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp CAAATCAGGCCCACCACATGGTACCACCACATGTACTaGAGAGGCCCAGAAATTTTGAACTCCACAAAGCCT +
Preference number: 6 (lower is better)
Translates to: QIRPTTWYHHMY*RGPEILNSTKP
Trigger: AGGCTTTGTGGAGTTCAAAATTTCTGGGCCTCTGCAGTACATGTGGTGGTACCATGTGGTGGGCCTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp CAAATCTTACCACAAGCCTTATCAAAGAGGGTGGAGTaGATGTTCCAACAGAAGACATTACCCGCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: QILPQALSKRVE*MFQQKTLPAPS
Trigger: AGAAGGGGCGGGTAATGTCTTCTGTTGGAACATGCACTCCACCCTCTTTGATAAGGCTTGTGGTAAGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607701.1
CDS CCA 72 bp TGCAGCTACGGTCCTCCAGCGGCTTCCATTCTCGTTTaGAGCTATGTAATTGAAATCCAAGAAGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: CSYGPPAASILV*SYVIEIQEEDR
Trigger: TCTGTCTTCTTCTTGGATTTCAATTACATAGCTCCAAACGAGAATGGAAGCCGCTGGAGGACCGTAGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607692.1
CDS CAA 90 bp ACACACAGTGCTACAGACTTAATCTTCCGGTTTATCAAGTCCAGGTaGCATGGATCCAAAAAGAATACATACTTCCGCTGGGTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: THSATDLIFRFIKSR*HGSKKNTYFRWVWS
Trigger: GGACCACACCCAGCGGAAGTATGTATTCTTTTTGGATCCATGCAACCTGGACTTGATAAACCGGAAGATTAAGTCTGTAGCACTGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 90 bp ACCTTGCCAGCTACGTGGAACAAGGCGATGGTAAGAGCAACACGTTaGCGCATAACCAACATTATCAGGAATAAGATCACTGTGAACACT +
Preference number: 6 (lower is better)
Translates to: TLPATWNKAMVRATR*RITNIIRNKITVNT
Trigger: AGTGTTCACAGTGATCTTATTCCTGATAATGTTGGTTATGCGCAAACGTGTTGCTCTTACCATCGCCTTGTTCCACGTAGCTGGCAAGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS TCA 72 bp ACCATAGTACACCTGTGCCTCCAAGTGAACCGAGTATaGCCAGAATCGTTAAGATCCACACAAGTACTCTTG +
Preference number: 6 (lower is better)
Translates to: TIVHLCLQVNRV*PESLRSTQVLL
Trigger: CAAGAGTACTTGTGTGGATCTTAACGATTCTGGTCATACTCGGTTCACTTGGAGGCACAGGTGTACTATGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp TTTCAGTTCTTGCCTTGGACACGCTGCTACACACAGTaGTACAGACTTAATCTTCCGGTTTATCAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: FQFLPWTRCYTQ*YRLNLPVYQVQ
Trigger: CTGGACTTGATAAACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp ATCACTCAGAGTTTTCAGTTCTTGCCTTGGACACGCTaGTACACACAGTGCTACAGACTTAATCTTCCGGTT +
Preference number: 6 (lower is better)
Translates to: ITQSFQFLPWTR*YTQCYRLNLPV
Trigger: AACCGGAAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CCA 72 bp TACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTTaGTATTGCTTCCAACTTTGTATTTTTCTGCCCACA +
Preference number: 6 (lower is better)
Translates to: YILPLGVVHATV*YCFQLCIFLPT
Trigger: TGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CAA 72 bp ATACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTGTATTTTTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: IHTSAGCGPCHC*VLLPTLYFSAH
Trigger: GTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CAA 72 bp TGCAAACTTCTGAACATCACTCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTACACACAGTGCTACAGA +
Preference number: 6 (lower is better)
Translates to: CKLLNITQSFQF*PWTRCYTQCYR
Trigger: TCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGATGTTCAGAAGTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 72 bp GTCATTACTCCACTAATCAGCCTGTGTAAGACACTATaGTCACTGACAAAGGTGATCAGGGCCTCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: VITPLISLCKTL*SLTKVIRASAN
Trigger: GTTTGCAGAGGCCCTGATCACCTTTGTCAGTGACAATAGTGTCTTACACAGGCTGATTAGTGGAGTAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607701.1
CDS TCA 72 bp CCAGAAATTTTGAACTCCACAAAGCCTTGCTCATTCTaGACAGGACTGCCGGTAGTGCCAAGAAAAAGAAGT +
Preference number: 6 (lower is better)
Translates to: PEILNSTKPCSF*TGLPVVPRKRS
Trigger: ACTTCTTTTTCTTGGCACTACCGGCAGTCCTGTTCAGAATGAGCAAGGCTTTGTGGAGTTCAAAATTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CCA 72 bp CATGGATCCAAAAAGAATACATACTTCCGCTGGGTGTaGTCCATGCCACTGTTTGGTATTGCTTCCAACTTT +
Preference number: 6 (lower is better)
Translates to: HGSKKNTYFRWV*SMPLFGIASNF
Trigger: AAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTCTTTTTGGATCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CCA 72 bp CTTCTGAACATCACTCAGAGTTTTCAGTTCTTGCCTTaGACACGCTGCTACACACAGTGCTACAGACTTAAT +
Preference number: 6 (lower is better)
Translates to: LLNITQSFQFLP*TRCYTQCYRLN
Trigger: ATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGATGTTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 72 bp GCTACGTGGAACAAGGCGATGGTAAGAGCAACACGTTaGCGCATAACCAACATTATCAGGAATAAGATCACT +
Preference number: 6 (lower is better)
Translates to: ATWNKAMVRATR*RITNIIRNKIT
Trigger: AGTGATCTTATTCCTGATAATGTTGGTTATGCGCAAACGTGTTGCTCTTACCATCGCCTTGTTCCACGTAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 72 bp ACCTTGCCAAGGAATAACATAAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAAGCATTCTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: TLPRNNIKSPTV*MVATRKAFSTR
Trigger: TCTGGTGGAGAATGCTTTGCGAGTGGCTACCATCAACACAGTAGGAGATTTTATGTTATTCCTTGGCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 90 bp AGAATACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTTGGTATaGCTTCCAACTTTGTATTTTTCTGCCCACAGATATTTCCATAGC +
Preference number: 6 (lower is better)
Translates to: RIHTSAGCGPCHCLV*LPTLYFSAHRYFHS
Trigger: GCTATGGAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CAA 90 bp ACTATCAGCACCTTGCCAAGGAATAACATAAAATCTCCTACTGTGTaGATGGTAGCCACTCGCAAAGCATTCTCCACCAGAATGACAAAG +
Preference number: 6 (lower is better)
Translates to: TISTLPRNNIKSPTV*MVATRKAFSTRMTK
Trigger: CTTTGTCATTCTGGTGGAGAATGCTTTGCGAGTGGCTACCATCAACACAGTAGGAGATTTTATGTTATTCCTTGGCAAGGTGCTGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CCA 72 bp AGACTTAATCTTCCGGTTTATCAAGTCCAGGTTGCATaGATCCAAAAAGAATACATACTTCCGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: RLNLPVYQVQVA*IQKEYILPLGV
Trigger: CACACCCAGCGGAAGTATGTATTCTTTTTGGATCCATGCAACCTGGACTTGATAAACCGGAAGATTAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 72 bp AGATATTTCCATAGCTGTCGTATCCTGACACTAGTCTaGCTGCTGCACCTGTTGCTATTGAAAAGCCACAAA +
Preference number: 6 (lower is better)
Translates to: RYFHSCRILTLV*LLHLLLLKSHK
Trigger: TTTGTGGCTTTTCAATAGCAACAGGTGCAGCAGCAAGACTAGTGTCAGGATACGACAGCTATGGAAATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CAA 90 bp CCAAAAAGAATACATACTTCCGCTGGGTGTGGTCCATGCCACTGTTaGGTATTGCTTCCAACTTTGTATTTTTCTGCCCACAGATATTTC +
Preference number: 6 (lower is better)
Translates to: PKRIHTSAGCGPCHC*VLLPTLYFSAHRYF
Trigger: GAAATATCTGTGGGCAGAAAAATACAAAGTTGGAAGCAATACCAAACAGTGGCATGGACCACACCCAGCGGAAGTATGTATTCTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
ENST00000607692.1
CDS CAA 90 bp ATTTATCTCTGCAAACTTCTGAACATCACTCAGAGTTTTCAGTTCTaGCCTTGGACACGCTGCTACACACAGTGCTACAGACTTAATCTT +
Preference number: 6 (lower is better)
Translates to: IYLCKLLNITQSFQF*PWTRCYTQCYRLNL
Trigger: AAGATTAAGTCTGTAGCACTGTGTGTAGCAGCGTGTCCAAGGCAAGAACTGAAAACTCTGAGTGATGTTCAGAAGTTTGCAGAGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp CAAACTCCATCAGCACTTTATCCATATAGAATTCTCTaGCAGGGCTCCCATCATTGTATTTTGTATCAATGG +
Preference number: 6 (lower is better)
Translates to: QTPSALYPYRIL*QGSHHCILYQW
Trigger: CCATTGATACAAAATACAATGATGGGAGCCCTGGCAGAGAATTCTATATGGATAAAGTGCTGATGGAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS GCA 72 bp AATTTAGGCACTTTTCAAGACACCAAAGGCAACAAATaGAAGATTTCAGCACACATCGTGCACAAGCATTTT +
Preference number: 6 (lower is better)
Translates to: NLGTFQDTKGNK*KISAHIVHKHF
Trigger: AAAATGCTTGTGCACGATGTGTGCTGAAATCTTGCATTTGTTGCCTTTGGTGTCTTGAAAAGTGCCTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 90 bp CAAGTACTACCTAGTGATAACAAGCAAAGTCCCAATATAATTTCTTaGCTGGTCATTACTCCACTAATCAGCCTGTGTAAGACACTATTG +
Preference number: 6 (lower is better)
Translates to: QVLPSDNKQSPNIIS*LVITPLISLCKTLL
Trigger: CAATAGTGTCTTACACAGGCTGATTAGTGGAGTAATGACCAGCAAAGAAATTATATTGGGACTTTGCTTGTTATCACTAGGTAGTACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607701.1
CDS CAA 90 bp ATGGATAGAACTAGTGATAACAAGCAAAGTCCCAATATAATTTCTTaGCTGGTCATTACTCCACTAATCAGCCTGTGTAAGACACTATTG +
Preference number: 6 (lower is better)
Translates to: MDRTSDNKQSPNIIS*LVITPLISLCKTLL
Trigger: CAATAGTGTCTTACACAGGCTGATTAGTGGAGTAATGACCAGCAAAGAAATTATATTGGGACTTTGCTTGTTATCACTAGTTCTATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 90 bp CTTTATCCATATAGAATTCTCTGCCAGGGCTCCCATCATTGTATTTaGTATCAATGGCAAAACACAAGAATAATACATCCACTACCATTT +
Preference number: 6 (lower is better)
Translates to: LYPYRILCQGSHHCI*YQWQNTRIIHPLPF
Trigger: AAATGGTAGTGGATGTATTATTCTTGTGTTTTGCCATTGATACAAAATACAATGATGGGAGCCCTGGCAGAGAATTCTATATGGATAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5
CDS CAA 72 bp TATAGAATTCTCTGCCAGGGCTCCCATCATTGTATTTaGTATCAATGGCAAAACACAAGAATAATACATCCA +
Preference number: 6 (lower is better)
Translates to: YRILCQGSHHCI*YQWQNTRIIHP
Trigger: TGGATGTATTATTCTTGTGTTTTGCCATTGATACAAAATACAATGATGGGAGCCCTGGCAGAGAATTCTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374720.8
ENST00000374723.5
ENST00000374724.1
ENST00000470972.5