RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC41A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000114544

Ensembl transcript IDs: ENST00000315891.10, ENST00000346785.9, ENST00000360370.9, ENST00000383598.6, ENST00000504035.5, ENST00000504118.1, ENST00000505996.1, ENST00000506102.5, ENST00000507008.5, ENST00000507280.5, ENST00000508835.5, ENST00000509064.5, ENST00000509452.1, ENST00000510651.5, ENST00000512470.5, ENST00000512557.5, ENST00000513464.5, ENST00000513723.5, ENST00000514023.5, ENST00000514333.5, ENST00000514677.5, ENST00000514891.5

Found 449 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATA +
Preference number: 1 (lower is better)
Translates to: DLHDGWALLGNEDPH*GQSRKAEADQRRQI
Trigger: TATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR CCA 90 bp CAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGC +
Preference number: 1 (lower is better)
Translates to: QDDWEPAKLQDLHDG*ALLGNEDPHWGQSR
Trigger: GCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR GCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAA +
Preference number: 1 (lower is better)
Translates to: AEVCESYLSRLTKGY*RGRGQPSQGPGKGE
Trigger: TTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
3UTR GCA 90 bp ATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: IGNQPNFRIFTMGGL*LAMRTHTGVRAAKL
Trigger: CAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR TCA 90 bp ACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTaGAGACACGGAGAAAAGGCAGCCGTCTGCAAGCCAAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: TNVKRSFTSTNTGQC*RHGEKAAVCKPRRG
Trigger: GCCTCTCCTTGGCTTGCAGACGGCTGCCTTTTCTCCGTGTCTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
3UTR GCA 90 bp TGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACATaGCTCTTCTTTACCTTCTCAGGCCAGAACACCCTCCTCTCCACA +
Preference number: 1 (lower is better)
Translates to: WAWKRANTPCKAYWT*LFFTFSGQNTLLST
Trigger: TGTGGAGAGGAGGGTGTTCTGGCCTGAGAAGGTAAAGAAGAGGCATGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CCA 90 bp GTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTaGACATGCCTCTTCTTTACCTTCTCAGGCCAGAACACCCTCCTC +
Preference number: 1 (lower is better)
Translates to: VAWAWKRANTPCKAY*TCLFFTFSGQNTLL
Trigger: GAGGAGGGTGTTCTGGCCTGAGAAGGTAAAGAAGAGGCATGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR TCA 90 bp CAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTaGATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAA +
Preference number: 1 (lower is better)
Translates to: QRQGSTIPRTWQGRN*ILYPTDVRGNSNEQ
Trigger: TTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
3UTR GCA 90 bp CTTCTCAGGCCAGAACACCCTCCTCTCCACAAACGTGTGCACACTTaGACGCTCATTAAGCATGTGCACACATCATATTCACACACTCAA +
Preference number: 1 (lower is better)
Translates to: LLRPEHPPLHKRVHT*TLIKHVHTSYSHTQ
Trigger: TTGAGTGTGTGAATATGATGTGTGCACATGCTTAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAGGAGGGTGTTCTGGCCTGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR GCA 90 bp TTCTTTACCTTCTCAGGCCAGAACACCCTCCTCTCCACAAACGTGTaGACACTTGCACGCTCATTAAGCATGTGCACACATCATATTCAC +
Preference number: 1 (lower is better)
Translates to: FFTFSGQNTLLSTNV*TLARSLSMCTHHIH
Trigger: GTGAATATGATGTGTGCACATGCTTAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAGGAGGGTGTTCTGGCCTGAGAAGGTAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CAA 90 bp GGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GNQPNFRIFTMGGLC*AMRTHTGVRAAKLR
Trigger: CCTCAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR-3UTR CCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGTGGGTTGCATGGGCATaGAAAAGAGCAAACACACCC +
Preference number: 2 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTWVAWA*KRANTP
Trigger: GGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR TCA 90 bp CAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGTCAGAGCCGCAAAGCTaGGGCAGACCAGCGGCGTCA +
Preference number: 2 (lower is better)
Translates to: QDDWEPAKLQDLHDGWALSEPQS*GRPAAS
Trigger: TGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGA...CAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR-3UTR TCA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGATGGCAAGGGAGAAACTaGATTCTGTATCCCACTGAT +
Preference number: 2 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGWQGRN*ILYPTD
Trigger: ATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCA...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR TCA 90 bp CCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTTGGCAAGGGAGAAACTaGATTCTGTATCCCACTGAT +
Preference number: 2 (lower is better)
Translates to: PGEAVHLLGTAAVWPTELWQGRN*ILYPTD
Trigger: ATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCA...AAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR GCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGAAACGTGTGCACACTTaGACGCTCATTAAGCATGTG +
Preference number: 2 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEKRVHT*TLIKHV
Trigger: CACATGCTTAATGAGCGTGCAAGTGTGCACACGTTT...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CCA 90 bp AGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTGTGTCTCGTGGCAATGTTGTCTaGGTTGACCCCGAGCTTTCG +
Preference number: 2 (lower is better)
Translates to: SRKAEADQRRQIPTIFVSRGNVV*VDPELS
Trigger: CGAAAGCTCGGGGTCAACCCAGACAACATTGCCACG...AGACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR-3UTR CCA 90 bp ATGGCCAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCCAGGCTGGCTGCAATaGGCGTGGCAATGTTGTCTG +
Preference number: 2 (lower is better)
Translates to: MARMIGNQPNFRIFTMGGPGWLQ*AWQCCL
Trigger: CAGACAACATTGCCACGCCCATTGCAGCCAGCCTGG...CCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR CAA 90 bp AGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTaGAACCTGGTGAAGACAGCAAGTAAGCCACAGCTCAAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: RLYTFLAQQQCGPRS*NLVKTASKPQLKSS
Trigger: AGAACTCTTGAGCTGTGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR TCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGTGTATCCCACTGATGTaGGAGGAAATTCTAATGAGC +
Preference number: 2 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLCIPLM*EEILMS
Trigger: GCTCATTAGAATTTCCTCTCACATCAGTGGGATACA...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR TCA 90 bp AACTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTCAATGTTGTCTGGGTTaGCCCCGAGCTTTCGAGCAC +
Preference number: 2 (lower is better)
Translates to: NFRIFTMGGLCLAMRTHTQCCLG*PRAFEH
Trigger: GTGCTCGAAAGCTCGGGGTCAACCCAGACAACATTG...AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR-3UTR GCA 90 bp CGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGGAAAAGGCAGCCGTCTaGAAGCCAAGGAGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: RHQCQKVFHLHKHRPVLKEKAAV*KPRRGH
Trigger: GTGGCCTCTCCTTGGCTTGCAGACGGCTGCCTTTTC...CTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
3UTR-3UTR CCA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCATGGGTTGCATGGGCATaGAAAAGAGCAAACACACCC +
Preference number: 2 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPWVAWA*KRANTP
Trigger: GGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR GCA 90 bp TCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCA +
Preference number: 2 (lower is better)
Translates to: SGLHGHGKEQTHPAKHTGLTKGY*RGRGQP
Trigger: TGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAG...TCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CAA 90 bp ATCATATTCACACACTCAAGCCATGCTCTTGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: IIFTHSSHALDFRAL*QAQVSTPEPRCVRA
Trigger: AGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGTGTGTGAATATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR TCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCATGGCAAGGGAGAAACTaGATTCTGTATCCCACTGAT +
Preference number: 2 (lower is better)
Translates to: PRCVRATLADSQKATAEAWQGRN*ILYPTD
Trigger: ATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCA...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
3UTR-3UTR TCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCATGTATCCCACTGATGTaGGAGGAAATTCTAATGAGC +
Preference number: 2 (lower is better)
Translates to: PRCVRATLADSQKATAEACIPLM*EEILMS
Trigger: GCTCATTAGAATTTCCTCTCACATCAGTGGGATACA...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
3UTR-3UTR GCA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCAGAGCAAACACACCCTaGAAAGCATACTGGACATGC +
Preference number: 2 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELRANTP*KAYWTC
Trigger: GCATGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCT...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR GCA 90 bp TCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGAAAACGTGTGCACACTTaGACGCTCATTAAGCATGTG +
Preference number: 2 (lower is better)
Translates to: SGLHGHGKEQTHPAKHTGKRVHT*TLIKHV
Trigger: CACATGCTTAATGAGCGTGCAAGTGTGCACACGTTT...TCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CCA 72 bp GATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCTGAGGCAGACCAGCGG +
Preference number: 3 (lower is better)
Translates to: DGWALLGNEDPH*GQSRKAEADQR
Trigger: CCGCTGGTCTGCCTCAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR CCA 72 bp GGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTaGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAG +
Preference number: 3 (lower is better)
Translates to: GEAVHLLGTAAV*PTELEPGEDSK
Trigger: CTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CAA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACC +
Preference number: 3 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEDFRAL*QAQVST
Trigger: GGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATC...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR GCA 72 bp CAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCACACTGGGGTCAGAGCC +
Preference number: 3 (lower is better)
Translates to: QPNFRIFTMGGL*LAMRTHTGVRA
Trigger: GGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR-3UTR CAA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAACTCAAGCCATGCTCTaGATTTCAGGGCTCTATTGC +
Preference number: 3 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGTQAML*ISGLYC
Trigger: GCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGT...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CAA 90 bp CTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGCAATGTTGTCTGGGTaGACCCCGAGCTTTCGAGCA +
Preference number: 3 (lower is better)
Translates to: LQDLHDGWALLGNEDPHWAMLSG*TPSFRA
Trigger: TGCTCGAAAGCTCGGGGTCAACCCAGACAACATTGC...CCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR CCA 72 bp TGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAGGACCCACACTGGGGT +
Preference number: 3 (lower is better)
Translates to: WEPAKLQDLHDG*ALLGNEDPHWG
Trigger: ACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR GCA 72 bp TGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCATCCCAAGGACCTGGC +
Preference number: 3 (lower is better)
Translates to: CESYLSRLTKGY*RGRGQPSQGPG
Trigger: GCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
3UTR CCA 72 bp TTGAGTGCAGATGAAGGGTTGTATGAGGCCCCATCCTaGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: LSADEGLYEAPS*GGCTPSWHSSS
Trigger: ACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGGCCTCATACAACCCTTCATCTGCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR GCA 72 bp CACACTCAAGCCATGCTCTTGATTTCAGGGCTCTATTaGAGGCTCAGGTATCAACCCCAGAGCCGAGGTGTG +
Preference number: 3 (lower is better)
Translates to: HTQAMLLISGLY*RLRYQPQSRGV
Trigger: CACACCTCGGCTCTGGGGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CCA 72 bp CCTTCCTGCTCCACCCCAATCTGGGTTGCATGGGCATaGAAAAGAGCAAACACACCCTGCAAAGCATACTGG +
Preference number: 3 (lower is better)
Translates to: PSCSTPIWVAWA*KRANTPCKAYW
Trigger: CCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CCA 72 bp AGAGCTCCTTCCTGCTCCACCCCAATCTGGGTTGCATaGGCATGGAAAAGAGCAAACACACCCTGCAAAGCA +
Preference number: 3 (lower is better)
Translates to: RAPSCSTPIWVA*AWKRANTPCKA
Trigger: TGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGGAAGGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CAA 90 bp AGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCAATGCTGCCAACACCTaGATCTTGGACTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: RGGTNVKRSFTSTNTGQCNAANT*ILDFQP
Trigger: AGGCTGGAAGTCCAAGATCAAGGTGTTGGCAGCATT...GCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
3UTR TCA 72 bp AAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTaGAGACACGGAGAAAAGGCAGCCGTCTGCAAGCCA +
Preference number: 3 (lower is better)
Translates to: KRSFTSTNTGQC*RHGEKAAVCKP
Trigger: TGGCTTGCAGACGGCTGCCTTTTCTCCGTGTCTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
3UTR GCA 72 bp AGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTaGTCCACCCCAATCTGGGTTGCATGGGCATGGAAA +
Preference number: 3 (lower is better)
Translates to: SSEAWEQKRAPS*STPIWVAWAWK
Trigger: TTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR GCA 72 bp TTCTCAGGCCAGAACACCCTCCTCTCCACAAACGTGTaGACACTTGCACGCTCATTAAGCATGTGCACACAT +
Preference number: 3 (lower is better)
Translates to: FSGQNTLLSTNV*TLARSLSMCTH
Trigger: ATGTGTGCACATGCTTAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAGGAGGGTGTTCTGGCCTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CAA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACC +
Preference number: 3 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELDFRAL*QAQVST
Trigger: GGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATC...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR-3UTR CAA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGACCACCCCAATCTGGGTaGCATGGGCATGGAAAAGAG +
Preference number: 3 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRPPQSG*HGHGKE
Trigger: CTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGG...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR TCA 72 bp GGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTaGATTCTGTATCCCACTGATGTGAGAGGAAATTCT +
Preference number: 3 (lower is better)
Translates to: GSTIPRTWQGRN*ILYPTDVRGNS
Trigger: AGAATTTCCTCTCACATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGGCTCTCAGGGGCCCTaGGAGCTCCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTGSQGP*ELHLLR
Trigger: CCTCAGAAGATGGAGCTCTCAGGGCCCCTGAGAGCC...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR GCA 90 bp CCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTCTGTCCAGCCTCCGCTaGCGGGTCTCTGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PGEAVHLLGTAAVWPTELLSSLR*RVSVPS
Trigger: GGATGGGACAGAGACCCGGCAGCGGAGGCTGGACAG...AAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR GCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGTCACCAGGTGCCCTGTaGCTGCAGAGAGTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTSPGAL*LQRVPQ
Trigger: TTGGGGAACTCTCTGCAGGCACAGGGCACCTGGTGA...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGACAGTGGCCTGCACCTaGATGAGGGCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLTVACT*MRARLL
Trigger: CAGCAACCTGGCCCTCATCCAGGTGCAGGCCACTGT...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGACAGTGGCCTGCACCTaGATGAGGGCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGLCLAMRTHTGVRAAKLTVACT*MRARLL
Trigger: CAGCAACCTGGCCCTCATCCAGGTGCAGGCCACTGT...CAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGCCAGGCTGGCTGCAATaGGCGTGGCAATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTPGWLQ*AWQCCL
Trigger: CAGACAACATTGCCACGCCCATTGCAGCCAGCCTGG...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCACGAAGTCAGAGCCTaGGGTGCTCCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEHEVRA*GAPVLS
Trigger: GGAGAGGACTGGAGCACCCCAGGCTCTGACTTCGTG...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR TCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCCAGATTCAGCTGGGTaGCCACCATGGCCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEPDSAG*PPWPGN
Trigger: ATTGCCTGGCCATGGTGGTCACCCAGCTGAATCTGG...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGGTCTCCCAGGCTGGCTaGAATGGGCGTGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEVSQAG*NGRGNV
Trigger: AACATTGCCACGCCCATTGCAGCCAGCCTGGGAGAC...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGTMGGL*LAMRTH
Trigger: GTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGT...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGCCAGGCTGGCTGCAATaGGCGTGGCAATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GGLCLAMRTHTGVRAAKLPGWLQ*AWQCCL
Trigger: CAGACAACATTGCCACGCCCATTGCAGCCAGCCTGG...CAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCAATGTTGTCTGGGTTaGCCCCGAGCTTTCGAGCAC +
Preference number: 4 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTEQCCLG*PRAFEH
Trigger: GTGCTCGAAAGCTCGGGGTCAACCCAGACAACATTG...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGCAATGTTGTCTGGGTTaGCCCCGAGCTTTCGAGCAC +
Preference number: 4 (lower is better)
Translates to: GGLCLAMRTHTGVRAAKLQCCLG*PRAFEH
Trigger: GTGCTCGAAAGCTCGGGGTCAACCCAGACAACATTG...CAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp GGTCAGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTTCAGAGCCGCAAAGCTaGGGCAGACCAGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: GQSRKAEADQRRQIPTIFSEPQS*GRPAAS
Trigger: TGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGA...AAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGGCTCTGCTTGGCAATaGGGACCCACACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETGSAWQ*GPTLGS
Trigger: TGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCC...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTCCAGCTCCCCTGGCTTaGCACAGCTGTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPPAPLA*HSCPAS
Trigger: GGAGGCTGGACAGCTGTGGCAAGCCAGGGGAGCTGG...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR GCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTCCCACGACAGTGGCCTaGACCTGGATGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSPTTVA*TWMRAR
Trigger: CCTGGCCCTCATCCAGGTGCAGGCCACTGTCGTGGG...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGTCATTACAGAGACTCTaGCAGGCCCTGCTGTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLSLQRL*QALLSL
Trigger: GAGGGACAGCAGGGCCTGGCAGAGTCTCTGTAATGA...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTAGTCAGAGCCTGGGGTaGTCCAGTCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETSQSLG*SSPLLL
Trigger: CAGGAGGAGAGGACTGGAGCACCCCAGGCTCTGACT...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp CCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTCGTGGCAATGTTGTCTaGGTTGACCCCGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: PGEAVHLLGTAAVWPTELRGNVV*VDPELS
Trigger: CGAAAGCTCGGGGTCAACCCAGACAACATTGCCACG...AAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGTCAGGATCTTCACGATaGGTGGGCTCTGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTSGSSR*VGSAWQ
Trigger: TTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGA...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGCAGAATTTCTTCATCTaGAGGGGCAGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTQNFFI*RGRTPG
Trigger: ACCTGGCGTCCTGCCCCTCCAGATGAAGAAATTCTG...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGCTGCAGTGGGCGCCCTaGCTAAAACCAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GGLCLAMRTHTGVRAAKLLQWAP*LKPSSV
Trigger: AACAGAGCTTGGTTTTAGCCAGGGCGCCCACTGCAG...CAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp CAAACACAGGCCAGTGCTGAAGACACGGAGAAAAGGCAGCCGTCTGCAAGCCAAGGCTCTCAGGGGCCCTaGGAGCTCCATCTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QTQASAEDTEKRQPSASQGSQGP*ELHLLR
Trigger: CCTCAGAAGATGGAGCTCTCAGGGCCCCTGAGAGCC...TTGGCTTGCAGACGGCTGCCTTTTCTCCGTGTCTTCAGCACTGGCCTGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR TCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTCCAGGCCTGCAAACATaGAGGGCACGGTCACCTGAA +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETPGLQT*RARSPE
Trigger: TTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGG...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR TCA 90 bp CTGATGACCATGGCCAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGCAGAGGTCTCCAGCGTaGCTGCAGTGGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LMTMARMIGNQPNFRIFTQRSPA*LQWAPW
Trigger: CCAGGGCGCCCACTGCAGTCACGCTGGAGACCTCTG...CGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATGGTCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGACAGAGGTCTCCAGCGTaGCTGCAGTGGGCGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRQRSPA*LQWAPW
Trigger: CCAGGGCGCCCACTGCAGTCACGCTGGAGACCTCTG...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCCACGACAGTGGCCTaGACCTGGATGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIPTTVA*TWMRAR
Trigger: CCTGGCCCTCATCCAGGTGCAGGCCACTGTCGTGGG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACCCCACGACAGTGGCCTaGACCTGGATGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHPTTVA*TWMRAR
Trigger: CCTGGCCCTCATCCAGGTGCAGGCCACTGTCGTGGG...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLTMGGL*LAMRTH
Trigger: GTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGT...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTCTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: PGEAVHLLGTAAVWPTELLTKGY*RGRGQP
Trigger: TGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAG...AAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGCAGCTGTGGAGAGTCTaGATGCCAGTGTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLQLWRV*MPVSSP
Trigger: TGGAGATGACACTGGCATCCAGACTCTCCACAGCTG...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGCCAGGCTGGCTGCAATaGGCGTGGCAATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLPGWLQ*AWQCCL
Trigger: CAGACAACATTGCCACGCCCATTGCAGCCAGCCTGG...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTCCAGGCTGGCTGCAATaGGCGTGGCAATGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETPGWLQ*AWQCCL
Trigger: CAGACAACATTGCCACGCCCATTGCAGCCAGCCTGG...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGGCTGTACACCTTCTTaGCACAGCAGCAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETGCTPS*HSSSVA
Trigger: GGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCC...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGTGCTCCACCCCAATCTaGGTTGCATGGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLCSTPI*VAWAWK
Trigger: TTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCA...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCAAGCCGGACAGCAGAATaGGCACCACGACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPSRTAE*APRPGT
Trigger: TGTGCCAGGTCGTGGTGCCCATTCTGCTGTCCGGCT...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR TCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGTCAGAGCCGCAAAGCTaGGGCAGACCAGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAESEPQS*GRPAAS
Trigger: TGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGA...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGATCAGTAGCCAGTCAGTaGAAAAGCAGAGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGSVASQ*KSRVPG
Trigger: TCCTGGCACTCTGCTTTTTCACTGACTGGCTACTGA...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGCTGTCCAGCCTCCGCTaGCGGGTCTCTGTCCCATCC +
Preference number: 4 (lower is better)
Translates to: RHQCQKVFHLHKHRPVLKLSSLR*RVSVPS
Trigger: GGATGGGACAGAGACCCGGCAGCGGAGGCTGGACAG...CTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR GCA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGTGTGGAGAGTCTGGATaGCAGTGTCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTECGESG*QCHLQV
Trigger: AACCTGGAGATGACACTGGCATCCAGACTCTCCACA...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCCCCAGGGCAAAGGCTaGAAGGAAGGCAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFPQGKG*KEGSED
Trigger: GTCCTCACTGCCTTCCTTGCAGCCTTTGCCCTGGGG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCGGGCAGGACGCCAGGTaGACTCCACATGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFGQDAR*TPHVQV
Trigger: TACCTGCACATGTGGAGTGCACCTGGCGTCCTGCCC...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCCACCTGGATCAGGCCTaGCAGCAGGTAGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGHLDQA*QQVEHH
Trigger: GTGGTGCTCTACCTGCTGGCAGGCCTGATCCAGGTG...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGATGCCAGTTCTGAGATaGCACCCAGCTCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLMPVLR*HPALPC
Trigger: GCAAGGCAGAGCTGGGTGGCATCTCAGAACTGGCAT...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCGACTCTGCCAGGCCCTaGTGTCCCTCCCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIDSARP*CPSLKV
Trigger: GACCTTCAGGGAGGGACAGCAGGGCCTGGCAGAGTC...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp AGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTGTGTCCAGTCTCGCCCATCTaGACCAGAGGTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: RAAKLRQTSGVRYRLSLCPVSPI*TRGLQR
Trigger: ACGCTGGAGACCTCTGGTGCAGATGGGCGAGACTGG...ACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp CCACCAGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCTCACCTGAAGGCCTATaGACCAGGTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPGAAPMSKGLSPPQTQASPEGL*TRWSPC
Trigger: GCAGGGAGACCACCTGGTCCATAGGCCTTCAGGTGA...GGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR CCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGCAGTGTTGGCAGCTGTaGAGAGTCTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLQCWQL*RVWMPV
Trigger: CACTGGCATCCAGACTCTCCACAGCTGCCAACACTG...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCACAGTGGCCTGCACCTaGATGAGGGCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGTVACT*MRARLL
Trigger: CAGCAACCTGGCCCTCATCCAGGTGCAGGCCACTGT...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTCGTGGCAATGTTGTCTaGGTTGACCCCGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETRGNVV*VDPELS
Trigger: CGAAAGCTCGGGGTCAACCCAGACAACATTGCCACG...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETNEDPH*GQSRKA
Trigger: AGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATT...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGATTCTAATGAGCAAATaGGACCAGCGGGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLILMSK*DQRGPV
Trigger: AACTGGGCCCCGCTGGTCCCATTTGCTCATTAGAAT...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGGCACAGCAGCAGTGTaGCCCACGGAGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPGTAAV*PTELEP
Trigger: AGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCC...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGCAGGCCAGTGTTGAATaGTGTTCATCACCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLQASVE*CSSPGR
Trigger: CCGGCCTGGTGATGAACACCATTCAACACTGGCCTG...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
3UTR CAA 72 bp CCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACTGGGGTCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: PNFRIFTMGGLC*AMRTHTGVRAA
Trigger: TGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGAGAGCTCCATCTTCTaGGGCTACAGGGAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPESSIF*GYRESS
Trigger: GGAGGACTCCCTGTAGCCTCAGAAGATGGAGCTCTC...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR TCA 90 bp AAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTCAGAGCCGCAAAGCTaGGGCAGACCAGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KPQLKSSEAWEQKRAPSCSEPQS*GRPAAS
Trigger: TGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGA...GCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGATCAGAGCCGCAAAGCTaGGGCAGACCAGCGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRSEPQS*GRPAAS
Trigger: TGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGA...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp AAACTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACGGCTCTGCTTGGCAATaGGGACCCACACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KLQDLHDGWALLGNEDPHGSAWQ*GPTLGS
Trigger: TGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCC...GTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTGACATGGAATTaGTTTCTGACGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTELTWN*FLTCRK
Trigger: CTTTCTGCACGTCAGAAATCAATTCCATGTCAGCTC...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAGGTCTGGCTGTTTATaGCTGACTGACCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLRSGCL*LTDPPP
Trigger: TGGTGGAGGGTCAGTCAGTCATAAACAGCCAGACCT...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGGAACAAAGGCCAGTGTaGCTCACGGCCTCATTACAG +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLEQRPV*LTASLQ
Trigger: CTGTAATGAGGCCGTGAGTCACACTGGCCTTTGTTC...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR TCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACAACAGCCCCTCGGCTaGGGGCCAGCACAGATGAGT +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPQQPLG*GPAQMS
Trigger: ACTCATCTGTGCTGGCCCTCAGCCGAGGGGCTGTTG...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp GCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGACCCAGCTCCCCTGGCTTaGCACAGCTGTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: APMSKGLSPPQTQASAEDPAPLA*HSCPAS
Trigger: GGAGGCTGGACAGCTGTGGCAAGCCAGGGGAGCTGG...GTCTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR GCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACCCCCAGGGCAAAGGCTaGAAGGAAGGCAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHPQGKG*KEGSED
Trigger: GTCCTCACTGCCTTCCTTGCAGCCTTTGCCCTGGGG...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCGTCTCCCAGGCTGGCTaGAATGGGCGTGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGVSQAG*NGRGNV
Trigger: AACATTGCCACGCCCATTGCAGCCAGCCTGGGAGAC...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp AGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTGTGTCTACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: SRKAEADQRRQIPTIFVSTMGGL*LAMRTH
Trigger: GTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGT...AGACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCACCTGGATCAGGCCTaGCAGCAGGTAGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIHLDQA*QQVEHH
Trigger: GTGGTGCTCTACCTGCTGGCAGGCCTGATCCAGGTG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTAGGATCCAGGGCCTGGTaGCAAGTCAGCCGAACCATC +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVGSRAW*QVSRTI
Trigger: GATGGTTCGGCTGACTTGGCACCAGGCCCTGGATCC...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAGGATCCAGGGCCTGGTaGCAAGTCAGCCGAACCATC +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEAGSRAW*QVSRTI
Trigger: GATGGTTCGGCTGACTTGGCACCAGGCCCTGGATCC...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTCTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETLTKGY*RGRGQP
Trigger: TGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAG...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGAGAGCAAACACACCCTaGAAAGCATACTGGACATGC +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLRANTP*KAYWTC
Trigger: GCATGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCT...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGCACCCCAATCTGGGTTaGATGGGCATGGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLHPNLG*MGMEKS
Trigger: GCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTG...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCACCATGGCCAGGCAATaGACCACGATCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFTMARQ*TTIPGA
Trigger: TGCTCCTGGGATCGTGGTGCATTGCCTGGCCATGGT...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAGTCTCGCCCATCTaGACCAGAGGTCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIPVSPI*TRGLQR
Trigger: ACGCTGGAGACCTCTGGTGCAGATGGGCGAGACTGG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR GCA 90 bp CAAACACAGGCCAGTGCTGAAGACACGGAGAAAAGGCAGCCGTCTGCAAGCCAAGAAAAGGCAGCCGTCTaGAAGCCAAGGAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QTQASAEDTEKRQPSASQEKAAV*KPRRGH
Trigger: GTGGCCTCTCCTTGGCTTGCAGACGGCTGCCTTTTC...TTGGCTTGCAGACGGCTGCCTTTTCTCCGTGTCTTCAGCACTGGCCTGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCAGTCTCCAGTGGCTTaGGGGTCACGCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFQSPVA*GSRFGS
Trigger: AGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CCA 90 bp TCAGGCCCACCAGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGTCTCCAGTGGCTTaGGGGTCACGCTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGPPGAAPMSKGLSPPQTQSPVA*GSRFGS
Trigger: AGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTG...TGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR CCA 90 bp CTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGCAGTGTTGGCAGCTGTaGAGAGTCTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LQDLHDGWALLGNEDPHWQCWQL*RVWMPV
Trigger: CACTGGCATCCAGACTCTCCACAGCTGCCAACACTG...CCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTAACAGTGGCCTGCACCTaGATGAGGGCCAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVTVACT*MRARLL
Trigger: CAGCAACCTGGCCCTCATCCAGGTGCAGGCCACTGT...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGACAGCAACTCCACCTTaGCGACATCCACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLTATPP*RHPLPL
Trigger: GAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGT...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGTCAGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTCGTGGCAATGTTGTCTaGGTTGACCCCGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GQSRKAEADQRRQIPTIFRGNVV*VDPELS
Trigger: CGAAAGCTCGGGGTCAACCCAGACAACATTGCCACG...AAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAAAATCAGATGGCCTaGGACCACCAGCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETENQMA*DHQQEQ
Trigger: CTGCTCTTGCTGGTGGTCCCAGGCCATCTGATTTTC...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGACCAATCTGGGTTGCATaGGCATGGAAAAGAGCAAAC +
Preference number: 4 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGPIWVA*AWKRAN
Trigger: GTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGG...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGAGGCAGACAAAGGGGAAGAAAGCTaGAAAGCTGGGTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LLGNEDPHWGQSRKAEADKGEES*KAGSSL
Trigger: GAGACTGGACCCAGCTTTCCAGCTTTCTTCCCCTTT...GTCTGCCTCAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp TTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGACCATCAGCACCCCTTaGCGACATCCACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FRIFTMGGLCLAMRTHTGTISTP*RHPLPL
Trigger: GAGAGGAAGTGGATGTCGCCAAGGGGTGCTGATGGT...CCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
3UTR CAA 72 bp ACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTaGAACCTGGTGAAGACAGCAAGTAAGCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: TFLAQQQCGPRS*NLVKTASKPQL
Trigger: GAGCTGTGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAGGCTCTGCTTGGCAATaGGGACCCACACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPGSAWQ*GPTLGS
Trigger: TGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCC...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTTCAGTAGCCAGTCAGTaGAAAAGCAGAGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETSVASQ*KSRVPG
Trigger: TCCTGGCACTCTGCTTTTTCACTGACTGGCTACTGA...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACGAGGGCCAGCACAGATaGGTGAGGAACAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHEGQHR*VRNKGQ
Trigger: CTGGCCTTTGTTCCTCACTCATCTGTGCTGGCCCTC...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp TTCAGGCCCACCAGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACAATAGTCCAGAAGCATaGCGGCCCAGGACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FRPTRGGTNVKRSFTSTNNSPEA*RPRTVP
Trigger: TGGGACTGTCCTGGGCCGGCATGCTTCTGGACTATT...GTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGGGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR GCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTCTGCTGATGACTCTGTaGTGCTCCTGGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPLLMTL*CSWGSS
Trigger: TGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAG...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCCAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCCTGCTGATGACTCTGTaGTGCTCCTGGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: ARMIGNQPNFRIFTMGGLLLMTL*CSWGSS
Trigger: TGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAG...GAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp GTGTCTGTAGAAGAAGCTGCTAACCAAAGCCAGAATGGACAGTGTGATGAGGTCCCCACGACAGTGGCCTaGACCTGGATGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VSVEEAANQSQNGQCDEVPTTVA*TWMRAR
Trigger: CCTGGCCCTCATCCAGGTGCAGGCCACTGTCGTGGG...GACCTCATCACACTGTCCATTCTGGCTTTGGTTAGCAGCTTCTTCTACAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp CAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGGTCTCCCAGGCTGGCTaGAATGGGCGTGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: QDDWEPAKLQDLHDGWALVSQAG*NGRGNV
Trigger: AACATTGCCACGCCCATTGCAGCCAGCCTGGGAGAC...CAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGCCATGCCTTTGTACTaGTGTTTAGAAACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTAMPLY*CLETVL
Trigger: CAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGC...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGGCAGGACGCCAGGTaGACTCCACATGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRGQDAR*TPHVQV
Trigger: TACCTGCACATGTGGAGTGCACCTGGCGTCCTGCCC...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTCACCTGGATCAGGCCTaGCAGCAGGTAGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPAHLDQA*QQVEHH
Trigger: GTGGTGCTCTACCTGCTGGCAGGCCTGATCCAGGTG...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAGGCCGGCTGTCATCATaGACAAGCCGGACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTGRLSS*TSRTAE
Trigger: TTCTGCTGTCCGGCTTGTGCATGATGACAGCCGGCC...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTTTGGGGGTCACGCTTTaGCTCTCAGGGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPALGVTL*LSGALR
Trigger: TCTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAA...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCAGGCTCAGTCTCCAGTaGCTTGGGGGTCACGCTTTG +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIRLSLQ*LGGHAL
Trigger: CAAAGCGTGACCCCCAAGCCACTGGAGACTGAGCCT...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTACTCTGTGCTGCTCCTaGGGGTCATCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETTLCCS*GSSICP
Trigger: TGGACAAATTGATGACCCCCAGGAGCAGCACAGAGT...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGNEDPH*GQSRKA
Trigger: AGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATT...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTCATGGCCAGGATGATTaGGAACCAGCCAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETHGQDD*EPAKLQ
Trigger: CTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATG...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAAGCAGGATTGTCACCTaGATCAGGCCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEASRIVT*IRPASR
Trigger: CCTGCTGGCAGGCCTGATCCAGGTGACAATCCTGCT...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAGGCTGTACACCTTCTTaGCACAGCAGCAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEAGCTPS*HSSSVA
Trigger: GGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCC...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTGAAGAGTTCTGAGGCTTaGGAACAGAAAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGRLYTFLAQQQCGPRSLKSSEA*EQKRAP
Trigger: AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTT...CAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTGGCACAGCAGCAGTGTaGCCCACGGAGCTTGAACCT +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPAGTAAV*PTELEP
Trigger: AGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCC...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCCAGTCCTCTCCTCCTaGCCCACACCAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELPVLSS*PTPGRC
Trigger: ACAGCGTCCTGGTGTGGGCCAGGAGGAGAGGACTGG...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR TCA 90 bp CGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGGAGAGCTCCATCTTCTaGGGCTACAGGGAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RHQCQKVFHLHKHRPVLKESSIF*GYRESS
Trigger: GGAGGACTCCCTGTAGCCTCAGAAGATGGAGCTCTC...CTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR TCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACACAATGTTGTCTGGGTTaGCCCCGAGCTTTCGAGCAC +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTQCCLG*PRAFEH
Trigger: GTGCTCGAAAGCTCGGGGTCAACCCAGACAACATTG...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCAATGTTGTCTGGGTTaGCCCCGAGCTTTCGAGCAC +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIQCCLG*PRAFEH
Trigger: GTGCTCGAAAGCTCGGGGTCAACCCAGACAACATTG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCGGCTCTGCTTGGCAATaGGGACCCACACTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELGSAWQ*GPTLGS
Trigger: TGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCC...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCAGGTCTGGCTGTTTATaGCTGACTGACCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFRSGCL*LTDPPP
Trigger: TGGTGGAGGGTCAGTCAGTCATAAACAGCCAGACCT...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAATAGTCCAGAAGCATaGCGGCCCAGGACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTNSPEA*RPRTVP
Trigger: TGGGACTGTCCTGGGCCGGCATGCTTCTGGACTATT...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR GCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGCTGCTGATGACTCTGTaGTGCTCCTGGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAELLMTL*CSWGSS
Trigger: TGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAG...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGTCTCCCAGGCTGGCTaGAATGGGCGTGGCAATGTT +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRVSQAG*NGRGNV
Trigger: AACATTGCCACGCCCATTGCAGCCAGCCTGGGAGAC...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp TCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGAGGATCCAGGGCCTGGTaGCAAGTCAGCCGAACCATC +
Preference number: 4 (lower is better)
Translates to: SGLHGHGKEQTHPAKHTGGSRAW*QVSRTI
Trigger: GATGGTTCGGCTGACTTGGCACCAGGCCCTGGATCC...TCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTACACCCAGCTCTGCCTTaGTCTTCAGTAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVHPALP*SSVASQ
Trigger: CTGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTG...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GGGCTCTGCTTGGCAATGAGGACCCACACTGGGGTCAGAGCCGCAAAGCTGAGGACAAACACAGGCCAGTaGTTACACTTTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GLCLAMRTHTGVRAAKLRTNTGQ*LHFQEN
Trigger: ATTCTCCTGAAAGTGTAAGCACTGGCCTGTGTTTGT...CCTCAGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp TGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGACACGGAGATTGGGGGTCACGCTTTaGCTCTCAGGGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: CQKVFHLHKHRPVLKTRRLGVTL*LSGALR
Trigger: TCTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAA...TCTCCGTGTCTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR CCA 90 bp AAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTCACCTGAAGGCCTATaGACCAGGTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KPQLKSSEAWEQKRAPSCSPEGL*TRWSPC
Trigger: GCAGGGAGACCACCTGGTCCATAGGCCTTCAGGTGA...GCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCAGCTGTGGAGAGTCTaGATGCCAGTGTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFQLWRV*MPVSSP
Trigger: TGGAGATGACACTGGCATCCAGACTCTCCACAGCTG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCAGTGTTGGCAGCTGTaGAGAGTCTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIQCWQL*RVWMPV
Trigger: CACTGGCATCCAGACTCTCCACAGCTGCCAACACTG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGTCAGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTACTCTGTGCTGCTCCTaGGGGTCATCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQSRKAEADQRRQIPTIFTLCCS*GSSICP
Trigger: TGGACAAATTGATGACCCCCAGGAGCAGCACAGAGT...AAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp CAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QDDWEPAKLQDLHDGWALNEDPH*GQSRKA
Trigger: AGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATT...CAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGAATGAGGACCCACACTaGGGTCAGAGCCGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAENEDPH*GQSRKA
Trigger: AGCTTTGCGGCTCTGACCCCAGTGTGGGTCCTCATT...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp AGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTGTGTCTGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: SRKAEADQRRQIPTIFVSDLHDG*ALLGNE
Trigger: CTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATC...AGACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSDLHDG*ALLGNE
Trigger: CTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATC...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp AGAGCCGCAAAGCTGAGGCAGACCAGCGGCGTCAGATACCGACTATCTTTGTGTTCAGGATCTTCACGATaGGTGGGCTCTGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAAKLRQTSGVRYRLSLCSGSSR*VGSAWQ
Trigger: TTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGA...ACACAAAGATAGTCGGTATCTGACGCCGCTGGTCTGCCTCAGCTTTGCGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCCAGAATTTCTTCATCTaGAGGGGCAGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGQNFFI*RGRTPG
Trigger: ACCTGGCGTCCTGCCCCTCCAGATGAAGAAATTCTG...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCGAAAATCAGATGGCCTaGGACCACCAGCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFENQMA*DHQQEQ
Trigger: CTGCTCTTGCTGGTGGTCCCAGGCCATCTGATTTTC...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAAGCAGGATTGTCACCTaGATCAGGCCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPSRIVT*IRPASR
Trigger: CCTGCTGGCAGGCCTGATCCAGGTGACAATCCTGCT...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTTGCTCCACCCCAATCTaGGTTGCATGGGCATGGAAA +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPCSTPI*VAWAWK
Trigger: TTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCA...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTAGGCAAGACCCCATGTaGGGACCGGGTAAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPARQDPM*GPGKLT
Trigger: TGTGAGCTTACCCGGTCCCCACATGGGGTCTTGCCT...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCAATGGGCACCACGACCTaGCACATGATGGTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPMGTTT*HMMVKK
Trigger: TTTCTTCACCATCATGTGCCAGGTCGTGGTGCCCAT...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGCTGCAGTGGGCGCCCTaGCTAAAACCAAGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAELQWAP*LKPSSV
Trigger: AACAGAGCTTGGTTTTAGCCAGGGCGCCCACTGCAG...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR CCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCAGAAAGCTGGAAAGCTaGGTCCAGTCTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFRKLES*VQSRPS
Trigger: AGATGGGCGAGACTGGACCCAGCTTTCCAGCTTTCT...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR GCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGGGACAGTCCCAGGCCTaGAAACATGAAGGGCACGGT +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMGQSQA*KHEGHG
Trigger: ACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCC...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR GCA 90 bp AGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGTGGAGAGTCTGGATaGCAGTGTCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RGGTNVKRSFTSTNTGQCCGESG*QCHLQV
Trigger: AACCTGGAGATGACACTGGCATCCAGACTCTCCACA...GCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS-3UTR GCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTCTGATGACTCTGTGCTaGTCCTGGGGGTCATCAATT +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSLMTLC*SWGSSI
Trigger: AATTGATGACCCCCAGGAGCAGCACAGAGTCATCAG...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTATGCCAGTTCTGAGATaGCACCCAGCTCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPAMPVLR*HPALPC
Trigger: GCAAGGCAGAGCTGGGTGGCATCTCAGAACTGGCAT...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAATGCCAGTTCTGAGATaGCACCCAGCTCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPMPVLR*HPALPC
Trigger: GCAAGGCAGAGCTGGGTGGCATCTCAGAACTGGCAT...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACACTCACAAAAGGCTACTaGAGAGGCAGGGGTCAACCA +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTLTKGY*RGRGQP
Trigger: TGGTTGACCCCTGCCTCTGCAGTAGCCTTTTGTGAG...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGCTTAAAGCATACTGGACATaGCTCTTCTTTACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGEAVHLLGTAAVWPTELKAYWT*LFFTFS
Trigger: TGAGAAGGTAAAGAAGAGGCATGTCCAGTATGCTTT...AAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTAAAAGAGCTCCTTCCTaGTCCACCCCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSKRAPS*STPIWV
Trigger: AACCCAGATTGGGGTGGAGCAGGAAGGAGCTCTTTT...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTACAGCTGTGGAGAGTCTaGATGCCAGTGTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVQLWRV*MPVSSP
Trigger: TGGAGATGACACTGGCATCCAGACTCTCCACAGCTG...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAACAGCAACTCCACCTTaGCGACATCCACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTTATPP*RHPLPL
Trigger: GAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGT...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACGTGGCAATGTTGTCTaGGTTGACCCCGAGCTTTCG +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPRGNVV*VDPELS
Trigger: CGAAAGCTCGGGGTCAACCCAGACAACATTGCCACG...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GGCCAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCATGGCCAGGATGATTaGGAACCAGCCAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: GQDDWEPAKLQDLHDGWAHGQDD*EPAKLQ
Trigger: CTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATG...AGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACGAAAATCAGATGGCCTaGGACCACCAGCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHENQMA*DHQQEQ
Trigger: CTGCTCTTGCTGGTGGTCCCAGGCCATCTGATTTTC...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCAGCAGGATTGTCACCTaGATCAGGCCTGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELSRIVT*IRPASR
Trigger: CCTGCTGGCAGGCCTGATCCAGGTGACAATCCTGCT...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCTGGGTTGCATGGGCATaGAAAAGAGCAAACACACCC +
Preference number: 4 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGWVAWA*KRANTP
Trigger: GGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
3UTR CAA 72 bp ACACACTCAAGCCATGCTCTTGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACCCCAGAGCCGAGGTGT +
Preference number: 4 (lower is better)
Translates to: THSSHALDFRAL*QAQVSTPEPRC
Trigger: ACACCTCGGCTCTGGGGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTACATGTGCAGGTAGGTTaGGATTCGGCTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVHVQVG*DSAGLN
Trigger: ATTCAGACCAGCCGAATCTCAACCTACCTGCACATG...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp AAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCAGGTCTGGCTGTTTATaGCTGACTGACCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KPQLKSSEAWEQKRAPSCRSGCL*LTDPPP
Trigger: TGGTGGAGGGTCAGTCAGTCATAAACAGCCAGACCT...GCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTACAGCTCAAGAGTTCTaGGGCTTGGGAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSTAQEF*GLGTEK
Trigger: CTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGT...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTGTGTGGAGAGTCTGGATaGCAGTGTCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QDDWEPAKLQDLHDGWALCGESG*QCHLQV
Trigger: AACCTGGAGATGACACTGGCATCCAGACTCTCCACA...CAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCTGATGACTCTGTGCTaGTCCTGGGGGTCATCAATT +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCILMTLC*SWGSSI
Trigger: AATTGATGACCCCCAGGAGCAGCACAGAGTCATCAG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGCTGCTGATGACTCTGTaGTGCTCCTGGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMLLMTL*CSWGSS
Trigger: TGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAG...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCACCCAGCTCTGCCTTaGTCTTCAGTAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELHPALP*SSVASQ
Trigger: CTGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTG...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGCACCCAGCTCTGCCTTaGTCTTCAGTAGCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMHPALP*SSVASQ
Trigger: CTGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTG...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGACACCCCAATCTGGGTTaGATGGGCATGGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRHPNLG*MGMEKS
Trigger: GCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTG...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAAGCCTCGCAGCTTCTTaGCCTGAAAGCAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEASLAAS*PESKTP
Trigger: TGGAGTTTTGCTTTCAGGGCAAGAAGCTGCGAGGCT...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp CTGATGACCATGGCCAGGATGATTGGGAACCAGCCAAACTTCAGGATCTTCACGCAGCTGTGGAGAGTCTaGATGCCAGTGTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LMTMARMIGNQPNFRIFTQLWRV*MPVSSP
Trigger: TGGAGATGACACTGGCATCCAGACTCTCCACAGCTG...CGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATGGTCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGCAGTGTTGGCAGCTGTaGAGAGTCTGGATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMQCWQL*RVWMPV
Trigger: CACTGGCATCCAGACTCTCCACAGCTGCCAACACTG...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAACTCTGTGCTGCTCCTaGGGGTCATCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTTLCCS*GSSICP
Trigger: TGGACAAATTGATGACCCCCAGGAGCAGCACAGAGT...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp TCTTTACCTTCTCAGGCCAGAACACCCTCCTCTCCACAAACGTGTGCACACTTGACAGCAACTCCACCTTaGCGACATCCACTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SLPSQARTPSSPQTCAHLTATPP*RHPLPL
Trigger: GAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGT...CAAGTGTGCACACGTTTGTGGAGAGGAGGGTGTTCTGGCCTGAGAAGGTAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCATCAGGATCTTCACGATaGGTGGGCTCTGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPSGSSR*VGSAWQ
Trigger: TTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGA...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCACATGGCCAGGATGATTaGGAACCAGCCAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEAHGQDD*EPAKLQ
Trigger: CTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATG...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTCCCTGCAAAGCATACTaGACATGCCTCTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPPCKAY*TCLFFT
Trigger: GGTAAAGAAGAGGCATGTCCAGTATGCTTTGCAGGG...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATGGGTTGCATGGGCATaGAAAAGAGCAAACACACCC +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVWVAWA*KRANTP
Trigger: GGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp TGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACAAACTCCAGATTCAGCTaGGTGACCACCATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WVAWAWKRANTPCKAYWTNSRFS*VTTMAR
Trigger: CCTGGCCATGGTGGTCACCCAGCTGAATCTGGAGTT...TGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CCA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTAAAAGGGGAAGAAAGCTaGAAAGCTGGGTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVKGEES*KAGSSL
Trigger: GAGACTGGACCCAGCTTTCCAGCTTTCTTCCCCTTT...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR TCA 90 bp AAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCCGCAGCTTCTTGCCCTaGAAGCAAAACTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: KPQLKSSEAWEQKRAPSCRSFLP*KQNSRF
Trigger: GAATCTGGAGTTTTGCTTTCAGGGCAAGAAGCTGCG...GCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR TCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTAACACAGGCCAGTGTTaGATGGTGTTCATCACCAGG +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPANTGQC*MVFITR
Trigger: CCTGGTGATGAACACCATTCAACACTGGCCTGTGTT...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGCCCCAGGGCAAAGGCTaGAAGGAAGGCAGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAPQGKG*KEGSED
Trigger: GTCCTCACTGCCTTCCTTGCAGCCTTTGCCCTGGGG...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAATTTCAGGGCTCTATTaGAGGCTCAGGTATCAACCC +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEAISGLY*RLRYQP
Trigger: GGGTTGATACCTGAGCCTGCAATAGAGCCCTGAAAT...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTAAACGTGTGCACACTTaGACGCTCATTAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPKRVHT*TLIKHV
Trigger: CACATGCTTAATGAGCGTGCAAGTGTGCACACGTTT...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACACTCTCCACAAACGTGTaGACACTTGCACGCTCATTA +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTLSTNV*TLARSL
Trigger: TAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAG...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCTCTCCACAAACGTGTaGACACTTGCACGCTCATTA +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCILSTNV*TLARSL
Trigger: TAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGTCAGGATCTTCACGATaGGTGGGCTCTGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMSGSSR*VGSAWQ
Trigger: TTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGA...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGCCCTGCAAAGCATACTaGACATGCCTCTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAEPCKAY*TCLFFT
Trigger: GGTAAAGAAGAGGCATGTCCAGTATGCTTTGCAGGG...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGTaGGAGGAAATTCTAATGAGC +
Preference number: 4 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFCIPLM*EEILMS
Trigger: GCTCATTAGAATTTCCTCTCACATCAGTGGGATACA...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGTGGCAAGGGAGAAACTaGATTCTGTATCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAEWQGRN*ILYPTD
Trigger: ATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCA...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAACAGCTCAAGAGTTCTaGGGCTTGGGAACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRTAQEF*GLGTEK
Trigger: CTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGT...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGTGTGGAGAGTCTGGATaGCAGTGTCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMCGESG*QCHLQV
Trigger: AACCTGGAGATGACACTGGCATCCAGACTCTCCACA...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGACGATGGGTGGGCTCTaGTTGGCAATGAGGACCCAC +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPATMGGL*LAMRTH
Trigger: GTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp GCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTAAAAGAGCTCCTTCCTaGTCCACCCCAATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ASKPQLKSSEAWEQKRAPKRAPS*STPIWV
Trigger: AACCCAGATTGGGGTGGAGCAGGAAGGAGCTCTTTT...AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTACAAACACAGGCCAGTaGTTACACTTTCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: AEAGVNHPKDLAREKLNSTNTGQ*LHFQEN
Trigger: ATTCTCCTGAAAGTGTAAGCACTGGCCTGTGTTTGT...AGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508835.5
CDS-3UTR CCA 90 bp TGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACAATTCTAATGAGCAAATaGGACCAGCGGGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WVAWAWKRANTPCKAYWTILMSK*DQRGPV
Trigger: AACTGGGCCCCGCTGGTCCCATTTGCTCATTAGAAT...TGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGACCAATCTGGGTTGCATaGGCATGGAAAAGAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRPIWVA*AWKRAN
Trigger: GTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGG...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp GTGTCTGTAGAAGAAGCTGCTAACCAAAGCCAGAATGGACAGTGTGATGAGGTCAGAAAGCTGGAAAGCTaGGTCCAGTCTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: VSVEEAANQSQNGQCDEVRKLES*VQSRPS
Trigger: AGATGGGCGAGACTGGACCCAGCTTTCCAGCTTTCT...GACCTCATCACACTGTCCATTCTGGCTTTGGTTAGCAGCTTCTTCTACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR TCA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTGAGCTGACATGGAATTaGTTTCTGACGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SHSSRVLRLGNRKELLPAELTWN*FLTCRK
Trigger: CTTTCTGCACGTCAGAAATCAATTCCATGTCAGCTC...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCTCCACCAGGTAGATaGTGTAGAAGAAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIPPPGR*CRRKSD
Trigger: ATCTGATTTTCTTCTACATCATCTACCTGGTGGAGG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACGACACGATTAAATGTTaGGTGCAGATGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHDTIKC*VQMKGC
Trigger: ACAACCCTTCATCTGCACTCAACATTTAATCGTGTC...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGACACGATTAAATGTTaGGTGCAGATGAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: EPRCVRATLADSQKATAEDTIKC*VQMKGC
Trigger: ACAACCCTTCATCTGCACTCAACATTTAATCGTGTC...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACATGTATCCCACTGATGTaGGAGGAAATTCTAATGAGC +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTCIPLM*EEILMS
Trigger: GCTCATTAGAATTTCCTCTCACATCAGTGGGATACA...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCTGTATCCCACTGATGTaGGAGGAAATTCTAATGAGC +
Preference number: 4 (lower is better)
Translates to: GRGQPSQGPGKGETEFCICIPLM*EEILMS
Trigger: GCTCATTAGAATTTCCTCTCACATCAGTGGGATACA...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCATGGCAAGGGAGAAACTaGATTCTGTATCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPWQGRN*ILYPTD
Trigger: ATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCA...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGGCCAGCACAGATGAGTaGGGAACAAAGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAASTDE*GTKASV
Trigger: CACACTGGCCTTTGTTCCTCACTCATCTGTGCTGGC...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR GCA 90 bp GTGTCTGTAGAAGAAGCTGCTAACCAAAGCCAGAATGGACAGTGTGATGAGGTCCTGATGACTCTGTGCTaGTCCTGGGGGTCATCAATT +
Preference number: 4 (lower is better)
Translates to: VSVEEAANQSQNGQCDEVLMTLC*SWGSSI
Trigger: AATTGATGACCCCCAGGAGCAGCACAGAGTCATCAG...GACCTCATCACACTGTCCATTCTGGCTTTGGTTAGCAGCTTCTTCTACAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR GCA 90 bp TCAGGTATCAACCCCAGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAGCCATGCCTTTGTACTaGTGTTTAGAAACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SGINPRAEVCESYLSRLTAMPLY*CLETVL
Trigger: CAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGC...TGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCTGGGGTTGATACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTATTTCAGGGCTCTATTaGAGGCTCAGGTATCAACCC +
Preference number: 4 (lower is better)
Translates to: ASKPQLKSSEAWEQKRAPISGLY*RLRYQP
Trigger: GGGTTGATACCTGAGCCTGCAATAGAGCCCTGAAAT...AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp GCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTAGAGCAAACACACCCTaGAAAGCATACTGGACATGC +
Preference number: 4 (lower is better)
Translates to: ASKPQLKSSEAWEQKRAPRANTP*KAYWTC
Trigger: GCATGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCT...AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRDLHDG*ALLGNE
Trigger: CTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATC...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGACAGAATTTCTTCATCTaGAGGGGCAGGACGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRQNFFI*RGRTPG
Trigger: ACCTGGCGTCCTGCCCCTCCAGATGAAGAAATTCTG...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGACATGTGCAGGTAGGTTaGGATTCGGCTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRHVQVG*DSAGLN
Trigger: ATTCAGACCAGCCGAATCTCAACCTACCTGCACATG...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCACATGGAATTGATTTCTaGCGTGCAGAAAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: PRCVRATLADSQKATAEAHGIDF*RAESRT
Trigger: TGTTCTACTTTCTGCACGTCAGAAATCAATTCCATG...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACCATGGAATTGATTTCTaGCGTGCAGAAAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHHGIDF*RAESRT
Trigger: TGTTCTACTTTCTGCACGTCAGAAATCAATTCCATG...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGGAGCTGACATGGAATTaGTTTCTGACGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMELTWN*FLTCRK
Trigger: CTTTCTGCACGTCAGAAATCAATTCCATGTCAGCTC...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAACTCTGTGCTGCTCCTaGGGGTCATCAATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRTLCCS*GSSICP
Trigger: TGGACAAATTGATGACCCCCAGGAGCAGCACAGAGT...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGGATCTTCACGATGGGTaGGCTCTGCTTGGCAATGAG +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPADLHDG*ALLGNE
Trigger: CTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATC...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp AAGACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGACATGGCCAGGATGATTaGGAACCAGCCAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: KTASKPQLKSSEAWEQKRHGQDD*EPAKLQ
Trigger: CTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATG...TCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR TCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGCCTCCACCAGGTAGATaGTGTAGAAGAAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMPPPGR*CRRKSD
Trigger: ATCTGATTTTCTTCTACATCATCTACCTGGTGGAGG...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGTGTGGAGAGTCTGGATaGCAGTGTCATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPACGESG*QCHLQV
Trigger: AACCTGGAGATGACACTGGCATCCAGACTCTCCACA...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGCTGATGACTCTGTGCTaGTCCTGGGGGTCATCAATT +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPALMTLC*SWGSSI
Trigger: AATTGATGACCCCCAGGAGCAGCACAGAGTCATCAG...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGGCCATGCCTTTGTACTaGTGTTTAGAAACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMAMPLY*CLETVL
Trigger: CAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGC...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGATTCTAATGAGCAAATaGGACCAGCGGGGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAILMSK*DQRGPV
Trigger: AACTGGGCCCCGCTGGTCCCATTTGCTCATTAGAAT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR TCA 90 bp CAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGATGCATGGAATTGATTTCTaGCGTGCAGAAAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: QPSQGPGKGETEFCIPLMHGIDF*RAESRT
Trigger: TGTTCTACTTTCTGCACGTCAGAAATCAATTCCATG...CATCAGTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGAAACGTGTGCACACTTaGACGCTCATTAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAKRVHT*TLIKHV
Trigger: CACATGCTTAATGAGCGTGCAAGTGTGCACACGTTT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGAAGAGTTCTGAGGCTTaGGAACAGAAAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAKSSEA*EQKRAP
Trigger: AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR GCA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGAAAGCATACTGGACATaGCTCTTCTTTACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAKAYWT*LFFTFS
Trigger: TGAGAAGGTAAAGAAGAGGCATGTCCAGTATGCTTT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS GCA 90 bp AGGCAATGCACCACGATCCCAGGAGCACGAAGTCAGAGCCTGGGGTaGTCCAGTCCTCTCCTCCTGGCCCACACCAGGACGCTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: RQCTTIPGARSQSLG*SSPLLLAHTRTLFP
Trigger: TGGGAACAGCGTCCTGGTGTGGGCCAGGAGGAGAGGACTGGAGCACCCCAGGCTCTGACTTCGTGCTCCTGGGATCGTGGTGCATTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS CCA 90 bp AAGGCCTATGGACCAGGTGGTCTCCCTGCTAGGCTCAGTCTCCAGTaGCTTGGGGGTCACGCTTTGGCTCTCAGGGGCCCTGAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: KAYGPGGLPARLSLQ*LGGHALALRGPESS
Trigger: GGAGCTCTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTGAGCCTAGCAGGGAGACCACCTGGTCCATAGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS TCA 90 bp GCCCAGGACAGTCCCAGGCCTGCAAACATGAAGGGCACGGTCACCTaGAGGCCTATGGACCAGGTGGTCTCCCTGCTAGGCTCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: AQDSPRPANMKGTVT*RPMDQVVSLLGSVS
Trigger: GGAGACTGAGCCTAGCAGGGAGACCACCTGGTCCATAGGCCTTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS TCA 90 bp AGTCCAGAAGCATGCCGGCCCAGGACAGTCCCAGGCCTGCAAACATaGAGGGCACGGTCACCTGAAGGCCTATGGACCAGGTGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SPEACRPRTVPGLQT*RARSPEGLWTRWSP
Trigger: GGGAGACCACCTGGTCCATAGGCCTTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCCTGGGCCGGCATGCTTCTGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS CCA 90 bp GTCTCCCTGCTAGGCTCAGTCTCCAGTGGCTTGGGGGTCACGCTTTaGCTCTCAGGGGCCCTGAGAGCTCCATCTTCTGAGGCTACAGGG +
Preference number: 5 (lower is better)
Translates to: VSLLGSVSSGLGVTL*LSGALRAPSSEATG
Trigger: CCCTGTAGCCTCAGAAGATGGAGCTCTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTGAGCCTAGCAGGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS CCA 90 bp ATGCATACTCGGAGGGCCCCGTGTCTCCCAGGAACAGTCCTGCACTaGGAGCTTAGCGGTGCTGTCCATGGTGCACTGGGAAGCACGTGC +
Preference number: 5 (lower is better)
Translates to: MHTRRAPCLPGTVLH*ELSGAVHGALGSTC
Trigger: GCACGTGCTTCCCAGTGCACCATGGACAGCACCGCTAAGCTCCCAGTGCAGGACTGTTCCTGGGAGACACGGGGCCCTCCGAGTATGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 90 bp CACTGGGAAGCACGTGCAGTGGTGGCGGATTTCTGGGGGCAGCACTaGAGAGGTGAGGCTCACGTTTCCGTGGCTACCATGCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: HWEARAVVADFWGQH*RGEAHVSVATMPPK
Trigger: CTTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCCAGAAATCCGCCACCACTGCACGTGCTTCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 90 bp GTCAGATGCATACTCGGAGGGCCCCGTGTCTCCCAGGAACAGTCCTaGACTGGGAGCTTAGCGGTGCTGTCCATGGTGCACTGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VRCILGGPRVSQEQS*TGSLAVLSMVHWEA
Trigger: TGCTTCCCAGTGCACCATGGACAGCACCGCTAAGCTCCCAGTGCAGGACTGTTCCTGGGAGACACGGGGCCCTCCGAGTATGCATCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 90 bp CCATGCAACGTGGCCAACGTGTGGCAACTGCTTTCCCTGCACATGTaGGAGCCCCAAGGAAGGGGTATGTCTGCCCGCATCTGTCTCCCG +
Preference number: 5 (lower is better)
Translates to: PCNVANVWQLLSLHM*EPQGRGMSARICLP
Trigger: CGGGAGACAGATGCGGGCAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 90 bp GGGCCCATGGGAAGGGGAGAGAGGACGTGGGTGCATGTGGGAGTGTaGTGCTGTGCACTCAACACTGCTGTCCCCCTAACCCACATGTTG +
Preference number: 5 (lower is better)
Translates to: GPMGRGERTWVHVGV*CCALNTAVPLTHML
Trigger: CAACATGTGGGTTAGGGGGACAGCAGTGTTGAGTGCACAGCACCACACTCCCACATGCACCCACGTCCTCTCTCCCCTTCCCATGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp GGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGCCCAGCTCCCCTGGCTaGCCACAGCTGTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GRHQCQKVFHLHKHRPVLPSSPG*PQLSSL
Trigger: GAGGCTGGACAGCTGTGGCAAGCCAGGGGAGCTGGG...CAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS TCA 90 bp AGCACGTGCAGTGGTGGCGGATTTCTGGGGGCAGCACTGAAGAGGTaGGGCTCACGTTTCCGTGGCTACCATGCCTCCGAAGTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: STCSGGGFLGAALKR*GSRFRGYHASEVLL
Trigger: AAGGAGGACTTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCCAGAAATCCGCCACCACTGCACGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 90 bp GTCAGGATCCAGGGCCTGGTGCCAAGTCAGCCGAACCATCACTTCTaGGAGGTACAGCAGGATTGTCACCTGGATCAGGCCTGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VRIQGLVPSQPNHHF*EVQQDCHLDQACQQ
Trigger: CTGCTGGCAGGCCTGATCCAGGTGACAATCCTGCTGTACCTCGCAGAAGTGATGGTTCGGCTGACTTGGCACCAGGCCCTGGATCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS-3UTR CAA 90 bp TTCAGGCCCACCAGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACCTTGGGGGTCACGCTTaGGCTCTCAGGGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: FRPTRGGTNVKRSFTSTNLGGHA*ALRGPE
Trigger: CTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAG...GTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGGGCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS TCA 90 bp GGGGACCGGGTAAGCTCACAGCTGAAGCCTCGCAGCTTCTTGCCCTaGAAGCAAAACTCCAGATTCAGCTGGGTGACCACCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GDRVSSQLKPRSFLP*KQNSRFSWVTTMAR
Trigger: CCTGGCCATGGTGGTCACCCAGCTGAATCTGGAGTTTTGCTTTCAGGGCAAGAAGCTGCGAGGCTTCAGCTGTGAGCTTACCCGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS TCA 90 bp AAAGCTGGGTCCAGTCTCGCCCATCTGCACCAGAGGTCTCCAGCGTaGCTGCAGTGGGCGCCCTGGCTAAAACCAAGCTCTGTTTGTGTC +
Preference number: 5 (lower is better)
Translates to: KAGSSLAHLHQRSPA*LQWAPWLKPSSVCV
Trigger: GACACAAACAGAGCTTGGTTTTAGCCAGGGCGCCCACTGCAGTCACGCTGGAGACCTCTGGTGCAGATGGGCGAGACTGGACCCAGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS GCA 90 bp CTGGAAATAGTCCAGAAGCATGCCGGCCCAGGACAGTCCCAGGCCTaGAAACATGAAGGGCACGGTCACCTGAAGGCCTATGGACCAGGT +
Preference number: 5 (lower is better)
Translates to: LEIVQKHAGPGQSQA*KHEGHGHLKAYGPG
Trigger: ACCTGGTCCATAGGCCTTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCCTGGGCCGGCATGCTTCTGGACTATTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS GCA 90 bp GCCTGCACCTGGATGAGGGCCAGGTTGCTGCTGATGACTCTGTGCTaGTCCTGGGGGTCATCAATTTGTCCAGTGTTGGCAGCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ACTWMRARLLLMTLC*SWGSSICPVLAAVE
Trigger: CTCCACAGCTGCCAACACTGGACAAATTGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCAGGTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315891.10
ENST00000360370.9
ENST00000383598.6
ENST00000507008.5
ENST00000508835.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
CDS GCA 90 bp AAGCAAAACTCCAGATTCAGCTGGGTGACCACCATGGCCAGGCAATaGACCACGATCCCAGGAGCACGAAGTCAGAGCCTGGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: KQNSRFSWVTTMARQ*TTIPGARSQSLGCS
Trigger: GGAGCACCCCAGGCTCTGACTTCGTGCTCCTGGGATCGTGGTGCATTGCCTGGCCATGGTGGTCACCCAGCTGAATCTGGAGTTTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS CCA 90 bp CTGTTCTTCTCTGGAAAGTCTGGCACATTCATCCCGCCCCATCTGTaGACCAGGCTGGGTCATGGCATCCACCATCCGTCCATGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LFFSGKSGTFIPPHL*TRLGHGIHHPSMPA
Trigger: CGCAGGCATGGACGGATGGTGGATGCCATGACCCAGCCTGGTCCACAGATGGGGCGGGATGAATGTGCCAGACTTTCCAGAGAAGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp GAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGCTTGGGGGTCACGCTTaGGCTCTCAGGGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: EPRCVRATLADSQKATAELGGHA*ALRGPE
Trigger: CTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAG...CTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CAA 90 bp GCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGTGGATGAGGGCCAGGTaGCTGCTGATGACTCTGTGC +
Preference number: 5 (lower is better)
Translates to: ATAEAGVNHPKDLAREKLWMRAR*LLMTLC
Trigger: GCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCA...CAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS TCA 90 bp TACACTGGAGGCCTGAGAAGGCTGGGAGAGTTGGACTCCACTTTGTaGCCTGTGCACATGATGCTAAGGAGTGACCCGTGGCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: YTGGLRRLGELDSTL*PVHMMLRSDPWLPS
Trigger: GCTCGGGAGCCACGGGTCACTCCTTAGCATCATGTGCACAGGTCACAAAGTGGAGTCCAACTCTCCCAGCCTTCTCAGGCCTCCAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 90 bp CCTTATGAAAGAGGCTCCAAAGAGCTCCCACCTCTCTCCACTGTGTaGGGACAGCGAGAAGGGCCGACTGCAGCCTCAAAGGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PYERGSKELPPLSTV*GQREGPTAASKGAA
Trigger: AGCTGCTCCCTTTGAGGCTGCAGTCGGCCCTTCTCGCTGTCCTCACACAGTGGAGAGAGGTGGGAGCTCTTTGGAGCCTCTTTCATAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp GGGGGCAGCACTGAAGAGGTGAGGCTCACGTTTCCGTGGCTACCATaGCTCCGAAGTCCTCCTTCCTGTTCAGACTGTTCAGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: GGSTEEVRLTFPWLP*LRSPPSCSDCSDCA
Trigger: AGCACAGTCTGAACAGTCTGAACAGGAAGGAGGACTTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 90 bp GGGAAGGGGAGAGAGGACGTGGGTGCATGTGGGAGTGTGGTGCTGTaGACTCAACACTGCTGTCCCCCTAACCCACATGTTGAAATCCTC +
Preference number: 5 (lower is better)
Translates to: GKGREDVGACGSVVL*TQHCCPPNPHVEIL
Trigger: GAGGATTTCAACATGTGGGTTAGGGGGACAGCAGTGTTGAGTGCACAGCACCACACTCCCACATGCACCCACGTCCTCTCTCCCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp ACTGCTTTCCCTGCACATGTGCGAGCCCCAAGGAAGGGGTATGTCTaGCCGCATCTGTCTCCCGTGTGTCGCAGATACACGTTAAGCACC +
Preference number: 5 (lower is better)
Translates to: TAFPAHVRAPRKGYV*PHLSPVCRRYTLST
Trigger: GGTGCTTAACGTGTATCTGCGACACACGGGAGACAGATGCGGGCAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp ATGGACAACCATGCAACGTGGCCAACGTGTGGCAACTGCTTTCCCTaGACATGTGCGAGCCCCAAGGAAGGGGTATGTCTGCCCGCATCT +
Preference number: 5 (lower is better)
Translates to: MDNHATWPTCGNCFP*TCASPKEGVCLPAS
Trigger: AGATGCGGGCAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp AGCCAACACCCTGAGCAGGGACACGTGGTTTGTAAACCTGCAGCCTaGTTTGGCACAGTCCTCTTCTGGCCTACACCCTCCATGCACTGG +
Preference number: 5 (lower is better)
Translates to: SQHPEQGHVVCKPAA*FGTVLFWPTPSMHW
Trigger: CCAGTGCATGGAGGGTGTAGGCCAGAAGAGGACTGTGCCAAAGCAGGCTGCAGGTTTACAAACCACGTGTCCCTGCTCAGGGTGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 90 bp GACGTGAAGCCAGGCTGCCCTGACTTTCAGAGCTTCCCACTACACTaGAGGCCTGAGAAGGCTGGGAGAGTTGGACTCCACTTTGTGACC +
Preference number: 5 (lower is better)
Translates to: DVKPGCPDFQSFPLH*RPEKAGRVGLHFVT
Trigger: GGTCACAAAGTGGAGTCCAACTCTCCCAGCCTTCTCAGGCCTCCAGTGTAGTGGGAAGCTCTGAAAGTCAGGGCAGCCTGGCTTCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS-3UTR CAA 90 bp TGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACACCCAGCTCCCCTGGCTaGCCACAGCTGTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: WVAWAWKRANTPCKAYWTPSSPG*PQLSSL
Trigger: GAGGCTGGACAGCTGTGGCAAGCCAGGGGAGCTGGG...TGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CAA 90 bp CATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGTCAATTTGTCCAGTGTaGGCAGCTGTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: HPGEAVHLLGTAAVWPTESICPV*AAVESL
Trigger: CAGACTCTCCACAGCTGCCAACACTGGACAAATTGA...CTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp TTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTGGGTGGATGAGGGCCAGGTaGCTGCTGATGACTCTGTGC +
Preference number: 5 (lower is better)
Translates to: FRIFTMGGLCLAMRTHTGWMRAR*LLMTLC
Trigger: GCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCA...CCCAGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CAA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCAATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACT +
Preference number: 5 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPMGGLC*AMRTHT
Trigger: AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCAT...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp CCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGGAGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACC +
Preference number: 5 (lower is better)
Translates to: PSWGGCTPSWHSSSVAHGDFRAL*QAQVST
Trigger: GGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATC...TCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp CCCCATCCTGGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTGGCCCACGACTCAAGCCATGCTCTaGATTTCAGGGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: PHPGEAVHLLGTAAVWPTTQAML*ISGLYC
Trigger: GCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGT...CGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCCAGGATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS TCA 90 bp CTCGCAGCTTCTTGCCCTGAAAGCAAAACTCCAGATTCAGCTGGGTaGCCACCATGGCCAGGCAATGCACCACGATCCCAGGAGCACGAA +
Preference number: 5 (lower is better)
Translates to: LAASCPESKTPDSAG*PPWPGNAPRSQEHE
Trigger: TTCGTGCTCCTGGGATCGTGGTGCATTGCCTGGCCATGGTGGTCACCCAGCTGAATCTGGAGTTTTGCTTTCAGGGCAAGAAGCTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS CCA 90 bp ACCTGGATGAGGGCCAGGTTGCTGCTGATGACTCTGTGCTGCTCCTaGGGGTCATCAATTTGTCCAGTGTTGGCAGCTGTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TWMRARLLLMTLCCS*GSSICPVLAAVESL
Trigger: CAGACTCTCCACAGCTGCCAACACTGGACAAATTGATGACCCCCAGGAGCAGCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315891.10
ENST00000360370.9
ENST00000383598.6
ENST00000504035.5
ENST00000507008.5
ENST00000507280.5
ENST00000508835.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514891.5
CDS CCA 90 bp GACCTGGCACATGATGGTGAAGAAAGATTCAGGCAAGACCCCATGTaGGGACCGGGTAAGCTCACAGCTGAAGCCTCGCAGCTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: DLAHDGEERFRQDPM*GPGKLTAEASQLLA
Trigger: GGCAAGAAGCTGCGAGGCTTCAGCTGTGAGCTTACCCGGTCCCCACATGGGGTCTTGCCTGAATCTTTCTTCACCATCATGTGCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383598.6
ENST00000513723.5
CDS-3UTR CAA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCAGCAATGTTGTCTGGGTaGACCCCGAGCTTTCGAGCA +
Preference number: 5 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPAMLSG*TPSFRA
Trigger: TGCTCGAAAGCTCGGGGTCAACCCAGACAACATTGC...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCCACCCAGCTCTGCCTaGCTCTTCAGTAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFPPSSA*LFSSQS
Trigger: TGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTGG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS TCA 90 bp GGGAGGCTGCTCATTAACTTGCCTCCCTCCACAAAGTCCTTGACGTaGAGCCAGGCTGCCCTGACTTTCAGAGCTTCCCACTACACTGGA +
Preference number: 5 (lower is better)
Translates to: GRLLINLPPSTKSLT*SQAALTFRASHYTG
Trigger: TCCAGTGTAGTGGGAAGCTCTGAAAGTCAGGGCAGCCTGGCTTCACGTCAAGGACTTTGTGGAGGGAGGCAAGTTAATGAGCAGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 90 bp GAATCACCAATGGACAACCATGCAACGTGGCCAACGTGTGGCAACTaGTTTCCCTGCACATGTGCGAGCCCCAAGGAAGGGGTATGTCTG +
Preference number: 5 (lower is better)
Translates to: ESPMDNHATWPTCGN*FPCTCASPKEGVCL
Trigger: CAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCATTGGTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp GGCCTACACCCTCCATGCACTGGCACAGGAATGGGCCTGATTAGCTaGCTGGTAGGAATGAGAATAGCCCACATGGGTAACCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: GLHPPCTGTGMGLIS*LVGMRIAHMGNPQR
Trigger: TCTCTGTGGGTTACCCATGTGGGCTATTCTCATTCCTACCAGGCAGCTAATCAGGCCCATTCCTGTGCCAGTGCATGGAGGGTGTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 90 bp GCTGTCATCATGCACAAGCCGGACAGCAGAATGGGCACCACGACCTaGCACATGATGGTGAAGAAAGATTCAGGCAAGACCCCATGTGGG +
Preference number: 5 (lower is better)
Translates to: AVIMHKPDSRMGTTT*HMMVKKDSGKTPCG
Trigger: CCCACATGGGGTCTTGCCTGAATCTTTCTTCACCATCATGTGCCAGGTCGTGGTGCCCATTCTGCTGTCCGGCTTGTGCATGATGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383598.6
ENST00000513723.5
CDS CCA 90 bp AGACACCCAGCAACAACTGAATCACCAATGGACAACCATGCAACGTaGCCAACGTGTGGCAACTGCTTTCCCTGCACATGTGCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: RHPATTESPMDNHAT*PTCGNCFPCTCASP
Trigger: GGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCATTGGTGATTCAGTTGTTGCTGGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 90 bp GACTTTATGCTGAGGGTCTCCTGGACTGTTCTTCTCTGGAAAGTCTaGCACATTCATCCCGCCCCATCTGTGGACCAGGCTGGGTCATGG +
Preference number: 5 (lower is better)
Translates to: DFMLRVSWTVLLWKV*HIHPAPSVDQAGSW
Trigger: CCATGACCCAGCCTGGTCCACAGATGGGGCGGGATGAATGTGCCAGACTTTCCAGAGAAGAACAGTCCAGGAGACCCTCAGCATAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp AAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTCAGTCTCCAGTGGCTaGGGGGTCACGCTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: KPQLKSSEAWEQKRAPSCSVSSG*GVTLWL
Trigger: GAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTGA...GCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360370.9
CDS-3UTR CAA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCATGGATGAGGGCCAGGTaGCTGCTGATGACTCTGTGC +
Preference number: 5 (lower is better)
Translates to: PRCVRATLADSQKATAEAWMRAR*LLMTLC
Trigger: GCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCA...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACTGGATGAGGGCCAGGTaGCTGCTGATGACTCTGTGC +
Preference number: 5 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHWMRAR*LLMTLC
Trigger: GCACAGAGTCATCAGCAGCAACCTGGCCCTCATCCA...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCACAGCAACTCCACCTaGGCGACATCCACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFHSNST*ATSTSS
Trigger: AGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp AAACTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACT +
Preference number: 5 (lower is better)
Translates to: KLQDLHDGWALLGNEDPHMGGLC*AMRTHT
Trigger: AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCAT...GTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CAA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCGAGGTACAGCAGGATaGTCACCTGGATCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: GRGQPSQGPGKGETEFCIRGTAG*SPGSGL
Trigger: CAGGCCTGATCCAGGTGACAATCCTGCTGTACCTCG...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp CCTGCTCCACCCCAATCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTAGTGCAGATGAAGGGTaGTATGAGGCCCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: PAPPQSGLHGHGKEQTHPSADEG*YEAPSW
Trigger: CCAGGATGGGGCCTCATACAACCCTTCATCTGCACT...AGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp GGCTACTGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGATTTCAGGGCTCTATaGCAGGCTCAGGTATCAACC +
Preference number: 5 (lower is better)
Translates to: GYCRGRGQPSQGPGKGETDFRAL*QAQVST
Trigger: GGTTGATACCTGAGCCTGCAATAGAGCCCTGAAATC...AGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp TGCAGAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCCCACCCCAATCTGGGTaGCATGGGCATGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: CRGRGQPSQGPGKGETEFPPQSG*HGHGKE
Trigger: CTCTTTTCCATGCCCATGCAACCCAGATTGGGGTGG...GAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS TCA 90 bp AGAGTTGGACTCCACTTTGTGACCTGTGCACATGATGCTAAGGAGTaGCCCGTGGCTCCCGAGCTCCCAAATCACCAGGAACCACAGAGA +
Preference number: 5 (lower is better)
Translates to: RVGLHFVTCAHDAKE*PVAPELPNHQEPQR
Trigger: TCTCTGTGGTTCCTGGTGATTTGGGAGCTCGGGAGCCACGGGTCACTCCTTAGCATCATGTGCACAGGTCACAAAGTGGAGTCCAACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS CCA 90 bp CTGTCTCCCGTGTGTCGCAGATACACGTTAAGCACCAGCTGTGTTTaGCATGAGAAAGGAGCAGCAGACAGCAGGTGGGAACTACTGGGT +
Preference number: 5 (lower is better)
Translates to: LSPVCRRYTLSTSCV*HEKGAADSRWELLG
Trigger: ACCCAGTAGTTCCCACCTGCTGTCTGCTGCTCCTTTCTCATGCCAAACACAGCTGGTGCTTAACGTGTATCTGCGACACACGGGAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp GAGGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTACACAGCAACTCCACCTaGGCGACATCCACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: EAGVNHPKDLAREKLNSVHSNST*ATSTSS
Trigger: AGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTG...TACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp AACTTCAGGATCTTCACGATGGGTGGGCTCTGCTTGGCAATGAGGACCCACACTGCAATGTTGTCTGGGTaGACCCCGAGCTTTCGAGCA +
Preference number: 5 (lower is better)
Translates to: NFRIFTMGGLCLAMRTHTAMLSG*TPSFRA
Trigger: TGCTCGAAAGCTCGGGGTCAACCCAGACAACATTGC...AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCATCGTGAAGATCCTGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS-3UTR CAA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAGCAATGTTGTCTGGGTaGACCCCGAGCTTTCGAGCA +
Preference number: 5 (lower is better)
Translates to: PRCVRATLADSQKATAEAAMLSG*TPSFRA
Trigger: TGCTCGAAAGCTCGGGGTCAACCCAGACAACATTGC...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACT +
Preference number: 5 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPMGGLC*AMRTHT
Trigger: AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCAT...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTAGGCTGTACACCTTCTaGGCACAGCAGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: SHSSRVLRLGNRKELLPARLYTF*AQQQCG
Trigger: GCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCT...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGACCACCCAGCTCTGCCTaGCTCTTCAGTAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRPPSSA*LFSSQS
Trigger: TGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTGG...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp CCACCAGGGGCGGCACCAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCGCCAACACCTTGATCTaGGACTTCCAGCCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: PPGAAPMSKGLSPPQTQAANTLI*DFQPLE
Trigger: TTCTAGAGGCTGGAAGTCCAAGATCAAGGTGTTGGC...GGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTGGTGCCGCCCCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS CCA 90 bp CAAGATGAGTCCTCCGAAACTGCTGATGACCATGGCCAGGATGATTaGGAACCAGCCAAACTTCAGGATCTTCACGATGGGTGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QDESSETADDHGQDD*EPAKLQDLHDGWAL
Trigger: CAGAGCCCACCCATCGTGAAGATCCTGAAGTTTGGCTGGTTCCCAATCATCCTGGCCATGGTCATCAGCAGTTTCGGAGGACTCATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CCA 90 bp GCAGCCCTTACACTTTCAGGAGAATTATGGAAAGGGGAAGAAAGCTaGAAAGCTGGGTCCAGTCTCGCCCATCTGCACCAGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: AALTLSGELWKGEES*KAGSSLAHLHQRSP
Trigger: TGGAGACCTCTGGTGCAGATGGGCGAGACTGGACCCAGCTTTCCAGCTTTCTTCCCCTTTCCATAATTCTCCTGAAAGTGTAAGGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509064.5
CDS-3UTR CAA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAGCAATGTTGTCTGGGTaGACCCCGAGCTTTCGAGCA +
Preference number: 5 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPAMLSG*TPSFRA
Trigger: TGCTCGAAAGCTCGGGGTCAACCCAGACAACATTGC...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp TGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACAATGGGTGGGCTCTGCTaGGCAATGAGGACCCACACT +
Preference number: 5 (lower is better)
Translates to: WVAWAWKRANTPCKAYWTMGGLC*AMRTHT
Trigger: AGTGTGGGTCCTCATTGCCAAGCAGAGCCCACCCAT...TGTCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp GCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTCGAGGTACAGCAGGATaGTCACCTGGATCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ASKPQLKSSEAWEQKRAPRGTAG*SPGSGL
Trigger: CAGGCCTGATCCAGGTGACAATCCTGCTGTACCTCG...AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp TCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGACCACCCAGCTCTGCCTaGCTCTTCAGTAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: SGLHGHGKEQTHPAKHTGPPSSA*LFSSQS
Trigger: TGACTGGCTACTGAAGAGCAAGGCAGAGCTGGGTGG...TCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCTGTGGCCCACGGAGCTaGAACCTGGTGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELCGPRS*NLVKTA
Trigger: TGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACA...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp TCTGGGTTGCATGGGCATGGAAAAGAGCAAACACACCCTGCAAAGCATACTGGATGTGGCCCACGGAGCTaGAACCTGGTGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: SGLHGHGKEQTHPAKHTGCGPRS*NLVKTA
Trigger: TGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACA...TCCAGTATGCTTTGCAGGGTGTGTTTGCTCTTTTCCATGCCCATGCAACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS CCA 90 bp CCAGTGCTTACACTTTCAGGAGAATTATGGAAAGGGGAAGAAAGCTaGAAAGCTGGGTCCAGTCTCGCCCATCTGCACCAGAGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PVLTLSGELWKGEES*KAGSSLAHLHQRSP
Trigger: TGGAGACCTCTGGTGCAGATGGGCGAGACTGGACCCAGCTTTCCAGCTTTCTTCCCCTTTCCATAATTCTCCTGAAAGTGTAAGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507008.5
ENST00000508835.5
CDS-3UTR CAA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCATCAATTTGTCCAGTGTaGGCAGCTGTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PRCVRATLADSQKATAEASICPV*AAVESL
Trigger: CAGACTCTCCACAGCTGCCAACACTGGACAAATTGA...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp CAGCAGCAGTGTGGCCCACGGAGCTTGAACCTGGTGAAGACAGCAAGTAAGCCAAAAGTAGAACACGGGTaGGGCCAGAATTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: QQQCGPRSLNLVKTASKPKVEHG*GQNFFI
Trigger: GATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTT...TGGCTTACTTGCTGTCTTCACCAGGTTCAAGCTCCGTGGGCCACACTGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp CAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCAGTGCAGATGAAGGGTaGTATGAGGCCCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: QQVSHSSRVLRLGNRKELSADEG*YEAPSW
Trigger: CCAGGATGGGGCCTCATACAACCCTTCATCTGCACT...GAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp GTGTCTGTAGAAGAAGCTGCTAACCAAAGCCAGAATGGACAGTGTGATGAGGTCGACCATCAGCACCCCTaGGCGACATCCACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSVEEAANQSQNGQCDEVDHQHP*ATSTSS
Trigger: AGAGGAAGTGGATGTCGCCAAGGGGTGCTGATGGTC...GACCTCATCACACTGTCCATTCTGGCTTTGGTTAGCAGCTTCTTCTACAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS TCA 90 bp GATGCCATCCTCAAGCTGCCACTACAAGCTGGTTTGTGCCTTGCCTaGTCTTGTGAACAAGTCACAGCCCTGTGTCTCCTTTTGAATGCC +
Preference number: 5 (lower is better)
Translates to: DAILKLPLQAGLCLA*SCEQVTALCLLLNA
Trigger: GGCATTCAAAAGGAGACACAGGGCTGTGACTTGTTCACAAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAGGATGGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp GTGAATCCGAGTTCGCACGCTGATTCAGTGAGCTGGGGACAATCTTaGAAGGACCATTTAAAGGAACACCAGTGGTTTGGGGGCACCTAT +
Preference number: 5 (lower is better)
Translates to: VNPSSHADSVSWGQS*KDHLKEHQWFGGTY
Trigger: ATAGGTGCCCCCAAACCACTGGTGTTCCTTTAAATGGTCCTTGCAAGATTGTCCCCAGCTCACTGAATCAGCGTGCGAACTCGGATTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCATCAATTTGTCCAGTGTaGGCAGCTGTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPSICPV*AAVESL
Trigger: CAGACTCTCCACAGCTGCCAACACTGGACAAATTGA...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp GCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAAAGTAGAACACGGGTaGGGCCAGAATTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: AEVCESYLSRLTKGYCRGKVEHG*GQNFFI
Trigger: GATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTT...GCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACACTCAAGCCATGCTCTaGATTTCAGGGCTCTATTGC +
Preference number: 5 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHTQAML*ISGLYC
Trigger: GCAATAGAGCCCTGAAATCAAGAGCATGGCTTGAGT...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS GCA 90 bp AAGAGCTCCTTCTCAGGCCAGAACACCCTCCTCTCCACAAACGTGTaGACACTTGCACGCTCATTAAGCATGTGCACACATCATATTCAC +
Preference number: 5 (lower is better)
Translates to: KSSFSGQNTLLSTNV*TLARSLSMCTHHIH
Trigger: GTGAATATGATGTGTGCACATGCTTAATGAGCGTGCAAGTGTGCACACGTTTGTGGAGAGGAGGGTGTTCTGGCCTGAGAAGGAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504118.1
CDS CCA 90 bp TGTCAGACTGTGTTGTTTTCAGGAGACTTTATGCTGAGGGTCTCCTaGACTGTTCTTCTCTGGAAAGTCTGGCACATTCATCCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: CQTVLFSGDFMLRVS*TVLLWKVWHIHPAP
Trigger: TGGGGCGGGATGAATGTGCCAGACTTTCCAGAGAAGAACAGTCCAGGAGACCCTCAGCATAAAGTCTCCTGAAAACAACACAGTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 90 bp GGAGCTGGGAATGGTGTTCTCTACAAGTCCCTGCAAAGACAGGGCTaGCCTTCAGGACTGTCAGACTGTGTTGTTTTCAGGAGACTTTAT +
Preference number: 5 (lower is better)
Translates to: GAGNGVLYKSLQRQG*PSGLSDCVVFRRLY
Trigger: ATAAAGTCTCCTGAAAACAACACAGTCTGACAGTCCTGAAGGCCAGCCCTGTCTTTGCAGGGACTTGTAGAGAACACCATTCCCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp GGCAGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCTGTTTAGAAACGGTTTaGCTCAAGATGAGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: GRGQPSQGPGKGETEFCICLETV*LKMSPP
Trigger: CGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACA...GATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCATGTTTAGAAACGGTTTaGCTCAAGATGAGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: PRCVRATLADSQKATAEACLETV*LKMSPP
Trigger: CGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACA...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp GGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCACAAAGTAGAACACGGGTaGGGCCAGAATTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: GVNHPKDLAREKLNSVSHKVEHG*GQNFFI
Trigger: GATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTT...GTGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGCGAGGTACAGCAGGATaGTCACCTGGATCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPARGTAG*SPGSGL
Trigger: CAGGCCTGATCCAGGTGACAATCCTGCTGTACCTCG...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGAGGCTGTACACCTTCTaGGCACAGCAGCAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPARLYTF*AQQQCG
Trigger: GCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCT...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp AGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTCCTGCTAAACACAGGCCAGTGTaGAATGGTGTTCATCACCAG +
Preference number: 5 (lower is better)
Translates to: SHSSRVLRLGNRKELLPAKHRPV*NGVHHQ
Trigger: CTGGTGATGAACACCATTCAACACTGGCCTGTGTTT...AGCAGGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS-3UTR CAA 90 bp CAATGTCAAAAGGTCTTTCACCTCCACAAACACAGGCCAGTGCTGAAGACACGGAATGCTGCCAACACCTaGATCTTGGACTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QCQKVFHLHKHRPVLKTRNAANT*ILDFQP
Trigger: AGGCTGGAAGTCCAAGATCAAGGTGTTGGCAGCATT...CCGTGTCTTCAGCACTGGCCTGTGTTTGTGGAGGTGAAAGACCTTTTGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS TCA 90 bp GCCTTCAGGACTGTCAGACTGTGTTGTTTTCAGGAGACTTTATGCTaGGGGTCTCCTGGACTGTTCTTCTCTGGAAAGTCTGGCACATTC +
Preference number: 5 (lower is better)
Translates to: AFRTVRLCCFQETLC*GSPGLFFSGKSGTF
Trigger: GAATGTGCCAGACTTTCCAGAGAAGAACAGTCCAGGAGACCCTCAGCATAAAGTCTCCTGAAAACAACACAGTCTGACAGTCCTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS-3UTR CAA 90 bp ATTCTGTATCCCACTGATGTGAGAGGAAATTCTAATGAGCAAATGGGACCAGCGCACAGCAACTCCACCTaGGCGACATCCACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ILYPTDVRGNSNEQMGPAHSNST*ATSTSS
Trigger: AGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTG...CGCTGGTCCCATTTGCTCATTAGAATTTCCTCTCACATCAGTGGGATACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp CCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAGGCAAATATCGCCATGCCTTaGTACTGCTGTTTAGAAACG +
Preference number: 5 (lower is better)
Translates to: PRCVRATLADSQKATAEANIAMP*YCCLET
Trigger: CGTTTCTAAACAGCAGTACAAAGGCATGGCGATATT...TGCCTCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp GCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTGGGAACAGAAAAGAGCTCCTTGTTTAGAAACGGTTTaGCTCAAGATGAGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: ASKPQLKSSEAWEQKRAPCLETV*LKMSPP
Trigger: CGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACA...AGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360370.9
ENST00000383598.6
CDS-3UTR CAA 90 bp AGGGGTCAACCATCCCAAGGACCTGGCAAGGGAGAAACTGAATTCTGTATCCCAAATATCGCCATGCCTTaGTACTGCTGTTTAGAAACG +
Preference number: 5 (lower is better)
Translates to: RGQPSQGPGKGETEFCIPNIAMP*YCCLET
Trigger: CGTTTCTAAACAGCAGTACAAAGGCATGGCGATATT...TGGGATACAGAATTCAGTTTCTCCCTTGCCAGGTCCTTGGGATGGTTGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS-3UTR CAA 90 bp AGAGCCGAGGTGTGTGAGAGCTACCTTAGCAGACTCACAAAAGGCTACTGCAGAAATATCGCCATGCCTTaGTACTGCTGTTTAGAAACG +
Preference number: 5 (lower is better)
Translates to: RAEVCESYLSRLTKGYCRNIAMP*YCCLET
Trigger: CGTTTCTAAACAGCAGTACAAAGGCATGGCGATATT...TCTGCAGTAGCCTTTTGTGAGTCTGCTAAGGTAGCTCTCACACACCTCGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
CDS GCA 90 bp CCAACACCACATATGACGGGGGTAAATATCGCCATGCCTTTGTACTaGTGTTTAGAAACGGTTTTGCTCAAGATGAGTCCTCCGAAACTG +
Preference number: 5 (lower is better)
Translates to: PTPHMTGVNIAMPLY*CLETVLLKMSPPKL
Trigger: CAGTTTCGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCCCGTCATATGTGGTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS-3UTR CAA 90 bp CAGATACCGACTATCTTTGTGTCTGTAGAAGAAGCTGCTAACCAAAGCCAGAATTCAATTTGTCCAGTGTaGGCAGCTGTGGAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QIPTIFVSVEEAANQSQNSICPV*AAVESL
Trigger: CAGACTCTCCACAGCTGCCAACACTGGACAAATTGA...ATTCTGGCTTTGGTTAGCAGCTTCTTCTACAGACACAAAGATAGTCGGTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507008.5
CDS TCA 90 bp TTTACCCAGGATCTTGTAACTCTAAAAATAATTACAATCACCACCTaGTGCCATCCTCAAGCTGCCACTACAAGCTGGTTTGTGCCTTGC +
Preference number: 5 (lower is better)
Translates to: FTQDLVTLKIITITT*CHPQAATTSWFVPC
Trigger: GCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAGGATGGCATCAGGTGGTGATTGTAATTATTTTTAGAGTTACAAGATCCTGGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 90 bp AACTCTAAAAATAATTACAATCACCACCTGATGCCATCCTCAAGCTaGCACTACAAGCTGGTTTGTGCCTTGCCTGATCTTGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: NSKNNYNHHLMPSSS*HYKLVCALPDLVNK
Trigger: CTTGTTCACAAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAGGATGGCATCAGGTGGTGATTGTAATTATTTTTAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 90 bp AAACACAGGTTCAATTATGAAGTTATCAACTTTTCCTTCTTTCACTaGACCAAAGCAAGGCACGTGGTCTGGAAGATTCACAAAGACACG +
Preference number: 5 (lower is better)
Translates to: KHRFNYEVINFSFFH*TKARHVVWKIHKDT
Trigger: CGTGTCTTTGTGAATCTTCCAGACCACGTGCCTTGCTTTGGTTCAGTGAAAGAAGGAAAAGTTGATAACTTCATAATTGAACCTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp CCCCGCCCCGGCCGGGCGGCCGGACCTCGGACGACTTaGCGCTCCGGGACAGCAGCAGACGCCCAAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PRPGRAAGPRTT*RSGTAADAQAP
Trigger: CGGAGCTTGGGCGTCTGCTGCTGTCCCGGAGCGCCAAGTCGTCCGAGGTCCGGCCGCCCGGCCGGGGCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315891.10
ENST00000346785.9
CDS CCA 72 bp GCTGCCGGGTCTCTGTCCCATCCATCTGGGCACAGCTaGGCGCCTGGCAGCCCTTCCGCCCCAACCCCGCCC +
Preference number: 6 (lower is better)
Translates to: AAGSLSHPSGHS*APGSPSAPTPP
Trigger: GGGCGGGGTTGGGGCGGAAGGGCTGCCAGGCGCCCAGCTGTGCCCAGATGGATGGGACAGAGACCCGGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504035.5
CDS CCA 72 bp GCTGCCGGGTCTCTGTCCCATCCATCTGGGCACAGCTaGGCGCCTGGCAGCCCTCATCTCCCGCGCGCCTTT +
Preference number: 6 (lower is better)
Translates to: AAGSLSHPSGHS*APGSPHLPRAF
Trigger: AAAGGCGCGCGGGAGATGAGGGCTGCCAGGCGCCCAGCTGTGCCCAGATGGATGGGACAGAGACCCGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514891.5
CDS CCA 72 bp GCTGCCGGGTCTCTGTCCCATCCATCTGGGCACAGCTaGGCGCCTGGCAGCCCTATCTGGCCAGATGCAGTG +
Preference number: 6 (lower is better)
Translates to: AAGSLSHPSGHS*APGSPIWPDAV
Trigger: CACTGCATCTGGCCAGATAGGGCTGCCAGGCGCCCAGCTGTGCCCAGATGGATGGGACAGAGACCCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514333.5
CDS TCA 72 bp CAACCCCCGTTGGGAACTGGGCCACACAGCAGAAGGTaGGCGGCTCCCGGCGAGCATCACTGCCTGATCAGG +
Preference number: 6 (lower is better)
Translates to: QPPLGTGPHSRR*AAPGEHHCLIR
Trigger: CCTGATCAGGCAGTGATGCTCGCCGGGAGCCGCTCACCTTCTGCTGTGTGGCCCAGTTCCCAACGGGGGTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509452.1
CDS CCA 72 bp GGACCAGGTGGTCTCCCTGCTAGGCTCAGTCTCCAGTaGCTTGGGGGTCACGCTTTGGCTCTCAGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: GPGGLPARLSLQ*LGGHALALRGP
Trigger: AGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTGAGCCTAGCAGGGAGACCACCTGGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS CCA 72 bp GGGGAGGCTGTACACCTTCTTGGCACAGCAGCAGTGTaGCCCACGGAGCTTGAACCGAGCAGGTCCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GEAVHLLGTAAV*PTELEPSRSPS
Trigger: GCTGGGGGACCTGCTCGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACAGCCTCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000512557.5
CDS CCA 72 bp CGGAGGGCCCCGTGTCTCCCAGGAACAGTCCTGCACTaGGAGCTTAGCGGTGCTGTCCATGGTGCACTGGGA +
Preference number: 6 (lower is better)
Translates to: RRAPCLPGTVLH*ELSGAVHGALG
Trigger: TCCCAGTGCACCATGGACAGCACCGCTAAGCTCCCAGTGCAGGACTGTTCCTGGGAGACACGGGGCCCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 72 bp GCATGCCGGCCCAGGACAGTCCCAGGCCTGCAAACATaGAGGGCACGGTCACCTGAAGGCCTATGGACCAGG +
Preference number: 6 (lower is better)
Translates to: ACRPRTVPGLQT*RARSPEGLWTR
Trigger: CCTGGTCCATAGGCCTTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCCTGGGCCGGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS GCA 72 bp AGCCGGGGCCCATGGGAAGGGGAGAGAGGACGTGGGTaGATGTGGGAGTGTGGTGCTGTGCACTCAACACTG +
Preference number: 6 (lower is better)
Translates to: SRGPWEGERGRG*MWECGAVHSTL
Trigger: CAGTGTTGAGTGCACAGCACCACACTCCCACATGCACCCACGTCCTCTCTCCCCTTCCCATGGGCCCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp CTGGCACATTCATCCCGCCCCATCTGTGGACCAGGCTaGGTCATGGCATCCACCATCCGTCCATGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: LAHSSRPICGPG*VMASTIRPCLR
Trigger: GCGCAGGCATGGACGGATGGTGGATGCCATGACCCAGCCTGGTCCACAGATGGGGCGGGATGAATGTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp GCTTTGGCTCTCAGGGGCCCTGAGAGCTCCATCTTCTaGGGCTACAGGGAGTCCTCCTGTGCTGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: ALALRGPESSIF*GYRESSCAEGV
Trigger: CACCCCCTCAGCACAGGAGGACTCCCTGTAGCCTCAGAAGATGGAGCTCTCAGGGCCCCTGAGAGCCAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS CCA 72 bp CGGTGCTGTCCATGGTGCACTGGGAAGCACGTGCAGTaGTGGCGGATTTCTGGGGGCAGCACTGAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RCCPWCTGKHVQ*WRISGGSTEEV
Trigger: CACCTCTTCAGTGCTGCCCCCAGAAATCCGCCACCACTGCACGTGCTTCCCAGTGCACCATGGACAGCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS CCA 72 bp TGCACTGGGAGCTTAGCGGTGCTGTCCATGGTGCACTaGGAAGCACGTGCAGTGGTGGCGGATTTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: CTGSLAVLSMVH*EARAVVADFWG
Trigger: CCCCCAGAAATCCGCCACCACTGCACGTGCTTCCCAGTGCACCATGGACAGCACCGCTAAGCTCCCAGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS CCA 72 bp ATTCATCCCGCCCCATCTGTGGACCAGGCTGGGTCATaGCATCCACCATCCGTCCATGCCTGCGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: IHPAPSVDQAGS*HPPSVHACAGC
Trigger: ACAGCCTGCGCAGGCATGGACGGATGGTGGATGCCATGACCCAGCCTGGTCCACAGATGGGGCGGGATGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp GCACGTGCAGTGGTGGCGGATTTCTGGGGGCAGCACTaGAGAGGTGAGGCTCACGTTTCCGTGGCTACCATG +
Preference number: 6 (lower is better)
Translates to: ARAVVADFWGQH*RGEAHVSVATM
Trigger: CATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCCAGAAATCCGCCACCACTGCACGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 72 bp TCCAGTCTCGCCCATCTGCACCAGAGGTCTCCAGCGTaGCTGCAGTGGGCGCCCTGGCTAAAACCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SSLAHLHQRSPA*LQWAPWLKPSS
Trigger: AGAGCTTGGTTTTAGCCAGGGCGCCCACTGCAGTCACGCTGGAGACCTCTGGTGCAGATGGGCGAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507008.5
ENST00000508835.5
ENST00000509064.5
CDS GCA 72 bp GTCCAGAAGCATGCCGGCCCAGGACAGTCCCAGGCCTaGAAACATGAAGGGCACGGTCACCTGAAGGCCTAT +
Preference number: 6 (lower is better)
Translates to: VQKHAGPGQSQA*KHEGHGHLKAY
Trigger: ATAGGCCTTCAGGTGACCGTGCCCTTCATGTTTGCAGGCCTGGGACTGTCCTGGGCCGGCATGCTTCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS GCA 72 bp AAGAAAGCTGGAAAGCTGGGTCCAGTCTCGCCCATCTaGACCAGAGGTCTCCAGCGTGACTGCAGTGGGCGC +
Preference number: 6 (lower is better)
Translates to: KKAGKLGPVSPI*TRGLQRDCSGR
Trigger: GCGCCCACTGCAGTCACGCTGGAGACCTCTGGTGCAGATGGGCGAGACTGGACCCAGCTTTCCAGCTTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507008.5
ENST00000508835.5
ENST00000509064.5
CDS GCA 72 bp CCTGCACATGTGCGAGCCCCAAGGAAGGGGTATGTCTaGCCGCATCTGTCTCCCGTGTGTCGCAGATACACG +
Preference number: 6 (lower is better)
Translates to: PAHVRAPRKGYV*PHLSPVCRRYT
Trigger: CGTGTATCTGCGACACACGGGAGACAGATGCGGGCAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp GTGGCCAACGTGTGGCAACTGCTTTCCCTGCACATGTaGGAGCCCCAAGGAAGGGGTATGTCTGCCCGCATC +
Preference number: 6 (lower is better)
Translates to: VANVWQLLSLHM*EPQGRGMSARI
Trigger: GATGCGGGCAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp CTAGGCTCAGTCTCCAGTGGCTTGGGGGTCACGCTTTaGCTCTCAGGGGCCCTGAGAGCTCCATCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LGSVSSGLGVTL*LSGALRAPSSE
Trigger: CTCAGAAGATGGAGCTCTCAGGGCCCCTGAGAGCCAAAGCGTGACCCCCAAGCCACTGGAGACTGAGCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000504035.5
ENST00000505996.1
ENST00000507280.5
ENST00000509064.5
ENST00000509452.1
ENST00000510651.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514333.5
ENST00000514677.5
ENST00000514891.5
CDS CCA 72 bp GGAAGGGGAGAGAGGACGTGGGTGCATGTGGGAGTGTaGTGCTGTGCACTCAACACTGCTGTCCCCCTAACC +
Preference number: 6 (lower is better)
Translates to: GRGERTWVHVGV*CCALNTAVPLT
Trigger: GGTTAGGGGGACAGCAGTGTTGAGTGCACAGCACCACACTCCCACATGCACCCACGTCCTCTCTCCCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp GCTGCCGGGTCTCTGTCCCATCCATCTGGGCACAGCTaGGCGCCTGGCAGCCCTTACACTTTCAGGAGAATT +
Preference number: 6 (lower is better)
Translates to: AAGSLSHPSGHS*APGSPYTFRRI
Trigger: AATTCTCCTGAAAGTGTAAGGGCTGCCAGGCGCCCAGCTGTGCCCAGATGGATGGGACAGAGACCCGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509064.5
CDS CAA 72 bp GCAGTGAGGACACTGCTGGCACACAGCAACTCCACCTaGGCGACATCCACTTCCTCTCGAGACACCACGCCC +
Preference number: 6 (lower is better)
Translates to: AVRTLLAHSNST*ATSTSSRDTTP
Trigger: GGGCGTGGTGTCTCGAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTGTGCCAGCAGTGTCCTCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514677.5
CDS CAA 90 bp GCAAGGAAGGCAGTGAGGACACTGCTGGCACACAGCAACTCCACCTaGGCGACATCCACTTCCTCTCGAGACACCACGCCCAACAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARKAVRTLLAHSNST*ATSTSSRDTTPNSS
Trigger: GCTGCTGTTGGGCGTGGTGTCTCGAGAGGAAGTGGATGTCGCCAAGGTGGAGTTGCTGTGTGCCAGCAGTGTCCTCACTGCCTTCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000508835.5
ENST00000512470.5
ENST00000513464.5
ENST00000513723.5
ENST00000514023.5
ENST00000514677.5
CDS TCA 72 bp AGTGGTGGCGGATTTCTGGGGGCAGCACTGAAGAGGTaGGGCTCACGTTTCCGTGGCTACCATGCCTCCGAA +
Preference number: 6 (lower is better)
Translates to: SGGGFLGAALKR*GSRFRGYHASE
Trigger: TTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCCAGAAATCCGCCACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 72 bp AGAGGCTCCAAAGAGCTCCCACCTCTCTCCACTGTGTaGGGACAGCGAGAAGGGCCGACTGCAGCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: RGSKELPPLSTV*GQREGPTAASK
Trigger: CTTTGAGGCTGCAGTCGGCCCTTCTCGCTGTCCTCACACAGTGGAGAGAGGTGGGAGCTCTTTGGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp CAGGGCCTGGTGCCAAGTCAGCCGAACCATCACTTCTaGGAGGTACAGCAGGATTGTCACCTGGATCAGGCC +
Preference number: 6 (lower is better)
Translates to: QGLVPSQPNHHF*EVQQDCHLDQA
Trigger: GGCCTGATCCAGGTGACAATCCTGCTGTACCTCGCAGAAGTGATGGTTCGGCTGACTTGGCACCAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS GCA 72 bp TCCAGATTCAGCTGGGTGACCACCATGGCCAGGCAATaGACCACGATCCCAGGAGCACGAAGTCAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SRFSWVTTMARQ*TTIPGARSQSL
Trigger: CAGGCTCTGACTTCGTGCTCCTGGGATCGTGGTGCATTGCCTGGCCATGGTGGTCACCCAGCTGAATCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS CCA 72 bp GGGGGCAGCACTGAAGAGGTGAGGCTCACGTTTCCGTaGCTACCATGCCTCCGAAGTCCTCCTTCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: GGSTEEVRLTFP*LPCLRSPPSCS
Trigger: TGAACAGGAAGGAGGACTTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGTGCTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS CCA 72 bp TCTGGAAAGTCTGGCACATTCATCCCGCCCCATCTGTaGACCAGGCTGGGTCATGGCATCCACCATCCGTCC +
Preference number: 6 (lower is better)
Translates to: SGKSGTFIPPHL*TRLGHGIHHPS
Trigger: GGACGGATGGTGGATGCCATGACCCAGCCTGGTCCACAGATGGGGCGGGATGAATGTGCCAGACTTTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp GGGCCAGCACAGATGAGTGAGGAACAAAGGCCAGTGTaGCTCACGGCCTCATTACAGAGACTCTGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GPAQMSEEQRPV*LTASLQRLCQA
Trigger: GGCCTGGCAGAGTCTCTGTAATGAGGCCGTGAGTCACACTGGCCTTTGTTCCTCACTCATCTGTGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS GCA 72 bp GGGGGCAGCGAAGGTGGGGTACATCTAAGACTGCACTaGATTTCTAGGTGCGCTCAGCCAGGCTGTCAGATG +
Preference number: 6 (lower is better)
Translates to: GGSEGGVHLRLH*ISRCAQPGCQM
Trigger: CATCTGACAGCCTGGCTGAGCGCACCTAGAAATGCAGTGCAGTCTTAGATGTACCCCACCTTCGCTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 72 bp CATGCAACGTGGCCAACGTGTGGCAACTGCTTTCCCTaGACATGTGCGAGCCCCAAGGAAGGGGTATGTCTG +
Preference number: 6 (lower is better)
Translates to: HATWPTCGNCFP*TCASPKEGVCL
Trigger: CAGACATACCCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp ATGGACAACCATGCAACGTGGCCAACGTGTGGCAACTaGTTTCCCTGCACATGTGCGAGCCCCAAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: MDNHATWPTCGN*FPCTCASPKEG
Trigger: CCCTTCCTTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp CTCCAAAGATGCTCGGAGCAATGGAACCCCTCGGGGTaGGCTCATGGCCTCCTGTGTTTACTGGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: LQRCSEQWNPSG*AHGLLCLLASS
Trigger: AGAGGATGCCAGTAAACACAGGAGGCCATGAGCTCACCCCGAGGGGTTCCATTGCTCCGAGCATCTTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 72 bp GGCCTGAGAAGGCTGGGAGAGTTGGACTCCACTTTGTaGCCTGTGCACATGATGCTAAGGAGTGACCCGTGG +
Preference number: 6 (lower is better)
Translates to: GLRRLGELDSTL*PVHMMLRSDPW
Trigger: CCACGGGTCACTCCTTAGCATCATGTGCACAGGTCACAAAGTGGAGTCCAACTCTCCCAGCCTTCTCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 72 bp GTTGAATGGTGTTCATCACCAGGCCGGCTGTCATCATaGACAAGCCGGACAGCAGAATGGGCACCACGACCT +
Preference number: 6 (lower is better)
Translates to: VEWCSSPGRLSS*TSRTAEWAPRP
Trigger: AGGTCGTGGTGCCCATTCTGCTGTCCGGCTTGTGCATGATGACAGCCGGCCTGGTGATGAACACCATTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383598.6
ENST00000513723.5
CDS GCA 72 bp AGAGAGGACGTGGGTGCATGTGGGAGTGTGGTGCTGTaGACTCAACACTGCTGTCCCCCTAACCCACATGTT +
Preference number: 6 (lower is better)
Translates to: REDVGACGSVVL*TQHCCPPNPHV
Trigger: AACATGTGGGTTAGGGGGACAGCAGTGTTGAGTGCACAGCACCACACTCCCACATGCACCCACGTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp TGTAAACCTGCAGCCTGCTTTGGCACAGTCCTCTTCTaGCCTACACCCTCCATGCACTGGCACAGGAATGGG +
Preference number: 6 (lower is better)
Translates to: CKPAACFGTVLF*PTPSMHWHRNG
Trigger: CCCATTCCTGTGCCAGTGCATGGAGGGTGTAGGCCAGAAGAGGACTGTGCCAAAGCAGGCTGCAGGTTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp TCTTGCCCTGAAAGCAAAACTCCAGATTCAGCTGGGTaGCCACCATGGCCAGGCAATGCACCACGATCCCAG +
Preference number: 6 (lower is better)
Translates to: SCPESKTPDSAG*PPWPGNAPRSQ
Trigger: CTGGGATCGTGGTGCATTGCCTGGCCATGGTGGTCACCCAGCTGAATCTGGAGTTTTGCTTTCAGGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383598.6
CDS TCA 72 bp CTCCACTTTGTGACCTGTGCACATGATGCTAAGGAGTaGCCCGTGGCTCCCGAGCTCCCAAATCACCAGGAA +
Preference number: 6 (lower is better)
Translates to: LHFVTCAHDAKE*PVAPELPNHQE
Trigger: TTCCTGGTGATTTGGGAGCTCGGGAGCCACGGGTCACTCCTTAGCATCATGTGCACAGGTCACAAAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS CCA 72 bp AAAGTAGAACACGGGTTGGGCCAGAATTTCTTCATCTaGAGGGGCAGGACGCCAGGTGCACTCCACATGTGC +
Preference number: 6 (lower is better)
Translates to: KVEHGLGQNFFI*RGRTPGALHMC
Trigger: GCACATGTGGAGTGCACCTGGCGTCCTGCCCCTCCAGATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CCA 72 bp CATGATGGTGAAGAAAGATTCAGGCAAGACCCCATGTaGGGACCGGGTAAGCTCACAGCTGAAGCCTCGCAG +
Preference number: 6 (lower is better)
Translates to: HDGEERFRQDPM*GPGKLTAEASQ
Trigger: CTGCGAGGCTTCAGCTGTGAGCTTACCCGGTCCCCACATGGGGTCTTGCCTGAATCTTTCTTCACCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383598.6
ENST00000513723.5
CDS CCA 72 bp ATCACCAATGGACAACCATGCAACGTGGCCAACGTGTaGCAACTGCTTTCCCTGCACATGTGCGAGCCCCAA +
Preference number: 6 (lower is better)
Translates to: ITNGQPCNVANV*QLLSLHMCEPQ
Trigger: TTGGGGCTCGCACATGTGCAGGGAAAGCAGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCATTGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp CTCATTAACTTGCCTCCCTCCACAAAGTCCTTGACGTaGAGCCAGGCTGCCCTGACTTTCAGAGCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LINLPPSTKSLT*SQAALTFRASH
Trigger: GTGGGAAGCTCTGAAAGTCAGGGCAGCCTGGCTTCACGTCAAGGACTTTGTGGAGGGAGGCAAGTTAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS TCA 72 bp CAGGTGGGAACTACTGGGTCCCCACTCTTGAGGAGCTaGCATTTTAGCAGGGAGGTGAGGCAGCAAGATGAT +
Preference number: 6 (lower is better)
Translates to: QVGTTGSPLLRS*HFSREVRQQDD
Trigger: ATCATCTTGCTGCCTCACCTCCCTGCTAAAATGTCAGCTCCTCAAGAGTGGGGACCCAGTAGTTCCCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp ACTGAAGAGGTGAGGCTCACGTTTCCGTGGCTACCATaGCTCCGAAGTCCTCCTTCCTGTTCAGACTGTTCA +
Preference number: 6 (lower is better)
Translates to: TEEVRLTFPWLP*LRSPPSCSDCS
Trigger: TGAACAGTCTGAACAGGAAGGAGGACTTCGGAGGCATGGTAGCCACGGAAACGTGAGCCTCACCTCTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506102.5
ENST00000512557.5
CDS GCA 72 bp CCTCCATGCACTGGCACAGGAATGGGCCTGATTAGCTaGCTGGTAGGAATGAGAATAGCCCACATGGGTAAC +
Preference number: 6 (lower is better)
Translates to: PPCTGTGMGLIS*LVGMRIAHMGN
Trigger: GTTACCCATGTGGGCTATTCTCATTCCTACCAGGCAGCTAATCAGGCCCATTCCTGTGCCAGTGCATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp ATGCACAAGCCGGACAGCAGAATGGGCACCACGACCTaGCACATGATGGTGAAGAAAGATTCAGGCAAGACC +
Preference number: 6 (lower is better)
Translates to: MHKPDSRMGTTT*HMMVKKDSGKT
Trigger: GGTCTTGCCTGAATCTTTCTTCACCATCATGTGCCAGGTCGTGGTGCCCATTCTGCTGTCCGGCTTGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383598.6
ENST00000513723.5
CDS TCA 72 bp CAGCATCAGATCCTCATAGGAGCTCAAACCGTATTGTaGACTGCGCACGCAGGGGATCTAGGTTGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: QHQILIGAQTVL*TAHAGDLGCVL
Trigger: GAGCACACAACCTAGATCCCCTGCGTGCGCAGTTCACAATACGGTTTGAGCTCCTATGAGGATCTGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509452.1
CDS CCA 72 bp CACACAGCAGACACCCAGCAACAACTGAATCACCAATaGACAACCATGCAACGTGGCCAACGTGTGGCAACT +
Preference number: 6 (lower is better)
Translates to: HTADTQQQLNHQ*TTMQRGQRVAT
Trigger: AGTTGCCACACGTTGGCCACGTTGCATGGTTGTCCATTGGTGATTCAGTTGTTGCTGGGTGTCTGCTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp GGCTCTGTTCCCATCAGTGGAAATGCCTGTCGGGTGTaGGGAGAGACAGTACACACATGTGTGAACACACAT +
Preference number: 6 (lower is better)
Translates to: GSVPISGNACRV*GETVHTCVNTH
Trigger: ATGTGTGTTCACACATGTGTGTACTGTCTCTCCCCACACCCGACAGGCATTTCCACTGATGGGAACAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CAA 72 bp CCATCCTCAAGCTGCCACTACAAGCTGGTTTGTGCCTaGCCTGATCTTGTGAACAAGTCACAGCCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: PSSSCHYKLVCA*PDLVNKSQPCV
Trigger: GACACAGGGCTGTGACTTGTTCACAAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CAA 90 bp GCTGACATGGAATTGATTTCTGACGTGCAGAAAGTAGAACACGGGTaGGGCCAGAATTTCTTCATCTGGAGGGGCAGGACGCCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: ADMELISDVQKVEHG*GQNFFIWRGRTPGA
Trigger: TGCACCTGGCGTCCTGCCCCTCCAGATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTTCTGCACGTCAGAAATCAATTCCATGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS TCA 72 bp CTCAAGCTGCCACTACAAGCTGGTTTGTGCCTTGCCTaGTCTTGTGAACAAGTCACAGCCCTGTGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: LKLPLQAGLCLA*SCEQVTALCLL
Trigger: AAGGAGACACAGGGCTGTGACTTGTTCACAAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp GCCACTACAAGCTGGTTTGTGCCTTGCCTGATCTTGTaGACAAGTCACAGCCCTGTGTCTCCTTTTGAATGC +
Preference number: 6 (lower is better)
Translates to: ATTSWFVPCLIL*TSHSPVSPFEC
Trigger: GCATTCAAAAGGAGACACAGGGCTGTGACTTGTTCACAAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp ACAATAACCAAAAGGCTCTGTTCCCATCAGTGGAAATaGCTGTCGGGTGTGGGGAGAGACAGTACACACATG +
Preference number: 6 (lower is better)
Translates to: TITKRLCSHQWK*LSGVGRDSTHM
Trigger: CATGTGTGTACTGTCTCTCCCCACACCCGACAGGCATTTCCACTGATGGGAACAGAGCCTTTTGGTTATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp ACAGCAAGTAAGCCACAGCTCAAGAGTTCTGAGGCTTaGGAACAGAAAAGAGCTCCTTCTCAGGCCAGAACA +
Preference number: 6 (lower is better)
Translates to: TASKPQLKSSEA*EQKRAPSQART
Trigger: TGTTCTGGCCTGAGAAGGAGCTCTTTTCTGTTCCCAAGCCTCAGAACTCTTGAGCTGTGGCTTACTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504118.1
CDS CAA 72 bp GAATTGATTTCTGACGTGCAGAAAGTAGAACACGGGTaGGGCCAGAATTTCTTCATCTGGAGGGGCAGGACG +
Preference number: 6 (lower is better)
Translates to: ELISDVQKVEHG*GQNFFIWRGRT
Trigger: CGTCCTGCCCCTCCAGATGAAGAAATTCTGGCCCAACCCGTGTTCTACTTTCTGCACGTCAGAAATCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CAA 72 bp GCCACAGGAGAAACCAATGCTGCCAACACCTTGATCTaGGACTTCCAGCCTCTAGAACTGGAAATAGTCCAG +
Preference number: 6 (lower is better)
Translates to: ATGETNAANTLI*DFQPLELEIVQ
Trigger: CTGGACTATTTCCAGTTCTAGAGGCTGGAAGTCCAAGATCAAGGTGTTGGCAGCATTGGTTTCTCCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505996.1
CDS CAA 90 bp GGGGTAAATATCGCCATGCCTTTGTACTGCTGTTTAGAAACGGTTTaGCTCAAGATGAGTCCTCCGAAACTGCTGATGACCATGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GVNIAMPLYCCLETV*LKMSPPKLLMTMAR
Trigger: CCTGGCCATGGTCATCAGCAGTTTCGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CAA 90 bp TTGCCACCAACACCACATATGACGGGGGTAAATATCGCCATGCCTTaGTACTGCTGTTTAGAAACGGTTTTGCTCAAGATGAGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: LPPTPHMTGVNIAMP*YCCLETVLLKMSPP
Trigger: CGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCCCGTCATATGTGGTGTTGGTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CCA 72 bp ATCTTGCAAGGACCATTTAAAGGAACACCAGTGGTTTaGGGGCACCTATTGAAAACCACTACCCTGAGGCTT +
Preference number: 6 (lower is better)
Translates to: ILQGPFKGTPVV*GHLLKTTTLRL
Trigger: AAGCCTCAGGGTAGTGGTTTTCAATAGGTGCCCCCAAACCACTGGTGTTCCTTTAAATGGTCCTTGCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CAA 72 bp ATCGCCATGCCTTTGTACTGCTGTTTAGAAACGGTTTaGCTCAAGATGAGTCCTCCGAAACTGCTGATGACC +
Preference number: 6 (lower is better)
Translates to: IAMPLYCCLETV*LKMSPPKLLMT
Trigger: GGTCATCAGCAGTTTCGGAGGACTCATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CAA 72 bp CGCAATGCTTCTGAACAGCCATGGACAATACAGATTTaGCTTGTGTTGCTAAGCTTCATCCGATCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: RNASEQPWTIQI*LVLLSFIRSLG
Trigger: GCCCAGAGATCGGATGAAGCTTAGCAACACAAGCAAAATCTGTATTGTCCATGGCTGTTCAGAAGCATTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS TCA 72 bp ACTGTCAGACTGTGTTGTTTTCAGGAGACTTTATGCTaGGGGTCTCCTGGACTGTTCTTCTCTGGAAAGTCT +
Preference number: 6 (lower is better)
Translates to: TVRLCCFQETLC*GSPGLFFSGKS
Trigger: AGACTTTCCAGAGAAGAACAGTCCAGGAGACCCTCAGCATAAAGTCTCCTGAAAACAACACAGTCTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp AATAATTACAATCACCACCTGATGCCATCCTCAAGCTaGCACTACAAGCTGGTTTGTGCCTTGCCTGATCTT +
Preference number: 6 (lower is better)
Translates to: NNYNHHLMPSSS*HYKLVCALPDL
Trigger: AAGATCAGGCAAGGCACAAACCAGCTTGTAGTGGCAGCTTGAGGATGGCATCAGGTGGTGATTGTAATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS CCA 72 bp GTGTTGTTTTCAGGAGACTTTATGCTGAGGGTCTCCTaGACTGTTCTTCTCTGGAAAGTCTGGCACATTCAT +
Preference number: 6 (lower is better)
Translates to: VLFSGDFMLRVS*TVLLWKVWHIH
Trigger: ATGAATGTGCCAGACTTTCCAGAGAAGAACAGTCCAGGAGACCCTCAGCATAAAGTCTCCTGAAAACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5
CDS GCA 72 bp CATATGACGGGGGTAAATATCGCCATGCCTTTGTACTaGTGTTTAGAAACGGTTTTGCTCAAGATGAGTCCT +
Preference number: 6 (lower is better)
Translates to: HMTGVNIAMPLY*CLETVLLKMSP
Trigger: AGGACTCATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCCCGTCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CAA 72 bp ACACCACATATGACGGGGGTAAATATCGCCATGCCTTaGTACTGCTGTTTAGAAACGGTTTTGCTCAAGATG +
Preference number: 6 (lower is better)
Translates to: TPHMTGVNIAMP*YCCLETVLLKM
Trigger: CATCTTGAGCAAAACCGTTTCTAAACAGCAGTACAAAGGCATGGCGATATTTACCCCCGTCATATGTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315891.10
ENST00000346785.9
ENST00000360370.9
ENST00000383598.6
ENST00000506102.5
ENST00000508835.5
ENST00000512557.5
CDS CAA 72 bp TCTGAACAGCCATGGACAATACAGATTTTGCTTGTGTaGCTAAGCTTCATCCGATCTCTGGGCCTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SEQPWTIQILLV*LSFIRSLGLSF
Trigger: AAAACTGAGGCCCAGAGATCGGATGAAGCTTAGCAACACAAGCAAAATCTGTATTGTCCATGGCTGTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512557.5