RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC41A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133065

Ensembl transcript IDs: ENST00000367137.4, ENST00000468057.5, ENST00000484000.1, ENST00000484228.1

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTAGGTCCAGAGGGCAAGAGAACAGAACTGGGATCACAGGGGCCTaGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTC +
Preference number: 1 (lower is better)
Translates to: LRSRGQENRTGITGA*SRCLLSRALKLVHF
Trigger: GAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCAGGCCCCTGTGATCCCAGTTCTGTTCTCTTGCCCTCTGGACCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR TCA 90 bp CACCTGTGGTTGTCCTCAACCTCCAAACCATTCTCCACATACCCATaGCCTGACCCTAATCTCAAAACCCAACCTGGCAAGCTCTGGGGA +
Preference number: 1 (lower is better)
Translates to: HLWLSSTSKPFSTYP*PDPNLKTQPGKLWG
Trigger: TCCCCAGAGCTTGCCAGGTTGGGTTTTGAGATTAGGGTCAGGTCATGGGTATGTGGAGAATGGTTTGGAGGTTGAGGACAACCACAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CCA 90 bp CAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGTTTaGGAGTGTTACTTATTCTTCTGTCCCTCTGTTCAACCAAAACCA +
Preference number: 1 (lower is better)
Translates to: QSFEVGPLLQKYVCV*ECYLFFCPSVQPKP
Trigger: TGGTTTTGGTTGAACAGAGGGACAGAAGAATAAGTAACACTCCCAAACACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR GCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTaGTTATCTCAGGCCATCTGTGTTTCCCAAATTCTTGCTATACAA +
Preference number: 1 (lower is better)
Translates to: TMKLHLVIVSKTYLY*LSQAICVSQILAIQ
Trigger: TTGTATAGCAAGAATTTGGGAAACACAGATGGCCTGAGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTGGGATCACAGGGGCCTaGAGCAGGTGTCTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFGITGA*SRCLLS
Trigger: GGACAGGAGACACCTGCTCCAGGCCCCTGTGATCCC...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCAGAAAATATGGTCTCTaGAGGTCTAGGGCAGGTTCC +
Preference number: 2 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGRKYGL*RSRAGS
Trigger: GGAACCTGCCCTAGACCTCCAGAGACCATATTTTCT...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCGAGAGACAAAGAATCTaGGCCCAGGGAGACAAAGTC +
Preference number: 2 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLERQRI*AQGDKV
Trigger: GACTTTGTCTCCCTGGGCCCAGATTCTTTGTCTCTC...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCTCCTGTCCAGAGCTTTaGAGTTGGTCCACTTCTACA +
Preference number: 2 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLSCPEL*SWSTST
Trigger: TGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGA...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CAA 90 bp TGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCACTaGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: CSSPHHLEAPTMKLH*VIVSKTYLYCLSQA
Trigger: GGCCTGAGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCCGAATAAATGATTGGTaGATGTTTGTGGGTAGAAGC +
Preference number: 2 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGRINDW*MFVGRS
Trigger: GCTTCTACCCACAAACATTCACCAATCATTTATTCG...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR GCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGCAGACAAAACTCCCCTaGTCCAGTCCACATCACCTG +
Preference number: 2 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRQTKLP*SSPHHL
Trigger: CAGGTGATGTGGACTGGAGCAGGGGAGTTTTGTCTG...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCATTCTCCACATACCCATaGCCTGACCCTAATCTCAAA +
Preference number: 2 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAFSTYP*PDPNLK
Trigger: TTTGAGATTAGGGTCAGGTCATGGGTATGTGGAGAA...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGGAAATAAATACTGGTTaGGCAATGGGGCGGTGGCTC +
Preference number: 2 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNREINTG*AMGRWL
Trigger: GAGCCACCGCCCCATTGCTCAACCAGTATTTATTTC...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGTACTCTTTCTGCGAGTaGGAACGCTTAGGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRYSFCE*ERLGPE
Trigger: CTCTGGACCTAAGCGTTCCCACTCGCAGAAAGAGTA...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTGGAGACAAAGTCATTTaGGCCCAGGGAGAATGTGGA +
Preference number: 2 (lower is better)
Translates to: TYNEETFSARFKGAHGLCGDKVI*AQGECG
Trigger: TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCC...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CAA 90 bp TTGTTGATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATaGAAAAGTCAGTCCACCTTACTCTTTCTGCGAGTGGGAACGCTT +
Preference number: 2 (lower is better)
Translates to: LLMLTRPLNKRHVHK*KSQSTLLFLRVGTL
Trigger: AAGCGTTCCCACTCGCAGAAAGAGTAAGGTGGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACATCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAACACAGAGTAGGGGTCTaGAAAGGAGAAAGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: EATDGRVSVEASEREVRKHRVGV*KGERGR
Trigger: TCTGCCTCTTTCTCCTTTCCAGACCCCTACTCTGTG...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGCAGAAGAATCTGGCTTaGAGTAGATGCAAATACTTA +
Preference number: 2 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRQKNLA*SRCKYL
Trigger: TAAGTATTTGCATCTACTTCAAGCCAGATTCTTCTG...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTATTGGTGAATGTTTGTaGGTAGAAGCCAAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: YESKPILLLAARPKVHAVIGECL*VEAKKE
Trigger: CTCTTTCTTGGCTTCTACCCACAAACATTCACCAAT...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGACAATCAACTGGAAATaGTCAGAGGGAGGGGTTGTT +
Preference number: 2 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLTINWK*SEGGVV
Trigger: AACAACCCCTCCCTCTGATCATTTCCAGTTGATTGT...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR TCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGTCCAAGGTGACCAAGTaGTTATGTCCTCAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLSKVTK*LCPQEK
Trigger: TTTCTCCTGAGGACATAATCACTTGGTCACCTTGGA...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAAAGAGGCAGAAGAATCTaGCTTGAAGTAGATGCAAAT +
Preference number: 2 (lower is better)
Translates to: EATDGRVSVEASEREVRKRGRRI*LEVDAN
Trigger: ATTTGCATCTACTTCAAGCCAGATTCTTCTGCCTCT...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR GCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTTGTTTCCCAAATTCTTaGTATACAAACTTGGCTCAA +
Preference number: 2 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCCFPNS*YTNLAQ
Trigger: TTGAGCCAAGTTTGTATAGCAAGAATTTGGGAAACA...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR GCA 72 bp TCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTaGTTTTTAGGCAAAGGAGGTCACTCCAGAGTCTTC +
Preference number: 3 (lower is better)
Translates to: SAHSGPGACLSV*FLGKGGHSRVF
Trigger: GAAGACTCTGGAGTGACCTCCTTTGCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CCA 72 bp GCCCAGGGAGAATGTGGATTTTGGGGAACCAATAGGTaGACATGGGTCAACAGGGAGAAGAGTGCACTGTTC +
Preference number: 3 (lower is better)
Translates to: AQGECGFWGTNR*TWVNREKSALF
Trigger: GAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTCCCCAAAATCCACATTCTCCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGGATCAGAGGGAGGGGTaGTTGATGTTGACCAGGCCA +
Preference number: 3 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRDQREG*LMLTRP
Trigger: TGGCCTGGTCAACATCAACAACCCCTCCCTCTGATC...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAAGGCATGTGCACAAATaGAAAAGTCAGTCCACCTTA +
Preference number: 3 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGRHVHK*KSQSTL
Trigger: TAAGGTGGACTGACTTTTCAATTTGTGCACATGCCT...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGGAGGGGTTGTTGATGTaGACCAGGCCATTGAACAAG +
Preference number: 3 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNREGLLM*TRPLNK
Trigger: CTTGTTCAATGGCCTGGTCAACATCAACAACCCCTC...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR TCA 72 bp AAAGCCTACATCCAAATCCCCAGATCTGTACACGTGTaGCTGCGGATGGAGGCTCCAGTTTTCTCCCAATTT +
Preference number: 3 (lower is better)
Translates to: KAYIQIPRSVHV*LRMEAPVFSQF
Trigger: AAATTGGGAGAAAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR GCA 72 bp GTTAGAGCTGTGTTTCCCTTACCACTGGCTTATCAGTaGCTGGCACAGTACCTAACACATAGTAGGCACTCA +
Preference number: 3 (lower is better)
Translates to: VRAVFPLPLAYQ*LAQYLTHSRHS
Trigger: TGAGTGCCTACTATGTGTTAGGTACTGTGCCAGGCACTGATAAGCCAGTGGTAAGGGAAACACAGCTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAATGAGACACCTGTGGTaGTCCTCAACCTCCAAACCA +
Preference number: 3 (lower is better)
Translates to: TDLYGMTERVILGSDRVQMRHLW*SSTSKP
Trigger: TGGTTTGGAGGTTGAGGACAACCACAGGTGTCTCAT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CCA 72 bp GGAGAATGTGGATTTTGGGGAACCAATAGGTGGACATaGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTT +
Preference number: 3 (lower is better)
Translates to: GECGFWGTNRWT*VNREKSALFHF
Trigger: AAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTCCCCAAAATCCACATTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTGTCTCAAAAACCTACTaGTACTGCTTATCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFVSKTY*YCLSQA
Trigger: GGCCTGAGATAAGCAGTACAAGTAGGTTTTTGAGAC...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTGTGTTTCCCAAATTCTaGCTATACAAACTTGGCTCA +
Preference number: 3 (lower is better)
Translates to: TYNEETFSARFKGAHGLCVFPKF*LYKLGS
Trigger: TGAGCCAAGTTTGTATAGCAAGAATTTGGGAAACAC...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR-3UTR CAA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACCATGAAACTGCACTaGGTGATTGTCTCAAAAACC +
Preference number: 3 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKTMKLH*VIVSKT
Trigger: GGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGCAGCTCCTCAGGCTCTaGTGGTCCCAGCGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKQLLRL*WSQRSV
Trigger: GACGCTGCGCTGGGACCAGCAGAGCCTGAGGAGCTG...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGCGGCTGGCCTGCACTaGCACCAGATTGCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKAAGLH*HQIAPN
Trigger: GTTGGGGGCAATCTGGTGGCAGTGCAGGCCAGCCGC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCTCGGGCCCAACTGGTTaGCTGCCGGTGGCAAACGTG +
Preference number: 4 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGSGPTG*LPVANV
Trigger: CACGTTTGCCACCGGCAGCCAACCAGTTGGGCCCGA...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACTCCTCAGGCTCTGCTaGTCCCAGCGCAGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGLLRLC*SQRSVC
Trigger: GCAGACGCTGCGCTGGGACCAGCAGAGCCTGAGGAG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAGTACCAGGGAGGCAATaGAGGCTGTGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGVPGRQ*RLWPRC
Trigger: GCAGCGTGGCCACAGCCTTCATTGCCTCCCTGGTAC...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGTCCCGTTCAGTTGGTaGACGTCCTTCGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKVPFSW*TSFGSG
Trigger: GCCAGAGCCGAAGGACGTCCACCAACTGAACGGGAC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCACAACACCTCCCTTGTaGCTGGACTTCGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGTTPPL*LDFVGP
Trigger: TGGCCCGACGAAGTCCAGCCACAAGGGAGGTGTTGT...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCTTCTGGGGTGCCCTCTaGAGTGGCCCCTCTTCCGTA +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLFWGAL*SGPSSV
Trigger: TACGGAAGAGGGGCCACTTCAGAGGGCACCCCAGAA...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCTCACGAGAATCAGTGTaGAACACCTGCCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGSRESV*NTCPSP
Trigger: AGGCGAGGGGCAGGTGTTCCACACTGATTCTCGTGA...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAACTCCCCTGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCATCCTTCCCGCTCCTTTaGCTGGGCTCTGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KTPLLQSTSPGGTHHETASFPLL*LGSVSF
Trigger: GAAGCTGACAGAGCCCAGCCAAAGGAGCGGGAAGGA...TGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCAGGGGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCTCACTTTCGTTGCTCTaGCTCCCGTTCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGSLSLL*LPFSSR
Trigger: CCTGCTGGAGAACGGGAGCCAGAGCAACGAAAGTGA...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGAACACCAGGTGTCCTaGGACCACGAGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKEHQVS*DHEEEE
Trigger: CTCTTCCTCCTCGTGGTCCCAGGACACCTGGTGTTC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGTTTAAAAGGAGGTCTCCTTaGGCGGGGAAGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: TSKSPDLYTCDCGWRLQFKRRSP*AGKVAQ
Trigger: CTGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTT...AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGCCCCCAATCGCTTCTTaGCCGCGGACTCGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRPPIAS*PRTRAQ
Trigger: TTGGGCCCGAGTCCGCGGGCAAGAAGCGATTGGGGG...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACGATGTCCAACACCATaGCAGCAGCCACGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGRCPTP*QQPRSQ
Trigger: TTGGGACCGTGGCTGCTGGCATGGTGTTGGACATCG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAAGTGTGAGGGTGGTGTaGCCGCCCTGCATACAGCTG +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTASVRVV*PPCIQL
Trigger: CAGCTGTATGCAGGGCGGGCACACCACCCTCACACT...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCGAACCCCCTTGGCGTTaGCCCGAGACTCAATCACCA +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLEPPWR*PETQSP
Trigger: TGGTGATTGAGTCTCGGGCCAACGCCAAGGGGGTTC...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAACTCCCCTGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCAGCCTGCCAGGAGGAATaGAAACAGTACTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: KTPLLQSTSPGGTHHETAACQEE*KQYLQP
Trigger: GGGCTGCAAGTACTGTTTCCATTCCTCCTGGCAGGC...TGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCAGGGGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAACCGTGGCCTGCACCTaGATGAGGGCCATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTATVACT*MRAMFP
Trigger: TGGGAACATGGCCCTCATCCAGGTGCAGGCCACGGT...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAACTCCCCTGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCAACGTGTGACTGCGGATaGAGGCTCCAGTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KTPLLQSTSPGGTHHETATCDCG*RLQFSP
Trigger: GGGAGAAAACTGGAGCCTCCATCCGCAGTCACACGT...TGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCAGGGGAGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACGCCCTGCATACAGCTaGTGGTGTAGAGGAACACCA +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGRPAYS*WCRGTP
Trigger: TGGTGTTCCTCTACACCATCAGCTGTATGCAGGGCG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAGCTACATTTCGCTTCTaGGTTACAGCGAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAATFRF*VTARPP
Trigger: CGGCGGCCTCGCTGTAACGCAGAAGCGAAATGTAGC...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGGCATTCCATTCATGTaGAGGAAGGTGGAGATGCGG +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKGIPFM*RKVEMR
Trigger: CCGCATCTCCACCTTCCTGCACATGAATGGAATGCC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGCCTACAGTCCTCCTCTaGTCACTCAGGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRPTVLL*SLRAWG
Trigger: GCCCCAGGCCCTGAGTGAGCAGAGGAGGACTGTAGG...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTAACACAGTGCCAGCCTaGGGCTGCGGCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: TYNEETFSARFKGAHGLCNTVPA*GCGSFP
Trigger: CGGGAAGGAGCCGCAGCCCCAGGCTGGCACTGTGTT...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTCCTCCCGAACCCCCTTaGCGTTGGCCCGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSPPEPP*RWPETQ
Trigger: TTGAGTCTCGGGCCAACGCCAAGGGGGTTCGGGAGG...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCTCTCAAAACCCAACCTaGCAAGCTCTGGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGSQNPT*QALGKV
Trigger: TACCTTCCCCAGAGCTTGCCAGGTTGGGTTTTGAGA...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGAACTTAGTCTTGGGGTaGACCCAGGCTTGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRNLVLG*TQAWAP
Trigger: CGGCGCCCAAGCCTGGGTTCACCCCAAGACTAAGTT...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCATGTCTCGGTCCCCTATaGGCCAGAGAACATGGAAGC +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTACLGPL*AREHGS
Trigger: GCTTCCATGTTCTCTGGCTCATAGGGGACCGAGACA...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAGGATGGGGAAAATGTTaGGTGACCAAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGGWGKC*VTKLVP
Trigger: GGGGACTAGCTTGGTCACTCAACATTTTCCCCATCC...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AAAACTCCCCTGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCAGAAATAAATACTGGTTaGGCAATGGGGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KTPLLQSTSPGGTHHETAEINTG*AMGRWL
Trigger: GAGCCACCGCCCCATTGCTCAACCAGTATTTATTTC...TGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCAGGGGAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAACCCACCACCGTGGCCTaGACCTGGATGAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQPTTVA*TWMRAM
Trigger: CATGGCCCTCATCCAGGTGCAGGCCACGGTGGTGGG...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTCGGCCCCACATCCAGTaGACCATCCAGTCTGCGATG +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSRPHIQ*TIQSAM
Trigger: CATCGCAGACTGGATGGTGCACTGGATGTGGGGCCG...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGCCATCCCAGCAAAGTTaGGGTCTGAGACAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKPSQQS*GLRQSC
Trigger: ACAAGACTGTCTCAGACCCCAACTTTGCTGGGATGG...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCTGGGGAACCAATAGGTaGACATGGGTCAACAGGGAG +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLWGTNR*TWVNRE
Trigger: CTCCCTGTTGACCCATGTCCACCTATTGGTTCCCCA...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGCACAGAGTAGGGGTCTaGAAAGGAGAAAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKHRVGV*KGERGR
Trigger: TCTGCCTCTTTCTCCTTTCCAGACCCCTACTCTGTG...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTGAAGGGGCGAGTGACTaGGGTAGGGGTGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFEGASD*GRGGWR
Trigger: TCTCCAGCCACCCCTACCCCAGTCACTCGCCCCTTC...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCGGTAGAGTCCCCAGCTaGTGCCTGAGAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSGRVPS*CLRAAP
Trigger: TGGCGCTGCTCTCAGGCATCAGCTGGGGACTCTACC...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATAGAAGAGGACCCGGGCTaGGCGAGAATTCACATCAGG +
Preference number: 4 (lower is better)
Translates to: RETKSFGPRENVDFGEPIEEDPG*ARIHIR
Trigger: CCTGATGTGAATTCTCGCTCAGCCCGGGTCCTCTTC...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTTTGGAGGTGGGCCCTTaGGGCTACAGATGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSLEVGP*GYRWKG
Trigger: ACCCTTCCATCTGTAGCCTCAAGGGCCCACCTCCAA...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTTCAGTGTGGAACACCTaGCCCTCGCCTGGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFSVWNT*PSPGRK
Trigger: CTTCCTCCCAGGCGAGGGGCAGGTGTTCCACACTGA...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTTCCCAGCGCAGCGTCTaGCGTCTTTCCCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSSQRSV*RLSLLF
Trigger: GAAGAGAAGGGAAAGACGGCAGACGCTGCGCTGGGA...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACCACCTTACTCTTTCTaGGAGTGGGAACGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGPPYSF*EWERLG
Trigger: ACCTAAGCGTTCCCACTCGCAGAAAGAGTAAGGTGG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGGAGAGCTCATCTTaGGGAGGCTGCATATTTGCT +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLQESSS*GGCIFA
Trigger: AGCAAATATGCAGCCTCCGCAAGATGAGCTCTCCTG...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAAGAGTCTTCTGGGACTaGCTGGCCAAATTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGRVFWD*LAKFQR
Trigger: TCTCTGGAATTTGGCCAGGCAGTCCCAGAAGACTCT...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGGACTCGGGCCCAACTaGTTGGCTGCCGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCGLGPN*LAAGGK
Trigger: TTTGCCACCGGCAGCCAACCAGTTGGGCCCGAGTCC...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGGGGGCGCCTGGCAAGTaGCAGCGTGGCCCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLGAPGK*QRGPWS
Trigger: AGACCACGGGCCACGCTGCCACTTGCCAGGCGCCCC...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAAGACGACGGCTGCGATaGACGCCAGGAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQRRRLR*TPGSPP
Trigger: TGGTGGGCTTCCTGGCGTCCATCGCAGCCGTCGTCT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGTTTTGTGGCCACGTTGTCTaGGTTGATCCCAATCTTGCG +
Preference number: 4 (lower is better)
Translates to: TSKSPDLYTCDCGWRLQFCGHVV*VDPNLA
Trigger: CGCAAGATTGGGATCAACCCAGACAACGTGGCCACA...AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATAAGGTGGTACAAGGACTaGGACAGCGGCGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RETKSFGPRENVDFGEPIRWYKD*DSGEEL
Trigger: AAGCTCCTCGCCGCTGTCCCAGTCCTTGTACCACCT...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCAGGAGAATCAGCACCTaGAGCAGTGCAGCTGTCATA +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLRRIST*SSAAVI
Trigger: TATGACAGCTGCACTGCTCCAGGTGCTGATTCTCCT...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGGGATCACAGGGGCCTaGAGCAGGTGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCGITGA*SRCLLS
Trigger: GGACAGGAGACACCTGCTCCAGGCCCCTGTGATCCC...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAGGAGACAAAGTCATTTaGGCCCAGGGAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGGDKVI*AQGECG
Trigger: TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCC...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGCAATGAGACACCTGTaGTTGTCCTCAACCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VALAVVSTAQSRGLERRKAMRHL*LSSTSK
Trigger: TTTGGAGGTTGAGGACAACCACAGGTGTCTCATTGC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGGCCTTCCCTTGGAGGTaGGCCCTTGAGGCTACAGAT +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRAFPWR*ALEATD
Trigger: ATCTGTAGCCTCAAGGGCCCACCTCCAAGGGAAGGC...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATAAGATCTGTACACGTGTaGCTGCGGATGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RETKSFGPRENVDFGEPIRSVHV*LRMEAP
Trigger: TGGAGCCTCCATCCGCAGTCACACGTGTACAGATCT...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGCAGCGGCGAGGAGCTTaGTCAGAGTTCTCTCCGGGC +
Preference number: 4 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKQRRGA*SEFSPG
Trigger: GCCCGGAGAGAACTCTGAGCAAGCTCCTCGCCGCTG...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTTCCCGCTCCTTTGGCTaGGCTCTGTCAGCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCSRSFG*ALSASH
Trigger: GTGGGAAGCTGACAGAGCCCAGCCAAAGGAGCGGGA...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGTCCGCCAGAGCTCCTTaGGTGTGTCCATGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRSARAP*VCPCVQ
Trigger: TTGGACACATGGACACACCCAAGGAGCTCTGGCGGA...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CAA 72 bp GAGACAAAGAATCTGGGCCCAGGGAGACAAAGTCATTaGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: ETKNLGPGRQSH*GPGRMWILGNQ
Trigger: TTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCACCAGCTCTGTGCTTaGAGAAAAAGTATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLHQLCA*RKSICP
Trigger: AGGACAGATACTTTTTCTTCAAGCACAGAGCTGGTG...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTAGCCCCATCAAGCACTaGAGCCGCAAGCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YESKPILLLAARPKVHAVSPIKH*SRKLGR
Trigger: TCTTCCCAGCTTGCGGCTTCAGTGCTTGATGGGGCT...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAAGGCCACGGTCTGTGCTaGCGTCGTCACTTTCGTTGC +
Preference number: 4 (lower is better)
Translates to: EATDGRVSVEASEREVRKGHGLC*RRHFRC
Trigger: GCAACGAAAGTGACGACGTCAGCACAGACCGTGGCC...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAATTTCCAGGTTCCCTTTaGGCCCCAGCAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EATDGRVSVEASEREVRKFPGSL*APAAQA
Trigger: TGCCTGCGCTGCTGGGGCTCAAAGGGAACCTGGAAA...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAAGGCGTGCGGAATACTaGAGTGGCCATCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQRRAEY*SGHQGS
Trigger: GGATCCCTGATGGCCACTTCAGTATTCCGCACGCCT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTTCTTTCAGAACACAGTaGCAGCCTGGGGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCSFRTQ*QPGAAA
Trigger: AGCCGCAGCCCCAGGCTGGCACTGTGTTCTGAAAGA...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTAACCAAATTCTGGGGTaGCCTCTGAAGTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFNQILG*PLKWPL
Trigger: GAGGGGCCACTTCAGAGGGCACCCCAGAATTTGGTT...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AAAACTCCCCTGCTCCAGTCCACATCACCTGGAGGCACCCACCATGAAACTGCAAACCCACCAGCTCTGTaGTTGAAGAAAAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: KTPLLQSTSPGGTHHETANPPAL*LKKKYL
Trigger: CAGATACTTTTTCTTCAAGCACAGAGCTGGTGGGTT...TGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGGACTGGAGCAGGGGAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGCAATGTTGGCTGCAGTaGAAAGCCTTGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRQCWLQ*KALMPG
Trigger: CCCTGGCATCAAGGCTTTCCACTGCAGCCAACATTG...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGAGGTGGAGATGCGGCTaGCCTGCACTGCCACCAGAT +
Preference number: 4 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKRWRCG*PALPPD
Trigger: ATCTGGTGGCAGTGCAGGCCAGCCGCATCTCCACCT...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGTTTACCAATAGGTGGACATaGGTCAACAGGGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: TSKSPDLYTCDCGWRLQFTNRWT*VNREKS
Trigger: ACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGT...AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCTGCTCACTCAGGGCCTaGGGCATGCCTATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSCSLRA*GMPICL
Trigger: CAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCA...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CAA 72 bp TCCTCAGGAGAAATGGCAGCAATGAGACACCTGTGGTaGTCCTCAACCTCCAAACCATTCTCCACATACCCA +
Preference number: 4 (lower is better)
Translates to: SSGEMAAMRHLW*SSTSKPFSTYP
Trigger: TGGGTATGTGGAGAATGGTTTGGAGGTTGAGGACAACCACAGGTGTCTCATTGCTGCCATTTCTCCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCAGGCACTGCAAAAACTaGTCCACCAACAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSRHCKN*STNRQP
Trigger: GGGCTGCCTGTTGGTGGATCAGTTTTTGCAGTGCCT...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCGCGCAGGCACTAGGATaGAGACCTCTGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSAQALG*RPLSPS
Trigger: AGAAGGTGACAGAGGTCTTCATCCTAGTGCCTGCGC...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTCCACGTTGTCTGGGTTaGTCCCAATCTTGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: YESKPILLLAARPKVHAVPRCLG*SQSCES
Trigger: GCTCTCGCAAGATTGGGATCAACCCAGACAACGTGG...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAAGAGAACATGGAAGCTaGGTGCTAGGAGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQREHGS*VLGAQC
Trigger: GCACTGGGCTCCTAGCACTCAGCTTCCATGTTCTCT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTCGTCGTCACTTTCGTTaGTCTGGCTCCCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YESKPILLLAARPKVHAVRRHFR*SGSRSP
Trigger: TGGAGAACGGGAGCCAGAGCAACGAAAGTGACGACG...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTCACGGTCCCAAAGCCTaGCAGGAGGAATGGAAACAG +
Preference number: 4 (lower is better)
Translates to: YESKPILLLAARPKVHAVHGPKA*QEEWKQ
Trigger: CTGTTTCCATTCCTCCTGGCAGGCTTTGGGACCGTG...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTGCAGGAAGGTGGAGATaGGGCTGGCCTGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSAGRWR*GWPALP
Trigger: TGGCAGTGCAGGCCAGCCGCATCTCCACCTTCCTGC...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTCTGTACACGTGTGACTaGGGATGGAGGCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFLYTCD*GWRLQF
Trigger: AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAG...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGTTTACCAATATTGCTCCTTaGAGCCAGGCCAAAAGTACA +
Preference number: 4 (lower is better)
Translates to: TSKSPDLYTCDCGWRLQFTNIAP*SQAKST
Trigger: TGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT...AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAACCAGTCCCGTTCAGTTaGTGGACGTCCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: EATDGRVSVEASEREVRKPVPFS*WTSFGS
Trigger: AGAGCCGAAGGACGTCCACCAACTGAACGGGACTGG...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGCACCTCCCTTGTGGCTaGACTTCGTCGGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLHLPCG*TSSGQH
Trigger: GTGCTGGCCCGACGAAGTCCAGCCACAAGGGAGGTG...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAGGAGAATGTGGATTTTaGGGAACCAATAGGTGGACA +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAGECGF*GTNRWT
Trigger: TGTCCACCTATTGGTTCCCCAAAATCCACATTCTCC...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTTCTTCTGGGACTGCCTaGCCAAATTCCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSSSGTA*PNSRDE
Trigger: CTCATCTCTGGAATTTGGCCAGGCAGTCCCAGAAGA...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTAGGGGTGCAGATGCCTaGCTCCAACCCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSRGADA*LQPTSS
Trigger: AGAGCTGGTGGGTTGGAGTCAGGCATCTGCACCCCT...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACGAATAAATGATTGGTaGATGTTTGTGGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGRINDW*MFVGRS
Trigger: GCTTCTACCCACAAACATTCACCAATCATTTATTCG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCACAGAGGAGTTGGTTTTaGTGCCTGTACAAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAQRSWF*CLYKKN
Trigger: ATTCTTCTTGTACAGGCATCAAAACCAACTCCTCTG...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATACAGCACCTGGAGCAGTaGAGCTGTCATATAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RETKSFGPRENVDFGEPIQHLEQ*SCHIED
Trigger: ATCTTCTATATGACAGCTGCACTGCTCCAGGTGCTG...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAAGGGTGCCCTCTGAAGTaGCCCCTCTTCCGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: EATDGRVSVEASEREVRKGCPLK*PLFRKK
Trigger: CTTTTTACGGAAGAGGGGCCACTTCAGAGGGCACCC...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTCCATGTGTCCAATGTTaGCTGCAGTGGAAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVPCVQC*LQWKAL
Trigger: CAAGGCTTTCCACTGCAGCCAACATTGGACACATGG...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTCCAGGCTGGCAGCAATaGGTGTGGCCACGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSPGWQQ*VWPRCL
Trigger: CAGACAACGTGGCCACACCCATTGCTGCCAGCCTGG...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTGAAAGCACACACCAGTaGGTAGATGTATCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TYNEETFSARFKGAHGLCESTHQ*VDVSPV
Trigger: CACTGGCGATACATCTACCCACTGGTGTGTGCTTTC...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTTACTCTTTCTGCGAGTaGGAACGCTTAGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVYSFCE*ERLGPE
Trigger: CTCTGGACCTAAGCGTTCCCACTCGCAGAAAGAGTA...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCATTGGTGAATGTTTGTaGGTAGAAGCCAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLIGECL*VEAKKE
Trigger: CTCTTTCTTGGCTTCTACCCACAAACATTCACCAAT...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTATACTGGTTGAGCAATaGGGCGGTGGCTCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCILVEQ*GGGSSC
Trigger: ACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTAT...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTAATTCACATCAGGGCTaGAGAAGGTGGTACAAGGAC +
Preference number: 4 (lower is better)
Translates to: TYNEETFSARFKGAHGLCNSHQG*RRWYKD
Trigger: GTCCTTGTACCACCTTCTTCAGCCCTGATGTGAATT...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTTCCTGTCCAGAGCTTTaGAGTTGGTCCACTTCTACA +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFSCPEL*SWSTST
Trigger: TGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGA...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp CTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGTTTGGGGTGCACCATCCAGTCTaGGATGTACAGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSRALKLVHFYKSMSVFGVHHPV*DVQENQ
Trigger: CTGATTCTCCTGTACATCGCAGACTGGATGGTGCAC...CCCAAACACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTGCATGCCTATCTGTCTaGTTTTTAGGCAAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSACLSV*FLGKGG
Trigger: ACCTCCTTTGCCTAAAAAGCAGACAGATAGGCATGC...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTTCAGGGCCTGGGGCATaGCTATCTGTCTGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: YESKPILLLAARPKVHAVSGPGA*LSVCFL
Trigger: TAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGA...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp TGGAGCAGGTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTAACTTCCTCCCTTCCTaGGAAGAGCTAATACCTCTT +
Preference number: 4 (lower is better)
Translates to: WSRCLLSRALKLVHFYKSNFLPS*EELIPL
Trigger: AAGAGGTATTAGCTCTTCCCAGGAAGGGAGGAAGTT...ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACACCTGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTCAGAGCAGTCAAGTATaGGATGGAGAAGTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCQSSQV*DGEVVR
Trigger: CCGGACAACTTCTCCATCCCATACTTGACTGCTCTG...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAATGAGCCAGAGAACATaGAAGCTGAGTGCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQMSQRT*KLSARS
Trigger: GCTCCTAGCACTCAGCTTCCATGTTCTCTGGCTCAT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGTTTGGGGAGAGACAAAGAATCTaGGCCCAGGGAGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: LSRALKLVHFYKSMSVFGERQRI*AQGDKV
Trigger: GACTTTGTCTCCCTGGGCCCAGATTCTTTGTCTCTC...CCCAAACACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTAGAAAATATGGTCTCTaGAGGTCTAGGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TYNEETFSARFKGAHGLCRKYGL*RSRAGS
Trigger: GGAACCTGCCCTAGACCTCCAGAGACCATATTTTCT...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGCACTCCAGAGTCTTCTaGGACTGCCTGGCCAAATTC +
Preference number: 4 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKHSRVF*DCLAKF
Trigger: GAATTTGGCCAGGCAGTCCCAGAAGACTCTGGAGTG...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
3UTR CAA 72 bp CCACATCACCTGGAGGCACCCACCATGAAACTGCACTaGGTGATTGTCTCAAAAACCTACTTGTACTGCTTA +
Preference number: 4 (lower is better)
Translates to: PHHLEAPTMKLH*VIVSKTYLYCL
Trigger: TAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGTGGGTGCCTCCAGGTGATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTTTCTCCACATACCCATaGCCTGACCCTAATCTCAAA +
Preference number: 4 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVFSTYP*PDPNLK
Trigger: TTTGAGATTAGGGTCAGGTCATGGGTATGTGGAGAA...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAACAGGCCAAAAGTACATaGAGTTGGTACAATCGGGGA +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQQAKST*SWYNRG
Trigger: TCCCCGATTGTACCAACTGCATGTACTTTTGGCCTG...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTGACGTCCTTCGGCTCTaGCTTAGAGGACATGACAGG +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSDVLRL*LRGHDR
Trigger: CCTGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTC...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAGTTAATGAATTCTGTTaGACACAACTCCAACTAGAA +
Preference number: 4 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGVNEFC*TQLQLE
Trigger: TTCTAGTTGGAGTTGTGTCCAACAGAATTCATTAAC...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAACAATCAACTGGAAATaGTCAGAGGGAGGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQTINWK*SEGGVV
Trigger: AACAACCCCTCCCTCTGATCATTTCCAGTTGATTGT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTTCCAAGGTGACCAAGTaGTTATGTCCTCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCSKVTK*LCPQEK
Trigger: TTTCTCCTGAGGACATAATCACTTGGTCACCTTGGA...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAAATGGAAACAGTACTTaGAGCCCGATGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TDLYGMTERVILGSDRVQNGNST*SPMEKE
Trigger: CTCCTTTTCCATCGGGCTGCAAGTACTGTTTCCATT...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGACCTCTGTCACCTTCTaGAAGACTTCCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLTSVTF*KTSQCC
Trigger: GCAGCACTGGGAAGTCTTCCAGAAGGTGACAGAGGT...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGTCTAGGGCAGGTTCCTaGGATAAGGTGCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLSRAGS*DKVQCW
Trigger: CCAACACTGCACCTTATCCCAGGAACCTGCCCTAGA...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGGGCATGTGCACAAATTaGAAAGTCAGTCCACCTTAC +
Preference number: 4 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKGMCTN*KVSPPY
Trigger: GTAAGGTGGACTGACTTTTCAATTTGTGCACATGCC...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTATCGGGGAAAAGAAATaGAACTTCCATGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVIGEKK*NFHESH
Trigger: GTGACTTTCATGGAAGTTTCATTTCTTTTCCCCGAT...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTCAGTCAAGTATGGGATaGAGAAGTTGTCCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSQSSMG*RSCPGP
Trigger: TGGACCCGGACAACTTCTCCATCCCATACTTGACTG...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR TCA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTCAGAAGAATCTGGCTTaGAGTAGATGCAAATACTTA +
Preference number: 4 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFQKNLA*SRCKYL
Trigger: TAAGTATTTGCATCTACTTCAAGCCAGATTCTTCTG...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGGTTCCTGGGATAAGGTaGAGTGTTGGTAGAAACAGG +
Preference number: 4 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLVPGIR*SVGRNR
Trigger: CCTGTTTCTACCAACACTGCACCTTATCCCAGGAAC...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACTTACAACGAGGAAACTTTCTCTGCCAGATTCAAAGGGGCACATGGCCTTTGTTGTTTCCCAAATTCTTaGTATACAAACTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TYNEETFSARFKGAHGLCCFPNS*YTNLAQ
Trigger: TTGAGCCAAGTTTGTATAGCAAGAATTTGGGAAACA...ACAAAGGCCATGTGCCCCTTTGAATCTGGCAGAGAAAGTTTCCTCGTTGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR GCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTAGAGTAAACCAATATTaGTCCTTGCAGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSRVNQY*SLQPGQ
Trigger: TTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCT...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CCA 90 bp ACCATGAAACTGCACTTGGTGATTGTCTCAAAAACCTACTTGTACTGCTTATCTAGAGGCAGAAGAATCTaGCTTGAAGTAGATGCAAAT +
Preference number: 4 (lower is better)
Translates to: TMKLHLVIVSKTYLYCLSRGRRI*LEVDAN
Trigger: ATTTGCATCTACTTCAAGCCAGATTCTTCTGCCTCT...AGATAAGCAGTACAAGTAGGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 90 bp AGGCGAGCGTCCAGCCGCGACACCCGGCTCGCTACATTTCGCTTCTaGGTTACAGCGAGGCCGCCGCTCCGCTTCCACGCGGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RRASSRDTRLATFRF*VTARPPLRFHAGEV
Trigger: CACCTCCCCCGCGTGGAAGCGGAGCGGCGGCCTCGCTGTAACGCAGAAGCGAAATGTAGCGAGCCGGGTGTCGCGGCTGGACGCTCGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 90 bp GGCGCAGGGCCACGGTCTGTGCTGACGTCGTCACTTTCGTTGCTCTaGCTCCCGTTCTCCAGCAGGGCGTCCTCCTCCCGAACCCCCTTG +
Preference number: 5 (lower is better)
Translates to: GAGPRSVLTSSLSLL*LPFSSRASSSRTPL
Trigger: CAAGGGGGTTCGGGAGGAGGACGCCCTGCTGGAGAACGGGAGCCAGAGCAACGAAAGTGACGACGTCAGCACAGACCGTGGCCCTGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 90 bp CGGAATACTGAAGTGGCCATCAGGGATCCAGCCAAAGACGACGGCTaGGATGGACGCCAGGAAGCCCACCACCGTGGCCTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: RNTEVAIRDPAKDDG*DGRQEAHHRGLHLD
Trigger: ATCCAGGTGCAGGCCACGGTGGTGGGCTTCCTGGCGTCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTCAGTATTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS GCA 90 bp GTCCGGGTCCAGGCCCCGGCCCCACATCCAGTGCACCATCCAGTCTaGGATGTACAGGAGAATCAGCACCTGGAGCAGTGCAGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: VRVQAPAPHPVHHPV*DVQENQHLEQCSCH
Trigger: ATGACAGCTGCACTGCTCCAGGTGCTGATTCTCCTGTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGGGGCCTGGACCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS GCA 90 bp GGGATGGAGAAGTTGTCCGGGTCCAGGCCCCGGCCCCACATCCAGTaGACCATCCAGTCTGCGATGTACAGGAGAATCAGCACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GMEKLSGSRPRPHIQ*TIQSAMYRRISTWS
Trigger: GCTCCAGGTGCTGATTCTCCTGTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGGGGCCTGGACCCGGACAACTTCTCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS TCA 90 bp GACTTCTCCACCAGTAGAGCATGGGCACCTGCCTTCCTACACAGCTaGGGGGATGAAGCCCTGCCTTGCCTCACCGCCTCACCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: DFSTSRAWAPAFLHS*GDEALPCLTASPPL
Trigger: GAGAGGAGGTGAGGCGGTGAGGCAAGGCAGGGCTTCATCCCCTCAGCTGTGTAGGAAGGCAGGTGCCCATGCTCTACTGGTGGAGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 90 bp GAGCATGGGCACCTGCCTTCCTACACAGCTGAGGGGATGAAGCCCTaGCTTGCCTCACCGCCTCACCTCCTCTCCAATGCTCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: EHGHLPSYTAEGMKP*LASPPHLLSNALSR
Trigger: TCTGCTCAGAGCATTGGAGAGGAGGTGAGGCGGTGAGGCAAGGCAGGGCTTCATCCCCTCAGCTGTGTAGGAAGGCAGGTGCCCATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 90 bp GGCAGAAGGGCCAGTCCCGTTCAGTTGGTGGACGTCCTTCGGCTCTaGCTTAGAGGACATGACAGGCACGGAGGAGGGGAAGGGAGAACT +
Preference number: 5 (lower is better)
Translates to: GRRASPVQLVDVLRL*LRGHDRHGGGEGRT
Trigger: AGTTCTCCCTTCCCCTCCTCCGTGCCTGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTCCACCAACTGAACGGGACTGGCCCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CCA 90 bp TCTGAAGAGCAGGGAGAGGCAGAAGGGCCAGTCCCGTTCAGTTGGTaGACGTCCTTCGGCTCTGGCTTAGAGGACATGACAGGCACGGAG +
Preference number: 5 (lower is better)
Translates to: SEEQGEAEGPVPFSW*TSFGSGLEDMTGTE
Trigger: CTCCGTGCCTGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTCCACCAACTGAACGGGACTGGCCCTTCTGCCTCTCCCTGCTCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CCA 90 bp CCATCTGAAGAGCAGGGAGAGGCAGAAGGGCCAGTCCCGTTCAGTTaGTGGACGTCCTTCGGCTCTGGCTTAGAGGACATGACAGGCACG +
Preference number: 5 (lower is better)
Translates to: PSEEQGEAEGPVPFS*WTSFGSGLEDMTGT
Trigger: CGTGCCTGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTCCACCAACTGAACGGGACTGGCCCTTCTGCCTCTCCCTGCTCTTCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CCA 90 bp TACTTGCAGCCCGATGGAAAAGGAGGTCTCCTTGAGCGGGGAAGGTaGCGCAGGGCCACGGTCTGTGCTGACGTCGTCACTTTCGTTGCT +
Preference number: 5 (lower is better)
Translates to: YLQPDGKGGLLERGR*RRATVCADVVTFVA
Trigger: AGCAACGAAAGTGACGACGTCAGCACAGACCGTGGCCCTGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTTCCATCGGGCTGCAAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 90 bp GCTCTGGGGGACTGGTCTCCACAGACTGCATTACCCAGTCTCCCTTaGTGGCTGCTTCCACTGTTTGTTCAGTGGGAGGCAACAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALGDWSPQTALPSLP*WLLPLFVQWEATAG
Trigger: GCCTGCTGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTGGAGACCAGTCCCCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS-3UTR CAA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACTCGGGCCCAACTGGTaGGCTGCCGGTGGCAAACGT +
Preference number: 5 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGLGPNW*AAGGKR
Trigger: ACGTTTGCCACCGGCAGCCAACCAGTTGGGCCCGAG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AAGCCTACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCTCCTCCCGAACCCCCTaGGCGTTGGCCCGAGACTCA +
Preference number: 5 (lower is better)
Translates to: KPTSKSPDLYTCDCGWRLSSRTP*ALARDS
Trigger: TGAGTCTCGGGCCAACGCCAAGGGGGTTCGGGAGGA...GAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGTAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 90 bp CTGCACGATGTCCAACACCATGCCAGCAGCCACGGTCCCAAAGCCTaGCAGGAGGAATGGAAACAGTACTTGCAGCCCGATGGAAAAGGA +
Preference number: 5 (lower is better)
Translates to: LHDVQHHASSHGPKA*QEEWKQYLQPDGKG
Trigger: TCCTTTTCCATCGGGCTGCAAGTACTGTTTCCATTCCTCCTGGCAGGCTTTGGGACCGTGGCTGCTGGCATGGTGTTGGACATCGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp TCCTCCTCTGCTCACTCAGGGCCTGGGGCATGCCTATCTGTCTGCTTTTTAGGCGCCATCCCAGCAAAGTaGGGGTCTGAGACAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SSSAHSGPGACLSVCFLGAIPAK*GSETVL
Trigger: CAAGACTGTCTCAGACCCCAACTTTGCTGGGATGGC...GCCTAAAAAGCAGACAGATAGGCATGCCCCAGGCCCTGAGTGAGCAGAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 90 bp CTTCTCAGCCTTGCTCTGAGCTCTGGGGGACTGGTCTCCACAGACTaGATTACCCAGTCTCCCTTGCTGGCTGCTTCCACTGTTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LLSLALSSGGLVSTD*ITQSPLLAASTVCS
Trigger: TGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTGGAGACCAGTCCCCCAGAGCTCAGAGCAAGGCTGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 90 bp CACCACCCAGACAGGCAGCAGGGCCACAAAGAAAGCACACACCAGTaGGTAGATGTATCGCCAGTGATTCAGTTCCAGGTAGAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HHPDRQQGHKESTHQ*VDVSPVIQFQVESP
Trigger: TGGGGACTCTACCTGGAACTGAATCACTGGCGATACATCTACCCACTGGTGTGTGCTTTCTTTGTGGCCCTGCTGCCTGTCTGGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS-3UTR CAA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAGCCCCCAATCGCTTCTaGCCCGCGGACTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: TDLYGMTERVILGSDRVQAPNRF*PADSGP
Trigger: TGGGCCCGAGTCCGCGGGCAAGAAGCGATTGGGGGC...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAGAAAAGGAGGTCTCCTaGAGCGGGGAAGGTGGCGCA +
Preference number: 5 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAEKEVS*SGEGGA
Trigger: TGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTTC...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS TCA 90 bp CCCTCTATGGAGATGCAGCAGTTCCATGTTCCCCTGGCAAAGCTGTaGCAGTGCCGGAAAGGATACGTGCAGATCTGCAGACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PSMEMQQFHVPLAKL*QCRKGYVQICRLRE
Trigger: CTCTCTGAGTCTGCAGATCTGCACGTATCCTTTCCGGCACTGTCACAGCTTTGCCAGGGGAACATGGAACTGCTGCATCTCCATAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 90 bp TCCATGTTCCCCTGGCAAAGCTGTGACAGTGCCGGAAAGGATACGTaGAGATCTGCAGACTCAGAGAGCCTGACTTCTCCACCAGTAGAG +
Preference number: 5 (lower is better)
Translates to: SMFPWQSCDSAGKDT*RSADSESLTSPPVE
Trigger: CTCTACTGGTGGAGAAGTCAGGCTCTCTGAGTCTGCAGATCTGCACGTATCCTTTCCGGCACTGTCACAGCTTTGCCAGGGGAACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS-3UTR CAA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTTATGGGATGGAGAAGTaGTCCGGGTCCAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVYGMEK*SGSRPR
Trigger: CCGGGGCCTGGACCCGGACAACTTCTCCATCCCATA...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GTGGCTCTAGCTGTGGTCAGCACTGCACAGAGTAGGGGTCTGGAAAGGAGAAAGGAGGGGTTGTTGATGTaGACCAGGCCATTGAACAAG +
Preference number: 5 (lower is better)
Translates to: VALAVVSTAQSRGLERRKEGLLM*TRPLNK
Trigger: CTTGTTCAATGGCCTGGTCAACATCAACAACCCCTC...CTTTCTCCTTTCCAGACCCCTACTCTGTGCAGTGCTGACCACAGCTAGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS TCA 90 bp GGCACTGCAAAAACTGATCCACCAACAGGCAGCCCCATCAAGCACTaGAGCCGCAAGCTGGGAAGAAACAAGAAATTCCTCACCAGACAG +
Preference number: 5 (lower is better)
Translates to: GTAKTDPPTGSPIKH*SRKLGRNKKFLTRQ
Trigger: CTGTCTGGTGAGGAATTTCTTGTTTCTTCCCAGCTTGCGGCTTCAGTGCTTGATGGGGCTGCCTGTTGGTGGATCAGTTTTTGCAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS-3UTR CAA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCGCCAGTCCCGTTCAGTaGGTGGACGTCCTTCGGCTC +
Preference number: 5 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSASPVQ*VDVLRL
Trigger: GAGCCGAAGGACGTCCACCAACTGAACGGGACTGGC...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp CTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGTTTGGGCGAACCCCCTTGGCGTaGGCCCGAGACTCAATCACC +
Preference number: 5 (lower is better)
Translates to: LSRALKLVHFYKSMSVFGRTPLA*ARDSIT
Trigger: GGTGATTGAGTCTCGGGCCAACGCCAAGGGGGTTCG...CCCAAACACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGACGTCGTCACTTTCGTaGCTCTGGCTCCCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRTSSLS*LWLPFS
Trigger: GGAGAACGGGAGCCAGAGCAACGAAAGTGACGACGT...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGAGGGTTGATCCCAATCTaGCGAGAGCCAATGATGACT +
Preference number: 5 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGGLIPI*REPMMT
Trigger: AGTCATCATTGGCTCTCGCAAGATTGGGATCAACCC...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGACTCCTGTCCAGAGCTTaGAAGTTGGTCCACTTCTAC +
Preference number: 5 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGLLSRA*KLVHFY
Trigger: GTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAG...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCCTCCTTCCCGCTCCTTaGGCTGGGCTCTGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSLLPAP*AGLCQL
Trigger: AAGCTGACAGAGCCCAGCCAAAGGAGCGGGAAGGAG...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTGGGTCTGAGACAGTCTaGTCCAAGATGAGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFGSETV*SKMRPP
Trigger: GGGAGGCCTCATCTTGGACAAGACTGTCTCAGACCC...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATACAGAGGGAGGGGTTGTaGATGTTGACCAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: RETKSFGPRENVDFGEPIQREGL*MLTRPL
Trigger: CAATGGCCTGGTCAACATCAACAACCCCTCCCTCTG...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAGGAAATAAATACTGGTaGAGCAATGGGGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: NKYWLSNGAVALAVVSTAGNKYW*SNGAVA
Trigger: AGCCACCGCCCCATTGCTCAACCAGTATTTATTTCC...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 90 bp AAACTTCCTCCCTTCCTGGGAAGAGCTAATACCTCTTCAAATCCCTaGTCCTTAAAGTCACGAGAATCAGTGTGGAACACCTGCCCCTCG +
Preference number: 5 (lower is better)
Translates to: KLPPFLGRANTSSNP*SLKSRESVWNTCPS
Trigger: CGAGGGGCAGGTGTTCCACACTGATTCTCGTGACTTTAAGGACCAGGGATTTGAAGAGGTATTAGCTCTTCCCAGGAAGGGAGGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp TACGAGAGTAAACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTATCCGCCAGAGCTCCTaGGGTGTGTCCATGTGTCCA +
Preference number: 5 (lower is better)
Translates to: YESKPILLLAARPKVHAVIRQSS*GVSMCP
Trigger: TGGACACATGGACACACCCAAGGAGCTCTGGCGGAT...AACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp CCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGACAGGTTGCCACGTTGTCTGGGTaGATCCCAATCTTGCGAGAG +
Preference number: 5 (lower is better)
Translates to: PKIQSPLTKGFSLGPRQVATLSG*IPILRE
Trigger: CTCTCGCAAGATTGGGATCAACCCAGACAACGTGGC...AACCTGTCTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTAGTACAACACCTCCCTaGTGGCTGGACTTCGTCGGG +
Preference number: 5 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCSTTPP*WLDFVG
Trigger: CCCGACGAAGTCCAGCCACAAGGGAGGTGTTGTACT...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATAGGGATGGGGAAAATGTaGAGTGACCAAGCTAGTCCC +
Preference number: 5 (lower is better)
Translates to: RETKSFGPRENVDFGEPIGMGKM*SDQASP
Trigger: GGGACTAGCTTGGTCACTCAACATTTTCCCCATCCC...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACATCCAAATCCCCAGATCTGTACACGTGTGACTGCGGATGGAGGCTCCAGTTTTTAGGGGCAGAGGAGTaGGTTTTGATGCCTGTACAA +
Preference number: 5 (lower is better)
Translates to: TSKSPDLYTCDCGWRLQFLGAEE*VLMPVQ
Trigger: TTGTACAGGCATCAAAACCAACTCCTCTGCCCCTAA...AAACTGGAGCCTCCATCCGCAGTCACACGTGTACAGATCTGGGGATTTGGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS TCA 90 bp AAACAAGAAATTCCTCACCAGACAGCCACTAGGGGTGCAGATGCCTaGCTCCAACCCACCAGCTCTGTGCTTGAAGAAAAAGTATCTGTC +
Preference number: 5 (lower is better)
Translates to: KQEIPHQTATRGADA*LQPTSSVLEEKVSV
Trigger: GACAGATACTTTTTCTTCAAGCACAGAGCTGGTGGGTTGGAGTCAGGCATCTGCACCCCTAGTGGCTGTCTGGTGAGGAATTTCTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS-3UTR CAA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGACAGCGGCGAGGAGCTaGCTCAGAGTTCTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLTAARS*LRVLSG
Trigger: CCCGGAGAGAACTCTGAGCAAGCTCCTCGCCGCTGT...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp CAAAGAATCTGGGCCCAGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATCCAGAGCTTTGAAGTaGGTCCACTTCTACAAAAGT +
Preference number: 5 (lower is better)
Translates to: QRIWAQGDKVIWAQGECGSRALK*VHFYKS
Trigger: ACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGA...TCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCTGGGCCCAGATTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGATCAGAGGGAGGGGTaGTTGATGTTGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCDQREG*LMLTRP
Trigger: TGGCCTGGTCAACATCAACAACCCCTCCCTCTGATC...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACTGACCTCTATGGCATGACAGAACGAGTAATTTTAGGAAGTGACAGGGTCCAAGGGAGACAAAGTCATTaGGGCCCAGGGAGAATGTGG +
Preference number: 5 (lower is better)
Translates to: TDLYGMTERVILGSDRVQGRQSH*GPGRMW
Trigger: CCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCC...TTGGACCCTGTCACTTCCTAAAATTACTCGTTCTGTCATGCCATAGAGGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGTGTTTCAGACCATGCTaGTCTGCAGGAGAGCTCATC +
Preference number: 5 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRCFRPC*SAGELI
Trigger: GATGAGCTCTCCTGCAGACAAGCATGGTCTGAAACA...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 90 bp TTTGCCCATTTTGCACATGCCCAGTTTTCCTTCTGTTTCTCCATTTaGATGTTTGGATGCAGCATGAGGCCCTCACTAGAAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FAHFAHAQFSFCFSI*MFGCSMRPSLEAAA
Trigger: AGCAGCTGCTTCTAGTGAGGGCCTCATGCTGCATCCAAACATCCAAATGGAGAAACAGAAGGAAAACTGGGCATGTGCAAAATGGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 90 bp GATTCTGGTAACCAGTTTCAAGGATCAGGTTTGAGCTCCAAACTCTaGAATCTGGTATCTCCGCCAGGACCTGTGCTGATTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: DSGNQFQGSGLSSKL*NLVSPPGPVLISLL
Trigger: CAACAGAGAAATCAGCACAGGTCCTGGCGGAGATACCAGATTCCAGAGTTTGGAGCTCAAACCTGATCCTTGAAACTGGTTACCAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS-3UTR CAA 90 bp CTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGTTTGGGCTGCAGTGGAAAGCCTaGATGCCAGGGTCATTTCCA +
Preference number: 5 (lower is better)
Translates to: LSRALKLVHFYKSMSVFGLQWKA*MPGSFP
Trigger: TGGAAATGACCCTGGCATCAAGGCTTTCCACTGCAG...CCCAAACACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCTGCACTGCCACCAGATaGCCCCCAACACCATTAATC +
Preference number: 5 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSCTATR*PPTPLI
Trigger: GATTAATGGTGTTGGGGGCAATCTGGTGGCAGTGCA...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AATAAATACTGGTTGAGCAATGGGGCGGTGGCTCTAGCTGTGGTCAGCACTGCAAGGCATGTGCACAAATaGAAAAGTCAGTCCACCTTA +
Preference number: 5 (lower is better)
Translates to: NKYWLSNGAVALAVVSTARHVHK*KSQSTL
Trigger: TAAGGTGGACTGACTTTTCAATTTGTGCACATGCCT...TGCAGTGCTGACCACAGCTAGAGCCACCGCCCCATTGCTCAACCAGTATTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GAACCAATAGGTGGACATGGGTCAACAGGGAGAAGAGTGCACTGTTCCATTTTTATGAGACACCTGTGGTaGTCCTCAACCTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: EPIGGHGSTGRRVHCSIFMRHLW*SSTSKP
Trigger: TGGTTTGGAGGTTGAGGACAACCACAGGTGTCTCAT...AAAAATGGAACAGTGCACTCTTCTCCCTGTTGACCCATGTCCACCTATTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAAGCAGGAGAGCTCATCTaGCGGAGGCTGCATATTTGC +
Preference number: 5 (lower is better)
Translates to: EATDGRVSVEASEREVRKAGELI*RRLHIC
Trigger: GCAAATATGCAGCCTCCGCAAGATGAGCTCTCCTGC...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AAAAGTAGAAACAACCAGATGATGTCCACCCTGCTAGTTCTAAATCCTCTTTTGCTTGGAGGTGGGCCCTaGAGGCTACAGATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: KSRNNQMMSTLLVLNPLLLGGGP*RLQMEG
Trigger: CCCTTCCATCTGTAGCCTCAAGGGCCCACCTCCAAG...CAAAAGAGGATTTAGAACTAGCAGGGTGGACATCATCTGGTTGTTTCTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 90 bp AAACTTCCTCCCTTCCTGGGAAGAGCTAATACCTCTTCAAATCCCTaGTCCTTAAAGTCACGAGAATCAGTGTGGAACACCTTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: KLPPFLGRANTSSNP*SLKSRESVWNTLLF
Trigger: GAAGAGCAAGGTGTTCCACACTGATTCTCGTGACTTTAAGGACCAGGGATTTGAAGAGGTATTAGCTCTTCCCAGGAAGGGAGGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484000.1
CDS CCA 90 bp TTTTGCACATGCCCAGTTTTCCTTCTGTTTCTCCATTTGGATGTTTaGATGCAGCATGAGGCCCTCACTAGAAGCAGCTGCTCAATCTTG +
Preference number: 5 (lower is better)
Translates to: FCTCPVFLLFLHLDV*MQHEALTRSSCSIL
Trigger: CAAGATTGAGCAGCTGCTTCTAGTGAGGGCCTCATGCTGCATCCAAACATCCAAATGGAGAAACAGAAGGAAAACTGGGCATGTGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS-3UTR CAA 90 bp ATGTTGACCAGGCCATTGAACAAGAGGCATGTGCACAAATTGAAAAGTCAGTCCTCCATGTGTCCAATGTaGGCTGCAGTGGAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: MLTRPLNKRHVHKLKSQSSMCPM*AAVESL
Trigger: AAGGCTTTCCACTGCAGCCAACATTGGACACATGGA...GGACTGACTTTTCAATTTGTGCACATGCCTCTTGTTCAATGGCCTGGTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGGTCTCAAAAACCTACTaGTACTGCTTATCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRVSKTY*YCLSQA
Trigger: GGCCTGAGATAAGCAGTACAAGTAGGTTTTTGAGAC...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGGTCCTCTTATCTTCTTaGGTTCTCAGTGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKVLLSS*VLSGRL
Trigger: GAGCCTGCCACTGAGAACCAAAGAAGATAAGAGGAC...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGACCATGAAACTGCACTaGGTGATTGTCTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRTMKLH*VIVSKT
Trigger: GGTTTTTGAGACAATCACCAAGTGCAGTTTCATGGT...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGGAGAGTAAACCAATATaGCTCCTTGCAGCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKESKPI*LLAARP
Trigger: TGGCCTGGCTGCAAGGAGCAATATTGGTTTACTCTC...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AGGGAGACAAAGTCATTTGGGCCCAGGGAGAATGTGGATTTTGGGGAACCAATAGTGTTTCCCAAATTCTaGCTATACAAACTTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RETKSFGPRENVDFGEPIVFPKF*LYKLGS
Trigger: TGAGCCAAGTTTGTATAGCAAGAATTTGGGAAACAC...TATTGGTTCCCCAAAATCCACATTCTCCCTGGGCCCAAATGACTTTGTCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp AACAAAACCAAAAATCCAGAGCCCACTTACAAAGGGTTTCTCATTAGGGCCAAGGTAGAAACAGGATCATaGCCTAAGCCTTCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: NKTKNPEPTYKGFLIRAKVETGS*PKPSLG
Trigger: TCCAAGGGAAGGCTTAGGCAATGATCCTGTTTCTAC...CTTGGCCCTAATGAGAAACCCTTTGTAAGTGGGCTCTGGATTTTTGGTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTGCAGAGGAGTTGGTTTaGATGCCTGTACAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCAEELV*MPVQEE
Trigger: TTCTTCTTGTACAGGCATCAAAACCAACTCCTCTGC...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp ACCAATATTGCTCCTTGCAGCCAGGCCAAAAGTACATGCAGTTGGTACAATCGGTCCGTAAAAAGCAGCTaGAGTTCAAATCTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: TNIAPCSQAKSTCSWYNRSVKSS*SSNLSE
Trigger: TTCTGAAAGATTTGAACTCAAGCTGCTTTTTACGGA...CCGATTGTACCAACTGCATGTACTTTTGGCCTGGCTGCAAGGAGCAATATTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GTGTCTCCTGTCCAGAGCTTTGAAGTTGGTCCACTTCTACAAAAGTATGTCTGTCTCTTCTTCTCTAACTaGGGAAAGAACTTAGTCTTG +
Preference number: 5 (lower is better)
Translates to: VSPVQSFEVGPLLQKYVCLFFSN*GKNLVL
Trigger: CAAGACTAAGTTCTTTCCCAAGTTAGAGAAGAAGAG...ACAGACATACTTTTGTAGAAGTGGACCAACTTCAAAGCTCTGGACAGGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS-3UTR CAA 90 bp GAGGCTACAGATGGAAGGGTTTCTGTAGAAGCTTCTGAGAGAGAAGTTAGAAAAATGATTGGTGAATGTTaGTGGGTAGAAGCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: EATDGRVSVEASEREVRKMIGEC*WVEAKK
Trigger: TTTCTTGGCTTCTACCCACAAACATTCACCAATCAT...TTTTCTAACTTCTCTCTCAGAAGCTTCTACAGAAACCCTTCCATCTGTAGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 72 bp CCGGGGAGCCGAGCTCACGCGCCCCCAATCGCTTCTTaGCCGCGGACTCGGGCCCAACTGGTTGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: PGSRAHAPPIAS*PRTRAQLVGCR
Trigger: CCGGCAGCCAACCAGTTGGGCCCGAGTCCGCGGGCAAGAAGCGATTGGGGGCGCGTGAGCTCGGCTCCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CAA 72 bp ACCGGGGAGCCGAGCTCACGCGCCCCCAATCGCTTCTaGCCCGCGGACTCGGGCCCAACTGGTTGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: TGEPSSRAPNRF*PADSGPTGWLP
Trigger: CGGCAGCCAACCAGTTGGGCCCGAGTCCGCGGGCAAGAAGCGATTGGGGGCGCGTGAGCTCGGCTCCCCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 72 bp TCCAGCCGCGACACCCGGCTCGCTACATTTCGCTTCTaGGTTACAGCGAGGCCGCCGCTCCGCTTCCACGCG +
Preference number: 6 (lower is better)
Translates to: SSRDTRLATFRF*VTARPPLRFHA
Trigger: CGCGTGGAAGCGGAGCGGCGGCCTCGCTGTAACGCAGAAGCGAAATGTAGCGAGCCGGGTGTCGCGGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 72 bp CCCCAATCGCTTCTTGCCCGCGGACTCGGGCCCAACTaGTTGGCTGCCGGTGGCAAACGTGATCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: PQSLLARGLGPN*LAAGGKRDLGQ
Trigger: CTGCCCCAGATCACGTTTGCCACCGGCAGCCAACCAGTTGGGCCCGAGTCCGCGGGCAAGAAGCGATTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 72 bp GGCCATCAGGGATCCAGCCAAAGACGACGGCTGCGATaGACGCCAGGAAGCCCACCACCGTGGCCTGCACCT +
Preference number: 6 (lower is better)
Translates to: GHQGSSQRRRLR*TPGSPPPWPAP
Trigger: AGGTGCAGGCCACGGTGGTGGGCTTCCTGGCGTCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CAA 90 bp GAAGGTGGCGCAGGGCCACGGTCTGTGCTGACGTCGTCACTTTCGTaGCTCTGGCTCCCGTTCTCCAGCAGGGCGTCCTCCTCCCGAACC +
Preference number: 6 (lower is better)
Translates to: EGGAGPRSVLTSSLS*LWLPFSSRASSSRT
Trigger: GGTTCGGGAGGAGGACGCCCTGCTGGAGAACGGGAGCCAGAGCAACGAAAGTGACGACGTCAGCACAGACCGTGGCCCTGCGCCACCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 72 bp GAAGTGGCCATCAGGGATCCAGCCAAAGACGACGGCTaGGATGGACGCCAGGAAGCCCACCACCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: EVAIRDPAKDDG*DGRQEAHHRGL
Trigger: CAGGCCACGGTGGTGGGCTTCCTGGCGTCCATCGCAGCCGTCGTCTTTGGCTGGATCCCTGATGGCCACTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CCA 72 bp CGTTCTCCAGCAGGGCGTCCTCCTCCCGAACCCCCTTaGCGTTGGCCCGAGACTCAATCACCACCTCTACCC +
Preference number: 6 (lower is better)
Translates to: RSPAGRPPPEPP*RWPETQSPPLP
Trigger: GGGTAGAGGTGGTGATTGAGTCTCGGGCCAACGCCAAGGGGGTTCGGGAGGAGGACGCCCTGCTGGAGAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CCA 72 bp AGGCTCCCAGCCCGAGTACAACACCTCCCTTGTGGCTaGACTTCGTCGGGCCAGCACCACCCAGACAGGCAG +
Preference number: 6 (lower is better)
Translates to: RLPARVQHLPCG*TSSGQHHPDRQ
Trigger: CTGCCTGTCTGGGTGGTGCTGGCCCGACGAAGTCCAGCCACAAGGGAGGTGTTGTACTCGGGCTGGGAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CAA 72 bp CCGTTCTCCAGCAGGGCGTCCTCCTCCCGAACCCCCTaGGCGTTGGCCCGAGACTCAATCACCACCTCTACC +
Preference number: 6 (lower is better)
Translates to: PFSSRASSSRTP*ALARDSITTST
Trigger: GGTAGAGGTGGTGATTGAGTCTCGGGCCAACGCCAAGGGGGTTCGGGAGGAGGACGCCCTGCTGGAGAACGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CAA 72 bp CAATCGCTTCTTGCCCGCGGACTCGGGCCCAACTGGTaGGCTGCCGGTGGCAAACGTGATCTGGGGCAGACT +
Preference number: 6 (lower is better)
Translates to: QSLLARGLGPNW*AAGGKRDLGQT
Trigger: AGTCTGCCCCAGATCACGTTTGCCACCGGCAGCCAACCAGTTGGGCCCGAGTCCGCGGGCAAGAAGCGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS TCA 72 bp ACAGTACTTGCAGCCCGATGGAAAAGGAGGTCTCCTTaGGCGGGGAAGGTGGCGCAGGGCCACGGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: TVLAARWKRRSP*AGKVAQGHGLC
Trigger: GCACAGACCGTGGCCCTGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTTCCATCGGGCTGCAAGTACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 72 bp CAGGCCCCGGCCCCACATCCAGTGCACCATCCAGTCTaGGATGTACAGGAGAATCAGCACCTGGAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: QAPAPHPVHHPV*DVQENQHLEQC
Trigger: GCACTGCTCCAGGTGCTGATTCTCCTGTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS TCA 72 bp ACCAGTAGAGCATGGGCACCTGCCTTCCTACACAGCTaGGGGGATGAAGCCCTGCCTTGCCTCACCGCCTCA +
Preference number: 6 (lower is better)
Translates to: TSRAWAPAFLHS*GDEALPCLTAS
Trigger: TGAGGCGGTGAGGCAAGGCAGGGCTTCATCCCCTCAGCTGTGTAGGAAGGCAGGTGCCCATGCTCTACTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 72 bp AAGTTGTCCGGGTCCAGGCCCCGGCCCCACATCCAGTaGACCATCCAGTCTGCGATGTACAGGAGAATCAGC +
Preference number: 6 (lower is better)
Translates to: KLSGSRPRPHIQ*TIQSAMYRRIS
Trigger: GCTGATTCTCCTGTACATCGCAGACTGGATGGTGCACTGGATGTGGGGCCGGGGCCTGGACCCGGACAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS CCA 72 bp GCCAGTCCCGTTCAGTTGGTGGACGTCCTTCGGCTCTaGCTTAGAGGACATGACAGGCACGGAGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: ASPVQLVDVLRL*LRGHDRHGGGE
Trigger: TTCCCCTCCTCCGTGCCTGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTCCACCAACTGAACGGGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CAA 72 bp AACAGTACTTGCAGCCCGATGGAAAAGGAGGTCTCCTaGAGCGGGGAAGGTGGCGCAGGGCCACGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: NSTCSPMEKEVS*SGEGGAGPRSV
Trigger: CACAGACCGTGGCCCTGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTTCCATCGGGCTGCAAGTACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CAA 90 bp AGGAATGGAAACAGTACTTGCAGCCCGATGGAAAAGGAGGTCTCCTaGAGCGGGGAAGGTGGCGCAGGGCCACGGTCTGTGCTGACGTCG +
Preference number: 6 (lower is better)
Translates to: RNGNSTCSPMEKEVS*SGEGGAGPRSVLTS
Trigger: CGACGTCAGCACAGACCGTGGCCCTGCGCCACCTTCCCCGCTCAAGGAGACCTCCTTTTCCATCGGGCTGCAAGTACTGTTTCCATTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS GCA 72 bp GCTTGCTCAGAGTTCTCTCCGGGCATTCCATTCATGTaGAGGAAGGTGGAGATGCGGCTGGCCTGCACTGCC +
Preference number: 6 (lower is better)
Translates to: ACSEFSPGIPFM*RKVEMRLACTA
Trigger: GGCAGTGCAGGCCAGCCGCATCTCCACCTTCCTGCACATGAATGGAATGCCCGGAGAGAACTCTGAGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS CCA 72 bp CAGGGAGAGGCAGAAGGGCCAGTCCCGTTCAGTTGGTaGACGTCCTTCGGCTCTGGCTTAGAGGACATGACA +
Preference number: 6 (lower is better)
Translates to: QGEAEGPVPFSW*TSFGSGLEDMT
Trigger: TGTCATGTCCTCTAAGCCAGAGCCGAAGGACGTCCACCAACTGAACGGGACTGGCCCTTCTGCCTCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CAA 90 bp AGCAGCCACGGTCCCAAAGCCTGCCAGGAGGAATGGAAACAGTACTaGCAGCCCGATGGAAAAGGAGGTCTCCTTGAGCGGGGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: SSHGPKACQEEWKQY*QPDGKGGLLERGRW
Trigger: CCACCTTCCCCGCTCAAGGAGACCTCCTTTTCCATCGGGCTGCAAGTACTGTTTCCATTCCTCCTGGCAGGCTTTGGGACCGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367137.4
CDS CAA 90 bp ATGTGCAGGAAGGTGGAGATGCGGCTGGCCTGCACTGCCACCAGATaGCCCCCAACACCTGCAGAGACACATACGGGCTTAGACACAGAC +
Preference number: 6 (lower is better)
Translates to: MCRKVEMRLACTATR*PPTPAETHTGLDTD
Trigger: GTCTGTGTCTAAGCCCGTATGTGTCTCTGCAGGTGTTGGGGGCAATCTGGTGGCAGTGCAGGCCAGCCGCATCTCCACCTTCCTGCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp CACAGACTGCATTACCCAGTCTCCCTTGCTGGCTGCTTCCACTGTTaGTTCAGTGGGAGGCAACAGCAGGCAACCAGAGGGCAGGTGGAG +
Preference number: 6 (lower is better)
Translates to: HRLHYPVSLAGCFHC*FSGRQQQATRGQVE
Trigger: CTCCACCTGCCCTCTGGTTGCCTGCTGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp AGTCTCCCTTGCTGGCTGCTTCCACTGTTTGTTCAGTaGGAGGCAACAGCAGGCAACCAGAGGGCAGGTGGA +
Preference number: 6 (lower is better)
Translates to: SLPCWLLPLFVQ*EATAGNQRAGG
Trigger: TCCACCTGCCCTCTGGTTGCCTGCTGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp GGCGTGAAGACAGCCATCCCAGCAAAGTTGGGGTCTGAGACAGTCTaGTCCAAGATGAGGCCTCCCACACTGCTGATGGCCATGGCAATG +
Preference number: 6 (lower is better)
Translates to: GVKTAIPAKLGSETV*SKMRPPTLLMAMAM
Trigger: CATTGCCATGGCCATCAGCAGTGTGGGAGGCCTCATCTTGGACAAGACTGTCTCAGACCCCAACTTTGCTGGGATGGCTGTCTTCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS TCA 72 bp GCCTTGCCTCACCGCCTCACCTCCTCTCCAATGCTCTaGGCAGACCCAGGCATCCTATGGTCATATGCTGAT +
Preference number: 6 (lower is better)
Translates to: ALPHRLTSSPML*ADPGILWSYAD
Trigger: ATCAGCATATGACCATAGGATGCCTGGGTCTGCTCAGAGCATTGGAGAGGAGGTGAGGCGGTGAGGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 72 bp AAGGTGGTACAAGGACTGGGACAGCGGCGAGGAGCTTaGTCAGAGTTCTCTCCGGGCATTCCATTCATGTGC +
Preference number: 6 (lower is better)
Translates to: KVVQGLGQRRGA*SEFSPGIPFMC
Trigger: GCACATGAATGGAATGCCCGGAGAGAACTCTGAGCAAGCTCCTCGCCGCTGTCCCAGTCCTTGTACCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367137.4
ENST00000468057.5
ENST00000484228.1
CDS CAA 72 bp ACAGCCATCCCAGCAAAGTTGGGGTCTGAGACAGTCTaGTCCAAGATGAGGCCTCCCACACTGCTGATGGCC +
Preference number: 6 (lower is better)
Translates to: TAIPAKLGSETV*SKMRPPTLLMA
Trigger: GGCCATCAGCAGTGTGGGAGGCCTCATCTTGGACAAGACTGTCTCAGACCCCAACTTTGCTGGGATGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CAA 72 bp CATTACCCAGTCTCCCTTGCTGGCTGCTTCCACTGTTaGTTCAGTGGGAGGCAACAGCAGGCAACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: HYPVSLAGCFHC*FSGRQQQATRG
Trigger: CCCTCTGGTTGCCTGCTGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp ACCTGGATGAGGGCCATGTTCCCAGTGATCATCCGCCAGAGCTCCTaGGGTGTGTCCATGTGTCCAATGTTGGCTGCAGTGGAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: TWMRAMFPVIIRQSS*GVSMCPMLAAVESL
Trigger: AAGGCTTTCCACTGCAGCCAACATTGGACACATGGACACACCCAAGGAGCTCTGGCGGATGATCACTGGGAACATGGCCCTCATCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS GCA 72 bp CTCCACAGACTGCATTACCCAGTCTCCCTTGCTGGCTaGTTCCACTGTTTGTTCAGTGGGAGGCAACAGCAG +
Preference number: 6 (lower is better)
Translates to: LHRLHYPVSLAG*FHCLFSGRQQQ
Trigger: CTGCTGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 72 bp GACTGGTCTCCACAGACTGCATTACCCAGTCTCCCTTaGTGGCTGCTTCCACTGTTTGTTCAGTGGGAGGCA +
Preference number: 6 (lower is better)
Translates to: DWSPQTALPSLP*WLLPLFVQWEA
Trigger: TGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTGGAGACCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS GCA 72 bp CCCTGGCAAAGCTGTGACAGTGCCGGAAAGGATACGTaGAGATCTGCAGACTCAGAGAGCCTGACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PWQSCDSAGKDT*RSADSESLTSP
Trigger: TGGAGAAGTCAGGCTCTCTGAGTCTGCAGATCTGCACGTATCCTTTCCGGCACTGTCACAGCTTTGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp TCCCCTCTATGGAGATGCAGCAGTTCCATGTTCCCCTaGCAAAGCTGTGACAGTGCCGGAAAGGATACGTGC +
Preference number: 6 (lower is better)
Translates to: SPLWRCSSSMFP*QSCDSAGKDTC
Trigger: GCACGTATCCTTTCCGGCACTGTCACAGCTTTGCCAGGGGAACATGGAACTGCTGCATCTCCATAGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS TCA 72 bp AACTCTGGAATCTGGTATCTCCGCCAGGACCTGTGCTaGTTTCTCTGTTGCCCTCACATCCCAACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: NSGIWYLRQDLC*FLCCPHIPTCS
Trigger: GGAGCAGGTTGGGATGTGAGGGCAACAGAGAAATCAGCACAGGTCCTGGCGGAGATACCAGATTCCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS TCA 72 bp GAGATGCAGCAGTTCCATGTTCCCCTGGCAAAGCTGTaGCAGTGCCGGAAAGGATACGTGCAGATCTGCAGA +
Preference number: 6 (lower is better)
Translates to: EMQQFHVPLAKL*QCRKGYVQICR
Trigger: TCTGCAGATCTGCACGTATCCTTTCCGGCACTGTCACAGCTTTGCCAGGGGAACATGGAACTGCTGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp CAACAGGCAGCCCCATCAAGCACTGAAGCCGCAAGCTaGGAAGAAACAAGAAATTCCTCACCAGACAGCCAC +
Preference number: 6 (lower is better)
Translates to: QQAAPSSTEAAS*EETRNSSPDSH
Trigger: GTGGCTGTCTGGTGAGGAATTTCTTGTTTCTTCCCAGCTTGCGGCTTCAGTGCTTGATGGGGCTGCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CCA 72 bp TGGTCTCCACAGACTGCATTACCCAGTCTCCCTTGCTaGCTGCTTCCACTGTTTGTTCAGTGGGAGGCAACA +
Preference number: 6 (lower is better)
Translates to: WSPQTALPSLPC*LLPLFVQWEAT
Trigger: TGTTGCCTCCCACTGAACAAACAGTGGAAGCAGCCAGCAAGGGAGACTGGGTAATGCAGTCTGTGGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp CCAACACCATTAATCACAGGCGTGAAGACAGCCATCCCAGCAAAGTaGGGGTCTGAGACAGTCTTGTCCAAGATGAGGCCTCCCACACTG +
Preference number: 6 (lower is better)
Translates to: PTPLITGVKTAIPAK*GSETVLSKMRPPTL
Trigger: CAGTGTGGGAGGCCTCATCTTGGACAAGACTGTCTCAGACCCCAACTTTGCTGGGATGGCTGTCTTCACGCCTGTGATTAATGGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CCA 72 bp GACAGGCAGCAGGGCCACAAAGAAAGCACACACCAGTaGGTAGATGTATCGCCAGTGATTCAGTTCCAGGTA +
Preference number: 6 (lower is better)
Translates to: DRQQGHKESTHQ*VDVSPVIQFQV
Trigger: TACCTGGAACTGAATCACTGGCGATACATCTACCCACTGGTGTGTGCTTTCTTTGTGGCCCTGCTGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CAA 72 bp TTAATCACAGGCGTGAAGACAGCCATCCCAGCAAAGTaGGGGTCTGAGACAGTCTTGTCCAAGATGAGGCCT +
Preference number: 6 (lower is better)
Translates to: LITGVKTAIPAK*GSETVLSKMRP
Trigger: AGGCCTCATCTTGGACAAGACTGTCTCAGACCCCAACTTTGCTGGGATGGCTGTCTTCACGCCTGTGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000468057.5
CDS CAA 90 bp ACCAGCTCTGTGCTTGAAGAAAAAGTATCTGTCCTCTTATCTTCTTaGGTTCTCAGTGGCAGGCTCCTCAGAGCAGGGGGCATCCAGAGT +
Preference number: 6 (lower is better)
Translates to: TSSVLEEKVSVLLSS*VLSGRLLRAGGIQS
Trigger: ACTCTGGATGCCCCCTGCTCTGAGGAGCCTGCCACTGAGAACCAAAGAAGATAAGAGGACAGATACTTTTTCTTCAAGCACAGAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS TCA 72 bp AAAACTGATCCACCAACAGGCAGCCCCATCAAGCACTaGAGCCGCAAGCTGGGAAGAAACAAGAAATTCCTC +
Preference number: 6 (lower is better)
Translates to: KTDPPTGSPIKH*SRKLGRNKKFL
Trigger: GAGGAATTTCTTGTTTCTTCCCAGCTTGCGGCTTCAGTGCTTGATGGGGCTGCCTGTTGGTGGATCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CAA 90 bp CCACTAGGGGTGCAGATGCCTGACTCCAACCCACCAGCTCTGTGCTaGAAGAAAAAGTATCTGTCCTCTTATCTTCTTTGGTTCTCAGTG +
Preference number: 6 (lower is better)
Translates to: PLGVQMPDSNPPALC*KKKYLSSYLLWFSV
Trigger: CACTGAGAACCAAAGAAGATAAGAGGACAGATACTTTTTCTTCAAGCACAGAGCTGGTGGGTTGGAGTCAGGCATCTGCACCCCTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367137.4
ENST00000484000.1
CDS CCA 72 bp GCTTCCCCATGTTGGGGGCAAAGACAGAGCTTTCACTaGACTCCTATAATGCTATTCCCTCGTTACTATGGT +
Preference number: 6 (lower is better)
Translates to: ASPCWGQRQSFH*TPIMLFPRYYG
Trigger: ACCATAGTAACGAGGGAATAGCATTATAGGAGTCCAGTGAAAGCTCTGTCTTTGCCCCCAACATGGGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp AACCAGTTTCAAGGATCAGGTTTGAGCTCCAAACTCTaGAATCTGGTATCTCCGCCAGGACCTGTGCTGATT +
Preference number: 6 (lower is better)
Translates to: NQFQGSGLSSKL*NLVSPPGPVLI
Trigger: AATCAGCACAGGTCCTGGCGGAGATACCAGATTCCAGAGTTTGGAGCTCAAACCTGATCCTTGAAACTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp AGAGGCACTGTCCTCTGTCTTAATTTAGGGTCTATGTaGGCATCACCCATTCACCAGTCCCCAAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: RGTVLCLNLGSM*ASPIHQSPKEE
Trigger: CTCTTCTTTTGGGGACTGGTGAATGGGTGATGCCCACATAGACCCTAAATTAAGACAGAGGACAGTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp CCCATGAGAGTGGGTTGTCATAAAGCGAGGTTTGCCTCTCTTGTTTaGCCCATTTTGCACATGCCCAGTTTTCCTTCTGTTTCTCCATTT +
Preference number: 6 (lower is better)
Translates to: PMRVGCHKARFASLV*PILHMPSFPSVSPF
Trigger: AAATGGAGAAACAGAAGGAAAACTGGGCATGTGCAAAATGGGCAAAACAAGAGAGGCAAACCTCGCTTTATGACAACCCACTCTCATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CCA 72 bp AAACTCATGTTGTGGCTTGGTCCCCAAATGTGGTGGTaGGAGGTGGTGCCTTTAAGAGTGAATAGGTTATTA +
Preference number: 6 (lower is better)
Translates to: KLMLWLGPQMWW*EVVPLRVNRLL
Trigger: TAATAACCTATTCACTCTTAAAGGCACCACCTCCCACCACCACATTTGGGGACCAAGCCACAACATGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp GTGGGTTGTCATAAAGCGAGGTTTGCCTCTCTTGTTTTGCCCATTTaGCACATGCCCAGTTTTCCTTCTGTTTCTCCATTTGGATGTTTG +
Preference number: 6 (lower is better)
Translates to: VGCHKARFASLVLPI*HMPSFPSVSPFGCL
Trigger: CAAACATCCAAATGGAGAAACAGAAGGAAAACTGGGCATGTGCAAAATGGGCAAAACAAGAGAGGCAAACCTCGCTTTATGACAACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 72 bp CATAAAGCGAGGTTTGCCTCTCTTGTTTTGCCCATTTaGCACATGCCCAGTTTTCCTTCTGTTTCTCCATTT +
Preference number: 6 (lower is better)
Translates to: HKARFASLVLPI*HMPSFPSVSPF
Trigger: AAATGGAGAAACAGAAGGAAAACTGGGCATGTGCAAAATGGGCAAAACAAGAGAGGCAAACCTCGCTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1
CDS CAA 90 bp AGCTTTCACTGGACTCCTATAATGCTATTCCCTCGTTACTATGGTTaGAATATAGTTTGTCCCCAACAAAACTCATGTTGTGGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SFHWTPIMLFPRYYG*NIVCPQQNSCCGLV
Trigger: GACCAAGCCACAACATGAGTTTTGTTGGGGACAAACTATATTCAAACCATAGTAACGAGGGAATAGCATTATAGGAGTCCAGTGAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484228.1