RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC43A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167703, ENSG00000278550

Ensembl transcript IDs: ENST00000301335.10, ENST00000382147.8, ENST00000412517.3, ENST00000571376.1, ENST00000571650.5, ENST00000572135.5, ENST00000572801.5, ENST00000574274.5, ENST00000574743.5, ENST00000575944.1, ENST00000576537.1, ENST00000576721.5, ENST00000576769.1, ENST00000612931.4, ENST00000613070.4, ENST00000616586.2, ENST00000631603.1, ENST00000632084.1, ENST00000632428.1, ENST00000632441.1, ENST00000633255.1, ENST00000633495.1, ENST00000633994.1, ENST00000634102.1, ENST00000634196.1

Found 1221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGGGCCTGTGGCCTTGGACAAGCTCCTGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCAGCTGCAGGCCTGGCGGCTCCCGCC +
Preference number: 1 (lower is better)
Translates to: LWACGLGQAPGPTPG*LLGTGPAAGLAAPA
Trigger: GGCGGGAGCCGCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp CCTTGGACAAGCTCCTGGCCCCACGCCAGGATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGCGGCTCCCGCCTGGTCAGTGGGGAT +
Preference number: 1 (lower is better)
Translates to: PWTSSWPHARMAPGH*PSCRPGGSRLVSGD
Trigger: ATCCCCACTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp GGTCTCAAGACACACTTCTGGGGGCAGTCAAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCC +
Preference number: 1 (lower is better)
Translates to: GLKTHFWGQSRWAGW*ARRTGLPRHQLQGP
Trigger: GGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp GGAGGTCTCAAGACACACTTCTGGGGGCAGTCAAGGTGGGCGGGTTaGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGC +
Preference number: 1 (lower is better)
Translates to: GGLKTHFWGQSRWAG*WARRTGLPRHQLQG
Trigger: GCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAGACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp CTCGGCCTGGGGTGGTGGCGCCTCGGTCTGAGAAGGGTCGAGGTCTaGGTGCTGCTAGTGGCCCTGGCTCAGTCTCAGAGCTGCCCGGAG +
Preference number: 1 (lower is better)
Translates to: LGLGWWRLGLRRVEV*VLLVALAQSQSCPE
Trigger: CTCCGGGCAGCTCTGAGACTGAGCCAGGGCCACTAGCAGCACCCAGACCTCGACCCTTCTCAGACCGAGGCGCCACCACCCCAGGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp GCTTGTGGCCCTCCTGCAGCGCCACCTGCTCCTTGGCACTCCTCATaGAGCTGCCCACACTCAGGCGCCGGCCCACCGTGGTCACCTGCT +
Preference number: 1 (lower is better)
Translates to: ACGPPAAPPAPWHSS*SCPHSGAGPPWSPA
Trigger: AGCAGGTGACCACGGTGGGCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR GCA 90 bp GGCCCTCCTGCAGCGCCACCTGCTCCTTGGCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGCCCACCGTGGTCACCTGCTTGTAGA +
Preference number: 1 (lower is better)
Translates to: GPPAAPPAPWHSSWS*PHSGAGPPWSPACR
Trigger: TCTACAAGCAGGTGACCACGGTGGGCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR CCA 90 bp GGATGGCAGCCCCCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GWQPPLLWQEAESRH*RESACLPGVPGSCC
Trigger: GCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR GCA 90 bp CTGGCAGGAGCCCCTCACCGCAGGAGGCCCACAACCCCTCCCAGCTaGATATCGGCTCACATTCACGCGGCTGCCACACAAGTGCGTCGG +
Preference number: 1 (lower is better)
Translates to: LAGAPHRRRPTTPPS*ISAHIHAAATQVRR
Trigger: CCGACGCACTTGTGTGGCAGCCGCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGAGGGGCTCCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCA +
Preference number: 1 (lower is better)
Translates to: FGKRQNPDTGGRAPA*RAFLAPAAGTTETP
Trigger: TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR GCA 90 bp CTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGAC +
Preference number: 1 (lower is better)
Translates to: LLWQEAESRHWRESA*LPGVPGSCCRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp GGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACCTGCTCCTTGGCACTCCTCATGGAG +
Preference number: 1 (lower is better)
Translates to: GWHFTSRSTVDRHSL*PSCSATCSLALLME
Trigger: CTCCATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR GCA 90 bp TTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTGGCACTCCTCATGGAGCTGCCCACA +
Preference number: 1 (lower is better)
Translates to: FTSRSTVDRHSLWPS*SATCSLALLMELPT
Trigger: TGTGGGCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR CCA 90 bp GGATCCACCAGGGCCTGCAACCACGTCTTTGGCCCCGGTGAGGGGTaGGACCTTGTGTATAGGTCCAGGCAGCAGCAGCTGCAGACAGAG +
Preference number: 1 (lower is better)
Translates to: GSTRACNHVFGPGEG*DLVYRSRQQQLQTE
Trigger: CTCTGTCTGCAGCTGCTGCTGCCTGGACCTATACACAAGGTCCCACCCCTCACCGGGGCCAAAGACGTGGTTGCAGGCCCTGGTGGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp CAGATAAGGGGAGCTGCTGCTGAAGGAGCCCGACGGCTGATTCTGTaGAGGCTTCTCAGAGCTCCTGGCAGGAGCCCCTCACCGCAGGAG +
Preference number: 1 (lower is better)
Translates to: QIRGAAAEGARRLIL*RLLRAPGRSPSPQE
Trigger: CTCCTGCGGTGAGGGGCTCCTGCCAGGAGCTCTGAGAAGCCTCCACAGAATCAGCCGTCGGGCTCCTTCAGCAGCAGCTCCCCTTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp CGGATTAACCCTTCAGGCTCCCTTCCGAGGGCCTGGGCGGGGTCTTaGGGCCGCTCCTGCCCAGGTGTTCTTTCCAGCAATGGAAAGGGA +
Preference number: 1 (lower is better)
Translates to: RINPSGSLPRAWAGS*GRSCPGVLSSNGKG
Trigger: TCCCTTTCCATTGCTGGAAAGAACACCTGGGCAGGAGCGGCCCCAAGACCCCGCCCAGGCCCTCGGAAGGGAGCCTGAAGGGTTAATCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR CCA 90 bp AGCTGCGGAAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTaGCCTTCAGGAGCTCTGTCCTCACCCAGGGATTGGGGTGAGTCA +
Preference number: 1 (lower is better)
Translates to: SCGRPPRWSVLHLLQ*PSGALSSPRDWGES
Trigger: TGACTCACCCCAATCCCTGGGTGAGGACAGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTTCCGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp CCTTCAGTGGCCTTCAGGAGCTCTGTCCTCACCCAGGGATTGGGGTaGGTCAGGGCATGGGGAAACAGGCTCACAGAGCCCACCTGCTCA +
Preference number: 1 (lower is better)
Translates to: PSVAFRSSVLTQGLG*VRAWGNRLTEPTCS
Trigger: TGAGCAGGTGGGCTCTGTGAGCCTGTTTCCCCATGCCCTGACTCACCCCAATCCCTGGGTGAGGACAGAGCTCCTGAAGGCCACTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 90 bp AGAGGCACGGTCCCGCAGCTGTATGAGGATGCGGTGTACAGGTGCTaGCTACGTGACCGTGCCTTGAGTCGCCCCACTCAGCAGAAACCT +
Preference number: 1 (lower is better)
Translates to: RGTVPQLYEDAVYRC*LRDRALSRPTQQKP
Trigger: AGGTTTCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCATCCTCATACAGCTGCGGGACCGTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR GCA 90 bp CCGGTGAGGGGTGGGACCTTGTGTATAGGTCCAGGCAGCAGCAGCTaGAGACAGAGGCCTAGAGGGTTTGGAGAAGGCCGACCACAAAGA +
Preference number: 1 (lower is better)
Translates to: PVRGGTLCIGPGSSS*RQRPRGFGEGRPQR
Trigger: TCTTTGTGGTCGGCCTTCTCCAAACCCTCTAGGCCTCTGTCTGCAGCTGCTGCTGCCTGGACCTATACACAAGGTCCCACCCCTCACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp CGAGTCAGCAGTCCCCCAGAGAGACGAAGAGCAGCTGGGCACGGCTaGAGCTGGTCGGTGGCAGAGAATCTTGTCCTGCCTTTTCTTCTC +
Preference number: 1 (lower is better)
Translates to: RVSSPPERRRAAGHG*SWSVAENLVLPFLL
Trigger: GAGAAGAAAAGGCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTCTCTGGGGGACTGCTGACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp TCAGAATCCCACAGTCTGTATTGGCGGAAGACGGGCTGGCACCCTTaGGTTAGGCCCCCAGTCGTTGGCACAGATAAGGGGAGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: SESHSLYWRKTGWHP*VRPPVVGTDKGSCC
Trigger: GCAGCAGCTCCCCTTATCTGTGCCAACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGTCTTCCGCCAATACAGACTGTGGGATTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp TCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGG +
Preference number: 1 (lower is better)
Translates to: SSTSTKAAVCMYGVP*RRSSNSLQVADRTR
Trigger: CCTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 90 bp AGCAGTCCCCCAGAGAGACGAAGAGCAGCTGGGCACGGCTGGAGCTaGTCGGTGGCAGAGAATCTTGTCCTGCCTTTTCTTCTCAAGCTC +
Preference number: 1 (lower is better)
Translates to: SSPPERRRAAGHGWS*SVAENLVLPFLLKL
Trigger: GAGCTTGAGAAGAAAAGGCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTCTCTGGGGGACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp TTCTCCTTTCATCCCCCTCCCTGCCGCCCACATCCTGAACTGCTCTaGGCCTGCAGAAGAACCCAGCGGGAATCTTCAGGGTTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: FSFHPPPCRPHPELL*ACRRTQRESSGLWK
Trigger: CTTCCACAACCCTGAAGATTCCCGCTGGGTTCTTCTGCAGGCTCAGAGCAGTTCAGGATGTGGGCGGCAGGGAGGGGGATGAAAGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 90 bp GCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAA +
Preference number: 1 (lower is better)
Translates to: AFRPPPQKQLCVCTG*PGGGPQIPFRWQTE
Trigger: TTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR GCA 90 bp CTCCCAGCTGCATATCGGCTCACATTCACGCGGCTGCCACACAAGTaGGTCGGAAACTCCACTTGGCTGAACGTGATTGTGCTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: LPAAYRLTFTRLPHK*VGNSTWLNVIVLLS
Trigger: AGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGAGCCGATATGCAGCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp TGGCTGAACGTGATTGTGCTGCTGTCTGGGACAGTCTTATGCACGTaGGCCCAATACTGGATGTCCCGCCATTTTCAGCCCTGGGGCCTA +
Preference number: 1 (lower is better)
Translates to: WLNVIVLLSGTVLCT*AQYWMSRHFQPWGL
Trigger: TAGGCCCCAGGGCTGAAAATGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGCACAATCACGTTCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp TGTATGAGGATGCGGTGTACAGGTGCTGCCTACGTGACCGTGCCTTaGGTCGCCCCACTCAGCAGAAACCTCACTCAGCAGAAACTTGTC +
Preference number: 1 (lower is better)
Translates to: CMRMRCTGAAYVTVP*VAPLSRNLTQQKLV
Trigger: GACAAGTTTCTGCTGAGTGAGGTTTCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCATCCTCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR CCA 90 bp CTCACACTTCTAAGATGTCTGCACAAGCCCAGTTTGTTTGGGGGTTaGGGAGGAAGGTCTTTTCCTGGCCCACTGTCCCTCCCGAGTCAG +
Preference number: 1 (lower is better)
Translates to: LTLLRCLHKPSLFGG*GGRSFPGPLSLPSQ
Trigger: CTGACTCGGGAGGGACAGTGGGCCAGGAAAAGACCTTCCTCCCCAACCCCCAAACAAACTGGGCTTGTGCAGACATCTTAGAAGTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp GTGCGTCGGAAACTCCACTTGGCTGAACGTGATTGTGCTGCTGTCTaGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCA +
Preference number: 1 (lower is better)
Translates to: VRRKLHLAERDCAAV*DSLMHVSPILDVPP
Trigger: TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp CTCACATTCACGCGGCTGCCACACAAGTGCGTCGGAAACTCCACTTaGCTGAACGTGATTGTGCTGCTGTCTGGGACAGTCTTATGCACG +
Preference number: 1 (lower is better)
Translates to: LTFTRLPHKCVGNST*LNVIVLLSGTVLCT
Trigger: CGTGCATAAGACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp GATTACAGGGATGAGCCACCTCGCTGGGACCAGACCTTACTTTCTTaGCTTGGCCACAAGTCTGTCCTGCTCAGAGCTGCTGAAAGTGGC +
Preference number: 1 (lower is better)
Translates to: DYRDEPPRWDQTLLS*LGHKSVLLRAAESG
Trigger: GCCACTTTCAGCAGCTCTGAGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGTGGCTCATCCCTGTAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp CTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTCAGAGCTGCTaGAAGTGGCTCTCCTGTTGTATGGGCTTGGGTGTGGTGTGGTGG +
Preference number: 1 (lower is better)
Translates to: LTFLTWPQVCPAQSC*KWLSCCMGLGVVWW
Trigger: CCACCACACCACACCCAAGCCCATACAACAGGAGAGCCACTTTCAGCAGCTCTGAGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp GGACCAGGATTCGCCTGTTTGGCTGGGAAAATCGGTAGAGGAGGGTaGCTCACACTTCTAAGATGTCTGCACAAGCCCAGTTTGTTTGGG +
Preference number: 1 (lower is better)
Translates to: GPGFACLAGKIGRGG*LTLLRCLHKPSLFG
Trigger: CCCAAACAAACTGGGCTTGTGCAGACATCTTAGAAGTGTGAGCCACCCTCCTCTACCGATTTTCCCAGCCAAACAGGCGAATCCTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 90 bp ATAAAGCCTAGGAGATATGTGTTCCAGGCGCCCAAGCTGTTAATGTaGAGCTTGAATGTGGCCTGGACCTGCCCTTTCCTCTTCTCCTTT +
Preference number: 1 (lower is better)
Translates to: IKPRRYVFQAPKLLM*SLNVAWTCPFLFSF
Trigger: AAAGGAGAAGAGGAAAGGGCAGGTCCAGGCCACATTCAAGCTCCACATTAACAGCTTGGGCGCCTGGAACACATATCTCCTAGGCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 90 bp GCCCCACTCAGCAGAAACCTCACTCAGCAGAAACTTGTCCACCAGTaGTTGATTATCTCGAGCAGCTATTTGGCCAAGTCTTACCAAAAC +
Preference number: 1 (lower is better)
Translates to: APLSRNLTQQKLVHQ*LIISSSYLAKSYQN
Trigger: GTTTTGGTAAGACTTGGCCAAATAGCTGCTCGAGATAATCAATCACTGGTGGACAAGTTTCTGCTGAGTGAGGTTTCTGCTGAGTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 2 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR TCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 2 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR TCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 2 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 2 (lower is better)
Translates to: GGPGGRASPVISSRAPRSGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TRVSGALSRPSTTELRGRGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 2 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSTCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 2 (lower is better)
Translates to: GGPGGRASPVISSRAPRSMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATGTGGGCCTGTGGCCTTaGACAAGCTCCTGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHVGLWP*TSSWPH
Trigger: GTGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCAC...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 2 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 2 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 2 (lower is better)
Translates to: LEDEGQTGGPATGACSFDAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 2 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 2 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 2 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: LEDEGQTGGPATGACSFDPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 2 (lower is better)
Translates to: LEDEGQTGGPATGACSFDTCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 2 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR TCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 2 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 2 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 2 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CAA 90 bp TCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTaGTGGCCCTCCTGCAGCGCCACCTGCTCCTTGGCACTCCTCATG +
Preference number: 2 (lower is better)
Translates to: SGWHFTSRSTVDRHS*WPSCSATCSLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR GCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 2 (lower is better)
Translates to: QARARQCKPLSSGRYGCGGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PLLWQEAESRHWRESACLGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CAA 90 bp GCCCAGGGCCACCAAGACAGTCCTCTAGACTTTGGTCTTCCCTCCTaGCCTCCTCGGCCTGGGGTGGTGGCGCCTCGGTCTGAGAAGGGT +
Preference number: 2 (lower is better)
Translates to: AQGHQDSPLDFGLPS*PPRPGVVAPRSEKG
Trigger: ACCCTTCTCAGACCGAGGCGCCACCACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAAAGTCTAGAGGACTGTCTTGGTGGCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GCTGCTGTCTGGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCATGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: AAVWDSLMHVSPILDVPPWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 2 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 2 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 2 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWTCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTGGGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 2 (lower is better)
Translates to: ASGWHFTSRSTVDRHSLWGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...CCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR CCA 90 bp GGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTGGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: GIRLALHLQVDGGQAQLVAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...CACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR CAA 90 bp ATTGGCGGAAGACGGGCTGGCACCCTTGAGTTAGGCCCCCAGTCGTaGGCACAGATAAGGGGAGCTGCTGCTGAAGGAGCCCGACGGCTG +
Preference number: 2 (lower is better)
Translates to: IGGRRAGTLELGPQS*AQIRGAAAEGARRL
Trigger: CAGCCGTCGGGCTCCTTCAGCAGCAGCTCCCCTTATCTGTGCCAACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGTCTTCCGCCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 2 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: GRQNEGDSENVSAALALGARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCCAGGACGATGCTGGGTaGAAGAGGGGACGGGGATGG +
Preference number: 2 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRQDDAG*KRGRGW
Trigger: CCATCCCCGTCCCCTCTTGCACCCAGCATCGTCCTG...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR GCA 90 bp CCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 2 (lower is better)
Translates to: PEQPAQTTRTTMKETPASSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...TGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 2 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CAA 90 bp AGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTaGATCAGCTGTAGTCCCTTCCCCTTCACAGGGCACTTGTCTTGC +
Preference number: 2 (lower is better)
Translates to: RMRGRREARPLVPAP*ISCSPFPFTGHLSC
Trigger: GCAAGACAAGTGCCCTGTGAAGGGGAAGGGACTACAGCTGATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCATCCTGAACTGCTCTaGGCCTGCAGAAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: LEDEGQTGGPATGACSFDHPELL*ACRRTQ
Trigger: CTGGGTTCTTCTGCAGGCTCAGAGCAGTTCAGGATG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp CCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTGGCCCTCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 2 (lower is better)
Translates to: PAGTSPPGRRWTGTACGPPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...AGGGCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR TCA 90 bp AGGAGGGGGCCACTGCGGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 2 (lower is better)
Translates to: RRGPLRHPAGTSPPGRRWRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...CCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGTGGCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR GCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 2 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 2 (lower is better)
Translates to: QARARQCKPLSSGRYGCGQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GTCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 2 (lower is better)
Translates to: VHVLRPREGLKGPVKEAVSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...AACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572801.5
ENST00000576721.5
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR GCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 2 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTCTCCTCGGCCTGGGGTaGTGGCGCCTCGGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPALLGLG*WRLGLR
Trigger: TCTCAGACCGAGGCGCCACCACCCCAGGCCGAGGAG...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR GCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 2 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCGGGTTTCTCCGAATCTaGAACTCCTGTGTGATGGCG +
Preference number: 2 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRGFLRI*NSCVMA
Trigger: CGCCATCACACAGGAGTTGCAGATTCGGAGAAACCC...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp AAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 2 (lower is better)
Translates to: KTSPEQPAQTTRTTMKETHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...TGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 2 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR TCA 90 bp AAAGCCCAGCCAGCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 2 (lower is better)
Translates to: KAQPAELDLHRVVHVLRPPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...GGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGCTGGCTGGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000572801.5
ENST00000576721.5
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR TCA 90 bp AAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACAGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 2 (lower is better)
Translates to: KTSPEQPAQTTRTTMKETAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...TGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
3UTR-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 2 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CAA 90 bp GCTCACATTCACGCGGCTGCCACACAAGTGCGTCGGAAACTCCACTaGGCTGAACGTGATTGTGCTGCTGTCTGGGACAGTCTTATGCAC +
Preference number: 2 (lower is better)
Translates to: AHIHAAATQVRRKLH*AERDCAAVWDSLMH
Trigger: GTGCATAAGACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 90 bp ACAGGGATGAGCCACCTCGCTGGGACCAGACCTTACTTTCTTGACTaGGCCACAAGTCTGTCCTGCTCAGAGCTGCTGAAAGTGGCTCTC +
Preference number: 2 (lower is better)
Translates to: TGMSHLAGTRPYFLD*ATSLSCSELLKVAL
Trigger: GAGAGCCACTTTCAGCAGCTCTGAGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGTGGCTCATCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 90 bp CTGTATGAGGATGCGGTGTACAGGTGCTGCCTACGTGACCGTGCCTaGAGTCGCCCCACTCAGCAGAAACCTCACTCAGCAGAAACTTGT +
Preference number: 2 (lower is better)
Translates to: LYEDAVYRCCLRDRA*SRPTQQKPHSAETC
Trigger: ACAAGTTTCTGCTGAGTGAGGTTTCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCATCCTCATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR-3UTR TCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTTCTCTCCCCCTCTTCTaGGAAGGCTCTTGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPASLPLF*EGSWLP
Trigger: TGGGAGCCAAGAGCCTTCTCAGAAGAGGGGGAGAGA...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp GCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCTCGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 2 (lower is better)
Translates to: AELDLHRVVHVLRPREGLAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...GAGCCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR GCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 2 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR GCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 2 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPALKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGCTGGAGCTGGTCGGTaGCAGAGAATCTTGTCCTGC +
Preference number: 2 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAAGAGR*QRILSC
Trigger: GCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR TCA 90 bp CACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 2 (lower is better)
Translates to: HEDDDEGDTSIIDELDSWPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR GCA 90 bp GACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTGACTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 2 (lower is better)
Translates to: DDEGDTSIIDELDSWKGDSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...GTCACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
3UTR-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGCAGCTGGGCACGGCTaGAGCTGGTCGGTGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LTSQNECSQEWACLSRSLAAGHG*SWSVAE
Trigger: CTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 2 (lower is better)
Translates to: LTSQNECSQEWACLSRSLRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 2 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR TCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 2 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
3UTR-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCAGGCTGGAGTGCAATaGTGCGATCTCGACTCACGG +
Preference number: 2 (lower is better)
Translates to: LTSQNECSQEWACLSRSLQAGVQ*CDLDSR
Trigger: CCGTGAGTCGAGATCGCACCATTGCACTCCAGCCTG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCCCAAGCTGTTAATGTaGAGCTTGAATGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LTSQNECSQEWACLSRSLPKLLM*SLNVAW
Trigger: CCAGGCCACATTCAAGCTCCACATTAACAGCTTGGG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 90 bp GAGCGTTGGCAAAGTGCTGTCAGTGCTGGCTGTAAGGAAACAGGCTaGACTTTTAACTCAGCCTTTCCCAAACTTGACTATAATACTTTC +
Preference number: 2 (lower is better)
Translates to: ERWQSAVSAGCKETG*TFNSAFPKLDYNTF
Trigger: GAAAGTATTATAGTCAAGTTTGGGAAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTACAGCCAGCACTGACAGCACTTTGCCAACGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 72 bp CAGCTCCAGGGCCCCACGGAGCCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTGGACAAGCTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: QLQGPTEPAGRG*CGPVALDKLLA
Trigger: GGCCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGGCTCCGTGGGGCCCTGGAGCTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 72 bp GGCAGGGAGCCCTTCCTGCTCCTTCCCGCCAGAGCCTaGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTG +
Preference number: 3 (lower is better)
Translates to: GREPFLLLPARA*RMRGRREARPL
Trigger: CAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAGGCTCTGGCGGGAAGGAGCAGGAAGGGCTCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp AGCCCTTCCTGCTCCTTCCCGCCAGAGCCTGGAGGATaGGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: SPSCSFPPEPGG*GADGRPGHWCL
Trigger: CAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAGGCTCTGGCGGGAAGGAGCAGGAAGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp CCTCCTGCAGCGCCACCTGCTCCTTGGCACTCCTCATaGAGCTGCCCACACTCAGGCGCCGGCCCACCGTGG +
Preference number: 3 (lower is better)
Translates to: PPAAPPAPWHSS*SCPHSGAGPPW
Trigger: CCACGGTGGGCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR GCA 72 bp AGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACA +
Preference number: 3 (lower is better)
Translates to: RQNPDTGGRAPA*RAFLAPAAGTT
Trigger: TGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 72 bp CCCCCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: PPLLWQEAESRH*RESACLPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 72 bp AAGACACACTTCTGGGGGCAGTCAAGGTGGGCGGGTTaGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAG +
Preference number: 3 (lower is better)
Translates to: KTHFWGQSRWAG*WARRTGLPRHQ
Trigger: CTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCCCCAGAAGTGTGTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR GCA 72 bp ACCAGGCTGAGCAGCAGGATGGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACTGCGGCATCCGGCTGG +
Preference number: 3 (lower is better)
Translates to: TRLSSRMGLNTL*MKEGATAASGW
Trigger: CCAGCCGGATGCCGCAGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCCCATCCTGCTGCTCAGCCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR CCA 72 bp CCTTCAGGCTCCCTTCCGAGGGCCTGGGCGGGGTCTTaGGGCCGCTCCTGCCCAGGTGTTCTTTCCAGCAAT +
Preference number: 3 (lower is better)
Translates to: PSGSLPRAWAGS*GRSCPGVLSSN
Trigger: ATTGCTGGAAAGAACACCTGGGCAGGAGCGGCCCCAAGACCCCGCCCAGGCCCTCGGAAGGGAGCCTGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR CCA 72 bp GTACGGATTAACCCTTCAGGCTCCCTTCCGAGGGCCTaGGCGGGGTCTTGGGGCCGCTCCTGCCCAGGTGTT +
Preference number: 3 (lower is better)
Translates to: VRINPSGSLPRA*AGSWGRSCPGV
Trigger: AACACCTGGGCAGGAGCGGCCCCAAGACCCCGCCCAGGCCCTCGGAAGGGAGCCTGAAGGGTTAATCCGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR GCA 72 bp GCCCCTCACCGCAGGAGGCCCACAACCCCTCCCAGCTaGATATCGGCTCACATTCACGCGGCTGCCACACAA +
Preference number: 3 (lower is better)
Translates to: APHRRRPTTPPS*ISAHIHAAATQ
Trigger: TTGTGTGGCAGCCGCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp TTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACCTGCTCCTTGGCACTC +
Preference number: 3 (lower is better)
Translates to: FTSRSTVDRHSL*PSCSATCSLAL
Trigger: GAGTGCCAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATTGGGGTCACCAGGGATaGCTCCCCCAAGTACCCATC +
Preference number: 3 (lower is better)
Translates to: LEDEGQTGGPATGACSFDWGHQG*LPQVPI
Trigger: GATGGGTACTTGGGGGAGCAATCCCTGGTGACCCCA...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp GGAGGGGGCCACTGCGGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGAAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 3 (lower is better)
Translates to: GGGHCGIRLALHLQVDGGRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...TCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGTGGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR CAA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 3 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATACAAGCCCAGTTTGTTaGGGGGTTGGGGAGGAAGGT +
Preference number: 3 (lower is better)
Translates to: LEDEGQTGGPATGACSFDTSPVC*GVGEEG
Trigger: ACCTTCCTCCCCAACCCCCAAACAAACTGGGCTTGT...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCGGGAATCTTCAGGGTaGTGGAAGGGTGTAGGGATG +
Preference number: 3 (lower is better)
Translates to: LEDEGQTGGPATGACSFDRESSG*WKGVGM
Trigger: CATCCCTACACCCTTCCACAACCCTGAAGATTCCCG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 72 bp GTCCCGCAGCTGTATGAGGATGCGGTGTACAGGTGCTaGCTACGTGACCGTGCCTTGAGTCGCCCCACTCAG +
Preference number: 3 (lower is better)
Translates to: VPQLYEDAVYRC*LRDRALSRPTQ
Trigger: CTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCATCCTCATACAGCTGCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR CCA 72 bp AGTCCCCCAGAGAGACGAAGAGCAGCTGGGCACGGCTaGAGCTGGTCGGTGGCAGAGAATCTTGTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: SPPERRRAAGHG*SWSVAENLVLP
Trigger: AGGCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTCTCTGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCACAGGGCACTTGTCTaGCTGGTTGGGGTCACCAGG +
Preference number: 3 (lower is better)
Translates to: KATQVECAAPPSVAFRSSHRALV*LVGVTR
Trigger: CCTGGTGACCCCAACCAGCAAGACAAGTGCCCTGTG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 72 bp AGCCACCGCGCCCGGCCAAATGCTACCATTGTTAAGTaGCAGGCGTCCCACCATGCGGGTCTTCACTGCGTA +
Preference number: 3 (lower is better)
Translates to: SHRARPNATIVK*QASHHAGLHCV
Trigger: TACGCAGTGAAGACCCGCATGGTGGGACGCCTGGCACTTAACAATGGTAGCATTTGGCCGGGCGCGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTGTGCTGGCTCTGACCTaGAACAAGCTCCTCCATCGC +
Preference number: 3 (lower is better)
Translates to: KATQVECAAPPSVAFRSSVLALT*NKLLHR
Trigger: GCGATGGAGGAGCTTGTTCAAGGTCAGAGCCAGCAC...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp GTGCACGGCAGGCAAGGAAGGTTTAAACGGAAGTTCTaGCCAGGACGATGCTGGGTGCAAGAGGGGACGGGG +
Preference number: 3 (lower is better)
Translates to: VHGRQGRFKRKF*PGRCWVQEGTG
Trigger: CCCCGTCCCCTCTTGCACCCAGCATCGTCCTGGTCAGAACTTCCGTTTAAACCTTCCTTGCCTGCCGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp CACAGTCTGTATTGGCGGAAGACGGGCTGGCACCCTTaGGTTAGGCCCCCAGTCGTTGGCACAGATAAGGGG +
Preference number: 3 (lower is better)
Translates to: HSLYWRKTGWHP*VRPPVVGTDKG
Trigger: CCCCTTATCTGTGCCAACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGTCTTCCGCCAATACAGACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp ATGCGGTGTACAGGTGCTGCCTACGTGACCGTGCCTTaGGTCGCCCCACTCAGCAGAAACCTCACTCAGCAG +
Preference number: 3 (lower is better)
Translates to: MRCTGAAYVTVP*VAPLSRNLTQQ
Trigger: CTGCTGAGTGAGGTTTCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR GCA 72 bp CCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGG +
Preference number: 3 (lower is better)
Translates to: PPPQKQLCVCTG*PGGGPQIPFRW
Trigger: CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR GCA 72 bp CCTTTCATCCCCCTCCCTGCCGCCCACATCCTGAACTaGTCTGAGCCTGCAGAAGAACCCAGCGGGAATCTT +
Preference number: 3 (lower is better)
Translates to: PFIPLPAAHILN*SEPAEEPSGNL
Trigger: AAGATTCCCGCTGGGTTCTTCTGCAGGCTCAGAGCAGTTCAGGATGTGGGCGGCAGGGAGGGGGATGAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 72 bp GGTGGGACCTTGTGTATAGGTCCAGGCAGCAGCAGCTaGAGACAGAGGCCTAGAGGGTTTGGAGAAGGCCGA +
Preference number: 3 (lower is better)
Translates to: GGTLCIGPGSSS*RQRPRGFGEGR
Trigger: TCGGCCTTCTCCAAACCCTCTAGGCCTCTGTCTGCAGCTGCTGCTGCCTGGACCTATACACAAGGTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCACTTGTCTTGCTGGTaGGGGTCACCAGGGATTGCT +
Preference number: 3 (lower is better)
Translates to: KATQVECAAPPSVAFRSSHLSCW*GSPGIA
Trigger: AGCAATCCCTGGTGACCCCAACCAGCAAGACAAGTG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp GCTGCTGTCTGGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCAGTGCTGGCTCTGACCTaGAACAAGCTCCTCCATCGC +
Preference number: 3 (lower is better)
Translates to: AAVWDSLMHVSPILDVPPVLALT*NKLLHR
Trigger: GCGATGGAGGAGCTTGTTCAAGGTCAGAGCCAGCAC...TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTTTTGGTCTTCCCTCCTaGCCTCCTCGGCCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAFGLPS*PPRPGV
Trigger: CACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAAA...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp TCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGAC +
Preference number: 3 (lower is better)
Translates to: STKAAVCMYGVP*RRSSNSLQVAD
Trigger: GTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 72 bp GACGAAGAGCAGCTGGGCACGGCTGGAGCTGGTCGGTaGCAGAGAATCTTGTCCTGCCTTTTCTTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: DEEQLGTAGAGR*QRILSCLFFSS
Trigger: GCTTGAGAAGAAAAGGCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp CCAGAGAGACGAAGAGCAGCTGGGCACGGCTGGAGCTaGTCGGTGGCAGAGAATCTTGTCCTGCCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: PERRRAAGHGWS*SVAENLVLPFL
Trigger: AAGAAAAGGCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp ACGCGGCTGCCACACAAGTGCGTCGGAAACTCCACTTaGCTGAACGTGATTGTGCTGCTGTCTGGGACAGTC +
Preference number: 3 (lower is better)
Translates to: TRLPHKCVGNST*LNVIVLLSGTV
Trigger: GACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp TTGGGGCCGCTCCTGCCCAGGTGTTCTTTCCAGCAATaGAAAGGGATTCAGCGAGGTAAGACGCTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LGPLLPRCSFQQ*KGIQRGKTLPL
Trigger: GAGGGGAAGCGTCTTACCTCGCTGAATCCCTTTCCATTGCTGGAAAGAACACCTGGGCAGGAGCGGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR-3UTR CAA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 3 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR CCA 72 bp GGTGTAGGGATGGAAAGGGACCAGGATTCGCCTGTTTaGCTGGGAAAATCGGTAGAGGAGGGTGGCTCACAC +
Preference number: 3 (lower is better)
Translates to: GVGMERDQDSPV*LGKSVEEGGSH
Trigger: GTGTGAGCCACCCTCCTCTACCGATTTTCCCAGCCAAACAGGCGAATCCTGGTCCCTTTCCATCCCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp TGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 3 (lower is better)
Translates to: CRGGVGPNHQGNKRGPKVARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...GACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR-3UTR CAA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 3 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR GCA 72 bp GCATATCGGCTCACATTCACGCGGCTGCCACACAAGTaGGTCGGAAACTCCACTTGGCTGAACGTGATTGTG +
Preference number: 3 (lower is better)
Translates to: AYRLTFTRLPHK*VGNSTWLNVIV
Trigger: CACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGAGCCGATATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 3 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
3UTR-3UTR CAA 90 bp GAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 3 (lower is better)
Translates to: EGLKGPVKEAVEENQPGARSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...TGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR TCA 72 bp GTGATTGTGCTGCTGTCTGGGACAGTCTTATGCACGTaGGCCCAATACTGGATGTCCCGCCATTTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: VIVLLSGTVLCT*AQYWMSRHFQP
Trigger: GGGCTGAAAATGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGCACAATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp TTGACTTGGCCACAAGTCTGTCCTGCTCAGAGCTGCTaGAAGTGGCTCTCCTGTTGTATGGGCTTGGGTGTG +
Preference number: 3 (lower is better)
Translates to: LTWPQVCPAQSC*KWLSCCMGLGV
Trigger: CACACCCAAGCCCATACAACAGGAGAGCCACTTTCAGCAGCTCTGAGCAGGACAGACTTGTGGCCAAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp AGGAGATATGTGTTCCAGGCGCCCAAGCTGTTAATGTaGAGCTTGAATGTGGCCTGGACCTGCCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: RRYVFQAPKLLM*SLNVAWTCPFL
Trigger: GAGGAAAGGGCAGGTCCAGGCCACATTCAAGCTCCACATTAACAGCTTGGGCGCCTGGAACACATATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CCA 72 bp TTCGCCTGTTTGGCTGGGAAAATCGGTAGAGGAGGGTaGCTCACACTTCTAAGATGTCTGCACAAGCCCAGT +
Preference number: 3 (lower is better)
Translates to: FACLAGKIGRGG*LTLLRCLHKPS
Trigger: ACTGGGCTTGTGCAGACATCTTAGAAGTGTGAGCCACCCTCCTCTACCGATTTTCCCAGCCAAACAGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCTGTTTAACTCCCAGATaGTTATCAAGTCAAGGACAA +
Preference number: 3 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRCLTPR*LSSQGQ
Trigger: TTGTCCTTGACTTGATAACAATCTGGGAGTTAAACA...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR-3UTR CAA 90 bp CACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 3 (lower is better)
Translates to: HEDDDEGDTSIIDELDSWRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...CCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
3UTR TCA 72 bp CAAATGATTCCATGCAGTAGCTCTCTCCCCCTCTTCTaGGAAGGCTCTTGGCTCCCAGAAACGGAAACCATG +
Preference number: 3 (lower is better)
Translates to: QMIPCSSSLPLF*EGSWLPETETM
Trigger: CATGGTTTCCGTTTCTGGGAGCCAAGAGCCTTCTCAGAAGAGGGGGAGAGAGCTACTGCATGGAATCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR GCA 72 bp AAGAAAAGTGAACGAGAGAAGAGTTTCTTAAGGCTTTaGTCGGAGAGGGCTTCGGAGAAGGGTGGGGTCAGC +
Preference number: 3 (lower is better)
Translates to: KKSEREKSFLRL*SERASEKGGVS
Trigger: GCTGACCCCACCCTTCTCCGAAGCCCTCTCCGAGCAAAGCCTTAAGAAACTCTTCTCTCGTTCACTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR CCA 72 bp AAACTCCACTTGGCTGAACGTGATTGTGCTGCTGTCTaGGACAGTCTTATGCACGTGAGCCCAATACTGGAT +
Preference number: 3 (lower is better)
Translates to: KLHLAERDCAAV*DSLMHVSPILD
Trigger: ATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp GAAACCTCACTCAGCAGAAACTTGTCCACCAGTGATTaGTTATCTCGAGCAGCTATTTGGCCAAGTCTTACC +
Preference number: 3 (lower is better)
Translates to: ETSLSRNLSTSD*LSRAAIWPSLT
Trigger: GGTAAGACTTGGCCAAATAGCTGCTCGAGATAATCAATCACTGGTGGACAAGTTTCTGCTGAGTGAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR TCA 72 bp AGCAGAAACCTCACTCAGCAGAAACTTGTCCACCAGTaGTTGATTATCTCGAGCAGCTATTTGGCCAAGTCT +
Preference number: 3 (lower is better)
Translates to: SRNLTQQKLVHQ*LIISSSYLAKS
Trigger: AGACTTGGCCAAATAGCTGCTCGAGATAATCAATCACTGGTGGACAAGTTTCTGCTGAGTGAGGTTTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301335.10
3UTR TCA 72 bp AAAGTGCTGTCAGTGCTGGCTGTAAGGAAACAGGCTTaGCTTTTAACTCAGCCTTTCCCAAACTTGACTATA +
Preference number: 3 (lower is better)
Translates to: KVLSVLAVRKQA*LLTQPFPNLTI
Trigger: TATAGTCAAGTTTGGGAAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTACAGCCAGCACTGACAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR TCA 72 bp ATCTCTAGGCCTCGTTTTTCAGTTGTAAAGCAGGGATaGTCATATGTGTTTAACTCCCAGATTGTTATCAAG +
Preference number: 3 (lower is better)
Translates to: ISRPRFSVVKQG*SYVFNSQIVIK
Trigger: CTTGATAACAATCTGGGAGTTAAACACATATGATCATCCCTGCTTTACAACTGAAAAACGAGGCCTAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGGTGGCGCCTCGGTCTaGGAAGGGTCGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSGGASV*EGSRSG
Trigger: CCCAGACCTCGACCCTTCTCAGACCGAGGCGCCACC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGGCGCCGATGGGCAGTaGCCAGGGTGGGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIGADGQ*PGWAPW
Trigger: CCATGGCGCCCACCCTGGCCACTGCCCATCGGCGCC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPPAGRG*CGPVAL
Trigger: CAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGTGGGCCTGTGGCCTTaGACAAGCTCCTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSVGLWP*TSSWPH
Trigger: GTGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCAC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRWAGW*ARRTGL
Trigger: GAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCT...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCTCAAGGTGGGCGGGTTaGTGGGCCAGGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVISRWAG*WARRTG
Trigger: GCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGA...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATTCAAGGTGGGCGGGTTaGTGGGCCAGGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHSRWAG*WARRTG
Trigger: GCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGA...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGTCCCTTCCGAGGGCCTaGGCGGGGTCTTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQSLPRA*AGSWGR
Trigger: GCGGCCCCAAGACCCCGCCCAGGCCCTCGGAAGGGA...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCGGCTCTGCACCACCTaGGACACCCCGAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRLCTT*DTPSPR
Trigger: CCGCGGGCTCGGGGTGTCCCAGGTGGTGCAGAGCCG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACGGCTCTGCACCACCTaGGACACCCCGAGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPRLCTT*DTPSPR
Trigger: CCGCGGGCTCGGGGTGTCCCAGGTGGTGCAGAGCCG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPGPTPG*LLGTGP
Trigger: TGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGGTGCTGTGGGCCTGTaGCCTTGGACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSGAVGL*PWTSSW
Trigger: CCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCCTGGGCCTGGCAGCTaGGCCAGCCGTTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSPGPGS*ASRSSS
Trigger: GCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCCTGGGCCTGGCAGCTaGGCCAGCCGTTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSPGPGS*ASRSSS
Trigger: GCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCACCCAGGGATTGGGGTaGGTCAGGGCATGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSTQGLG*VRAWGN
Trigger: GTTTCCCCATGCCCTGACTCACCCCAATCCCTGGGT...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGGTGGCGCCTCGGTCTaGGAAGGGTCGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSGGASV*EGSRSG
Trigger: CCCAGACCTCGACCCTTCTCAGACCGAGGCGCCACC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGGCCTGCAGCAGGACTaGCATCGCCTGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPGLQQD*HRLGPA
Trigger: TGCTGGCCCCAGGCGATGTCAGTCCTGCTGCAGGCC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCTCCGGCTCCGGCTCTaGACCACCCGGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPLRLRL*TTRLLR
Trigger: CCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301335.10
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPPAGRG*CGPVAL
Trigger: CAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCGCAGGGAGCCCTTCCTaGTCCTTCCCGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPAGSPS*SFPPEP
Trigger: AGGCTCTGGCGGGAAGGAGCAGGAAGGGCTCCCTGC...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGCGGTGTACAGGTGCTaGCTACGTGACCGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSAVYRC*LRDRAL
Trigger: CAAGGCACGGTCACGTAGGCAGCACCTGTACACCGC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGCCGGCTCGTACCGCTaGCCTCCGCTACGACAGAGC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSAGSYR*PPLRQS
Trigger: GCTCTGTCGTAGCGGAGGGCAGCGGTACGAGCCGGC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSTCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGCAGCTGGGCACGGCTaGAGCTGGTCGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPAAGHG*SWSVAE
Trigger: CTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCTCGGCCTGGGGTGGTaGCGCCTCGGTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQLGLGW*RLGLRR
Trigger: CCTTCTCAGACCGAGGCGCCACCACCCCAGGCCGAG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCACGGGCTGGCACCCTTaGGTTAGGCCCCCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPTGWHP*VRPPVV
Trigger: AACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGT...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATACGGGCTGGCACCCTTaGGTTAGGCCCCCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHTGWHP*VRPPVV
Trigger: AACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGTGGCAGGAAGAGGGCTaGGCTGCGGAAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQWQEEG*AAEGHP
Trigger: TGGGTGGCCTTCCGCAGCTCAGCCCTCTTCCTGCCA...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGCATGGAACGCAGCGTaGGGTGGGCAGGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSAWNAA*GGQGQI
Trigger: GATCTGCCCCTGCCCACCTCACGCTGCGTTCCATGC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGCAGGGAGCCCTTCCTaGTCCTTCCCGCCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSAGSPS*SFPPEP
Trigger: AGGCTCTGGCGGGAAGGAGCAGGAAGGGCTCCCTGC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCCAGGCAGCAGCAGCTaGAGACAGAGGCCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHPGSSS*RQRPRG
Trigger: CCCTCTAGGCCTCTGTCTGCAGCTGCTGCTGCCTGG...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCTCCGGCTCCGGCTCTaGACCACCTGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPLRLRL*TTWDTP
Trigger: CGGGGTGTCCCAGGTGGTGCAGAGCCGGAGCCGGAG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGGCGCCGATGGGCAGTaGCCAGGGTGGGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAGADGQ*PGWAPW
Trigger: CCATGGCGCCCACCCTGGCCACTGCCCATCGGCGCC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCAGGCGCCGATGGGCAGTaGCCAGGGTGGGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SPEQPAQTTRTTMKETPAGADGQ*PGWAPW
Trigger: CCATGGCGCCCACCCTGGCCACTGCCCATCGGCGCC...TGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGCGCCGATGGGCAGTaGCCAGGGTGGGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGADGQ*PGWAPW
Trigger: CCATGGCGCCCACCCTGGCCACTGCCCATCGGCGCC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NQPGAAGPDHEDDDEGDTHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...GGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGAGGCAGGTACGGCTGTaGGCATGCAGCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRQVRL*ACSRGA
Trigger: TGCCCCTCGGCTGCATGCCCACAGCCGTACCTGCCT...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACTGGCGGCTCCCGCCTaGTCAGTGGGGATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPLAAPA*SVGIRA
Trigger: AGCCCTTATCCCCACTGACCAGGCGGGAGCCGCCAG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAARWAGW*ARRTGL
Trigger: GAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTTCAAGGTGGGCGGGTTaGTGGGCCAGGCGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPSRWAG*WARRTG
Trigger: GCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGA...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGAACGCAGCGTGAGGTaGGCAGGGGCAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQERSVR*AGADPR
Trigger: CCTCGGATCTGCCCCTGCCCACCTCACGCTGCGTTC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR TCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCCGCGGTGCCGGAGTaGGGGCTGAGCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAAAVPE*GLSAEQ
Trigger: CTGCTCAGCGCTCAGCCCTCACTCCGGCACCGCGGC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCCGCGGTGCCGGAGTaGGGGCTGAGCGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRAAVPE*GLSAEQ
Trigger: CTGCTCAGCGCTCAGCCCTCACTCCGGCACCGCGGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCTCCGGCTCCGGCTCTaGACCACCCGGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSLRLRL*TTRLLR
Trigger: CCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301335.10
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: NQPGAAGPDHEDDDEGDTLVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...GGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGLVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVISWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGGCCACTGCGGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGHCGIRLALHLQVDGGHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...TCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGTGGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACTGGACCTCCACGTCTaGCGGCCACAGCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPLDLHV*RPQPFV
Trigger: GACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRPAGRG*CGPVAL
Trigger: CAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGTTGGTCTTCCCTCCTTaGCTCCTCGGCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQLVFPP*LLGLGW
Trigger: CCACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAA...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCACCTCCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHHLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTG...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCAGGCGCCGATGGGCAGTaGCCAGGGTGGGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PEQPAQTTRTTMKETPASGADGQ*PGWAPW
Trigger: CCATGGCGCCCACCCTGGCCACTGCCCATCGGCGCC...TGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp GATGAGCCGCAGCTGCGTGACGCACATGGTGACCAGGCTGAGCAGCAGGATGGGCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DEPQLRDAHGDQAEQQDGHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...CCCATCCTGCTGCTCAGCCTGGTCACCATGTGCGTCACGCAGCTGCGGCTCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCATCTCGTCCTGGGCCTaGCAGCTGAGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSISSWA*QLSQPF
Trigger: GAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGAT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAATCTCGTCCTGGGCCTaGCAGCTGAGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPISSWA*QLSQPF
Trigger: GAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGAT...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCCGGCCTCCAACGGGTaGGCAGGCCCTGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAPASNG*AGPGQA
Trigger: CGCCTGTCCAGGGCCTGCCCACCCGTTGGAGGCCGG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVTCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGGPTPG*LLGTGP
Trigger: TGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCC...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATTTGGGTGTGGTGTGGTaGCCCTTTCCCTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHLGVVW*PFPCPS
Trigger: GCTGGGACAGGGAAAGGGCCACCACACCACACCCAA...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGGGCCTCGAGGGCTaGCGGAGGGGAAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAAGLEG*RRGRTP
Trigger: TGGGGTCCTTCCCCTCCGCCAGCCCTCGAGGCCCGC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
3UTR CAA 72 bp GGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGQARARQCKP*SSGRYGCGHAA
Trigger: GGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCAGAGCCTGGAGGATaGGGGGCAGACGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPEPGG*GADGRP
Trigger: GGGCCTCCCGTCTGCCCCTCATCCTCCAGGCTCTGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMLVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDQLTSS*PGSAVP
Trigger: CGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCATCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGPAGRG*CGPVAL
Trigger: CAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGG...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGCCCACATCCTGAACTaGTCTGAGCCTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSAHILN*SEPAEE
Trigger: TTCTTCTGCAGGCTCAGAGCAGTTCAGGATGTGGGC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGGGTTTCTCCGAATCTaGAACTCCTGTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSGFLRI*NSCVMA
Trigger: CGCCATCACACAGGAGTTGCAGATTCGGAGAAACCC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGGCCACTGCGGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGHCGIRLALHLQVDGGPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...TCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGTGGCCCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATAGGCCAACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHRPTVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTTGGCCT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGACGTGTCCGCGGCATTaGCCCTCGGGGAGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRATCPRH*PSGRRR
Trigger: TCGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEGPTPG*LLGTGP
Trigger: TGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRRWAGW*ARRTGL
Trigger: GAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGCAGCTGGGCACGGCTaGAGCTGGTCGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAAAGHG*SWSVAE
Trigger: CTCTGCCACCGACCAGCTCCAGCCGTGCCCAGCTGC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGGAAGGCCACCCAGGTaGAGTGTGCTGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSGRPPR*SVLHLL
Trigger: AAGGAGGTGCAGCACACTCCACCTGGGTGGCCTTCC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGGAAGGCCACCCAGGTaGAGTGTGCTGCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPGRPPR*SVLHLL
Trigger: AAGGAGGTGCAGCACACTCCACCTGGGTGGCCTTCC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGAACGCAGCGTGAGGTaGGCAGGGGCAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVERSVR*AGADPR
Trigger: CCTCGGATCTGCCCCTGCCCACCTCACGCTGCGTTC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGAGGACTGACATCGCCTaGGGCCAGCATGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRRTDIA*GQHGTQ
Trigger: CTGCGTTCCATGCTGGCCCCAGGCGATGTCAGTCCT...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACCG +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSGARRR*RCRGQP
Trigger: CGGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
3UTR CAA 72 bp CCCTTCAGGCTCCCTTCCGAGGGCCTGGGCGGGGTCTaGGGGCCGCTCCTGCCCAGGTGTTCTTTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PFRLPSEGLGGV*GPLLPRCSFQQ
Trigger: TTGCTGGAAAGAACACCTGGGCAGGAGCGGCCCCAAGACCCCGCCCAGGCCCTCGGAAGGGAGCCTGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCTGGGCCTGGCAGCTaGGCCAGCCGTTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPGPGS*ASRSSS
Trigger: GCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCCAGAGCCTGGAGGATaGGGGGCAGACGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRPEPGG*GADGRP
Trigger: GGGCCTCCCGTCTGCCCCTCATCCTCCAGGCTCTGG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCGTCTTTGGCCCCGGTaGGGGGTGGGACCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPRLWPR*GVGPCV
Trigger: TACACAAGGTCCCACCCCTCACCGGGGCCAAAGACG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTAAGGGGAGCTGCTGCTaGAGGAGCCCGACGGCTGAT +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPKGSCC*RSPTAD
Trigger: ATCAGCCGTCGGGCTCCTTCAGCAGCAGCTCCCCTT...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCAGGTGCTGCCTACGTaGCCGTGCCTTGAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGQVLPT*PCLESP
Trigger: GGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCACTCCGAGGTAAACTaGGGCATGGAGGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPHSEVN*GMEARR
Trigger: CCTTCTTGCCTCCATGCCTCAGTTTACCTCGGAGTG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGCTCCGGCTCCGGCTCTaGACCACCCGGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAELRLRL*TTRLLR
Trigger: CCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAG...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301335.10
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCTCCTCCGGCTCCGGCTCTaGACCACCCGGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: AELDLHRVVHVLRPREGLLRLRL*TTRLLR
Trigger: CCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAG...GAGCCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCACTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHALVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSSLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGTACGGCTGTGGGCATaGAGCCGAGGGGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRVRLWA*SRGAGG
Trigger: GCCACCTGCCCCTCGGCTGCATGCCCACAGCCGTAC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACGGCTGCCACACAAGTaGGTCGGAAACTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPRLPHK*VGNSTW
Trigger: CCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGGAAGAGGGCTGAGCTaGGGAAGGCCACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDGRGLS*GRPPRW
Trigger: CCACCTGGGTGGCCTTCCGCAGCTCAGCCCTCTTCC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTATCTCGTCCTGGGCCTaGCAGCTGAGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPISSWA*QLSQPF
Trigger: GAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGAT...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAADRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: NQPGAAGPDHEDDDEGDTDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...GGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGAGGCAGGTACGGCTGTaGGCATGCAGCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGRQVRL*ACSRGA
Trigger: TGCCCCTCGGCTGCATGCCCACAGCCGTACCTGCCT...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGAGGCAGGTACGGCTGTaGGCATGCAGCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRARQVRL*ACSRGA
Trigger: TGCCCCTCGGCTGCATGCCCACAGCCGTACCTGCCT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRGPTPG*LLGTGP
Trigger: TGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCC...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGGTGCTGTGGGCCTGTaGCCTTGGACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVGAVGL*PWTSSW
Trigger: CCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWRWAGW*ARRTGL
Trigger: GAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQLKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCTCGGCCTGGGGTGGTaGCGCCTCGGTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMLGLGW*RLGLRR
Trigger: CCTTCTCAGACCGAGGCGCCACCACCCCAGGCCGAG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCTCCTCGGCCTGGGGTaGTGGCGCCTCGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNELLGLG*WRLGLR
Trigger: TCTCAGACCGAGGCGCCACCACCCCAGGCCGAGGAG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCCTTGCCTCCTCGGCCTaGGGTGGTGGCGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRLASSA*GGGASV
Trigger: GACCGAGGCGCCACCACCCCAGGCCGAGGAGGCAAG...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCAGCTGCCTTCTTCCTaGGCACTGAAAACGATGCTA +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSQLPSS*ALKTML
Trigger: TAGCATCGTTTTCAGTGCCCAGGAAGAAGGCAGCTG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCTGTTGTATGGGCTTaGGTGTGGTGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPVVWA*VWCGGP
Trigger: AGGGCCACCACACCACACCCAAGCCCATACAACAGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCTGGGCCTGGCAGCTaGGCCAGCCGTTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGPGPGS*ASRSSS
Trigger: GCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCCTGGGCCTGGCAGCTaGGCCAGCCGTTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRPGPGS*ASRSSS
Trigger: GCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GGPGGRASPVISSRAPRSAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCTGCTCAGAGCTGCTaGAAGTGGCTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPAQSC*KWLSCC
Trigger: ACAACAGGAGAGCCACTTTCAGCAGCTCTGAGCAGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGCTGTTGCCTTCGGCTaGCCTCCCCATGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSAVAFG*PPHGPA
Trigger: CGCTGGACCATGGGGAGGTCAGCCGAAGGCAACAGC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCTGTTGCCTTCGGCTaGCCTCCCCATGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRAVAFG*PPHGPA
Trigger: CGCTGGACCATGGGGAGGTCAGCCGAAGGCAACAGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGGCCTGCAGCAGGACTaGCATCGCCTGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGGLQQD*HRLGPA
Trigger: TGCTGGCCCCAGGCGATGTCAGTCCTGCTGCAGGCC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAELVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLQLTSS*PGSAVP
Trigger: CGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTATCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTGGGAGAGCGCCTGCCTaGCGGGCGTTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSGRAPA*RAFLAP
Trigger: AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCC...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCTGGACCTCCACGTCTaGCGGCCACAGCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAALDLHV*RPQPFV
Trigger: GACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCTCACATTCACGCGGCTaGCACACAAGTGCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSSHSRG*HTSASE
Trigger: TTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGA...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGAAGAGGGCTGAGCTaGGGAAGGCCACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGRGLS*GRPPRW
Trigger: CCACCTGGGTGGCCTTCCGCAGCTCAGCCCTCTTCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGTCCCCAGCTTCCCTaGCTCCACCGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRPQLP*LHRSQL
Trigger: CAGCTGAGACCGGTGGAGGCAGGGAAGCTGGGGACG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCGTCCCCAGCTTCCCTaGCTCCACCGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRPQLP*LHRSQL
Trigger: CAGCTGAGACCGGTGGAGGCAGGGAAGCTGGGGACG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCCGGCTCGTACCGCTaGCCTCCGCTACGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGAGSYR*PPLRQS
Trigger: GCTCTGTCGTAGCGGAGGGCAGCGGTACGAGCCGGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGATCTCGTCCTGGGCCTaGCAGCTGAGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAISSWA*QLSQPF
Trigger: GAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGAT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEADRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCGGTCCTGGGGGTGCGTaGGGTACTCTGGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRGPGGA*GTLEGQ
Trigger: CTGCCCCTCCAGAGTACCCCACGCACCCCCAGGACC...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCCTGCCGGGCGTTCCTaGCTCCTGCTGCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGPAGRS*LLLQAP
Trigger: TGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGG...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCAGGCAGGTACGGCTGTaGGCATGCAGCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSRQVRL*ACSRGA
Trigger: TGCCCCTCGGCTGCATGCCCACAGCCGTACCTGCCT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGGTGCTGTGGGCCTGTaGCCTTGGACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAGAVGL*PWTSSW
Trigger: CCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCTTCCCGCCAGAGCCTaGAGGATGAGGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMLPARA*RMRGRR
Trigger: CCGTCTGCCCCTCATCCTCCAGGCTCTGGCGGGAAG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAAGTGAGGAGAGGGACTaGGGGCAGTGTTTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVSEERD*GQCFGS
Trigger: GCTGCCGAAACACTGCCCCCAGTCCCTCTCCTCACT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCGGCTGACCTCCCCATaGTCCAGCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRLTSP*SSATAS
Trigger: CGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGGCTGACCTCCCCATaGTCCAGCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRLTSP*SSATAS
Trigger: CGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
3UTR CAA 72 bp GGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTaGATCAGCTGTAGTCCCTTCCCCTTCACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRREARPLVPAP*ISCSPFPFTGH
Trigger: GTGCCCTGTGAAGGGGAAGGGACTACAGCTGATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGGAGTAAAAGCCCTCTaGCTTGAGCATGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIGVKAL*LEHDEQ
Trigger: CTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPRLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCAGCCTCTGCTGGGGGTaGTCATGGAGCCGCACGTGG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVSLCWG*SWSRTW
Trigger: CCACGTGCGGCTCCATGATCACCCCCAGCAGAGGCT...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGAGCCTCTGCTGGGGGTaGTCATGGAGCCGCACGTGG +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRSLCWG*SWSRTW
Trigger: CCACGTGCGGCTCCATGATCACCCCCAGCAGAGGCT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGCATGGAACGCAGCGTaGGGTGGGCAGGGGCAGATC +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVAWNAA*GGQGQI
Trigger: GATCTGCCCCTGCCCACCTCACGCTGCGTTCCATGC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEQLTSS*PGSAVP
Trigger: CGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTG...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWQLTSS*PGSAVP
Trigger: CGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAASWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEASLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNESLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQALIRD*SPVRLP
Trigger: CGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRALIRD*SPVRLP
Trigger: CGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVSLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCGAAGGTCCTGGGGGTaGGTGGGGTACTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGRRSWG*VGYSGG
Trigger: CCCTCCAGAGTACCCCACGCACCCCCAGGACCTTCG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRACVCTG*PGGGPQ
Trigger: TTGAGGACCGCCGCCAGGGCACCCCGTACATACACA...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAACAGGGCACTTGTCTTaGTGGTTGGGGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVTGHLS*WLGSPG
Trigger: CCCTGGTGACCCCAACCAGCAAGACAAGTGCCCTGT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCCAGGCAGCAGCAGCTaGAGACAGAGGCCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAPGSSS*RQRPRG
Trigger: CCCTCTAGGCCTCTGTCTGCAGCTGCTGCTGCCTGG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGGGATCCACCAGGGCCTaGAACCACGTCTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMGSTRA*NHVFGP
Trigger: GGGGCCAAAGACGTGGTTGCAGGCCCTGGTGGATCC...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAACAACCCCTCCCAGCTaGATATCGGCTCACATTCAC +
Preference number: 4 (lower is better)
Translates to: APACRAFLAPAAGTTETPTTPPS*ISAHIH
Trigger: GTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGT...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTTGGTCTTCCCTCCTTaGCTCCTCGGCCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEALVFPP*LLGLGW
Trigger: CCACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCACCTCCCGGGTTCATaGCATTCTCCTGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDHLPGS*HSPASA
Trigger: GGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCAGCTCCTGCTGTTaGCTTCGGCTGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGSSCC*LRLTSP
Trigger: TGGGGAGGTCAGCCGAAGGCAACAGCAGGAGCTGCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTATTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVFSISS*AWQLSQ
Trigger: CTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAA...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEATAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNERERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCAGGCAGGTACGGCTGTaGGCATGCAGCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRRQVRL*ACSRGA
Trigger: TGCCCCTCGGCTGCATGCCCACAGCCGTACCTGCCT...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCTGGCGGCTCCCGCCTaGTCAGTGGGGATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGLAAPA*SVGIRA
Trigger: AGCCCTTATCCCCACTGACCAGGCGGGAGCCGCCAG...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCACTGGCGGCTCCCGCCTaGTCAGTGGGGATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHALAAPA*SVGIRA
Trigger: AGCCCTTATCCCCACTGACCAGGCGGGAGCCGCCAG...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGTGGGCCTGTGGCCTTaGACAAGCTCCTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAVGLWP*TSSWPH
Trigger: GTGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCAC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGTGGGCCTGTGGCCTTaGACAAGCTCCTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRVGLWP*TSSWPH
Trigger: GTGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCAC...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACTTGTCTTGCTGGTTaGGGTCACCAGGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSTCLAG*GHQGLL
Trigger: GAGCAATCCCTGGTGACCCCAACCAGCAAGACAAGT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCCCCGGTGAGGGGTaGGACCTTGTGTATAGGTCC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGPGEG*DLVYRS
Trigger: GGACCTATACACAAGGTCCCACCCCTCACCGGGGCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCTCCTCGGCCTGGGGTaGTGGCGCCTCGGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSLLGLG*WRLGLR
Trigger: TCTCAGACCGAGGCGCCACCACCCCAGGCCGAGGAG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGATGAGCCACCTCGCTaGGACCAGACCTTACTTTCT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSDEPPR*DQTLLS
Trigger: AGAAAGTAAGGTCTGGTCCCAGCGAGGTGGCTCATC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPRQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGAGACTGCAGTCCCGTaGGGCTGCCGAACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCETAVP*GCRTGW
Trigger: CCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGTCTCTCCCCCTCTTCTaGGAAGGCTCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGSLPLF*EGSWLP
Trigger: TGGGAGCCAAGAGCCTTCTCAGAAGAGGGGGAGAGA...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCCGTCTTTGGCCCCGGTaGGGGGTGGGACCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRRLWPR*GVGPCV
Trigger: TACACAAGGTCCCACCCCTCACCGGGGCCAAAGACG...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACAGTCTTATGCACGTaGGCCCAATACTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSTVLCT*AQYWMS
Trigger: GGACATCCAGTATTGGGCTCACGTGCATAAGACTGT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGGAAGAGGGCTaGGCTGCGGAAGGCCACCCA +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRWQEEG*AAEGHP
Trigger: TGGGTGGCCTTCCGCAGCTCAGCCCTCTTCCTGCCA...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGATGGTCTTGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMMVLIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCAAGACCAT...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCCTGCTCAGAGCTGCTaGAAGTGGCTCTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPPAQSC*KWLSCC
Trigger: ACAACAGGAGAGCCACTTTCAGCAGCTCTGAGCAGG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCAGACCTTACTTTCTTaGCTTGGCCACAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPQTLLS*LGHKSV
Trigger: GACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTTGGTCTCGATCTCCTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRLVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAGGAGATCGAGACCAA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGTCCCGCAGCTGTATaGGGATGCGGTGTACAGGTG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGPAAV*GCGVQV
Trigger: CACCTGTACACCGCATCCTCATACAGCTGCGGGACC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAASRRSS*HLGHSP
Trigger: TGGGGAGTGACCCAGATGTCAGGATGACCTACGGGA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNESWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCTCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVALIRD*SPVRLP
Trigger: CGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGALIRD*SPVRLP
Trigger: CGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGSLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRCVCTG*PGGGPQ
Trigger: TTGAGGACCGCCGCCAGGGCACCCCGTACATACACA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCGGATCCACCAGGGCCTaGAACCACGTCTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRGSTRA*NHVFGP
Trigger: GGGGCCAAAGACGTGGTTGCAGGCCCTGGTGGATCC...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCAGGACGATGCTGGGTaGAAGAGGGGACGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVQDDAG*KRGRGW
Trigger: CCATCCCCGTCCCCTCTTGCACCCAGCATCGTCCTG...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCAGGACGATGCTGGGTaGAAGAGGGGACGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETQDDAG*KRGRGW
Trigger: CCATCCCCGTCCCCTCTTGCACCCAGCATCGTCCTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCTCAGTCTCAGAGCTaGCCGGAGGGGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGAQSQS*PEGVRM
Trigger: CATCCTCACCCCCTCCGGGCAGCTCTGAGACTGAGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAAGGACCAGCTTTGCTaGCAAGCAGGAAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAKDQLC*QAGSRS
Trigger: GCTCCGGCTTCCTGCTTGGCAGCAAAGCTGGTCCTT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGGGAAGGACCAGCTTTaGTGCCAAGCAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSGKDQL*CQAGSR
Trigger: CCGGCTTCCTGCTTGGCAGCAAAGCTGGTCCTTCCC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGGAAGGACCAGCTTTaGTGCCAAGCAGGAAGCCGG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGKDQL*CQAGSR
Trigger: CCGGCTTCCTGCTTGGCAGCAAAGCTGGTCCTTCCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCCACCAGCGGCGCCGATaGGCAGTGGCCAGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CRGGVGPNHQGNKRGPKVHQRRR*AVARVG
Trigger: GCCCACCCTGGCCACTGCCCATCGGCGCCGCTGGTG...GACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCATCTCGTCCTGGGCCTaGCAGCTGAGCCAGCCGTTC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETISSWA*QLSQPF
Trigger: GAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGAT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: VHVLRPREGLKGPVKEAVDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...AACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGACAGGCACAGCTTGTaGCCCTCCTGCAGCGCCACC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWDRHSL*PSCSAT
Trigger: GGTGGCGCTGCAGGAGGGCCACAAGCTGTGCCTGTC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KTSPEQPAQTTRTTMKETPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...TGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGGGAGCGTGAACGCTaGCACGGAGACGGCGAAGGT +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLRERER*HGDGEG
Trigger: ACCTTCGCCGTCTCCGTGCCAGCGTTCACGCTCCCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTGTGGCAGGCAGGGGATaGCAGCCCCCTCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSVAGRG*QPPLLW
Trigger: CCAAAGCAGAGGGGGCTGCCATCCCCTGCCTGCCAC...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCTGGCGGCTCCCGCCTaGTCAGTGGGGATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCLAAPA*SVGIRA
Trigger: AGCCCTTATCCCCACTGACCAGGCGGGAGCCGCCAG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGGTGCTGTGGGCCTGTaGCCTTGGACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGGAVGL*PWTSSW
Trigger: CCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRALKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGCTGGAGCTGGTCGGTaGCAGAGAATCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDAGAGR*QRILSC
Trigger: GCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGAGACGAAGAGCAGCTaGGCACGGCTGGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGETKSS*ARLELV
Trigger: GACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCCAAGCTGTTAATGTaGAGCTTGAATGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPKLLM*SLNVAW
Trigger: CCAGGCCACATTCAAGCTCCACATTAACAGCTTGGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGCAGGCTGGAGTGCAATaGTGCGATCTCGACTCACGG +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAQAGVQ*CDLDSR
Trigger: CCGTGAGTCGAGATCGCACCATTGCACTCCAGCCTG...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGGCCCCGGTGAGGGGTaGGACCTTGTGTATAGGTCC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAGPGEG*DLVYRS
Trigger: GGACCTATACACAAGGTCCCACCCCTCACCGGGGCC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCTTCTCAGAGCTCCTaGCAGGAGCCCCTCACCGCA +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGASQSS*QEPLTA
Trigger: TGCGGTGAGGGGCTCCTGCCAGGAGCTCTGAGAAGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCTCCTCACCCAGGGATTaGGGTGAGTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSSSPRD*GESGHG
Trigger: CCCATGCCCTGACTCACCCCAATCCCTGGGTGAGGA...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCAGCTGCCTTCTTCCTaGGCACTGAAAACGATGCTA +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSQLPSS*ALKTML
Trigger: TAGCATCGTTTTCAGTGCCCAGGAAGAAGGCAGCTG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGTATGGGCTTGGGTGTaGTGTGGTGGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDVWAWV*CGGPFP
Trigger: AGGGAAAGGGCCACCACACCACACCCAAGCCCATAC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCACGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPEQPAQTTRTTMKETPARHSIG*ACICLW
Trigger: CCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCG...TGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp TCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGCGGCTGACCTCCCCATaGTCCAGCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: SMSSGPGKGSRGQLKKQLRLTSP*SSATAS
Trigger: CGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCG...CAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGTCGCCGAACATGTTaGGCAGCTCCTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGRRTC*AAPAVA
Trigger: GGCAACAGCAGGAGCTGCCCAACATGTTCGGCGACC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGTCGCCGAACATGTTaGGCAGCTCCTGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGRRTC*AAPAVA
Trigger: GGCAACAGCAGGAGCTGCCCAACATGTTCGGCGACC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGAGGACTGACATCGCCTaGGGCCAGCATGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNERTDIA*GQHGTQ
Trigger: CTGCGTTCCATGCTGGCCCCAGGCGATGTCAGTCCT...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACCG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAGARRR*RCRGQP
Trigger: CGGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
CDS-3UTR TCA 90 bp AGGAGGGGGCCACTGCGGCATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGGGAGTAAAAGCCCTCTaGCTTGAGCATGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: RRGPLRHPAGTSPPGRRWGVKAL*LEHDEQ
Trigger: CTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCC...CCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGTGGCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR TCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGAAAGGAGCCCACAGTaGAGGCCAAATTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQERSPQ*RPNLAS
Trigger: AGATGCTAAATTTGGCCTTCACTGTGGGCTCCTTTC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCGAAAGGAGCCCACAGTaGAGGCCAAATTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSERSPQ*RPNLAS
Trigger: AGATGCTAAATTTGGCCTTCACTGTGGGCTCCTTTC...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEENQPGAAGPDHEDDDEGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...TTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRARQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCCCCGGGAGGGAGCGTaGACGCTGGCACGGAGACGG +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSPREGA*TLARRR
Trigger: CCGTCTCCGTGCCAGCGTTCACGCTCCCTCCCGGGG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGATGGTCTCGAACTCCTaGCCTCAGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMMVSNS*PQVSLL
Trigger: CAGGAGGCTCACCTGAGGTCAGGAGTTCGAGACCAT...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTAAGGGGAGCTGCTGCTaGAGGAGCCCGACGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSKGSCC*RSPTAD
Trigger: ATCAGCCGTCGGGCTCCTTCAGCAGCAGCTCCCCTT...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTACGTGACCGTGCCTTaGGTCGCCCCACTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGYVTVP*VAPLSR
Trigger: TCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTA...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCCGGAGCTGTTTCCTaGCTCACCACCACACTCACA +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRAGAVS*LTTTLT
Trigger: TGTGAGTGTGGTGGTGAGTCAGGAAACAGCTCCGGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCCGGAGCTGTTTCCTaGCTCACCACCACACTCACA +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAAGAVS*LTTTLT
Trigger: TGTGAGTGTGGTGGTGAGTCAGGAAACAGCTCCGGC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRSRRSS*HLGHSP
Trigger: TGGGGAGTGACCCAGATGTCAGGATGACCTACGGGA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR TCA 90 bp GATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCATCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: DLHRVVHVLRPREGLKGPSRRSS*HLGHSP
Trigger: TGGGGAGTGACCCAGATGTCAGGATGACCTACGGGA...TGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR TCA 90 bp GGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGCTGTTGCCTTCGGCTaGCCTCCCCATGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GLKGPVKEAVEENQPGAAAVAFG*PPHGPA
Trigger: CGCTGGACCATGGGGAGGTCAGCCGAAGGCAACAGC...GGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp TTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: LRKTSPEQPAQTTRTTMKSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...CTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGTCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGTCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAESLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRALIRD*SPVRLP
Trigger: CGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGC...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRSLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCTGGCGGGAGAGCGCCTaGCTGCCGGGCGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSWRESA*LPGVPG
Trigger: GCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCA...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGCGCGGGCGAGACAGTaGAAGCCTTTGTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWARARQ*KPLSSG
Trigger: GCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGCVCTG*PGGGPQ
Trigger: TTGAGGACCGCCGCCAGGGCACCCCGTACATACACA...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETCVCTG*PGGGPQ
Trigger: TTGAGGACCGCCGCCAGGGCACCCCGTACATACACA...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGCTGGACCTCCACGTCTaGCGGCCACAGCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAELDLHV*RPQPFV
Trigger: GACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAG...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCTGGACCTCCACGTCTaGCGGCCACAGCCTTTCGTC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCLDLHV*RPQPFV
Trigger: GACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCCCGCCGGCAGGGGGTaGTGTGGGCCTGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSPAGRG*CGPVAL
Trigger: CAAGGCCACAGGCCCACAGCACCCCCTGCCGGCGGG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGGGGTCACCAGGGATTaGTCCCCCAAGTACCCATCA +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEGVTRD*SPKYPS
Trigger: TGATGGGTACTTGGGGGAGCAATCCCTGGTGACCCC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCTCAGTCTCAGAGCTaGCCGGAGGGGGTGAGGATG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEAQSQS*PEGVRM
Trigger: CATCCTCACCCCCTCCGGGCAGCTCTGAGACTGAGC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGATGCGGTGTACAGGTaGTGCCTACGTGACCGTGCC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETDAVYR*CLRDRA
Trigger: GGCACGGTCACGTAGGCAGCACCTGTACACCGCATC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTCTTGGGGCCGCTCCTaGCCAGGTGTTCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRSWGRS*PGVLSS
Trigger: GCTGGAAAGAACACCTGGGCAGGAGCGGCCCCAAGA...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp TCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCGTCCCCAGCTTCCCTaGCTCCACCGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRGQLKKQLRKTSPEQPARPQLP*LHRSQL
Trigger: CAGCTGAGACCGGTGGAGGCAGGGAAGCTGGGGACG...GGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAASIGWA*ICLWTP
Trigger: GGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGATGTTGGGCAGCTCCTaGTGTTGCCTTCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQMLGSS*CCLRLT
Trigger: GGTCAGCCGAAGGCAACAGCAGGAGCTGCCCAACAT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCAGCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: PAELDLHRVVHVLRPREGGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...CCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CCAGCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PAELDLHRVVHVLRPREGAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...CCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SMSSGPGKGSRGQLKKQLAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...CAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCCTCCAGGTCGACGGTaGACAGGCACAGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWPPGRR*TGTACG
Trigger: GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KEAVEENQPGAAGPDHEDTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...GTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAETAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGAGGCCAACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEARPTVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTTGGCCT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGAGGCCAACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRPTVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTTGGCCT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGARRR*RCRGQL
Trigger: CAGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGARRR*RCRGQL
Trigger: CAGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000634102.1
CDS-3UTR CCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRASSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QARARQCKPLSSGRYGCGSSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCA +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCVRLPN*VEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCAC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGAGAGGACCCATCATaGCCAGAAACAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGEDPS*PETAAA
Trigger: AGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGGAGAGGACCCATCATaGCCAGAAACAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEGEDPS*PETAAA
Trigger: AGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAERRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCGCCCAGCTGCAGGCCTaGCGGCTCCCGCCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSAQLQA*RLPPGQ
Trigger: CTGACCAGGCGGGAGCCGCCAGGCCTGCAGCTGGGC...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCAGGTGGGCGGGTTGGTaGGCCAGGCGGACGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSRWAGW*ARRTGL
Trigger: GAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCT...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGGCACGGCTGGAGCTaGTCGGTGGCAGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGGHGWS*SVAENL
Trigger: AAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGGGCACGGCTGGAGCTaGTCGGTGGCAGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGGHGWS*SVAENL
Trigger: AAGATTCTCTGCCACCGACCAGCTCCAGCCGTGCCC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCAGGCTGGAGTGCAATaGTGCGATCTCGACTCACGG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQQAGVQ*CDLDSR
Trigger: CCGTGAGTCGAGATCGCACCATTGCACTCCAGCCTG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGGAGCTCATGAGCGTTaGCAAAGTGCTGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVGAHER*QSAVSA
Trigger: AGCACTGACAGCACTTTGCCAACGCTCATGAGCTCC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGAGTGAGGAGAGGGACTaGGGGCAGTGTTTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGSEERD*GQCFGS
Trigger: GCTGCCGAAACACTGCCCCCAGTCCCTCTCCTCACT...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGCTTCTCAGAGCTCCTaGCAGGAGCCCCTCACCGCA +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWASQSS*QEPLTA
Trigger: TGCGGTGAGGGGCTCCTGCCAGGAGCTCTGAGAAGC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGAAGGGTCGAGGTCTaGGTGCTGCTAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLRRVEV*VLLVAL
Trigger: CAGGGCCACTAGCAGCACCCAGACCTCGACCCTTCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCTTGCCTCCTCGGCCTaGGGTGGTGGCGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPLASSA*GGGASV
Trigger: GACCGAGGCGCCACCACCCCAGGCCGAGGAGGCAAG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGTATGGGCTTGGGTGTaGTGTGGTGGCCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQVWAWV*CGGPFP
Trigger: AGGGAAAGGGCCACCACACCACACCCAAGCCCATAC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCGGTCATCCTGACATCTaGGTCACTCCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAGHPDI*VTPHIP
Trigger: GGGAATGTGGGGAGTGACCCAGATGTCAGGATGACC...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRHSIG*ACICLW
Trigger: CCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSRHSIG*ACICLW
Trigger: CCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGCCATCACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQAITVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTGATGGC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
3UTR CAA 72 bp AGACGGGCTGGCACCCTTGAGTTAGGCCCCCAGTCGTaGGCACAGATAAGGGGAGCTGCTGCTGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RRAGTLELGPQS*AQIRGAAAEGA
Trigger: GGCTCCTTCAGCAGCAGCTCCCCTTATCTGTGCCAACGACTGGGGGCCTAACTCAAGGGTGCCAGCCCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 72 bp CACCAAGACAGTCCTCTAGACTTTGGTCTTCCCTCCTaGCCTCCTCGGCCTGGGGTGGTGGCGCCTCGGTCT +
Preference number: 4 (lower is better)
Translates to: HQDSPLDFGLPS*PPRPGVVAPRS
Trigger: AGACCGAGGCGCCACCACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAAAGTCTAGAGGACTGTCTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAGGAGTAAAAGCCCTCTaGCTTGAGCATGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVGVKAL*LEHDEQ
Trigger: CTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCC...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCACCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: PEQPAQTTRTTMKETPASPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...TGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAARLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCATCCTGAACTGCTCTaGGCCTGCAGAAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEHPELL*ACRRTQ
Trigger: CTGGGTTCTTCTGCAGGCTCAGAGCAGTTCAGGATG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATGTAAGGAAACAGGCTTaGCTTTTAACTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHVRKQA*LLTQPF
Trigger: GAAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTAC...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGATGGTCTTGATCTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWMVLIS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGATCAAGACCAT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCTTGTCCACCAGTGATTaGTTATCTCGAGCAGCTATT +
Preference number: 4 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPLSTSD*LSRAAI
Trigger: AATAGCTGCTCGAGATAATCAATCACTGGTGGACAA...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATAACATGTACACACCCTaGCATGCCCGGATGCATCTC +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDNMYTP*HARMHL
Trigger: GAGATGCATCCGGGCATGTCAGGGTGTGTACATGTT...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCACTCCGAGGTAAACTaGGGCATGGAGGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEHSEVN*GMEARR
Trigger: CCTTCTTGCCTCCATGCCTCAGTTTACCTCGGAGTG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR TCA 90 bp TGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCTACCCAGGGGCAGGGTaGTGGCACTCCTCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: CRGGVGPNHQGNKRGPKVYPGAG*WHSSCP
Trigger: GGGGCACGAGGAGTGCCATCACCCTGCCCCTGGGTA...GACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGTACCCAGGGGCAGGGTaGTGGCACTCCTCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKYPGAG*WHSSCP
Trigger: GGGGCACGAGGAGTGCCATCACCCTGCCCCTGGGTA...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp GGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATATCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GAAGPDHEDDDEGDTSIISCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...TATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTTCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETSLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGGGGTCACCAGGGATTaGTCCCCCAAGTACCCATCA +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAGVTRD*SPKYPS
Trigger: TGATGGGTACTTGGGGGAGCAATCCCTGGTGACCCC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCACAGGGCACTTGTCTTaGTGGTTGGGGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRTGHLS*WLGSPG
Trigger: CCCTGGTGACCCCAACCAGCAAGACAAGTGCCCTGT...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAAGTTTCTTAAGGCTTTaGTCGGAGAGGGCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVSFLRL*SERASE
Trigger: CTCCGAAGCCCTCTCCGAGCAAAGCCTTAAGAAACT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRGWACI*LWTPVG
Trigger: ACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAGWACI*LWTPVG
Trigger: ACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCATGTTGGGCAGCTCCTaGTGTTGCCTTCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETMLGSS*CCLRLT
Trigger: GGTCAGCCGAAGGCAACAGCAGGAGCTGCCCAACAT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGTTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLFSISS*AWQLSQ
Trigger: CTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAA...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCTTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVFSISS*AWQLSQ
Trigger: CTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAA...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGGCGCCGGCCCACCGTaGTCACCTGCTTGTAGAACT +
Preference number: 4 (lower is better)
Translates to: VKEAVEENQPGAAGPDHEGAGPP*SPACRT
Trigger: AGTTCTACAAGCAGGTGACCACGGTGGGCCGGCGCC...CTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCAGGCCAACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVRPTVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTTGGCCT...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQSSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEASSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGAGAGGACCCATCATaGCCAGAAACAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGGEDPS*PETAAA
Trigger: AGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGGAGAGGACCCATCATaGCCAGAAACAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETGEDPS*PETAAA
Trigger: AGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGGAGAGGACCCATCATaGCCAGAAACAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVGEDPS*PETAAA
Trigger: AGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCHRGSP*RGPIMA
Trigger: GGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGATGTACGGGGTGCCCTaGCGGCGGTCCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRMYGVP*RRSSNS
Trigger: GGAATTTGAGGACCGCCGCCAGGGCACCCCGTACAT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCGGCCCCACGCCAGGATaGCTCCTGGGCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSGPTPG*LLGTGP
Trigger: TGGGCCAGTGCCCAGGAGCCATCCTGGCGTGGGGCC...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLLKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVLKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGGCACTTGTCTTGCTaGTTGGGGTCACCAGGGATT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGHLSC*LGSPGI
Trigger: AATCCCTGGTGACCCCAACCAGCAAGACAAGTGCCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCGCCATTTTCAGCCCTaGGGCCTATGGCAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMRHFQP*GLWQSD
Trigger: GTCACTTTGCCATAGGCCCCAGGGCTGAAAATGGCG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGTCGGAAACTCCACTTaGCTGAACGTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPVGNST*LNVIVL
Trigger: CAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGAC...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCGACGGCTGATTCTGTaGAGGCTTCTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNERRLIL*RLLRAP
Trigger: AGGAGCTCTGAGAAGCCTCCACAGAATCAGCCGTCG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTCCCACAGTCTGTATTaGCGGAAGACGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRSHSLY*RKTGWH
Trigger: GTGCCAGCCCGTCTTCCGCCAATACAGACTGTGGGA...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTTCCTCACCCAGGGATTaGGGTGAGTCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCSSPRD*GESGHG
Trigger: CCCATGCCCTGACTCACCCCAATCCCTGGGTGAGGA...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGAGAAGGGTCGAGGTCTaGGTGCTGCTAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRRRVEV*VLLVAL
Trigger: CAGGGCCACTAGCAGCACCCAGACCTCGACCCTTCT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTTTGGGTGTGGTGTGGTaGCCCTTTCCCTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCLGVVW*PFPCPS
Trigger: GCTGGGACAGGGAAAGGGCCACCACACCACACCCAA...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGTCATCCTGACATCTaGGTCACTCCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAGHPDI*VTPHIP
Trigger: GGGAATGTGGGGAGTGACCCAGATGTCAGGATGACC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp AGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCAGCTTGCATTTGCCTGTaGACTCCCGTAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: SPEQPAQTTRTTMKETPAACICL*TPVGHP
Trigger: AGGATGACCTACGGGAGTCCACAGGCAAATGCAAGC...TGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGCCATCACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVAITVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTGATGGC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACCG +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWGARRR*RCRGQP
Trigger: CGGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
CDS-3UTR TCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp AAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KTSPEQPAQTTRTTMKETPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...TGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR TCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAARTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp AGGATGGGGCTGAACACGCTGTGCATGAAGGAGGGGGCCACTGCGGCATCCGGCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RMGLNTLCMKEGATAASGRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GCCGGATGCCGCAGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR TCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSRLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETRQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGGCGAAGAGCGCGCTaGTCAGAGACTGCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPGRRAR*SETAVP
Trigger: CGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCATCCTGAACTGCTCTaGGCCTGCAGAAGAACCCAG +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVHPELL*ACRRTQ
Trigger: CTGGGTTCTTCTGCAGGCTCAGAGCAGTTCAGGATG...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTATGGTCTCGAACTCCTaGCCTCAGGTGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCMVSNS*PQVSLL
Trigger: CAGGAGGCTCACCTGAGGTCAGGAGTTCGAGACCAT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGTAAGGAAACAGGCTTaGCTTTTAACTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TRVSGALSRPSTTELRGRVRKQA*LLTQPF
Trigger: GAAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTAC...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTTCTCTCCCCCTCTTCTaGGAAGGCTCTTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSSLPLF*EGSWLP
Trigger: TGGGAGCCAAGAGCCTTCTCAGAAGAGGGGGAGAGA...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGGTCAGCCGCTGGGTTaGCCCTGGTTAATACAGGGT +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCGQPLG*PWLIQG
Trigger: ACCCTGTATTAACCAGGGTCAACCCAGCGGCTGACC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp GGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCTCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQLKKQLRKTSPEQPAQTSRRSS*HLGHSP
Trigger: TGGGGAGTGACCCAGATGTCAGGATGACCTACGGGA...GGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR TCA 90 bp TGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCGCTGTTGCCTTCGGCTaGCCTCCCCATGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: CRGGVGPNHQGNKRGPKVAVAFG*PPHGPA
Trigger: CGCTGGACCATGGGGAGGTCAGCCGAAGGCAACAGC...GACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp AGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCACTCCGGCTCCGGCTCTaGACCACCCGGCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSPNMLGSVNEVKVIHIPLRLRL*TTRLLR
Trigger: CCGGAGGAGCCGGGTGGTGCAGAGCCGGAGCCGGAG...TGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTLVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTCCTCCTGCCTCTGCTaGAGCTGCCGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPSSCLC*SCRSSW
Trigger: CCAGCTGGAGCGGCAGCTGCAGCAGAGGCAGGAGGA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAESLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTTCAAGCGATTCTCCTaGCTCAGGCTCCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRFKRFS*LRLPSS
Trigger: ACTACTCGGGAGCCTGAGGCAGGAGAATCGCTTGAA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGTTCAAGCGATTCTCCTaGCTCAGGCTCCCGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEFKRFS*LRLPSS
Trigger: ACTACTCGGGAGCCTGAGGCAGGAGAATCGCTTGAA...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCTGAGGTGGGAGAATTaGTTCAGCCCAGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMLRWEN*FSPGVP
Trigger: TGGAACTCCTGGGCTGAAGCAATTCTCCCACCTCAG...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETSIGWA*ICLWTP
Trigger: GGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR GCA 90 bp TTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: LRKTSPEQPAQTTRTTMKSIGWA*ICLWTP
Trigger: GGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCT...CTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCTCCGGCTCCGGCTCTaGACCACCTGGGACACCCCG +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTLRLRL*TTWDTP
Trigger: CGGGGTGTCCCAGGTGGTGCAGAGCCGGAGCCGGAG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS-3UTR GCA 90 bp CATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAACCACAGCTCTCCTaGTGTTGCCTTCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: HVLRPREGLKGPVKEAVEEPQLS*CCLRLT
Trigger: GGTCAGCCGAAGGCAACAGCAGGAGAGCTGTGGTTC...CTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTTTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSFSISS*AWQLSQ
Trigger: CTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAA...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRFSISS*AWQLSQ
Trigger: CTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAA...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEGARRR*RCRGQL
Trigger: CAGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATT +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCPPTAE*MNPRTI
Trigger: AATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCTGCTGTCTGGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCAAGACGGCGAAGGTCCTaGGGGTGCGTGGGGTACTCT +
Preference number: 4 (lower is better)
Translates to: AAVWDSLMHVSPILDVPPRRRRS*GCVGYS
Trigger: AGAGTACCCCACGCACCCCCAGGACCTTCGCCGTCT...TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTGGCGGCTCCCGCCTaGTCAGTGGGGATAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVLAAPA*SVGIRA
Trigger: AGCCCTTATCCCCACTGACCAGGCGGGAGCCGCCAG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTATGGCTCCTGGGCACTaGCCCAGCTGCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAMAPGH*PSCRPG
Trigger: GCCAGGCCTGCAGCTGGGCCAGTGCCCAGGAGCCAT...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCTCAAGACACACTTCTaGGGGCAGTCAAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRLKTHF*GQSRWA
Trigger: CGCCCACCTTGACTGCCCCCAGAAGTGTGTCTTGAG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTAGGAAGGTCTTTTCCTaGCCCACTGTCCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCRKVFS*PTVPPE
Trigger: CTCGGGAGGGACAGTGGGCCAGGAAAAGACCTTCCT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGAGCTCATGAGCGTTaGCAAAGTGCTGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGAHER*QSAVSA
Trigger: AGCACTGACAGCACTTTGCCAACGCTCATGAGCTCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATGATTGTGCTGCTGTCTaGGACAGTCTTATGCACGTG +
Preference number: 4 (lower is better)
Translates to: LEDEGQTGGPATGACSFDDCAAV*DSLMHV
Trigger: CACGTGCATAAGACTGTCCCAGACAGCAGCACAATC...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCCGACGGCTGATTCTGTaGAGGCTTCTCAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRRRLIL*RLLRAP
Trigger: AGGAGCTCTGAGAAGCCTCCACAGAATCAGCCGTCG...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGCCATCACTGTCTTCTaGTCGCCGCTGACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCAITVF*SPLTRN
Trigger: GTTCCTGGTCAGCGGCGACCAGAAGACAGTGATGGC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
CDS-3UTR CCA 90 bp AAAGCCCAGCCAGCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCCGCGAAGCAGGCGCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: KAQPAELDLHRVVHVLRPPRSRR*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGCGCCTGCTTCGCGG...GGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGCTGGCTGGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
3UTR CAA 72 bp GATGCGGTGTACAGGTGCTGCCTACGTGACCGTGCCTaGAGTCGCCCCACTCAGCAGAAACCTCACTCAGCA +
Preference number: 4 (lower is better)
Translates to: DAVYRCCLRDRA*SRPTQQKPHSA
Trigger: TGCTGAGTGAGGTTTCTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAGGCAGCACCTGTACACCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GATTCCTGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: DSWKGDCRGGVGPNHQGNRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...ATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp CATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: HVLRPREGLKGPVKEAVEPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572801.5
ENST00000576721.5
ENST00000633255.1
ENST00000633994.1
CDS-3UTR TCA 90 bp CATCCGGCTGGCACTTCACCTCCAGGTCGACGGTGGACAGGCACAGCTTGTGGCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HPAGTSPPGRRWTGTACGRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GCCACAAGCTGTGCCTGTCCACCGTCGACCTGGAGGTGAAGTGCCAGCCGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR TCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGRLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAERQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCGACAGCGGAGTGGATaGATCCTCGCACGATTGTGT +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSRQRSG*ILARLC
Trigger: ACACAATCGTGCGAGGATTCATCCACTCCGCTGTCG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTTTAAACGGAAGTTCTaGCCAGGACGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMFKRKF*PGRCWV
Trigger: CACCCAGCATCGTCCTGGTCAGAACTTCCGTTTAAA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCACAGTCTTATGCACGTaGGCCCAATACTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSTVLCT*AQYWMS
Trigger: GGACATCCAGTATTGGGCTCACGTGCATAAGACTGT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCCACAAAAGAAAAGTaGACGAGAGAAGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: QTLAGERLPAGRSWLLLQATKEK*TREEFL
Trigger: AAGAAACTCTTCTCTCGTTCACTTTTCTTTTGTGGC...CTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp TGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: WKGDCRGGVGPNHQGNKRAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...ACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp GGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: GLKGPVKEAVEENQPGAAKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...GGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCTCGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AELDLHRVVHVLRPREGLGWACI*LWTPVG
Trigger: ACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCC...GAGCCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp TCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCGAACCACAGCTCTCCTaGTGTTGCCTTCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: SRGQLKKQLRKTSPEQPAEPQLS*CCLRLT
Trigger: GGTCAGCCGAAGGCAACAGCAGGAGAGCTGTGGTTC...GGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCSSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGGCATTAGTGATCTTCTaGATCTGCCGGTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLALVIF*ICRSRF
Trigger: GAAGCGGGACCGGCAGATCCAGAAGATCACTAATGC...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCGGCTGCCGAACTGGGTaGAGGGGTACACGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSGCRTG*RGTRQR
Trigger: ACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCC...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCCCAAGCTGTTAATGTaGAGCTTGAATGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSPKLLM*SLNVAW
Trigger: CCAGGCCACATTCAAGCTCCACATTAACAGCTTGGG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCGCCATTTTCAGCCCTaGGGCCTATGGCAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWRHFQP*GLWQSD
Trigger: GTCACTTTGCCATAGGCCCCAGGGCTGAAAATGGCG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTGGCTCTCCTGTTGTATaGGCTTGGGTGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSGSPVV*AWVWCG
Trigger: ACCACACCACACCCAAGCCCATACAACAGGAGAGCC...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTATCTCGAGCAGCTATTTaGCCAAGTCTTACCAAAACG +
Preference number: 4 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVSRAAI*PSLTKT
Trigger: CGTTTTGGTAAGACTTGGCCAAATAGCTGCTCGAGA...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCTTGCATTTGCCTGTaGACTCCCGTAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETACICL*TPVGHP
Trigger: AGGATGACCTACGGGAGTCCACAGGCAAATGCAAGC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CCA 90 bp GATTCCTGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATCGGCTGACCTCCCCATaGTCCAGCGCCACAGCATCG +
Preference number: 4 (lower is better)
Translates to: DSWKGDCRGGVGPNHQGNRLTSP*SSATAS
Trigger: CGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCG...ATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR TCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGAGTAAAAGCCCTCTaGCTTGAGCATGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGGVKAL*LEHDEQ
Trigger: CTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCC...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGAAAGGAGCCCACAGTaGAGGCCAAATTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAERSPQ*RPNLAS
Trigger: AGATGCTAAATTTGGCCTTCACTGTGGGCTCCTTTC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTCGCTGCCCAGCAGCCTaGGCTTCCTCGGGCCATACT +
Preference number: 4 (lower is better)
Translates to: WKGDCRGGVGPNHQGNKRRCPAA*ASSGHT
Trigger: AGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCG...ACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp AAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCACCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: KGPVKEAVEENQPGAAGPPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...TGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572801.5
ENST00000576721.5
ENST00000633255.1
ENST00000633994.1
CDS-3UTR TCA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGT +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSRSPAG*EGAAPR
Trigger: ACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCT...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGTTTAAACGGAAGTTCTaGCCAGGACGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLFKRKF*PGRCWV
Trigger: CACCCAGCATCGTCCTGGTCAGAACTTCCGTTTAAA...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCTTCTTCCTGGGCACTaGAAACGATGCTACCATTGT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQLLPGH*KRCYHC
Trigger: ACAATGGTAGCATCGTTTTCAGTGCCCAGGAAGAAG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: FGKRQNPDTGGRAPACRASVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCATTCAGAGCCAGGGCGATGAAGATGAGCACGGAGAGAGCGTTTGGTTTACTTCACTCCTCATGGAGCTaGCCACACTCAGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PFRARAMKMSTERAFGLLHSSWS*PHSGAG
Trigger: GCCGGCGCCTGAGTGTGGGCAGCTCCATGAGGAGTG...AAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATCGCCCTGGCTCTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCCTCGCACGATTGTGTaGAGGATGAAGGAGAGGATC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCPRTIV*RMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGTTCCTGGCTCCTGCTaGAGGCACCACAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAVPGSC*RHHRDP
Trigger: GGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAAC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGGCGTTCCTGGCTCCTaGTGCAGGCACCACAGAGAC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAGVPGS*CRHHRD
Trigger: GTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGGCCCACATCCTGAACTaGTCTGAGCCTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWAHILN*SEPAEE
Trigger: TTCTTCTGCAGGCTCAGAGCAGTTCAGGATGTGGGC...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCTGAGGTGGGAGAATTaGTTCAGCCCAGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSLRWEN*FSPGVP
Trigger: TGGAACTCCTGGGCTGAAGCAATTCTCCCACCTCAG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTACAACCCCTCCCAGCTaGATATCGGCTCACATTCAC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCTTPPS*ISAHIH
Trigger: GTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTACACACCCTGACATaGCCGGATGCATCTCACACT +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCVHTLT*PDASHT
Trigger: AGTGTGAGATGCATCCGGGCATGTCAGGGTGTGTAC...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR GCA 90 bp AAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: KGPVKEAVEENQPGAAGPGWACI*LWTPVG
Trigger: ACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCC...TGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGCAGCTCTCCTGCTGTTaGCTTCGGCTGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKQLSCC*LRLTSP
Trigger: TGGGGAGGTCAGCCGAAGGCAACAGCAGGAGAGCTG...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp CCAGCTGAACTTGATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: PAELDLHRVVHVLRPREGHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...CCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATCAAGTTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp TCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SMSSGPGKGSRGQLKKQLFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...CAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCACAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCCTTGGACAAGCTCCTaGCCCCACGCCAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSPWTSS*PHARMA
Trigger: AGCCATCCTGGCGTGGGGCCAGGAGCTTGTCCAAGG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCGGCAGGGGGTGCTGTaGGCCTGTGGCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTRQGVL*ACGLGQ
Trigger: TTGTCCAAGGCCACAGGCCCACAGCACCCCCTGCCG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGATCGGTAGAGGAGGGTaGCTCACACTTCTAAGATGT +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAIGRGG*LTLLRC
Trigger: ACATCTTAGAAGTGTGAGCCACCCTCCTCTACCGAT...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCAGGATTCGCCTGTTTaGCTGGGAAAATCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETQDSPV*LGKSVE
Trigger: CTCTACCGATTTTCCCAGCCAAACAGGCGAATCCTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCAGGATTCGCCTGTTTaGCTGGGAAAATCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGQDSPV*LGKSVE
Trigger: CTCTACCGATTTTCCCAGCCAAACAGGCGAATCCTG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTAGCTTGAATGTGGCCTaGACCTGCCCTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCSLNVA*TCPFLF
Trigger: GAAGAGGAAAGGGCAGGTCCAGGCCACATTCAAGCT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCGATTGTGCTGCTGTCTaGGACAGTCTTATGCACGTG +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRDCAAV*DSLMHV
Trigger: CACGTGCATAAGACTGTCCCAGACAGCAGCACAATC...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGTCGGAAACTCCACTTaGCTGAACGTGATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAVGNST*LNVIVL
Trigger: CAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGAC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTGATGAGCCACCTCGCTaGGACCAGACCTTACTTTCT +
Preference number: 4 (lower is better)
Translates to: KATQVECAAPPSVAFRSSDEPPR*DQTLLS
Trigger: AGAAAGTAAGGTCTGGTCCCAGCGAGGTGGCTCATC...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 72 bp AACAGAAAGGATCCACCAGGGCCTGCAACCACGTCTTaGGCCCCGGTGAGGGGTGGGACCTTGTGTATAGGT +
Preference number: 4 (lower is better)
Translates to: NRKDPPGPATTS*APVRGGTLCIG
Trigger: ACCTATACACAAGGTCCCACCCCTCACCGGGGCCAAAGACGTGGTTGCAGGCCCTGGTGGATCCTTTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 72 bp CACGCGGCTGCCACACAAGTGCGTCGGAAACTCCACTaGGCTGAACGTGATTGTGCTGCTGTCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: HAAATQVRRKLH*AERDCAAVWDS
Trigger: ACTGTCCCAGACAGCAGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 72 bp CTGTCCTGCTCAGAGCTGCTGAAAGTGGCTCTCCTGTaGTATGGGCTTGGGTGTGGTGTGGTGGCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSCSELLKVALL*YGLGCGVVALS
Trigger: GGAAAGGGCCACCACACCACACCCAAGCCCATACAACAGGAGAGCCACTTTCAGCAGCTCTGAGCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGAAAGGAGCCCACAGTaGAGGCCAAATTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAERSPQ*RPNLAS
Trigger: AGATGCTAAATTTGGCCTTCACTGTGGGCTCCTTTC...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGAAAGGAGCCCACAGTaGAGGCCAAATTTAGCATCT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETERSPQ*RPNLAS
Trigger: AGATGCTAAATTTGGCCTTCACTGTGGGCTCCTTTC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: VEENQPGAAGPDHEDDDEAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...TTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR TCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCCATGCAGCTATTAACTaGTATGCCAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRHAAIN*YARRGI
Trigger: GATGCCCCTTCTGGCATATCAGTTAATAGCTGCATG...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCTTCTTCCTGGGCACTaGAAACGATGCTACCATTGT +
Preference number: 4 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETLLPGH*KRCYHC
Trigger: ACAATGGTAGCATCGTTTTCAGTGCCCAGGAAGAAG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTTTGGTCTCGATCTCCTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPALVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAGGAGATCGAGACCAA...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCACCAAAGCCACTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: NMLGSVNEVKVIHIPPKPLVPRL*CAAHCA
Trigger: GGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAG...TGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp TGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTAGCTTGTGGCCCTCCTaGAGCGCCACCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WKGDCRGGVGPNHQGNKRSLWPS*SATCSL
Trigger: CAAGGAGCAGGTGGCGCTGCAGGAGGGCCACAAGCT...ACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCAGAGAATCTTGTCCTaGCTTTTCTTCTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAQRILS*LFFSSS
Trigger: TGAGCTTGAGAAGAAAAGGCAGGACAAGATTCTCTG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCC +
Preference number: 4 (lower is better)
Translates to: GKGSRGQLKKQLRKTSPESIGWA*ICLWTP
Trigger: GGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCT...CTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp GGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCTTCCCTGTGATCTTGTaGTCAAAGCCCAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLKGPVKEAVEENQPGAAFPVIL*SKPSQL
Trigger: CAGCTGGCTGGGCTTTGACCACAAGATCACAGGGAA...GGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGCGCCACCTGCTCCTTaGCACTCCTCATGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTAPPAP*HSSWSC
Trigger: GCAGCTCCATGAGGAGTGCCAAGGAGCAGGTGGCGC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGAGCACGCCGAAGATaGAGGTGTAGAGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPGARRR*RCRGQL
Trigger: CAGTTGGCCTCTACACCTCCATCTTCGGCGTGCTCC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGCTGGAGCTGGTCGGTaGCAGAGAATCTTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPAGAGR*QRILSC
Trigger: GCAGGACAAGATTCTCTGCCACCGACCAGCTCCAGC...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGAGACGAAGAGCAGCTaGGCACGGCTGGAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTETKSS*ARLELV
Trigger: GACCAGCTCCAGCCGTGCCCAGCTGCTCTTCGTCTC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp TCACCGCAGGAGGCCCACAACCCCTCCCAGCTGCATATCGGCTCACATTCACGCATCGGTAGAGGAGGGTaGCTCACACTTCTAAGATGT +
Preference number: 4 (lower is better)
Translates to: SPQEAHNPSQLHIGSHSRIGRGG*LTLLRC
Trigger: ACATCTTAGAAGTGTGAGCCACCCTCCTCTACCGAT...GCGTGAATGTGAGCCGATATGCAGCTGGGAGGGGTTGTGGGCCTCCTGCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGAGTGTTCTCAGGAGTaGGCATGTTTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQECSQE*ACLSRS
Trigger: AGAACGAGATAAACATGCCCACTCCTGAGAACACTC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCCTGTTGTATGGGCTTaGGTGTGGTGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPPVVWA*VWCGGP
Trigger: AGGGCCACCACACCACACCCAAGCCCATACAACAGG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCTTACTTTCTTGACTTaGCCACAAGTCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQLTFLT*PQVCPA
Trigger: AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGGGTCATCCTGACATCTaGGTCACTCCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: GDCRGGVGPNHQGNKRGPGHPDI*VTPHIP
Trigger: GGGAATGTGGGGAGTGACCCAGATGTCAGGATGACC...CGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp TGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCCGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CRGGVGPNHQGNKRGPKVRHSIG*ACICLW
Trigger: CCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCG...GACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
3UTR CAA 72 bp GGGTGTAGGGATGGAAAGGGACCAGGATTCGCCTGTTaGGCTGGGAAAATCGGTAGAGGAGGGTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GCRDGKGPGFAC*AGKIGRGGWLT
Trigger: TGTGAGCCACCCTCCTCTACCGATTTTCCCAGCCAAACAGGCGAATCCTGGTCCCTTTCCATCCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GTGGACCGAAGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATAGGCCATACTTGTCCATaGCGATACCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VDRRSPNMLGSVNEVKVIGHTCP*RYPGAG
Trigger: CCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCC...TATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCTTCGGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGCCACGAGGACGACGATaGAGGAGACACCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKPRGRR*RRHQHH
Trigger: ATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGG...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR TCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGAGGCAGGTTGGGAATaGGGCAGGTCACCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTEAGWE*GRSPQS
Trigger: GCTTTGGGGTGACCTGCCTCATTCCCAACCTGCCTC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PLLWQEAESRHWRESACLSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: GRQNEGDSENVSAALALGSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GTGGACCGAAGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATATCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: VDRRSPNMLGSVNEVKVISWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...TATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCTTCGGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR GCA 90 bp CACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: HEDDDEGDTSIIDELDSWSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...CCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR GCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTAGTTTGTCATCCTCCTaGCTCTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPASLSSS*LCCSCR
Trigger: GCGGCAGCTGCAGCAGAGGCAGGAGGATGACAAACT...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGATGGCAGCCCCCTCTaGTTTGGCAAGAGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVDGSPL*FGKRQN
Trigger: ATTCTGCCTCTTGCCAAAGCAGAGGGGGCTGCCATC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCAGAGAATCTTGTCCTaGCTTTTCTTCTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAQRILS*LFFSSS
Trigger: TGAGCTTGAGAAGAAAAGGCAGGACAAGATTCTCTG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTCACATTCACGCGGCTaGCACACAAGTGCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPSHSRG*HTSASE
Trigger: TTCCGACGCACTTGTGTGGCAGCCGCGTGAATGTGA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTCGTCCCCAGCTTCCCTaGCTCCACCGGTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DDDEGDTSIIDELDSWKGRPQLP*LHRSQL
Trigger: CAGCTGAGACCGGTGGAGGCAGGGAAGCTGGGGACG...ACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTCTTCTCGCCTTGGTTaGCGTCTTTCTCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPSSRLG*RLSPRA
Trigger: AGCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCAGCCCCCTCTGCTTTaGCAAGAGGCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVQPPLL*QEAESR
Trigger: TCTGGATTCTGCCTCTTGCCAAAGCAGAGGGGGCTG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCAGGAAGGTCTTTTCCTaGCCCACTGTCCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSRKVFS*PTVPPE
Trigger: CTCGGGAGGGACAGTGGGCCAGGAAAAGACCTTCCT...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGGGCACTTGTCTTGCTaGTTGGGGTCACCAGGGATT +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVGHLSC*LGSPGI
Trigger: AATCCCTGGTGACCCCAACCAGCAAGACAAGTGCCC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTTCCCACAGTCTGTATTaGCGGAAGACGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPASHSLY*RKTGWH
Trigger: GTGCCAGCCCGTCTTCCGCCAATACAGACTGTGGGA...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGGCTCTCCTGTTGTATaGGCTTGGGTGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVGSPVV*AWVWCG
Trigger: ACCACACCACACCCAAGCCCATACAACAGGAGAGCC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTGTTCTTTCCAGCAATaGAAAGGGATTCAGCGAGGT +
Preference number: 4 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRCSFQQ*KGIQRG
Trigger: ACCTCGCTGAATCCCTTTCCATTGCTGGAAAGAACA...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR TCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR GCA 90 bp AGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCATCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: RSPNMLGSVNEVKVIHIPSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...TGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR GCA 90 bp GTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCGCCGAACATGTTGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VGPNHQGNKRGPKVAEHVGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...AACATGTTCGGCGACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp AAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGAAAGATGAGCCGCAGCTaGGTGACGCACATGGTGACC +
Preference number: 4 (lower is better)
Translates to: KGDCRGGVGPNHQGNKRGKMSRS*VTHMVT
Trigger: GGTCACCATGTGCGTCACGCAGCTGCGGCTCATCTT...TCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTACTGCGGCATCCGGCTaGCACTTCACCTCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: DDDEGDTSIIDELDSWKGTAASG*HFTSRS
Trigger: CGACCTGGAGGTGAAGTGCCAGCCGGATGCCGCAGT...ACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPYTKAS*LDEPLI
Trigger: AATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCACTTGTCTTGCTGGTTaGGGTCACCAGGGATTGCTC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVTCLAG*GHQGLL
Trigger: GAGCAATCCCTGGTGACCCCAACCAGCAAGACAAGT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGCTTACTTTCTTGACTTaGCCACAAGTCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRLTFLT*PQVCPA
Trigger: AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAG...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
3UTR CAA 72 bp AGCCACCTCGCTGGGACCAGACCTTACTTTCTTGACTaGGCCACAAGTCTGTCCTGCTCAGAGCTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SHLAGTRPYFLD*ATSLSCSELLK
Trigger: TTTCAGCAGCTCTGAGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATCCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp GGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGGCAGTGTTAATGAGGTaGAGGTCATACACATCCCAC +
Preference number: 4 (lower is better)
Translates to: GKGSRGQLKKQLRKTSPEAVLMR*RSYTSH
Trigger: GTGGGATGTGTATGACCTTCACCTCATTAACACTGC...CTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR TCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTCGATTGTGTGCAGGATaGAGGAGAGGATCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPARLCAG*RRGSGE
Trigger: CTCTCCAGATCCTCTCCTTCATCCTGCACACAATCG...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGCCCCGGCTCTGCTGTaGCGCCCACTGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLAPALL*RPLCHW
Trigger: CCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLQLTSS*PGSAVP
Trigger: CGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PGKGSRGQLKKQLRKTSPSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...CGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp GACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTTCCTGGAAAGGTGACTaGCGAGGAGGCGTAGGACCC +
Preference number: 4 (lower is better)
Translates to: DDDEGDTSIIDELDSWKGSWKGD*RGGVGP
Trigger: GGGTCCTACGCCTCCTCGGCAGTCACCTTTCCAGGA...ACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000576721.5
ENST00000631603.1
ENST00000633255.1
ENST00000633994.1
CDS-3UTR GCA 90 bp GAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGGCTGAACACGCTGTaGATGAAGGAGGGGGCCACT +
Preference number: 4 (lower is better)
Translates to: EDDDEGDTSIIDELDSWKGLNTL*MKEGAT
Trigger: AGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCC...TTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp GAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAACAGCTCTCCTGCTGTTaGCTTCGGCTGACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EDDDEGDTSIIDELDSWKQLSCC*LRLTSP
Trigger: TGGGGAGGTCAGCCGAAGGCAACAGCAGGAGAGCTG...TTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCATGAAGGAGAGGATCTaGAGAGGCAGGTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVMKERI*RGRLGM
Trigger: CATTCCCAACCTGCCTCTCCAGATCCTCTCCTTCAT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCAGGCGACAGGGGGCTaGAATTACAAAGGAATTAGC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVQATGG*NYKGIS
Trigger: GCTAATTCCTTTGTAATTCCAGCCCCCTGTCGCCTG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp TGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGTCATCCTGACATCTaGGTCACTCCCCACATTCCC +
Preference number: 4 (lower is better)
Translates to: WKGDCRGGVGPNHQGNKRGHPDI*VTPHIP
Trigger: GGGAATGTGGGGAGTGACCCAGATGTCAGGATGACC...ACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CCA 90 bp AACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCACCAAAGCCACCGCGAAGCAGGCGCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: NMLGSVNEVKVIHIPPKPPRSRR*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGCGCCTGCTTCGCGG...TGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR TCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCAGACCTTACTTTCTTaGCTTGGCCACAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVQTLLS*LGHKSV
Trigger: GACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTG...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCACCAAAGCCATCCTGCAGCGCCACCTaGTCCTTGGCACTCCTCATG +
Preference number: 4 (lower is better)
Translates to: NMLGSVNEVKVIHIPPKPSCSAT*SLALLM
Trigger: CATGAGGAGTGCCAAGGAGCAGGTGGCGCTGCAGGA...TGGCTTTGGTGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR GCA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAVIFWI*RSRFFF
Trigger: AAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCAC...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGGGTTTCTCCGAATCTaGAACTCCTGTGTGATGGCG +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTGFLRI*NSCVMA
Trigger: CGCCATCACACAGGAGTTGCAGATTCGGAGAAACCC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp GCTGCTGTCTGGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCACCTGACATGCCCGGATaGATCTCACACTTAGATAAA +
Preference number: 4 (lower is better)
Translates to: AAVWDSLMHVSPILDVPPPDMPG*ISHLDK
Trigger: TTTATCTAAGTGTGAGATGCATCCGGGCATGTCAGG...TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CCA 90 bp CACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: HEDDDEGDTSIIDELDSWHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...CCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp AAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACACGGAGAGAGCGTTTaGTTTACTTGCTCCGTACGC +
Preference number: 4 (lower is better)
Translates to: KGDCRGGVGPNHQGNKRGHGESV*FTCSVR
Trigger: GCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTG...TCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CCA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTTTTTCTTCTCGCCTTaGTTGGCGTCTTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPFFFSP*LASFSS
Trigger: CGAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCGAATCTTCAGGGTTGTaGAAGGGTGTAGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVESSGL*KGVGME
Trigger: TTCCATCCCTACACCCTTCCACAACCCTGAAGATTC...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCTTCCCGCCAGAGCCTaGAGGATGAGGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLLPARA*RMRGRR
Trigger: CCGTCTGCCCCTCATCCTCCAGGCTCTGGCGGGAAG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAACCACTGTGCCATTGGTaGCATTCTCTGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: EDDDEGDTSIIDELDSWKPLCHW*HSLARY
Trigger: GTACCGAGCCAGAGAATGTCACCAATGGCACAGTGG...TTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR TCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTAGAACTGCTTCCCTGTaGTCTTGTGGTCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTRTASL*SCGQSP
Trigger: TGGGCTTTGACCACAAGATCACAGGGAAGCAGTTCT...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR TCA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCCATGCAGCTATTAACTaGTATGCCAGAAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSHAAIN*YARRGI
Trigger: GATGCCCCTTCTGGCATATCAGTTAATAGCTGCATG...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCAAACTTGTCCACCAGTaGTTGATTATCTCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVKLVHQ*LIISSS
Trigger: GCTGCTCGAGATAATCAATCACTGGTGGACAAGTTT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGCAGAATCCAGACACTaGCGGGAGAGCGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLAESRH*RESACL
Trigger: CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGGTGCTGTGGGCCTGTaGCCTTGGACAAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLGAVGL*PWTSSW
Trigger: CCAGGAGCTTGTCCAAGGCCACAGGCCCACAGCACC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp GTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCGCCGAACATGTTGCTTGCATTTGCCTGTaGACTCCCGTAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: VGPNHQGNKRGPKVAEHVACICL*TPVGHP
Trigger: AGGATGACCTACGGGAGTCCACAGGCAAATGCAAGC...AACATGTTCGGCGACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR GCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLARNSG*CRRAKS
Trigger: GCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR GCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTTGTGTATGTACGGGGTaGCCTGGCGGCGGTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLCVCTG*PGGGPQ
Trigger: TTGAGGACCGCCGCCAGGGCACCCCGTACATACACA...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR TCA 90 bp GACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTGACGGAGTAAAAGCCCTCTaGCTTGAGCATGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: DDEGDTSIIDELDSWKGDGVKAL*LEHDEQ
Trigger: CTGCTCATCATGCTCAAGTCAGAGGGCTTTTACTCC...GTCACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR GCA 90 bp AAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGAAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: KGDCRGGVGPNHQGNKRGSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...TCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR GCA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR GCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTCGGCTGCCACACAAGTaGGTCGGAAACTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLRLPHK*VGNSTW
Trigger: CCAAGTGGAGTTTCCGACGCACTTGTGTGGCAGCCG...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGAGTGTTCTCAGGAGTaGGCATGTTTATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTECSQE*ACLSRS
Trigger: AGAACGAGATAAACATGCCCACTCCTGAGAACACTC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CCA 90 bp CTAACATCACAAAACGAGTGTTCTCAGGAGTGGGCATGTTTATCTCGTTCTCTTGGCTTCGGAGAAGGGTaGGGTCAGCAGATACAGACC +
Preference number: 4 (lower is better)
Translates to: LTSQNECSQEWACLSRSLGFGEG*GQQIQT
Trigger: GGTCTGTATCTGCTGACCCCACCCTTCTCCGAAGCC...AAGAGAACGAGATAAACATGCCCACTCCTGAGAACACTCGTTTTGTGATGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CCA 90 bp GACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DDDEGDTSIIDELDSWKGIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...ACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR CCA 90 bp GAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAATTGGTGACATTCTCTaGCTCGGTACACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EDDDEGDTSIIDELDSWKIGDIL*LGTQVG
Trigger: TCCTACCTGTGTACCGAGCCAGAGAATGTCACCAAT...TTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR GCA 90 bp GACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTCCTGGAAAGGTGACAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAA +
Preference number: 4 (lower is better)
Translates to: DDEGDTSIIDELDSWKGDSVWFT*SVRNQQ
Trigger: TTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCT...GTCACCTTTCCAGGAATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
3UTR CAA 72 bp CAAAGTGCTGTCAGTGCTGGCTGTAAGGAAACAGGCTaGACTTTTAACTCAGCCTTTCCCAAACTTGACTAT +
Preference number: 4 (lower is better)
Translates to: QSAVSAGCKETG*TFNSAFPKLDY
Trigger: ATAGTCAAGTTTGGGAAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTACAGCCAGCACTGACAGCACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: GGPGGRASPVISSRAPRSNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCCCGCCCACTGTGCCATaGGTGACATTCTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: GGPGGRASPVISSRAPRSPPTVP*VTFSGS
Trigger: CGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGG...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATTGTGGGCCTGTGGCCTaGGACAAGCTCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHCGPVA*DKLLAP
Trigger: TGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACA...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS TCA 90 bp ATAATGGCTGTTCGAAGCCGCGGTGCCGGAGTGAGGGCTGAGCGCTaGGCAGAGCGCCCTAGCGCGGGCCTCGAGGGCTGGCGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: IMAVRSRGAGVRAER*AERPSAGLEGWRRG
Trigger: TCCCCTCCGCCAGCCCTCGAGGCCCGCGCTAGGGCGCTCTGCTCAGCGCTCAGCCCTCACTCCGGCACCGCGGCTTCGAACAGCCATTAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCTGTGGGCCTGTGGCCTaGGACAAGCTCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSCGPVA*DKLLAP
Trigger: TGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACA...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGTGCTGGCTCTGACCTaGAACAAGCTCCTCCATCGC +
Preference number: 5 (lower is better)
Translates to: GGPGGRASPVISSRAPRSVLALT*NKLLHR
Trigger: GCGATGGAGGAGCTTGTTCAAGGTCAGAGCCAGCAC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: GGPGGRASPVISSRAPRSARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: QARARQCKPLSSGRYGCGNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCATTTGGTCTTCCCTCCTaGCCTCCTCGGCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPFGLPS*PPRPGV
Trigger: CACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAAA...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGCCGCCCACTGTGCCATaGGTGACATTCTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: TRVSGALSRPSTTELRGRPPTVP*VTFSGS
Trigger: CGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGG...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATCCTGCAACCACGTCTTaGGCCCCGGTGAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LEDEGQTGGPATGACSFDPATTS*APVRGG
Trigger: CCCACCCCTCACCGGGGCCAAAGACGTGGTTGCAGG...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGCTCCAGGGCCCCACGGAGCGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: GGPGGRASPVISSRAPRSERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...GCTCCGTGGGGCCCTGGAGCTGATGACGGGGGAGGCCCGTCCGCCTGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GSQGGRVGGPGGRASPVICFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTGTGGGCCTGTGGCCTaGGACAAGCTCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: FGKRQNPDTGGRAPACRACGPVA*DKLLAP
Trigger: TGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACA...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGTGTGGGCCTGTGGCCTaGGACAAGCTCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: QARARQCKPLSSGRYGCGCGPVA*DKLLAP
Trigger: TGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACA...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 90 bp TGGGCCTGGCAGCTGAGCCAGCCGTTCATCCAGCTCACCTCCTCGTaGCCCGGCTCTGCTGTGCCGCCCACTGTGCCATTGGTGACATTC +
Preference number: 5 (lower is better)
Translates to: WAWQLSQPFIQLTSS*PGSAVPPTVPLVTF
Trigger: GAATGTCACCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000572135.5
ENST00000574743.5
ENST00000575944.1
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000632084.1
ENST00000632428.1
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTCCGCCCACTGTGCCATaGGTGACATTCTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPPPTVP*VTFSGS
Trigger: CGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGG...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCATGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPCFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSTKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGAACGTGTCCGCGGCATaGGCCCTCGGGGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWNVSAA*ALGEEA
Trigger: CGCCTCCTCCCCGAGGGCCAATGCCGCGGACACGTT...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp ACGCGCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGACAAGCCCAGTTTGTTaGGGGGTTGGGGAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: TRVSGALSRPSTTELRGRTSPVC*GVGEEG
Trigger: ACCTTCCTCCCCAACCCCCAAACAAACTGGGCTTGT...CCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCACTGGTGCCTGCTCCTTaGATCAGCTGTAGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPLVPAP*ISCSPF
Trigger: GAAGGGACTACAGCTGATCAAAGGAGCAGGCACCAG...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCAGAGGCCTAGAGGGTTaGGAGAAGGCCGACCACAAA +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSRGLEG*EKADHK
Trigger: TTTGTGGTCGGCCTTCTCCAAACCCTCTAGGCCTCT...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATTTTGGTCTTCCCTCCTaGCCTCCTCGGCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LEDEGQTGGPATGACSFDFGLPS*PPRPGV
Trigger: CACCCCAGGCCGAGGAGGCAAGGAGGGAAGACCAAA...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS TCA 90 bp GCCGGTAGCAGATCAGGTAGAGCGGGAGGCAGAAGCCCAGCAGGCTaGGAAGGAGCAGCCCCACGTTCACCCACAGAGGGTCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AGSRSGRAGGRSPAG*EGAAPRSPTEGLPG
Trigger: TCCAGGGAGACCCTCTGTGGGTGAACGTGGGGCTGCTCCTTCTCAGCCTGCTGGGCTTCTGCCTCCCGCTCTACCTGATCTGCTACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 90 bp GCTGAGCCAGCCGTTCATCCAGCTCACCTCCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCCATTGGTGACATTCTCTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: AEPAVHPAHLLVPRL*CAAHCAIGDILWLG
Trigger: ACCGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGCTGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000572135.5
ENST00000574743.5
ENST00000575944.1
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000632084.1
ENST00000632428.1
ENST00000634102.1
CDS GCA 90 bp AACAGCGGCTGCTGCAGAAGGGCGAAGAGCGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCGAACTGGGTGGAGGGGTACACGGCA +
Preference number: 5 (lower is better)
Translates to: NSGCCRRAKSALIRD*SPVRLPNWVEGYTA
Trigger: TGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCCTTCTGCAGCAGCCGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGTTCCTGGCTCCTTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: QNPDTGGRAPACRAFLAPFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...AGGAGCCAGGAACGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGTGTCCGGGGCCCTCTCCCGTCCTTCCACCACAGAGCTCCGAGGCAGGGCCCCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: ACPGPSPVLPPQSSEAGPLFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...GGGCCCTGCCTCGGAGCTCTGTGGTGGAAGGACGGGAGAGGGCCCCGGACACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCCTGTTAATGTGGAGCTaGAATGTGGCCTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSLLMWS*NVAWTC
Trigger: GCAGGTCCAGGCCACATTCAAGCTCCACATTAACAG...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTGGGGTCACCAGGGATaGCTCCCCCAAGTACCCATC +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAWGHQG*LPQVPI
Trigger: GATGGGTACTTGGGGGAGCAATCCCTGGTGACCCCA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTCCTGCAACCACGTCTTaGGCCCCGGTGAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCPATTS*APVRGG
Trigger: CCCACCCCTCACCGGGGCCAAAGACGTGGTTGCAGG...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCCGTCGGAAACTCCACTaGGCTGAACGTGATTGTGCT +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSRRKLH*AERDCA
Trigger: AGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACG...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGAGTTTCTTAAGGCTTaGCTCGGAGAGGGCTTCGGA +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPEFLKA*LGEGFG
Trigger: TCCGAAGCCCTCTCCGAGCAAAGCCTTAAGAAACTC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGGGGAAGGACCAGCTTaGCTGCCAAGCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQGEGPA*LPSRKP
Trigger: CGGCTTCCTGCTTGGCAGCAAAGCTGGTCCTTCCCC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp AGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCACGGATGGGCTTGCATTaGCCTGTGGACTCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: SPEQPAQTTRTTMKETPARMGLH*PVDSRR
Trigger: CCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCG...TGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp GATCTTCACCGAGTAGTCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAACAGCTCTCCTGCTGTaGCCTTCGGCTGACCTCCCC +
Preference number: 5 (lower is better)
Translates to: DLHRVVHVLRPREGLKGPTALLL*PSADLP
Trigger: GGGGAGGTCAGCCGAAGGCAACAGCAGGAGAGCTGT...TGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGACTACTCGGTGAAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGCCGCCCACTGTGCCATaGGTGACATTCTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEPPTVP*VTFSGS
Trigger: CGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGG...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGGAGGATGAGGGGCAGACGGGAGGCCCGGCCACTGGTGCCTGCTCCTTTGATTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LEDEGQTGGPATGACSFDFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...ATCAAAGGAGCAGGCACCAGTGGCCGGGCCTCCCGTCTGCCCCTCATCCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTAACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVTKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCTCAAGACTGGCTTTTaGGCTAGGCATTGTGACTCA +
Preference number: 5 (lower is better)
Translates to: GQSRWAGWWARRTGLPRHLKTGF*ARHCDS
Trigger: TGAGTCACAATGCCTAGCCAAAAAGCCAGTCTTGAG...ATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCACAGGGCACTTGTCTaGCTGGTTGGGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSHRALV*LVGVTR
Trigger: CCTGGTGACCCCAACCAGCAAGACAAGTGCCCTGTG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGATCCCACAGTCTGTATaGGCGGAAGACGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FGKRQNPDTGGRAPACRAIPQSV*AEDGLA
Trigger: TGCCAGCCCGTCTTCCGCCAATACAGACTGTGGGAT...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGTCAAGGTGGGCGGGTTGGTGGGCCAGGCGGACGGGCCTCCCCCGTCATCCCAGACCTTACTTTCTaGACTTGGCCACAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GSQGGRVGGPGGRASPVIPDLTF*TWPQVC
Trigger: ACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGG...GATGACGGGGGAGGCCCGTCCGCCTGGCCCACCAACCCGCCCACCTTGACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGGGTCAGCCGCTGGGTaGACCCTGGTTAATACAGGG +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSGSAAG*TLVNTG
Trigger: CCCTGTATTAACCAGGGTCAACCCAGCGGCTGACCC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGGGGAAGGACCAGCTTaGCTGCCAAGCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETGEGPA*LPSRKP
Trigger: CGGCTTCCTGCTTGGCAGCAAAGCTGGTCCTTCCCC...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCGGATGGGCTTGCATTaGCCTGTGGACTCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRMGLH*PVDSRR
Trigger: CCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCCGGATGGGCTTGCATTaGCCTGTGGACTCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSRMGLH*PVDSRR
Trigger: CCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCG...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCAGGTCGCCGAACATGTaGGGCAGCTCCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSRSPNM*GSSCCC
Trigger: GCAACAGCAGGAGCTGCCCAACATGTTCGGCGACCT...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS TCA 90 bp GTTGGGCAGTGCCTCCACGCAGCCTCAGTCACACAGGGAAGCCCGTaGCTCTCTCTCTTTCAGCCCCCTGGCTGCAGCATAAACAGGCCG +
Preference number: 5 (lower is better)
Translates to: VGQCLHAASVTQGSP*LSLFQPPGCSINRP
Trigger: CGGCCTGTTTATGCTGCAGCCAGGGGGCTGAAAGAGAGAGAGTCACGGGCTTCCCTGTGTGACTGAGGCTGCGTGGAGGCACTGCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574274.5
ENST00000634196.1
CDS GCA 90 bp AGAGGGTCTCCCTGGAGAGGACCCATCATGGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGCGCGCTGATCAGAGACTGCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RGSPWRGPIMARNSG*CRRAKSALIRDCSP
Trigger: GGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCCAGGGAGACCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: QARARQCKPLSSGRYGCGFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...CCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCAGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: SPEQPAQTTRTTMKETPAARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...TGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAACFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CACGTCCCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: HVPTPAWTSTSAGHSLSSDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...GGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGCCTGCCTGCCGGGCGTTCCTGGCTCCTGCTGCAGGCACCACAGAGACCCCAGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: APACRAFLAPAAGTTETPDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...TGGGGTCTCTGTGGTGCCTGCAGCAGGAGCCAGGAACGCCCGGCAGGCAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAATKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGTGGTGAGCTATCAGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEVVSYQ*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACTGATAGCTCACCAC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGTGCTGGCTCTGACCTaGAACAAGCTCCTCCATCGC +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSVLALT*NKLLHR
Trigger: GCGATGGAGGAGCTTGTTCAAGGTCAGAGCCAGCAC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp TTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCGGGCGCTGGTGCCTGCTCCTTaGATCAGCTGTAGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: FGKRQNPDTGGRAPACRALVPAP*ISCSPF
Trigger: GAAGGGACTACAGCTGATCAAAGGAGCAGGCACCAG...CGCCCGGCAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAACGGATGGGCTTGCATTaGCCTGTGGACTCCCGTAGG +
Preference number: 5 (lower is better)
Translates to: VEENQPGAAGPDHEDDDERMGLH*PVDSRR
Trigger: CCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCG...TTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCAGCATCGGATGGGCTaGCATTTGCCTGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQQHRMG*HLPVDS
Trigger: GGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGGTCGCCGAACATGTaGGGCAGCTCCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETRSPNM*GSSCCC
Trigger: GCAACAGCAGGAGCTGCCCAACATGTTCGGCGACCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS GCA 90 bp GACCTCCCCATGGTCCAGCGCCACAGCATCGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGTCATCCTGACATCTGGGTCACTCCC +
Preference number: 5 (lower is better)
Translates to: DLPMVQRHSIGWACI*LWTPVGHPDIWVTP
Trigger: GGGAGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS GCA 90 bp TCGGCTGACCTCCCCATGGTCCAGCGCCACAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCCGTAGGTCATCCTGACATCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SADLPMVQRHSIGWA*ICLWTPVGHPDIWV
Trigger: GACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 90 bp TGGGTGGAGGGGTACACGGCAGCGTACAGGCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATTGTGTGCAGGATGAAGGAGAGGATC +
Preference number: 5 (lower is better)
Translates to: WVEGYTAAYRPPTAE*MNPRTIVCRMKERI
Trigger: GATCCTCTCCTTCATCCTGCACACAATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGGCCTGTACGCTGCCGTGTACCCCTCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS CCA 90 bp CAGGAACCACAGCTCTCCTGCTGTTGCCTTCGGCTGACCTCCCCATaGTCCAGCGCCACAGCATCGGATGGGCTTGCATTTGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: QEPQLSCCCLRLTSP*SSATASDGLAFACG
Trigger: TCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCGAAGGCAACAGCAGGAGAGCTGTGGTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAARSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PGAAGPDHEDDDEGDTSIRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...GATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRCFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMCFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAAPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCATTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: RARQCKPLSSGRYGCGHAFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGGTGGGGGCCAGGCGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: GWGPGAGETVQAFVLRQVLFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...TACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCGCCTGGCCCCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RGALAAVLKFPSGGRQNETKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQTKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCAGACAGTGCAAGCCTTaGTCCTCAGGCAGGTACGGC +
Preference number: 5 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVRQCKP*SSGRYG
Trigger: GCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCGGGAATCTTCAGGGTaGTGGAAGGGTGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRRESSG*WKGVGM
Trigger: CATCCCTACACCCTTCCACAACCCTGAAGATTCCCG...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCCCTTCACAGGGCACTaGTCTTGCTGGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETPFTGH*SCWLGS
Trigger: TGACCCCAACCAGCAAGACAAGTGCCCTGTGAAGGG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCCTTCACAGGGCACTaGTCTTGCTGGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GRQNEGDSENVSAALALGPFTGH*SCWLGS
Trigger: TGACCCCAACCAGCAAGACAAGTGCCCTGTGAAGGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCAGCATCGGATGGGCTaGCATTTGCCTGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETQHRMG*HLPVDS
Trigger: GGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS CCA 90 bp TTGCCTTCGGCTGACCTCCCCATGGTCCAGCGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGGACTCCCGTAGGTCATCCTGACATC +
Preference number: 5 (lower is better)
Translates to: LPSADLPMVQRHSIG*ACICLWTPVGHPDI
Trigger: GATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAGGTCAGCCGAAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp TTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: LRKTSPEQPAQTTRTTMKFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...CTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR CAA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AGGATGGGGCTGAACACGCTGTGCATGAAGGAGGGGGCCACTGCGGCATCCGGCGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: RMGLNTLCMKEGATAASGERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...GCCGGATGCCGCAGTGGCCCCCTCCTTCATGCACAGCGTGTTCAGCCCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp TTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: LRKTSPEQPAQTTRTTMKARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: QGSVTEAQAGDRSSEAAALFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...GGCTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: RARQCKPLSSGRYGCGHATKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...TGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGCCAGGATTCGCCTGTTaGGCTGGGAAAATCGGTAGA +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQPGFAC*AGKIGR
Trigger: TCTACCGATTTTCCCAGCCAAACAGGCGAATCCTGG...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGCGGGAATCTTCAGGGTaGTGGAAGGGTGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGRESSG*WKGVGM
Trigger: CATCCCTACACCCTTCCACAACCCTGAAGATTCCCG...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGGTGGTGAGCTATCAGTaGCACCACTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRVVSYQ*HHCTPA
Trigger: GGCTGGAGTGCAGTGGTGCAACTGATAGCTCACCAC...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCACTTGTCTTGCTGGTaGGGGTCACCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETHLSCW*GSPGIA
Trigger: AGCAATCCCTGGTGACCCCAACCAGCAAGACAAGTG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGATCCCACAGTCTGTATaGGCGGAAGACGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEIPQSV*AEDGLA
Trigger: TGCCAGCCCGTCTTCCGCCAATACAGACTGTGGGAT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS TCA 90 bp CATCGGATGGGCTTGCATTTGCCTGTGGACTCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCACATTCCCCCTCTCGCTCACTCCGT +
Preference number: 5 (lower is better)
Translates to: HRMGLHLPVDSRRSS*HLGHSPHSPSRSLR
Trigger: ACGGAGTGAGCGAGAGGGGGAATGTGGGGAGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 90 bp CCCATGGTCCAGCGCCACAGCATCGGATGGGCTTGCATTTGCCTGTaGACTCCCGTAGGTCATCCTGACATCTGGGTCACTCCCCACATT +
Preference number: 5 (lower is better)
Translates to: PMVQRHSIGWACICL*TPVGHPDIWVTPHI
Trigger: AATGTGGGGAGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS-3UTR CAA 90 bp GTCCATGTCCTCCGGCCCCGGGAAGGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: VHVLRPREGLKGPVKEAVARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...AACTGCTTCTTTAACTGGCCCCTTGAGCCCTTCCCGGGGCCGGAGGACATGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: GRQNEGDSENVSAALALGPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEALFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTG +
Preference number: 5 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRTKASW*DEPLIL
Trigger: CAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCCAGGATTCGCCTGTTaGGCTGGGAAAATCGGTAGA +
Preference number: 5 (lower is better)
Translates to: PLLWQEAESRHWRESACLPGFAC*AGKIGR
Trigger: TCTACCGATTTTCCCAGCCAAACAGGCGAATCCTGG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCTGTTAATGTGGAGCTaGAATGTGGCCTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: PLLWQEAESRHWRESACLLLMWS*NVAWTC
Trigger: GCAGGTCCAGGCCACATTCAAGCTCCACATTAACAG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCCACCCCGGCCTGGACCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCTGTAAGGAAACAGGCTaGACTTTTAACTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PTPAWTSTSAGHSLSSTSCKETG*TFNSAF
Trigger: AAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTACA...GGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGGTCCAGGCCGGGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGGCTCAAGGGGCCAGTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCCAGCATCGGATGGGCTaGCATTTGCCTGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: GLKGPVKEAVEENQPGAAQHRMG*HLPVDS
Trigger: GGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTG...GGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAACTGGCCCCTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS CCA 90 bp AGGAGACCGCAGTTCCGAGGCGGCAGCCACTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATTTTGAGGAAGAGTTTGTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: RRPQFRGGSHYTKAS*LDEPLILRKSLSSS
Trigger: GGAGGATGACAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTAGTGGCTGCCGCCTCGGAACTGCGGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGCACGGAGAGAGCGTTaGGTTTACTTGCTCCGTACG +
Preference number: 5 (lower is better)
Translates to: VKEAVEENQPGAAGPDHEARRER*VYLLRT
Trigger: CGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGC...CTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: QLCVCTGCPGGGPQIPFRRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...CCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GTTAAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: VKEAVEENQPGAAGPDHECFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...CTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCCGCTGACCAGGAACTaGAGGATGTTGTTCATAGCC +
Preference number: 5 (lower is better)
Translates to: KATQVECAAPPSVAFRSSPLTRN*RMLFIA
Trigger: GGCTATGAACAACATCCTCAAGTTCCTGGTCAGCGG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: PLLWQEAESRHWRESACLLFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRLFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCAGACAGAACGAGATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RGALAAVLKFPSGGRQNEILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...CTCGTTCTGTCTGCCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGCAGGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: DRGQSLKHRQETAVPRRQDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...CTGCCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GGAGQGSVTEAQAGDRSSWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...GGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEAWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGGTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: QDRGQSLKHRQETAVPRRWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...CCGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CGCGGGCGAGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RGRDSASLCPQAGTAVGMWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...CATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCTCGCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTTGTGGGCCTGTGGCCTaGGACAAGCTCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTCGPVA*DKLLAP
Trigger: TGGGGCCAGGAGCTTGTCCAAGGCCACAGGCCCACA...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTTGGGGTCACCAGGGATaGCTCCCCCAAGTACCCATC +
Preference number: 5 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPWGHQG*LPQVPI
Trigger: GATGGGTACTTGGGGGAGCAATCCCTGGTGACCCCA...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCGTCGGAAACTCCACTaGGCTGAACGTGATTGTGCT +
Preference number: 5 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWRRKLH*AERDCA
Trigger: AGCACAATCACGTTCAGCCAAGTGGAGTTTCCGACG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGCCTTACTTTCTTGACTaGGCCACAAGTCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GRQNEGDSENVSAALALGPYFLD*ATSLSC
Trigger: GCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGG...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGCAGCATCGGATGGGCTaGCATTTGCCTGTGGACTCC +
Preference number: 5 (lower is better)
Translates to: GDCRGGVGPNHQGNKRGPQHRMG*HLPVDS
Trigger: GGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTG...CGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS CCA 90 bp ACAGTACCTGCTGATTCGGTGGCGGACGGGGTAGGAACTCCATTCTaGAGGGCCTTCAGGGAGCTCCACAGTACACCTGATATCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TVPADSVADGVGTPF*RAFRELHSTPDIRY
Trigger: GTACCTGATATCAGGTGTACTGTGGAGCTCCCTGAAGGCCCTCCAGAATGGAGTTCCTACCCCGTCCGCCACCGAATCAGCAGGTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS-3UTR CAA 90 bp AAAGAAGCAGTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: KEAVEENQPGAAGPDHEDERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...GTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAACTGCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp GGTACTCTGGAGGGGCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GTLEGQDRGQSLKHRQETILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...GGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGCCCCTCCAGAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCTGCTTTGGCAAGAGGCAGAATCCAGACACTGGCGGGAGAGCGCCTGCCTGATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PLLWQEAESRHWRESACLILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...CAGGCAGGCGCTCTCCCGCCAGTGTCTGGATTCTGCCTCTTGCCAAAGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGGGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: DSASLCPQAGTAVGMQPRDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...CCTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VHLHKSSCVYVRGALAAVWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...GACCGCCGCCAGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGGTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ADRTRVTVKTCPRHWPSGWLDEP*ILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCA...CCCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp ACCTCGCTGGGACCAGACCTTACTTTCTTGACTTGGCCACAAGTCTGTCCTGCTCACAGGGCACTTGTCTaGCTGGTTGGGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TSLGPDLTFLTWPQVCPAHRALV*LVGVTR
Trigger: CCTGGTGACCCCAACCAGCAAGACAAGTGCCCTGTG...AGCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGGTCCCAGCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp CTGTGTGTATGTACGGGGTGCCCTGGCGGCGGTCCTCAAATTCCCTTCAGGTGGCCTTACTTTCTTGACTaGGCCACAAGTCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LCVCTGCPGGGPQIPFRWPYFLD*ATSLSC
Trigger: GCAGGACAGACTTGTGGCCAAGTCAAGAAAGTAAGG...CCACCTGAAGGGAATTTGAGGACCGCCGCCAGGGCACCCCGTACATACACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCTACGTGACCGTGCCTaGAGTCGCCCCACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTLRDRA*SRPTQQ
Trigger: CTGCTGAGTGGGGCGACTCAAGGCACGGTCACGTAG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CAA 90 bp AGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAGGAGAGGTCGCCGAACATGTaGGGCAGTATTATGATATGT +
Preference number: 5 (lower is better)
Translates to: RKTSPEQPAQTTRTTMKERSPNM*GSIMIC
Trigger: ACATATCATAATACTGCCCAACATGTTCGGCGACCT...CTCCTTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS TCA 90 bp AGGAACTCCATTCTGGAGGGCCTTCAGGGAGCTCCACAGTACACCTaGTATCAGGTACGACCAGGATACCCTTCTGTGGGGAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: RNSILEGLQGAPQYT*YQVRPGYPSVGNSA
Trigger: GGCTGAGTTCCCCACAGAAGGGTATCCTGGTCGTACCTGATATCAGGTGTACTGTGGAGCTCCCTGAAGGCCCTCCAGAATGGAGTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS-3UTR CAA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATCCGCCCACTGTGCCATaGGTGACATTCTCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDPPTVP*VTFSGS
Trigger: CGAGCCAGAGAATGTCACCAATGGCACAGTGGGCGG...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR CAA 90 bp GACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: DCRGGVGPNHQGNKRGPKFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...CTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS-3UTR CAA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCTTCTTCTCGCCTTGGTaGGCGTCTTTCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSFFSPW*ASFSSG
Trigger: GCCCGAGGAGAAAGACGCCAACCAAGGCGAGAAGAA...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCTCCACGTCTGCCGGCCACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PPRLPATAFRPPPQKQLCILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...ACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGTGGCCGGCAGACGTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AGACAGTGCAAGCCTTTGTCCTCAGGCAGGTACGGCTGTGGGCATGCAGCCGAGATTTTGAGGAAGAGTTaGTCATCCTCCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: RQCKPLSSGRYGCGHAAEILRKS*SSSCLC
Trigger: GCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAAT...CTCGGCTGCATGCCCACAGCCGTACCTGCCTGAGGACAAAGGCTTGCACTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp GCGACAGGGGGCTGGAATTACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCACAAGCCCAGTTTGTTaGGGGGTTGGGGAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: ATGGWNYKGISTDNRKRVTSPVC*GVGEEG
Trigger: ACCTTCCTCCCCAACCCCCAAACAAACTGGGCTTGT...GACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTAATTCCAGCCCCCTGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTAGAGGCCTAGAGGGTTaGGAGAAGGCCGACCACAAA +
Preference number: 5 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPRGLEG*EKADHK
Trigger: TTTGTGGTCGGCCTTCTCCAAACCCTCTAGGCCTCT...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp TACAAAGGAATTAGCACCGACAACAGGAAGCGGGTCCTTCCTTCCTCAGGCAGCTTAGGCCCCCAGTCGTaGGCACAGATAAGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: YKGISTDNRKRVLPSSGSLGPQS*AQIRGA
Trigger: AGCTCCCCTTATCTGTGCCAACGACTGGGGGCCTAA...GCTGCCTGAGGAAGGAAGGACCCGCTTCCTGTTGTCGGTGCTAATTCCTTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTCCAGACCTTACTTTCTaGACTTGGCCACAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: KATQVECAAPPSVAFRSSPDLTF*TWPQVC
Trigger: ACAGACTTGTGGCCAAGTCAAGAAAGTAAGGTCTGG...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GTTGAGGAAAACCAGCCCGGAGCAGCCGGCCCAGACCACGAGGACGACGATGAAAGGTCGCCGAACATGTaGGGCAGTATTATGATATGT +
Preference number: 5 (lower is better)
Translates to: VEENQPGAAGPDHEDDDERSPNM*GSIMIC
Trigger: ACATATCATAATACTGCCCAACATGTTCGGCGACCT...TTCATCGTCGTCCTCGTGGTCTGGGCCGGCTGCTCCGGGCTGGTTTTCCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS GCA 90 bp TTGGTGAAGGCGAAGGCCCGCATGGCATTAGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTTTTCTTCTCGCCTTGGTTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: LVKAKARMALVIFWI*RSRFFFFFSPWLAS
Trigger: AGACGCCAACCAAGGCGAGAAGAAAAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCACTAATGCCATGCGGGCCTTCGCCTTCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 90 bp TTGGTGAAGGCGAAGGCCCGCATGGCATTAGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTTTTCTTCTCGCCTCTGTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: LVKAKARMALVIFWI*RSRFFFFFSPLWRH
Trigger: GTGTCTCCACAGAGGCGAGAAGAAAAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCACTAATGCCATGCGGGCCTTCGCCTTCACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576769.1
ENST00000633495.1
CDS-3UTR CAA 90 bp GCAGGACAGGGGTCAGTCACTGAAGCACAGGCAGGAGACCGCAGTTCCGAGGCGTGTAAGGAAACAGGCTaGACTTTTAACTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: AGQGSVTEAQAGDRSSEACKETG*TFNSAF
Trigger: AAAGGCTGAGTTAAAAGTCAAGCCTGTTTCCTTACA...CGCCTCGGAACTGCGGTCTCCTGCCTGTGCTTCAGTGACTGACCCCTGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTTTAGGCCCCCAGTCGTaGGCACAGATAAGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTLGPQS*AQIRGA
Trigger: AGCTCCCCTTATCTGTGCCAACGACTGGGGGCCTAA...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS TCA 90 bp TCCATAAAGAGGGGAGCAGTTGAAACGCATGCTGAGCTGAATGAGTaGGTCTCTCTAAGGGCTCCGGGAGCAGCTGGAGTGCATTGCTCT +
Preference number: 5 (lower is better)
Translates to: SIKRGAVETHAELNE*VSLRAPGAAGVHCS
Trigger: AGAGCAATGCACTCCAGCTGCTCCCGGAGCCCTTAGAGAGACTCACTCATTCAGCTCAGCATGCGTTTCAACTGCTCCCCTCTTTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572135.5
ENST00000574743.5
ENST00000616586.2
ENST00000632428.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTTTCCTCGGGCCATACTaGTCCATGACGATACCCAGG +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTFLGPY*SMTIPR
Trigger: CCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAA...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp CCAGACCACGAGGACGACGATGAAGGAGACACCAGCATCATAGATGAGCTTGATTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PDHEDDDEGDTSIIDELDCFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...ATCAAGCTCATCTATGATGCTGGTGTCTCCTTCATCGTCGTCCTCGTGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572801.5
ENST00000633994.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTTGCTTCCCTGTGATCTaGTGGTCAAAGCCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTCFPVI*WSKPSQ
Trigger: CTGGCTGGGCTTTGACCACAAGATCACAGGGAAGCA...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp ACAGCCTTTCGTCCACCTCCACAAAAGCAGCTGTGTGTATGTACGGGGTGCCCTCTTTTTCTTCTCGCCTaGGTTGGCGTCTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TAFRPPPQKQLCVCTGCPLFLLA*VGVFLL
Trigger: GAGGAGAAAGACGCCAACCAAGGCGAGAAGAAAAAG...AGGGCACCCCGTACATACACACAGCTGCTTTTGTGGAGGTGGACGAAAGGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCACTTGTCTTGCTGGTaGGGGTCACCAGGGATTGCT +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTHLSCW*GSPGIA
Trigger: AGCAATCCCTGGTGACCCCAACCAGCAAGACAAGTG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: WKGDCRGGVGPNHQGNKRRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...ACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp GGCAGACAGAACGAGGGTGACAGTGAAAACGTGTCCGCGGCATTGGCCCTCGGGTGTTTAACTCCCAGATaGTTATCAAGTCAAGGACAA +
Preference number: 5 (lower is better)
Translates to: GRQNEGDSENVSAALALGCLTPR*LSSQGQ
Trigger: TTGTCCTTGACTTGATAACAATCTGGGAGTTAAACA...CCCGAGGGCCAATGCCGCGGACACGTTTTCACTGTCACCCTCGTTCTGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp GCTGCTGTCTGGGACAGTCTTATGCACGTGAGCCCAATACTGGATGTCCCGCCAATCTCGAGCAGCTATTaGGCCAAGTCTTACCAAAAC +
Preference number: 5 (lower is better)
Translates to: AAVWDSLMHVSPILDVPPISSSY*AKSYQN
Trigger: GTTTTGGTAAGACTTGGCCAAATAGCTGCTCGAGAT...TGGCGGGACATCCAGTATTGGGCTCACGTGCATAAGACTGTCCCAGACAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301335.10
CDS-3UTR CAA 90 bp AAAGGTGACTGCCGAGGAGGCGTAGGACCCAATCATCAAGGCAATAAACGTGGAGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: KGDCRGGVGPNHQGNKRGERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...TCCACGTTTATTGCCTTGATGATTGGGTCCTACGCCTCCTCGGCAGTCACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp AGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCAAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: RSPNMLGSVNEVKVIHIPRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...TGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp GTAGGACCCAATCATCAAGGCAATAAACGTGGACCGAAGGTCGCCGAACATGTTAGGTCGCCGAACATGTaGGGCAGTGTTAATGAGGTG +
Preference number: 5 (lower is better)
Translates to: VGPNHQGNKRGPKVAEHVRSPNM*GSVNEV
Trigger: CACCTCATTAACACTGCCCAACATGTTCGGCGACCT...AACATGTTCGGCGACCTTCGGTCCACGTTTATTGCCTTGATGATTGGGTCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp AAGGCCACCCAGGTGGAGTGTGCTGCACCTCCTTCAGTGGCCTTCAGGAGCTCTTGTTTAACTCCCAGATaGTTATCAAGTCAAGGACAA +
Preference number: 5 (lower is better)
Translates to: KATQVECAAPPSVAFRSSCLTPR*LSSQGQ
Trigger: TTGTCCTTGACTTGATAACAATCTGGGAGTTAAACA...AGAGCTCCTGAAGGCCACTGAAGGAGGTGCAGCACACTCCACCTGGGTGGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS-3UTR CAA 90 bp AGGTCGCCGAACATGTTGGGCAGTGTTAATGAGGTGAAGGTCATACACATCCCAGAGCGTTTGGTTTACTaGCTCCGTACGCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: RSPNMLGSVNEVKVIHIPERLVY*LRTQSA
Trigger: TGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTC...TGGGATGTGTATGACCTTCACCTCATTAACACTGCCCAACATGTTCGGCGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571376.1
ENST00000572801.5
ENST00000631603.1
ENST00000633994.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCC +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTDEPLI*RKSLSS
Trigger: GGATGACAAACTCTTCCTCAAAATCAACGGCTCGTC...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS-3UTR CAA 90 bp AATCCAAACACAACTCACCCCTCTAAGCACGCCCAGGAGGTCTCAAGACACACTCTCAAGACTGGCTTTTaGGCTAGGCATTGTGACTCA +
Preference number: 5 (lower is better)
Translates to: NPNTTHPSKHAQEVSRHTLKTGF*ARHCDS
Trigger: TGAGTCACAATGCCTAGCCAAAAAGCCAGTCTTGAG...AGTGTGTCTTGAGACCTCCTGGGCGTGCTTAGAGGGGTGAGTTGTGTTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301335.10
ENST00000634102.1
CDS TCA 72 bp GTTCGAAGCCGCGGTGCCGGAGTGAGGGCTGAGCGCTaGGCAGAGCGCCCTAGCGCGGGCCTCGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: VRSRGAGVRAER*AERPSAGLEGW
Trigger: CCAGCCCTCGAGGCCCGCGCTAGGGCGCTCTGCTCAGCGCTCAGCCCTCACTCCGGCACCGCGGCTTCGAAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382147.8
ENST00000412517.3
CDS CCA 72 bp GGGCTGGGAGCCGGGGCACCGGCCCTGCCTACGCACTaGTTGGCGTCTTTCTCCTCGGGCTCCTCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GLGAGAPALPTH*LASFSSGSSEA
Trigger: CGCCTCCGAGGAGCCCGAGGAGAAAGACGCCAACCAGTGCGTAGGCAGGGCCGGTGCCCCGGCTCCCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572135.5
ENST00000574743.5
ENST00000616586.2
ENST00000632428.1
CDS CCA 72 bp TGGGAGCCGGGGCACCGGCCCTGCCTACGCACTGGTTaGCGTCTTTCTCCTCGGGCTCCTCGGAGGCGTCTT +
Preference number: 6 (lower is better)
Translates to: WEPGHRPCLRTG*RLSPRAPRRRL
Trigger: AAGACGCCTCCGAGGAGCCCGAGGAGAAAGACGCCAACCAGTGCGTAGGCAGGGCCGGTGCCCCGGCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572135.5
ENST00000574743.5
ENST00000616586.2
ENST00000632428.1
CDS CCA 72 bp ACATCGCCTGGGGCCAGCATGGAACGCAGCGTGAGGTaGGCAGGGGCAGATCCGAGGGCTGCCTCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: TSPGASMERSVR*AGADPRAASPR
Trigger: CCTGGGAGAGGCAGCCCTCGGATCTGCCCCTGCCCACCTCACGCTGCGTTCCATGCTGGCCCCAGGCGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS CCA 72 bp CTCTGTCCCACCCACCCTGTGCCTGACATGCAGCTCTaGGGTCTTTCTGCAGGGGCTGCGGGCTGGGAGCCG +
Preference number: 6 (lower is better)
Translates to: LCPTHPVPDMQL*GLSAGAAGWEP
Trigger: CGGCTCCCAGCCCGCAGCCCCTGCAGAAAGACCCCAGAGCTGCATGTCAGGCACAGGGTGGGTGGGACAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572135.5
ENST00000574743.5
ENST00000616586.2
ENST00000632428.1
CDS TCA 72 bp CACCTGCCCACTCCCTGCCCCCTAAGGGACCCACACTaGCCTGCCCAGCAGCCTGAGCTTCCTCGGGCCATA +
Preference number: 6 (lower is better)
Translates to: HLPTPCPLRDPH*PAQQPELPRAI
Trigger: TATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGGTCAGTGTGGGTCCCTTAGGGGGCAGGGAGTGGGCAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS CCA 72 bp CTGATCAGAGACTGCAGTCCCGTGAGGCTGCCGAACTaGGTGGAGGGGTACACGGCAGCGTACAGGCCCCCG +
Preference number: 6 (lower is better)
Translates to: LIRDCSPVRLPN*VEGYTAAYRPP
Trigger: CGGGGGCCTGTACGCTGCCGTGTACCCCTCCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTCTGATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS GCA 72 bp TGCTGCAGAAGGGCGAAGAGCGCGCTGATCAGAGACTaGAGTCCCGTGAGGCTGCCGAACTGGGTGGAGGGG +
Preference number: 6 (lower is better)
Translates to: CCRRAKSALIRD*SPVRLPNWVEG
Trigger: CCCCTCCACCCAGTTCGGCAGCCTCACGGGACTGCAGTCTCTGATCAGCGCGCTCTTCGCCCTTCTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS GCA 72 bp AGGGGCAGGGTGATGGCACTCCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCCATTGGTGACATTCTC +
Preference number: 6 (lower is better)
Translates to: RGRVMALLVPRL*CAAHCAIGDIL
Trigger: GAGAATGTCACCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAGGAGTGCCATCACCCTGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571376.1
ENST00000631603.1
CDS CCA 72 bp GAACTAGTCCTGGCCTGCAGCAGGACTGACATCGCCTaGGGCCAGCATGGAACGCAGCGTGAGGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: ELVLACSRTDIA*GQHGTQREVGR
Trigger: CCTGCCCACCTCACGCTGCGTTCCATGCTGGCCCCAGGCGATGTCAGTCCTGCTGCAGGCCAGGACTAGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571650.5
ENST00000612931.4
CDS CCA 72 bp GGACCAGCACTACGGACACTCCCCGGCCCTTCTCAGTaGCAAGCTGAGTGTGACTCTCGGAGGGGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: GPALRTLPGPSQ*QAECDSRRGSR
Trigger: CCGAGACCCCCTCCGAGAGTCACACTCAGCTTGCCACTGAGAAGGGCCGGGGAGTGTCCGTAGTGCTGGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000576769.1
ENST00000633495.1
CDS GCA 72 bp GCCGTTCATCCAGCTCACCTCCTCGTGCCCCGGCTCTaGTGTGCCGCCCACTGTGCCATTGGTGACATTCTC +
Preference number: 6 (lower is better)
Translates to: AVHPAHLLVPRL*CAAHCAIGDIL
Trigger: GAGAATGTCACCAATGGCACAGTGGGCGGCACAGCAGAGCCGGGGCACGAGGAGGTGAGCTGGATGAACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000572135.5
ENST00000574743.5
ENST00000575944.1
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000632084.1
ENST00000632428.1
ENST00000634102.1
CDS CCA 72 bp AGGAGCAGCCCCACGTTCACCCACAGAGGGTCTCCCTaGAGAGGACCCATCATGGCCAGAAACAGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: RSSPTFTHRGSP*RGPIMARNSGC
Trigger: GCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCCAGGGAGACCCTCTGTGGGTGAACGTGGGGCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS CAA 72 bp GCGCTGCCCAGCAGCCTGAGCTTCCTCGGGCCATACTaGTCCATGACGATACCCAGGGGCAGGGTGATGGCA +
Preference number: 6 (lower is better)
Translates to: ALPSSLSFLGPY*SMTIPRGRVMA
Trigger: TGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301335.10
ENST00000571376.1
ENST00000571650.5
ENST00000572135.5
ENST00000574743.5
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000631603.1
ENST00000632428.1
ENST00000634102.1
CDS GCA 72 bp CCCTGGAGAGGACCCATCATGGCCAGAAACAGCGGCTaGTGCAGAAGGGCGAAGAGCGCGCTGATCAGAGAC +
Preference number: 6 (lower is better)
Translates to: PWRGPIMARNSG*CRRAKSALIRD
Trigger: GTCTCTGATCAGCGCGCTCTTCGCCCTTCTGCAGCAGCCGCTGTTTCTGGCCATGATGGGTCCTCTCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS CAA 72 bp GACCTGCCCAGCAGCCTGAGCTTCCTCGGGCCATACTaGTCCATGACGATACCCAGGGGCAGGGTGATGGCA +
Preference number: 6 (lower is better)
Translates to: DLPSSLSFLGPY*SMTIPRGRVMA
Trigger: TGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS CAA 90 bp ACCCACACTGACCTGCCCAGCAGCCTGAGCTTCCTCGGGCCATACTaGTCCATGACGATACCCAGGGGCAGGGTGATGGCACTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: THTDLPSSLSFLGPY*SMTIPRGRVMALSR
Trigger: TCTGCTCAGTGCCATCACCCTGCCCCTGGGTATCGTCATGGACAAGTATGGCCCGAGGAAGCTCAGGCTGCTGGGCAGGTCAGTGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS TCA 72 bp TCGGTACTGGAGCACGGCGAGGACCACAGTACCTGCTaGTTCGGTGGCGGACGGGGTAGGAACTCCATTCTG +
Preference number: 6 (lower is better)
Translates to: SVLEHGEDHSTC*FGGGRGRNSIL
Trigger: CAGAATGGAGTTCCTACCCCGTCCGCCACCGAATCAGCAGGTACTGTGGTCCTCGCCGTGCTCCAGTACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS GCA 72 bp CTCCCCATGGTCCAGCGCCACAGCATCGGATGGGCTTaGATTTGCCTGTGGACTCCCGTAGGTCATCCTGAC +
Preference number: 6 (lower is better)
Translates to: LPMVQRHSIGWA*ICLWTPVGHPD
Trigger: GTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 72 bp GGGTACACGGCAGCGTACAGGCCCCCGACAGCGGAGTaGATGAATCCTCGCACGATTGTGTGCAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: GYTAAYRPPTAE*MNPRTIVCRMK
Trigger: CTTCATCCTGCACACAATCGTGCGAGGATTCATCCACTCCGCTGTCGGGGGCCTGTACGCTGCCGTGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000576537.1
ENST00000612931.4
ENST00000613070.4
ENST00000632441.1
ENST00000634102.1
CDS CCA 72 bp GCTGACCTCCCCATGGTCCAGCGCCACAGCATCGGATaGGCTTGCATTTGCCTGTGGACTCCCGTAGGTCAT +
Preference number: 6 (lower is better)
Translates to: ADLPMVQRHSIG*ACICLWTPVGH
Trigger: ATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCATGGGGAGGTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 72 bp CTGCTCCTGGGCATAGCCAACGAGGGAAGTGTCCTCTaGCAGGAACCACAGCTCTCCTGCTGTTGCCTTCGG +
Preference number: 6 (lower is better)
Translates to: LLLGIANEGSVL*QEPQLSCCCLR
Trigger: CCGAAGGCAACAGCAGGAGAGCTGTGGTTCCTGCCAGAGGACACTTCCCTCGTTGGCTATGCCCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576721.5
ENST00000633255.1
CDS TCA 72 bp GGCTTGCATTTGCCTGTGGACTCCCGTAGGTCATCCTaGCATCTGGGTCACTCCCCACATTCCCCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: GLHLPVDSRRSS*HLGHSPHSPSR
Trigger: GCGAGAGGGGGAATGTGGGGAGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 72 bp GAGCCCACAGTGAAGGCCAAATTTAGCATCTCGTCCTaGGCCTGGCAGCTGAGCCAGCCGTTCATCCAGCTC +
Preference number: 6 (lower is better)
Translates to: EPTVKAKFSISS*AWQLSQPFIQL
Trigger: GAGCTGGATGAACGGCTGGCTCAGCTGCCAGGCCCAGGACGAGATGCTAAATTTGGCCTTCACTGTGGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000301335.10
ENST00000571650.5
ENST00000572135.5
ENST00000574743.5
ENST00000575944.1
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000632084.1
ENST00000632428.1
ENST00000634102.1
CDS CCA 72 bp GCTGATTCGGTGGCGGACGGGGTAGGAACTCCATTCTaGAGGGCCTTCAGGGAGCTCCACAGTACACCTGAT +
Preference number: 6 (lower is better)
Translates to: ADSVADGVGTPF*RAFRELHSTPD
Trigger: ATCAGGTGTACTGTGGAGCTCCCTGAAGGCCCTCCAGAATGGAGTTCCTACCCCGTCCGCCACCGAATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS CCA 72 bp GACGACGGGGAGAGAAGTAGCAGCGTGTGCCTGAGCTaGCACATGGCAAAGCCTCACTTCACCACTGGCTTC +
Preference number: 6 (lower is better)
Translates to: DDGERSSSVCLS*HMAKPHFTTGF
Trigger: GAAGCCAGTGGTGAAGTGAGGCTTTGCCATGTGCCAGCTCAGGCACACGCTGCTACTTCTCTCCCCGTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576769.1
ENST00000633495.1
CDS CAA 90 bp AGACCGCAGTTCCGAGGCGGCAGCCACTACACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTGAGGAAGAGTTTGTCATCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RPQFRGGSHYTKASW*DEPLILRKSLSSSC
Trigger: GCAGGAGGATGACAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTAGTGGCTGCCGCCTCGGAACTGCGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 72 bp ATGGTCCAGCGCCACAGCATCGGATGGGCTTGCATTTaGCTGTGGACTCCCGTAGGTCATCCTGACATCTGG +
Preference number: 6 (lower is better)
Translates to: MVQRHSIGWACI*LWTPVGHPDIW
Trigger: CCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTGGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 72 bp ATTTGCCTGTGGACTCCCGTAGGTCATCCTGACATCTaGGTCACTCCCCACATTCCCCCTCTCGCTCACTCC +
Preference number: 6 (lower is better)
Translates to: ICLWTPVGHPDI*VTPHIPPLAHS
Trigger: GGAGTGAGCGAGAGGGGGAATGTGGGGAGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS CCA 72 bp CAGCGCCACAGCATCGGATGGGCTTGCATTTGCCTGTaGACTCCCGTAGGTCATCCTGACATCTGGGTCACT +
Preference number: 6 (lower is better)
Translates to: QRHSIGWACICL*TPVGHPDIWVT
Trigger: AGTGACCCAGATGTCAGGATGACCTACGGGAGTCCACAGGCAAATGCAAGCCCATCCGATGCTGTGGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382147.8
ENST00000412517.3
ENST00000576721.5
ENST00000633255.1
CDS TCA 72 bp AGGGGAGCAGTTGAAACGCATGCTGAGCTGAATGAGTaGGTCTCTCTAAGGGCTCCGGGAGCAGCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: RGAVETHAELNE*VSLRAPGAAGV
Trigger: CACTCCAGCTGCTCCCGGAGCCCTTAGAGAGACTCACTCATTCAGCTCAGCATGCGTTTCAACTGCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572135.5
ENST00000574743.5
ENST00000616586.2
ENST00000632428.1
CDS CCA 72 bp CAGTTCCGAGGCGGCAGCCACTACACGAAGGCCTCCTaGTTGGACGAGCCGTTGATTTTGAGGAAGAGTTTG +
Preference number: 6 (lower is better)
Translates to: QFRGGSHYTKAS*LDEPLILRKSL
Trigger: CAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTAGTGGCTGCCGCCTCGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS TCA 72 bp ATTCTGGAGGGCCTTCAGGGAGCTCCACAGTACACCTaGTATCAGGTACGACCAGGATACCCTTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: ILEGLQGAPQYT*YQVRPGYPSVG
Trigger: CCCCACAGAAGGGTATCCTGGTCGTACCTGATATCAGGTGTACTGTGGAGCTCCCTGAAGGCCCTCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575944.1
ENST00000632084.1
CDS GCA 72 bp GCGAAGGCCCGCATGGCATTAGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTTTTCTTCTCGCCTTGG +
Preference number: 6 (lower is better)
Translates to: AKARMALVIFWI*RSRFFFFFSPW
Trigger: CCAAGGCGAGAAGAAAAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCACTAATGCCATGCGGGCCTTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 72 bp GCGAAGGCCCGCATGGCATTAGTGATCTTCTGGATCTaGCGGTCCCGCTTCTTCTTTTTCTTCTCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: AKARMALVIFWI*RSRFFFFFSPL
Trigger: CAGAGGCGAGAAGAAAAAGAAGAAGCGGGACCGGCAGATCCAGAAGATCACTAATGCCATGCGGGCCTTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000576769.1
ENST00000633495.1
CDS CAA 72 bp TTCCGAGGCGGCAGCCACTACACGAAGGCCTCCTGGTaGGACGAGCCGTTGATTTTGAGGAAGAGTTTGTCA +
Preference number: 6 (lower is better)
Translates to: FRGGSHYTKASW*DEPLILRKSLS
Trigger: TGACAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTAGTGGCTGCCGCCTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS CAA 72 bp TACACGAAGGCCTCCTGGTTGGACGAGCCGTTGATTTaGAGGAAGAGTTTGTCATCCTCCTGCCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: YTKASWLDEPLI*RKSLSSSCLCC
Trigger: GCAGCAGAGGCAGGAGGATGACAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS CAA 72 bp AGCCACTACACGAAGGCCTCCTGGTTGGACGAGCCGTaGATTTTGAGGAAGAGTTTGTCATCCTCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SHYTKASWLDEP*ILRKSLSSSCL
Trigger: GAGGCAGGAGGATGACAAACTCTTCCTCAAAATCAACGGCTCGTCCAACCAGGAGGCCTTCGTGTAGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301335.10
ENST00000382147.8
ENST00000412517.3
ENST00000571650.5
ENST00000612931.4
ENST00000613070.4
ENST00000634102.1
CDS GCA 72 bp GATGAAGATGAGCACGGAGAGAGCGTTTGGTTTACTTaGTCCGTACGCAATCAGCAAGCAGGAAACCGCGAA +
Preference number: 6 (lower is better)
Translates to: DEDEHGESVWFT*SVRNQQAGNRE
Trigger: TTCGCGGTTTCCTGCTTGCTGATTGCGTACGGAGCAAGTAAACCAAACGCTCTCTCCGTGCTCATCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000301335.10
ENST00000571376.1
ENST00000571650.5
ENST00000572135.5
ENST00000572801.5
ENST00000574743.5
ENST00000612931.4
ENST00000613070.4
ENST00000616586.2
ENST00000631603.1
ENST00000632428.1
ENST00000633994.1
ENST00000634102.1