RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A9 (Homo sapiens)

Ensembl gene IDs: ENSG00000029364

Ensembl transcript IDs: ENST00000031146.8, ENST00000336643.10, ENST00000538956.5, ENST00000554059.1, ENST00000555245.5, ENST00000555840.5, ENST00000556125.5, ENST00000556605.5, ENST00000557046.1, ENST00000628474.2

Found 707 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCGGCTGAGGCCTCTCCCTCCCGTGGCATCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCAGGGAGGACATGTACTGTGGCAACA +
Preference number: 1 (lower is better)
Translates to: RRLRPLPPVASGLWL*PIPPTSGRTCTVAT
Trigger: TGTTGCCACAGTACATGTCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCCTCAGCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 90 bp ACTTCCAGGCGGCTGAGGCCTCTCCCTCCCGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCCACCTCAGGGAGGACATGTACTGTG +
Preference number: 1 (lower is better)
Translates to: TSRRLRPLPPVASGL*LCPIPPTSGRTCTV
Trigger: CACAGTACATGTCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCCTCAGCCGCCTGGAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR TCA 90 bp CCTGGACCAAGGCTGGACCTTGAACATTTAATGCTGGTGTCCTACTaGCAGGATGAGAGGGATGAGGCAACCCAGAACCAGGGCTGCCAC +
Preference number: 1 (lower is better)
Translates to: PGPRLDLEHLMLVSY*QDERDEATQNQGCH
Trigger: GTGGCAGCCCTGGTTCTGGGTTGCCTCATCCCTCTCATCCTGTCAGTAGGACACCAGCATTAAATGTTCAAGGTCCAGCCTTGGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 90 bp CATGCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTaGTTGGTTCCCTGCTGCCTGAAGATGCATTTGAGCCCTATGAGA +
Preference number: 1 (lower is better)
Translates to: HASKLFLQSRRPVPR*LVPCCLKMHLSPMR
Trigger: TCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR TCA 90 bp ACCAGTCACCTCTTTAGAAGCTCCTCCCACCTCTCCTGCTCCATTTaGTGGAATGGCAGGCTGGATTCAGAGAGGCACGTGCCAAAGGAG +
Preference number: 1 (lower is better)
Translates to: TSHLFRSSSHLSCSI*WNGRLDSERHVPKE
Trigger: CTCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGGAGGAGCTTCTAAAGAGGTGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 90 bp TGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGACATGTACTGTaGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATGGCCACTC +
Preference number: 1 (lower is better)
Translates to: CGCALFRPPQGGHVL*QHKEMSRQRKAWPL
Trigger: GAGTGGCCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATGTCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 90 bp GAAGCTCCTCCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCT +
Preference number: 1 (lower is better)
Translates to: EAPPTSPAPFDGMAG*IQRGTCQRSCLNPS
Trigger: AGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGGAGGAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 90 bp CTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCTaGTGCCTGAAGATGCATTTGAGCCCTATGAGATTAGTATGGCTA +
Preference number: 1 (lower is better)
Translates to: LFLQSRRPVPRCLVP*CLKMHLSPMRLVWL
Trigger: TAGCCATACTAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 90 bp CATGTACTGTGGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTTACTGC +
Preference number: 1 (lower is better)
Translates to: HVLWQHKEMSRQRKA*PLPWRSPLKGLLYC
Trigger: GCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 90 bp TTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCTGCTaGCTGAAGATGCATTTGAGCCCTATGAGATTAGTATGGCTATTT +
Preference number: 1 (lower is better)
Translates to: FLQSRRPVPRCLVPC*LKMHLSPMRLVWLF
Trigger: AAATAGCCATACTAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 90 bp GCTGCTTCTGGATCGTCAGTAGAATGCACATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAAACGAAGCCCAGAACGAGGGAAACA +
Preference number: 1 (lower is better)
Translates to: AASGSSVECTWELPI*STSNMKTKPRTRET
Trigger: TGTTTCCCTCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGATCCAGAAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 90 bp CAACATAAAGAAATGTCCCGGCAGAGAAAAGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGGCTTCTTTACTGCTCTTACTCAGTC +
Preference number: 1 (lower is better)
Translates to: QHKEMSRQRKAWPLP*RSPLKGLLYCSYSV
Trigger: GACTGAGTAAGAGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR TCA 90 bp GCAGTTTTAAACAAGAGGAAAACGGAACTGAAATGTGCCAAGAAGTaGACACGGACATGGCCTCTCCTGGAATACTGCCCACCATGCCAG +
Preference number: 1 (lower is better)
Translates to: AVLNKRKTELKCAKK*TRTWPLLEYCPPCQ
Trigger: CTGGCATGGTGGGCAGTATTCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCTTGTTTAAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR GCA 90 bp CCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAATG +
Preference number: 1 (lower is better)
Translates to: PAPFDGMAGWIQRGT*QRSCLNPSRHPFSM
Trigger: CATTGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 90 bp GGTCCAGAGGGGAAGGCAAATTTGGAAGTCAGATGGTTCAATCCTTaGCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACT +
Preference number: 1 (lower is better)
Translates to: GPEGKANLEVRWFNP*RSSRLHPARYTSQT
Trigger: AGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTCTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 90 bp TGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTaGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: CRTTTEDFHLTLQQF*MNLVMILSLPRGSG
Trigger: CCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CCA 90 bp AAAGGTTTGCTTGTTAATAGTGAGGTCCAGAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATCCTTGCCGGAGTTCAAGGCTCCATC +
Preference number: 1 (lower is better)
Translates to: KGLLVNSEVQRGRQI*KSDGSILAGVQGSI
Trigger: GATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTCTGGACCTCACTATTAACAAGCAAACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR TCA 90 bp CACTGTGGCCAGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTaGTCCAGTGACAAATTCATGAAGGAAATAAATCATAGGCATGCT +
Preference number: 1 (lower is better)
Translates to: HCGQQRAHKLYFHSC*SSDKFMKEINHRHA
Trigger: AGCATGCCTATGATTTATTTCCTTCATGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCTGGCCACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 90 bp ATGACTACATACAACTGTATCCTATTTGTGCTACTTTCCTCACTGTaGCCAGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATC +
Preference number: 1 (lower is better)
Translates to: MTTYNCILFVLLSSL*PAEGSQALFPQLLI
Trigger: GATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCTGGCCACAGTGAGGAAAGTAGCACAAATAGGATACAGTTGTATGTAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR TCA 90 bp CTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAATACCAGTCACCTCTTTAGAAGCTCC +
Preference number: 1 (lower is better)
Translates to: LLSRNVETGILQRRT*QGMLQNTSHLFRSS
Trigger: GGAGCTTCTAAAGAGGTGACTGGTATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 90 bp CTACTAGAACTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAGGAATGCTACAAAATACCAGTCACC +
Preference number: 1 (lower is better)
Translates to: LLELGSSLGMWRQVF*KGELDKECYKIPVT
Trigger: GGTGACTGGTATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAGTTCTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 90 bp CTGACTGTTCTTGAAGGAAAGCCTAGAACTGAAACTACTAGAACTTaGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGA +
Preference number: 1 (lower is better)
Translates to: LTVLEGKPRTETTRT*LLSRNVETGILQRR
Trigger: TCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAGTTCTAGTAGTTTCAGTTCTAGGCTTTCCTTCAAGAACAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR TCA 90 bp CAAGATATACTAGCCAAACTTTTAAGCATGATGGCAAGGCACTGCTaGAAGAGGCTTTGGCCAGTAGAACAAATTACCATTGCACACAAC +
Preference number: 1 (lower is better)
Translates to: QDILAKLLSMMARHC*KRLWPVEQITIAHN
Trigger: GTTGTGTGCAATGGTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAGTGCCTTGCCATCATGCTTAAAAGTTTGGCTAGTATATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR GCA 90 bp AAGGCACTGCTGAAAGAGGCTTTGGCCAGTAGAACAAATTACCATTaGACACAACAATATGATAGAAAGCACTACTGTCCAAACCAAACC +
Preference number: 1 (lower is better)
Translates to: KALLKEALASRTNYH*TQQYDRKHYCPNQT
Trigger: GGTTTGGTTTGGACAGTAGTGCTTTCTATCATATTGTTGTGTGCAATGGTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAGTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR TCA 90 bp CAAAGAGGTTTTAATTTCACAGCATCTCCAACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGG +
Preference number: 1 (lower is better)
Translates to: QRGFNFTASPTVHFG*CGPFCIEQKFSNGR
Trigger: CCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAATTAAAACCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR GCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTC +
Preference number: 1 (lower is better)
Translates to: HSVLSRNFLMEGRFL*RTTTEDFHLTLQQF
Trigger: GAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR GCA 90 bp TGTCTCAGGTACAAAGAGGTTTTAATTTCACAGCATCTCCAACAGTaGACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGAAATTTT +
Preference number: 1 (lower is better)
Translates to: CLRYKEVLISQHLQQ*TLGDVDHSVLSRNF
Trigger: AAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAATTAAAACCTCTTTGTACCTGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR GCA 90 bp ATGATAGAAAGCACTACTGTCCAAACCAAACCAGACACTACAATCTaGTATTTATTTGACAAAGTCAGTTTCCAGAGAGAATCTAGGCAA +
Preference number: 1 (lower is better)
Translates to: MIESTTVQTKPDTTI*YLFDKVSFQRESRQ
Trigger: TTGCCTAGATTCTCTCTGGAAACTGACTTTGTCAAATAAATAGCAGATTGTAGTGTCTGGTTTGGTTTGGACAGTAGTGCTTTCTATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 90 bp CAAGGAAACGGAGTCAAATTGCAATTAAGATTAACTTTGGTTATATaGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGG +
Preference number: 1 (lower is better)
Translates to: QGNGVKLQLRLTLVI*KQESCFSSSIASLW
Trigger: CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAGTTAATCTTAATTGCAATTTGACTCCGTTTCCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR TCA 90 bp ACTATACCTTCTCTTGGTAGTAAAATTGTATGCAATTGTTGCCAATaGCTACATACAACTGTATCCTATTTGTGCTACTTTCCTCACTGT +
Preference number: 1 (lower is better)
Translates to: TIPSLGSKIVCNCCQ*LHTTVSYLCYFPHC
Trigger: ACAGTGAGGAAAGTAGCACAAATAGGATACAGTTGTATGTAGTCATTGGCAACAATTGCATACAATTTTACTACCAAGAGAAGGTATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp CTCCCGTGGCATCGGGCTTGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGACTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: LPWHRACGCALFRPPQGGLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...TCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp GAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 2 (lower is better)
Translates to: ESGHDSQSPKGLRGPQGRKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...CCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
3UTR-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCA +
Preference number: 2 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTRQRKA*PLPWRS
Trigger: TGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 2 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
3UTR-3UTR CCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
3UTR-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCATGCAGCTGTGTGTaGTCGTGGCTGTGCTCATGT +
Preference number: 2 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTACSCV*SWLCSC
Trigger: ACATGAGCACAGCCACGACCACACACAGCTGCATGC...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CAA 90 bp GCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTaGGTTCCCTGCTGCCTGAAGATGCATTTGAGCCCTATGAGATTA +
Preference number: 2 (lower is better)
Translates to: ASKLFLQSRRPVPRC*VPCCLKMHLSPMRL
Trigger: TAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR GCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACACCCAGAACCAGGGCTaGCACTTCCAGGCGGCTGAG +
Preference number: 2 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDTQNQG*HFQAAE
Trigger: CTCAGCCGCCTGGAAGTGGCAGCCCTGGTTCTGGGT...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 2 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp CTCCCGTGGCATCGGGCTTGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGATGTGTTTCACTTGCTTaGTGGTGTTTTCTTTACTGT +
Preference number: 2 (lower is better)
Translates to: LPWHRACGCALFRPPQGGCVSLA*WCFLYC
Trigger: ACAGTAAAGAAAACACCACCAAGCAAGTGAAACACA...TCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CCA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGGCCTCTCCCTCCCGTaGCATCGGGCTTGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: WTLGIHVEMRKVRQETEEGLSLP*HRACGC
Trigger: ACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCC...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CCA 90 bp CTCCCGTGGCATCGGGCTTGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGAGTTTCACTTGCTTGGTaGTGTTTTCTTTACTGTAAA +
Preference number: 2 (lower is better)
Translates to: LPWHRACGCALFRPPQGGVSLAW*CFLYCK
Trigger: TTTACAGTAAAGAAAACACCACCAAGCAAGTGAAAC...TCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CAA 90 bp AGGCCTGTGCCACGCTGCTTGGTTCCCTGCTGCCTGAAGATGCATTaGAGCCCTATGAGATTAGTATGGCTATTTCTGTCTGCTGACCAG +
Preference number: 2 (lower is better)
Translates to: RPVPRCLVPCCLKMH*SPMRLVWLFLSADQ
Trigger: CTGGTCAGCAGACAGAAATAGCCATACTAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CAA 90 bp GCTGCAGCATGGACAACCAGACCCAGCGTGGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCTGGATCGTCAGTAGAATGCACATGG +
Preference number: 2 (lower is better)
Translates to: AAAWTTRPSVVVILE*LDLAASGSSVECTW
Trigger: CCATGTGCATTCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCACCACGCTGGGTCTGGTTGTCCATGCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp AAGAGGGCCCTGAAAGGTTTGCTTGTTAATAGTGAGGTCCAGAGGGGAAGGCAAAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 2 (lower is better)
Translates to: KRALKGLLVNSEVQRGRQKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...TTGCCTTCCCCTCTGGACCTCACTATTAACAAGCAAACCTTTCAGGGCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGCCTTTAGCATCTAAGTaGGTGGGTGCTATGACCTTC +
Preference number: 2 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTPLASK*VGAMTF
Trigger: GAAGGTCATAGCACCCACTCACTTAGATGCTAAAGG...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 2 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
3UTR-3UTR CCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 2 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
3UTR-3UTR TCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGGGTCCACCAGCAACATaGAAACGAAGCCCAGAACGA +
Preference number: 2 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVGPPAT*KRSPER
Trigger: TCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACC...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAAGTCAAGAAGGCCTGTaGCACGCTGCTTGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: SRGLTSFISTAADPVTNSSQEGL*HAAWFP
Trigger: AGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACT...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp GGACATAACTGGTGCTGCCAATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 2 (lower is better)
Translates to: GHNWCCQCKDQQVLSDSIAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...AATCGAATCAGAAAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CCA 90 bp TTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCCCATGGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: FKITVPAIEPGELQSYPMAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...CATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
3UTR-3UTR CCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 2 (lower is better)
Translates to: SRGLTSFISTAADPVTNSDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR GCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTT +
Preference number: 2 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQLNTLR*WCVLLV
Trigger: AACTAAGAGGACACACCAGCATCGGAGTGTATTAAG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR-3UTR GCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGTGTGGTCGTGGCTGTaGTCATGTTCATGGACAACT +
Preference number: 2 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSVWSWL*SCSWTT
Trigger: AGTTGTCCATGAACATGAGCACAGCCACGACCACAC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTACCTTTAGCATCTAAGTaGGTGGGTGCTATGACCTTC +
Preference number: 2 (lower is better)
Translates to: LATGGYVRRHSVAKADLVPLASK*VGAMTF
Trigger: GAAGGTCATAGCACCCACTCACTTAGATGCTAAAGG...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTAGAGGAAAACGGAACTaGAATGTGCCAAGAAGTGAA +
Preference number: 2 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVRGKRN*NVPRSE
Trigger: TTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCT...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDLHLME*QAGFRE
Trigger: CTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTACTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LATGGYVRRHSVAKADLVLHLME*QAGFRE
Trigger: CTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAG...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp AATCCTTGCCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACTTTTGTAAGCAGCAAATTGTaGCGAGGAGAGGCTAGAGGG +
Preference number: 2 (lower is better)
Translates to: NPCRSSRLHPARYTSQTFVSSKL*RGEARG
Trigger: CCCTCTAGCCTCTCCTCGCCACAATTTGCTGCTTAC...AAAAGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCCTATGAGATTAGTATaGCTATTTCTGTCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQPMRLV*LFLSAD
Trigger: GTCAGCAGACAGAAATAGCCATACTAATCTCATAGG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp AATCCTTGCCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACTTTTAGTGAGTGGGTGCTATaGCCTTCCATCAACGCATGT +
Preference number: 2 (lower is better)
Translates to: NPCRSSRLHPARYTSQTFSEWVL*PSINAC
Trigger: ACATGCGTTGATGGAAGGTCATAGCACCCACTCACT...AAAAGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 2 (lower is better)
Translates to: CVIENVFTNYYVHCPEETDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp GAAAACGGAACTGAAATGTGCCAAGAAGTGAACACGGACATGGCCTCTCCTGGAAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: ENGTEMCQEVNTDMASPGRGRQI*KSDGSI
Trigger: GATTGAACCATCTGACTTCCAAATTTGCCTTCCCCT...TCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAGACACTTTGTGATCTaGCTGTTCTTGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDRHFVI*LFLKES
Trigger: GCTTTCCTTCAAGAACAGTCAGATCACAAAGTGTCT...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAACTACAGGTGGTTATGTaGGAAGACACAGTGTCGCCA +
Preference number: 2 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKLQVVM*EDTVSP
Trigger: TGGCGACACTGTGTCTTCTCACATAACCACCTGTAG...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR GCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 2 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTAGCTGTGTGTGGTCGTaGCTGTGCTCATGTTCATGG +
Preference number: 2 (lower is better)
Translates to: CVIENVFTNYYVHCPEETSCVWS*LCSCSW
Trigger: CCATGAACATGAGCACAGCCACGACCACACACAGCT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CAA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: QHLQQCTLGDVDHSV*SRNFLMEGRFLCRT
Trigger: TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR-3UTR TCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAACTCTCCTGCTCCATTTaGTGGAATGGCAGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: LNKAAFDTKVISLKGDKELSCSI*WNGRLD
Trigger: ATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAG...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: SRGLTSFISTAADPVTNSIQRGT*QRSCLN
Trigger: ATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAAT...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR GCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAGGATCGTCAGTAGAATaGACATGGGAGTTACCAATC +
Preference number: 2 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEGSSVE*TWELPI
Trigger: GATTGGTAACTCCCATGTGCATTCTACTGACGATCC...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp AAAACTGAATCAAACCTGGAACATCACTGCTTTCTTGAAATGGAACTGACAAGCAGTGAGTGGGTGCTATaGCCTTCCATCAACGCATGT +
Preference number: 2 (lower is better)
Translates to: KTESNLEHHCFLEMELTSSEWVL*PSINAC
Trigger: ACATGCGTTGATGGAAGGTCATAGCACCCACTCACT...GCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTCCTTTAGCATCTAAGTaGGTGGGTGCTATGACCTTC +
Preference number: 2 (lower is better)
Translates to: CVIENVFTNYYVHCPEETPLASK*VGAMTF
Trigger: GAAGGTCATAGCACCCACTCACTTAGATGCTAAAGG...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAACTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAAT +
Preference number: 2 (lower is better)
Translates to: WTLGIHVEMRKVRQETEELQRRT*QGMLQN
Trigger: ATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAG...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR TCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATCTACAGGTGGTTATGTaGGAAGACACAGTGTCGCCA +
Preference number: 2 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYLQVVM*EDTVSP
Trigger: TGGCGACACTGTGTCTTCTCACATAACCACCTGTAG...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTACCTCACCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 2 (lower is better)
Translates to: CVIENVFTNYYVHCPEETTSPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CCA 90 bp AAGAGGGCCCTGAAAGGTTTGCTTGTTAATAGTGAGGTCCAGAGGGGAAGGCAAATCAAGGAAGTCATTTaGACTTTCCATACTATACCT +
Preference number: 2 (lower is better)
Translates to: KRALKGLLVNSEVQRGRQIKEVI*TFHTIP
Trigger: AGGTATAGTATGGAAAGTCCAAATGACTTCCTTGAT...TTGCCTTCCCCTCTGGACCTCACTATTAACAAGCAAACCTTTCAGGGCCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAATCAGTAGAATGCACATaGGAGTTACCAATCTGGTCC +
Preference number: 2 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKSVECT*ELPIWS
Trigger: GGACCAGATTGGTAACTCCCATGTGCATTCTACTGA...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR TCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAGTGTCAATTTACACATaGGGAGGTGGTATTTTAAGG +
Preference number: 2 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEVSIYT*GGGILR
Trigger: CCTTAAAATACCACCTCCTCATGTGTAAATTGACAC...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR GCA 90 bp CTGACCAGGAGAGAAATGAGTAGTTCTCGAGGCAGCAGCTTTAAAATCTGGGAAATTTATGATCCATCTTaGTACAGGTGGTTATGTGAG +
Preference number: 2 (lower is better)
Translates to: LTRREMSSSRGSSFKIWEIYDPS*YRWLCE
Trigger: CTCACATAACCACCTGTAGCAAGATGGATCATAAAT...TTCCCAGATTTTAAAGCTGCTGCCTCGAGAACTACTCATTTCTCTCCTGGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGAT +
Preference number: 2 (lower is better)
Translates to: NLLVLSHWVRLSISREFLEGRFL*RTTTED
Trigger: ATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTC...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CAA 90 bp AGCCAAACTTTTAAGCATGATGGCAAGGCACTGCTGAAAGAGGCTTaGGCCAGTAGAACAAATTACCATTGCACACAACAATATGATAGA +
Preference number: 2 (lower is better)
Translates to: SQTFKHDGKALLKEA*ASRTNYHCTQQYDR
Trigger: TCTATCATATTGTTGTGTGCAATGGTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAGTGCCTTGCCATCATGCTTAAAAGTTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGCAGCTGCTGATCCAGTaGCAAATTCATGAAGGAAAT +
Preference number: 2 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEQLLIQ*QIHEGN
Trigger: ATTTCCTTCATGAATTTGTCACTGGATCAGCAGCTG...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTTGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAG +
Preference number: 2 (lower is better)
Translates to: CVIENVFTNYYVHCPEETWRQVF*KGELDK
Trigger: CTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCA...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAACTACTACGTCCACTaGCCTGAAGAAACTAGTCTT +
Preference number: 2 (lower is better)
Translates to: NLLVLSHWVRLSISREFLNYYVH*PEETSL
Trigger: AAGACTAGTTTCTTCAGGGCAGTGGACGTAGTAGTT...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTAACCTCACCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 2 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLTSPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGT...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATTGGGAGTTACCAATCTaGTCCACCAGCAACATGAAA +
Preference number: 2 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYWELPI*STSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCA...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR GCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTAACGGAACTGAAATGTaGCAAGAAGTGAACACGGAC +
Preference number: 2 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFNGTEM*QEVNTD
Trigger: GTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTT...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATC +
Preference number: 2 (lower is better)
Translates to: LVIWKQESCFSSSIASLWRGRQI*KSDGSI
Trigger: GATTGAACCATCTGACTTCCAAATTTGCCTTCCCCT...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGATCTAATCCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 2 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRSNPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGATTAGA...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555840.5
3UTR-3UTR CCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAAGGAGGACATGTACTGTaGCAACATAAAGAAATGTCC +
Preference number: 2 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEGGHVL*QHKEMS
Trigger: GGACATTTCTTTATGTTGCCACAGTACATGTCCTCC...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CAA 90 bp GGAGCAGTAGTATTCTTTAACTTAATTTGCCATTTAAGAGAGCACTaGGAATCTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAA +
Preference number: 2 (lower is better)
Translates to: GAVVFFNLICHLREH*ESEESLSLPRKRSQ
Trigger: TTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAGATTCCAAGTGCTCTCTTAAATGGCAAATTAAGTTAAAGAATACTACTGCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CAA 90 bp AGGTACAAAGAGGTTTTAATTTCACAGCATCTCCAACAGTGCACTTaGGGTGATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATG +
Preference number: 2 (lower is better)
Translates to: RYKEVLISQHLQQCT*GDVDHSVLSRNFLM
Trigger: CATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAATTAAAACCTCTTTGTACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR-3UTR TCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTAGAGGAAAACGGAACTaGAATGTGCCAAGAAGTGAA +
Preference number: 2 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFRGKRN*NVPRSE
Trigger: TTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCT...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAGGCATGCTAGCTTATaGGTCATAGAAAACGTTTTT +
Preference number: 2 (lower is better)
Translates to: NLLVLSHWVRLSISREFLRHASL*VIENVF
Trigger: AAAAACGTTTTCTATGACGCATAAGCTAGCATGCCT...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CAA 90 bp TATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTaGGTAGCCAATAATTCCATCTGTAATCATGGCAGCAACTTAAGT +
Preference number: 2 (lower is better)
Translates to: YMEARIMLLIINCVS*VANNSICNHGSNLS
Trigger: ACTTAAGTTGCTGCCATGATTACAGATGGAATTATTGGCTACCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR TCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGTGTCAATTTACACATaGGGAGGTGGTATTTTAAGG +
Preference number: 2 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFVSIYT*GGGILR
Trigger: CCTTAAAATACCACCTCCTCATGTGTAAATTGACAC...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp CGGCTGAGGCCTCTCCCTCCCGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCCACCTCAGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: RLRPLPPVASGL*LCPIPPTSGRT
Trigger: TGTCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCCTCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 72 bp AGGCCTCTCCCTCCCGTGGCATCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCAGGGAGGACATGTACT +
Preference number: 3 (lower is better)
Translates to: RPLPPVASGLWL*PIPPTSGRTCT
Trigger: AGTACATGTCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 72 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAAGGCTGGACCTTGAAC +
Preference number: 3 (lower is better)
Translates to: VSSCHVPAVLTG*QTALDQGWTLN
Trigger: GTTCAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
3UTR GCA 72 bp AAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTaGTTGGTTCCCTGCTGCCTGAAGATGCATTTGAGC +
Preference number: 3 (lower is better)
Translates to: KLFLQSRRPVPR*LVPCCLKMHLS
Trigger: GCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp AAGCTCCTCCCACCTCTCCTGCTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAGGCACGTGCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: KLLPPLLLHLME*QAGFREARAKG
Trigger: TCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGGAGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 72 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGCCAAAGGAGCTGTTTA +
Preference number: 3 (lower is better)
Translates to: PTSPAPFDGMAG*IQRGTCQRSCL
Trigger: TAAACAGCTCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 72 bp AATGTGCCAAGAAGTGAACACGGACATGGCCTCTCCTaGAATACTGCCCACCATGCCAGCAAGCTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: NVPRSEHGHGLS*NTAHHASKLFL
Trigger: GAGGAAGAGCTTGCTGGCATGGTGGGCAGTATTCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp GAAATGTCCCGGCAGAGAAAAGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGGCTTCTTTACTGCTCT +
Preference number: 3 (lower is better)
Translates to: EMSRQRKAWPLP*RSPLKGLLYCS
Trigger: AGAGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCGGGACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 72 bp CAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCTaGTGCCTGAAGATGCATTTGAGCCCTATGAGATTA +
Preference number: 3 (lower is better)
Translates to: QSRRPVPRCLVP*CLKMHLSPMRL
Trigger: TAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp TGGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTT +
Preference number: 3 (lower is better)
Translates to: WQHKEMSRQRKA*PLPWRSPLKGL
Trigger: AAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 72 bp GCCCTATTCCGCCCACCTCAGGGAGGACATGTACTGTaGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCA +
Preference number: 3 (lower is better)
Translates to: ALFRPPQGGHVL*QHKEMSRQRKA
Trigger: TGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATGTCCTCCCTGAGGTGGGCGGAATAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 72 bp TCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCTGCTaGCTGAAGATGCATTTGAGCCCTATGAGATTAGTA +
Preference number: 3 (lower is better)
Translates to: SRRPVPRCLVPC*LKMHLSPMRLV
Trigger: TACTAATCTCATAGGGCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTCCTGTGCCACGCTGCTaGGTTCCCTGCTGCCTGAAG +
Preference number: 3 (lower is better)
Translates to: CVIENVFTNYYVHCPEETPVPRC*VPCCLK
Trigger: CTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGG...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAACCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCG +
Preference number: 3 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEPVASG*WLCPIP
Trigger: CGGAATAGGGCACAGCCACAAGCCCGATGCCACGGG...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR TCA 72 bp CTGGTGCTGCCAATGCAAAGACCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGCCAGCATGCATCAAGA +
Preference number: 3 (lower is better)
Translates to: LVLPMQRPASAF*FDSALSQHASR
Trigger: TCTTGATGCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATTGGCAGCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 72 bp TTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAATCCCTCTAGACATCCC +
Preference number: 3 (lower is better)
Translates to: FDGMAGWIQRGT*QRSCLNPSRHP
Trigger: GGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 72 bp GACATAACTGGTGCTGCCAATGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGCTCTAAGCCAGCATGC +
Preference number: 3 (lower is better)
Translates to: DITGAANAKTSK*FLIRFRSKPAC
Trigger: GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 72 bp GGATCGTCAGTAGAATGCACATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAAACGAAGCCCAGAACG +
Preference number: 3 (lower is better)
Translates to: GSSVECTWELPI*STSNMKTKPRT
Trigger: CGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CAA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGATGTGTTTCACTTGCTaGGTGGTGTTTTCTTTACTG +
Preference number: 3 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTMCFTC*VVFSLL
Trigger: CAGTAAAGAAAACACCACCAAGCAAGTGAAACACAT...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR CCA 72 bp TACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTAATCCTCCCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: YHVFQGLNTLRC*CVLLVLILPSG
Trigger: TCCAGAGGGGAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555840.5
3UTR CCA 72 bp GACCTTGCTGCTTCTGGATCGTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCCACCAGCAACATGAAA +
Preference number: 3 (lower is better)
Translates to: DLAASGSSVECT*ELPIWSTSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGATCCAGAAGCAGCAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR-3UTR CAA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGCAGTAAGCAGCAAATaGTGGCGAGGAGAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKAVSSK*WRGEAR
Trigger: TCTAGCCTCTCCTCGCCACAATTTGCTGCTTACTGC...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CAA 90 bp AGGGAGGACATGTACTGTGGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATAGCGTGGTGGTGATTTaGGAATTGCTAGACCTTGCT +
Preference number: 3 (lower is better)
Translates to: REDMYCGNIKKCPGREKHSVVVI*ELLDLA
Trigger: AGCAAGGTCTAGCAATTCCAAAATCACCACCACGCT...ATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR GCA 72 bp GGGAAGGCAAATTTGGAAGTCAGATGGTTCAATCCTTaGCGGAGTTCAAGGCTCCATCCAGCAAGATATACT +
Preference number: 3 (lower is better)
Translates to: GKANLEVRWFNP*RSSRLHPARYT
Trigger: AGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR GCA 72 bp GGCAGTTTTAAACAAGAGGAAAACGGAACTGAAATGTaGCAAGAAGTGAACACGGACATGGCCTCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: GSFKQEENGTEM*QEVNTDMASPG
Trigger: TCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCTTGTTTAAAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp GAAAACGGAACTGAAATGTGCCAAGAAGTGAACACGGACATGGCCTCTCCTGGATCTGCAAAGGAGAACTaGACAAGGAATGCTACAAAA +
Preference number: 3 (lower is better)
Translates to: ENGTEMCQEVNTDMASPGSAKEN*TRNATK
Trigger: TTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGA...TCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp CTTGTTAATAGTGAGGTCCAGAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATCCTTGCCGGAGTTCAA +
Preference number: 3 (lower is better)
Translates to: LVNSEVQRGRQI*KSDGSILAGVQ
Trigger: TTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTCTGGACCTCACTATTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp TGCCTGAAGATGCATTTGAGCCCTATGAGATTAGTATaGCTATTTCTGTCTGCTGACCAGGAGAGAAATGAG +
Preference number: 3 (lower is better)
Translates to: CLKMHLSPMRLV*LFLSADQERNE
Trigger: CTCATTTCTCTCCTGGTCAGCAGACAGAAATAGCCATACTAATCTCATAGGGCTCAAATGCATCTTCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp ACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTaGATGAATCTGGTCATGATTCTCAGTCTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: TTEDFHLTLQQF*MNLVMILSLPR
Trigger: CCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR-3UTR CAA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTAGCAGTAAGCAGCAAATaGTGGCGAGGAGAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLAVSSK*WRGEAR
Trigger: TCTAGCCTCTCCTCGCCACAATTTGCTGCTTACTGC...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR GCA 72 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAGGAATGCTACAAAATA +
Preference number: 3 (lower is better)
Translates to: LGSSLGMWRQVF*KGELDKECYKI
Trigger: TATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 72 bp AGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTTCTAATCCTTGAAAAA +
Preference number: 3 (lower is better)
Translates to: SYHVFQGLNTLR*WCVLLVLILEK
Trigger: TTTTTCAAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CCA 72 bp TACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTAATCCTTGAAAAAGAG +
Preference number: 3 (lower is better)
Translates to: YHVFQGLNTLRC*CVLLVLILEKE
Trigger: CTCTTTTTCAAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGGAGGGGAAGGCAAATTaGGAAGTCAGATGGTTCAAT +
Preference number: 3 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEEGKAN*EVRWFN
Trigger: ATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTC...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAGGGCCCTGAAAGGTTaGCTTGTTAATAGTGAGGTC +
Preference number: 3 (lower is better)
Translates to: LVIWKQESCFSSSIASLWRALKG*LVNSEV
Trigger: GACCTCACTATTAACAAGCAAACCTTTCAGGGCCCT...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR-3UTR CAA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 3 (lower is better)
Translates to: CVIENVFTNYYVHCPEETVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628474.2
3UTR TCA 72 bp AGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAATACCAGTCACCTCTTT +
Preference number: 3 (lower is better)
Translates to: RNVETGILQRRT*QGMLQNTSHLF
Trigger: AAAGAGGTGACTGGTATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR GCA 72 bp ATCAATAGGCAAACACTTCTCATTTATGATCCATCTTaGTACAGGTGGTTATGTGAGAAGACACAGTGTCGC +
Preference number: 3 (lower is better)
Translates to: INRQTLLIYDPS*YRWLCEKTQCR
Trigger: GCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAGATGGATCATAAATGAGAAGTGTTTGCCTATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR CCA 72 bp CAGATTAGTGATTGTGTCAATTTACACATGAGGAGGTaGTATTTTAAGGGCTCAACAAAGCGGCATTTGACA +
Preference number: 3 (lower is better)
Translates to: QISDCVNLHMRR*YFKGSTKRHLT
Trigger: TGTCAAATGCCGCTTTGTTGAGCCCTTAAAATACCACCTCCTCATGTGTAAATTGACACAATCACTAATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR-3UTR CAA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATTCTGCAAAGGAGAACTaGACAAGGAATGCTACAAAA +
Preference number: 3 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYSAKEN*TRNATK
Trigger: TTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGA...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
3UTR TCA 72 bp TTTAATTTCACAGCATCTCCAACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATTGAGCAGAAATTTTCT +
Preference number: 3 (lower is better)
Translates to: FNFTASPTVHFG*CGPFCIEQKFS
Trigger: AGAAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR GCA 72 bp TTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGATTTTCACTTAACACTG +
Preference number: 3 (lower is better)
Translates to: LSRNFLMEGRFL*RTTTEDFHLTL
Trigger: CAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CCA 72 bp AAAAAGATCAAAGCCAATCTCCTTGTGTTAAGCCACTaGGTTAGGCTGAGTATATCTAGAGAATTCCTAAAT +
Preference number: 3 (lower is better)
Translates to: KKIKANLLVLSH*VRLSISREFLN
Trigger: ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATTGGCTTTGATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CCA 72 bp GGAGTCAAATTGCAATTAAGATTAACTTTGGTTATATaGAAGCAAGAATCATGCTTCTCATCATCAATTGCG +
Preference number: 3 (lower is better)
Translates to: GVKLQLRLTLVI*KQESCFSSSIA
Trigger: CGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAGTTAATCTTAATTGCAATTTGACTCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CAA 72 bp AGGCGGCTGAGGCCTCTCCCTCCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RRLRPLPPVASG*WLCPIPPTSGR
Trigger: CCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCCTCAGCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTCACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACT +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAHSTGP*PGVADT
Trigger: AGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTG...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp CTCCCGTGGCATCGGGCTTGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGATCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LPWHRACGCALFRPPQGGSGLWL*PIPPTS
Trigger: TGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGA...TCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDVASGL*LCPIPP
Trigger: GGGCGGAATAGGGCACAGCCACAAGCCCGATGCCAC...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGAGGCACCTTCCTCTTaGACGTACCCGGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAEAPSS*TYPATD
Trigger: GTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTC...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLRQRKA*PLPWRS
Trigger: TGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CGGCAGAGAAAAGCATGGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTGGCCTCTCCCTCCCGTaGCATCGGGCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQRKAWPLPWRSPLKGLLGLSLP*HRACGC
Trigger: ACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCC...AAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGGCGGCGGCGGGTAAGTaGCTCAAGCGAACCTGTTCG +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTAAAGK*LKRTCS
Trigger: CGAACAGGTTCGCTTGAGTCACTTACCCGCCGCCGC...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACGAGGCACCTTCCTCTTaGACGTACCCGGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDEAPSS*TYPATD
Trigger: GTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTC...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGACTCTCCTCCGAGCCTaGGATGAGGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLTLLRA*DEERSP
Trigger: AGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGT...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGCGTGGCGTTCACCTCTaGAAGGGCTTCTTTACTGCT +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLRGVHL*KGFFTA
Trigger: AGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACG...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCCTCTCCTGGAATACTaGCCACCATGCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDPLLEY*PPCQQA
Trigger: AGCTTGCTGGCATGGTGGGCAGTATTCCAGGAGAGG...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACACTCTCCTCCGAGCCTaGGATGAGGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDTLLRA*DEERSP
Trigger: AGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGT...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGAGCTGTGTGTGGTCGTaGCTGTGCTCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLSCVWS*LCSCSW
Trigger: CCATGAACATGAGCACAGCCACGACCACACACAGCT...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCACACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACT +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSHSTGP*PGVADT
Trigger: AGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTG...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR TCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGAAATGTGCCAAGAAGTaGACACGGACATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLKCAKK*TRTWPL
Trigger: GAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTT...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTPYTRC*PWYCTR
Trigger: TCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGG...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGTCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTSGLWL*PIPPTS
Trigger: TGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGA...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTGGCCTCTCCCTCCCGTaGCATCGGGCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVGLSLP*HRACGC
Trigger: ACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCC...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACT +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGHSTGP*PGVADT
Trigger: AGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTG...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR TCA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCCCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGPPSLG*GKESCR
Trigger: CCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGG...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTGCGGCGGCGGGTAAGTaGCTCAAGCGAACCTGTTCG +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVAAAGK*LKRTCS
Trigger: CGAACAGGTTCGCTTGAGTCACTTACCCGCCGCCGC...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCGCGGCGGCGGGTAAGTaGCTCAAGCGAACCTGTTCG +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLAAAGK*LKRTCS
Trigger: CGAACAGGTTCGCTTGAGTCACTTACCCGCCGCCGC...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGCTTCGATTGTCGGATTaGGGGTGGCACAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLLRLSD*GWHNVL
Trigger: TAAGACATTGTGCCACCCTCAATCCGACAATCGAAG...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QFWMNLVMILSLPRGSGALLQAR*LPEQFH
Trigger: GTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAG...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp TGCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCACTGTTCCAGCTATTaGACCAGGGGAACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CQQALPPVKKACATLLGSHCSSY*TRGTAV
Trigger: GACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTG...GGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFTQSCL*PIPGAA
Trigger: GGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGT...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTACCCAGAACCAGGGCTaGCACTTCCAGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVTQNQG*HFQAAE
Trigger: CTCAGCCGCCTGGAAGTGGCAGCCCTGGTTCTGGGT...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAAGTCAAGAAGGCCTGTaGCACGCTGCTTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGSQEGL*HAAWFP
Trigger: AGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACT...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACTCCTTTGGGGGTTTGTaGTGCTGTCATACGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDSFGGL*CCHTVP
Trigger: AGGAACCGTATGACAGCAGCACAAACCCCCAAAGGA...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACGTGTGGTCGTGGCTGTaGTCATGTTCATGGACAACT +
Preference number: 4 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDVWSWL*SCSWTT
Trigger: AGTTGTCCATGAACATGAGCACAGCCACGACCACAC...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCACTCTCCTCCGAGCCTaGGATGAGGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSTLLRA*DEERSP
Trigger: AGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGT...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGGGCAGGAACATCCTTTaGGGGTTTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ESGHDSQSPKGLRGPQGRGRNIL*GFVLLS
Trigger: TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC...CCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CAA 72 bp TCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTaGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SGAHKAGTSFGG*CCCHTVPVFSP
Trigger: GGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGAGAGCACTTGGAATCTaGAGAAAGTCTATCCCTACC +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLRALGI*RKSIPT
Trigger: GGTAGGGATAGACTTTCTTCAGATTCCAAGTGCTCT...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCTGCCCTATACCCGGTaGTGCCCATGGTACTGCACT +
Preference number: 4 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQLPYTR*CPWYCT
Trigger: AGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QFWMNLVMILSLPRGSGATQSCL*PIPGAA
Trigger: GGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGT...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCAAACTGGTGCTGCCAATaGAAAGACCAGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GLRGPQGRNILWGFVLLSNWCCQ*KDQQVL
Trigger: AAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTT...TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCATCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSSGLWL*PIPPTS
Trigger: TGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGA...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp ATGCACATGGGAGTTACCAATCTGGTCCACCAGCAACATGAAAACGAAGCCCAGACCCAGAACCAGGGCTaGCACTTCCAGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MHMGVTNLVHQQHENEAQTQNQG*HFQAAE
Trigger: CTCAGCCGCCTGGAAGTGGCAGCCCTGGTTCTGGGT...CTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGAGGCCTGTGCCACGCTaGTTGGTTCCCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGRPVPR*LVPCCL
Trigger: CAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCT...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTAACGGAACTGAAATGTaGCAAGAAGTGAACACGGAC +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKANGTEM*QEVNTD
Trigger: GTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTT...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCAGTGGTTCCAAGAGAGTaGGCTTTCCAGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GLRGPQGRNILWGFVLLSVVPRE*AFQFFR
Trigger: CCTAAAGAACTGGAAAGCCCACTCTCTTGGAACCAC...TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTTTCTTTAAACAGGTGTaGTGGTTCCAAGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAFFKQV*WFQESG
Trigger: CCCACTCTCTTGGAACCACCACACCTGTTTAAAGAA...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSAWPLP*RSPLKG
Trigger: CCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGC...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLSVECT*ELPIWS
Trigger: GGACCAGATTGGTAACTCCCATGTGCATTCTACTGA...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTGAGGCACCTTCCTCTTaGACGTACCCGGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVEAPSS*TYPATD
Trigger: GTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTC...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVLLQAR*LPEQFH
Trigger: GTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCAGTGAGTGGGTGCTATaGCCTTCCATCAACGCATGT +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFSEWVL*PSINAC
Trigger: ACATGCGTTGATGGAAGGTCATAGCACCCACTCACT...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCTTCCTTCAGGCCTCCTaGGGTGAATCTAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFFLQAS*GESRCL
Trigger: GAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAA...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCGGTCCACCAGCAACATaGAAACGAAGCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: QFWMNLVMILSLPRGSGAGPPAT*KRSPER
Trigger: TCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACC...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGTGCTGCCCATGGTACTaGACTCGACCGGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVCCPWY*TRPGLD
Trigger: GTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCA...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp AGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: RNILWGFVLLSYGSCVQSPYTRC*PWYCTR
Trigger: TCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGG...GGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCCTGCCCTATACCCGGTaGTGCCCATGGTACTGCACT +
Preference number: 4 (lower is better)
Translates to: KAGTSFGGLCCCHTVPVFLPYTR*CPWYCT
Trigger: AGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAG...GAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACACATGGACATAACTGGTaGTGCCAATGCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTHGHNW*CQCKDQ
Trigger: CTGGTCTTTGCATTGGCAGCACCAGTTATGTCCATG...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLIQRGT*QRSCLN
Trigger: ATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAAT...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCCAGCATCTCCAACAGTaGACTTTGGGTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSQHLQQ*TLGDVD
Trigger: GTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCAGGATCGTCAGTAGAATaGACATGGGAGTTACCAATC +
Preference number: 4 (lower is better)
Translates to: GLRGPQGRNILWGFVLLSGSSVE*TWELPI
Trigger: GATTGGTAACTCCCATGTGCATTCTACTGACGATCC...TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCCATCAGCTGCAGCATaGACAACCAGACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVPSAAA*TTRPSV
Trigger: CACGCTGGGTCTGGTTGTCCATGCTGCAGCTGATGG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCACCATCAGCTGCAGCATaGACAACCAGACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSPSAAA*TTRPSV
Trigger: CACGCTGGGTCTGGTTGTCCATGCTGCAGCTGATGG...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVAWPLP*RSPLKG
Trigger: CCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGC...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp CTTAACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGCCTCTCCCTCCCGTaGCATCGGGCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LNTAAVLDESGHDSQSPKGLSLP*HRACGC
Trigger: ACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCC...CTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp AAGAGGGCCCTGAAAGGTTTGCTTGTTAATAGTGAGGTCCAGAGGGGAAGGCAAGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KRALKGLLVNSEVQRGRQAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...TTGCCTTCCCCTCTGGACCTCACTATTAACAAGCAAACCTTTCAGGGCCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTGGACATGGCCTCTCCTaGAATACTGCCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVGHGLS*NTAHHA
Trigger: GGCATGGTGGGCAGTATTCCAGGAGAGGCCATGTCC...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: GLRGPQGRNILWGFVLLSWELPI*STSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCA...TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCACCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSPPSLG*GKESCR
Trigger: CCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGG...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAGCGGCGGCGGGTAAGTaGCTCAAGCGAACCTGTTCG +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSAAAGK*LKRTCS
Trigger: CGAACAGGTTCGCTTGAGTCACTTACCCGCCGCCGC...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGCTTCAGTCGTTCCTCTaGGAAATTAACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTLQSFL*EINSQG
Trigger: CCCTTGGCTGTTAATTTCTCAGAGGAACGACTGAAG...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp AGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RNILWGFVLLSYGSCVQSLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...GGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTTTCTGCTGCTTTGTCTaGTGCAATCACATTATGTGT +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAFCCFV*CNHIMC
Trigger: ACACATAATGTGATTGCATCAGACAAAGCAGCAGAA...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCGCCGATACTACAGCTaGCATGGCCGCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDRRYYS*HGRQVA
Trigger: TGCCACTTGGCGGCCATGGCAGCTGTAGTATCGGCG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLPYTRC*PWYCTR
Trigger: TCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGG...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLTQSCL*PIPGAA
Trigger: GGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGT...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAAACTGGTGCTGCCAATaGAAAGACCAGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGNWCCQ*KDQQVL
Trigger: AAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTT...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CGGCAGAGAAAAGCATGGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTCATGGACATAACTGGTaGTGCCAATGCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: RQRKAWPLPWRSPLKGLLHGHNW*CQCKDQ
Trigger: CTGGTCTTTGCATTGGCAGCACCAGTTATGTCCATG...AAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCAGATGGTTCAATCCTTaGCGGAGTTCAAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFRWFNP*RSSRLH
Trigger: ATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCT...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGATACTACAGCTGCCATaGCCGCCAAGTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQILQLP*PPSGIS
Trigger: AGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTAT...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR CCA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGAT +
Preference number: 4 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKADGKSQ*GKCAND
Trigger: ATCATTCGCACATTTTCCCCATTGACTTTTCCCATC...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTCCATCAGCTGCAGCATaGACAACCAGACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETPSAAA*TTRPSV
Trigger: CACGCTGGGTCTGGTTGTCCATGCTGCAGCTGATGG...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSAWPLP*RSPLKG
Trigger: CCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGGGCCTCTCCCTCCCGTaGCATCGGGCTTGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWGLSLP*HRACGC
Trigger: ACAGCCACAAGCCCGATGCCACGGGAGGGAGAGGCC...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp CTCCCGTGGCATCGGGCTTGTGGCTGTGCCCTATTCCGCCCACCTCAGGGAGGAATCAAGGAAGTCATTTaGACTTTCCATACTATACCT +
Preference number: 4 (lower is better)
Translates to: LPWHRACGCALFRPPQGGIKEVI*TFHTIP
Trigger: AGGTATAGTATGGAAAGTCCAAATGACTTCCTTGAT...TCCTCCCTGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGATGCCACGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAACCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEPPSLG*GKESCR
Trigger: CCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGG...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GAACTGCAGTCTTATCCCATGAGACTTCTAACTTGCTGGAAGATGCCACAAGAACCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ELQSYPMRLLTCWKMPQEPPSLG*GKESCR
Trigger: CCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGG...TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATGGGATAAGACTGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAGGGAAAATGTGCGAATaGTCGATTTCTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTGKMCE*SISSIV
Trigger: GACAATCGAAGAAATCGATCATTCGCACATTTTCCC...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGAGGCACCTTCCTCTTaGACGTACCCGGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDEAPSS*TYPATD
Trigger: GTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTC...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGCTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCGTGGCGTTCACCTCTaGAAGGGCTTCTTTACTGCT +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVRGVHL*KGFFTA
Trigger: AGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCCTCTCCTGCTCCATTTaGTGGAATGGCAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGLSCSI*WNGRLD
Trigger: ATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAG...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGGAGCTAAGAGGGCCCTaGAAGGTTTGCTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTELRGP*KVCLLI
Trigger: TATTAACAAGCAAACCTTTCAGGGCCCTCTTAGCTC...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp AAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCCACTGTTCCAGCTATTaGACCAGGGGAACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: KAGTSFGGLCCCHTVPVFHCSSY*TRGTAV
Trigger: GACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTG...GAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGTCCACCAGCAACATaGAAACGAAGCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSGPPAT*KRSPER
Trigger: TCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACC...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDPYTRC*PWYCTR
Trigger: TCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGG...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLTQSCL*PIPGAA
Trigger: GGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGT...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGAACTGGTGCTGCCAATaGAAAGACCAGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTNWCCQ*KDQQVL
Trigger: AAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTT...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTAGTCAAGAAGGCCTGTaGCACGCTGCTTGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGSQEGL*HAAWFP
Trigger: AGGGAACCAAGCAGCGTGGCACAGGCCTTCTTGACT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TGCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: CQQALPPVKKACATLLGSLNTLR*WCVLLV
Trigger: AACTAAGAGGACACACCAGCATCGGAGTGTATTAAG...GGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CGGCAGAGAAAAGCATGGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTGGATCGTCAGTAGAATaGACATGGGAGTTACCAATC +
Preference number: 4 (lower is better)
Translates to: RQRKAWPLPWRSPLKGLLGSSVE*TWELPI
Trigger: GATTGGTAACTCCCATGTGCATTCTACTGACGATCC...AAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTACTCTCCTCCGAGCCTaGGATGAGGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGTLLRA*DEERSP
Trigger: AGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGTTTAAACAGGTGTGGTaGTTCCAAGAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTFKQVW*FQESGL
Trigger: AAGCCCACTCTCTTGGAACCACCACACCTGTTTAAA...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLSSGFK*CLGSLN
Trigger: GTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGA...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGCACCATGGACATAACTaGTGCTGCCAATGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTHHGHN*CCQCKD
Trigger: GTCTTTGCATTGGCAGCACCAGTTATGTCCATGGTG...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDRQRKA*PLPWRS
Trigger: TGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GAACTGCAGTCTTATCCCATGAGACTTCTAACTTGCTGGAAGATGCCACAAGAAGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: ELQSYPMRLLTCWKMPQEVASGL*LCPIPP
Trigger: GGGCGGAATAGGGCACAGCCACAAGCCCGATGCCAC...TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATGGGATAAGACTGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCACCTCACCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 4 (lower is better)
Translates to: QFWMNLVMILSLPRGSGATSPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGT...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TGCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCAATTTGGAAGTCAGATaGTTCAATCCTTGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: CQQALPPVKKACATLLGSNLEVR*FNPCRS
Trigger: ACTCCGGCAAGGATTGAACCATCTGACTTCCAAATT...GGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTRGRQI*KSDGSI
Trigger: GATTGAACCATCTGACTTCCAAATTTGCCTTCCCCT...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTNTLRC*CVLLVL
Trigger: TAGAACTAAGAGGACACACCAGCATCGGAGTGTATT...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACACTTGTGTTAAGCCACTaGGTTAGGCTGAGTATATCT +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTLVLSH*VRLSIS
Trigger: AGATATACTCAGCCTAACCCAGTGGCTTAACACAAG...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGCTGTGTGTGGTCGTaGCTGTGCTCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLSCVWS*LCSCSW
Trigger: CCATGAACATGAGCACAGCCACGACCACACACAGCT...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCTGGGAGTTACCAATCTaGTCCACCAGCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFWELPI*STSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCA...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSSVECT*ELPIWS
Trigger: GGACCAGATTGGTAACTCCCATGTGCATTCTACTGA...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATCACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACT +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNHSTGP*PGVADT
Trigger: AGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTG...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR TCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAACCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDEPPSLG*GKESCR
Trigger: CCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGG...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCGGGAAAATGTGCGAATaGTCGATTTCTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFGKMCE*SISSIV
Trigger: GACAATCGAAGAAATCGATCATTCGCACATTTTCCC...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTACTGGACACTGGTCTGTaGAGTAGATGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVLDTGL*SRCCCS
Trigger: GGAGCAGCAGCATCTACTTCACAGACCAGTGTCCAG...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TATAGGCATGCAGCTGTGTGTGGTCGTGGCTGTGCTCATGTTCATGGACAACTGCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: YRHAAVCGRGCAHVHGQLPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...CAGTTGTCCATGAACATGAGCACAGCCACGACCACACACAGCTGCATGCCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp AATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCCGCTCTAAGCCAGCATGCAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: NAKTSKCFLIRFRSKPACKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAAGACACTTTGTGATCTaGCTGTTCTTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGRHFVI*LFLKES
Trigger: GCTTTCCTTCAAGAACAGTCAGATCACAAAGTGTCT...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCCTACAGGTGGTTATGTaGGAAGACACAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLLQVVM*EDTVSP
Trigger: TGGCGACACTGTGTCTTCTCACATAACCACCTGTAG...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CGGCAGAGAAAAGCATGGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTCAGCTGCTGATCCAGTaGCAAATTCATGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RQRKAWPLPWRSPLKGLLQLLIQ*QIHEGN
Trigger: ATTTCCTTCATGAATTTGTCACTGGATCAGCAGCTG...AAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCCTCACTTGGCTGTTTTaGATTGGGAAAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSLTWLF*IGKERG
Trigger: ACCTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAG...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCATTCCTTCAGGCCTCCTaGGGTGAATCTAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSFLQAS*GESRCL
Trigger: GAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAA...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGGCCACTGGGTTAGGCTaGGTATATCTAGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMATGLG*VYLENS
Trigger: GGAATTCTCTAGATATACTCAGCCTAACCCAGTGGC...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGGGTCCACCAGCAACATaGAAACGAAGCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGGPPAT*KRSPER
Trigger: TCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACC...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGCGCCGATACTACAGCTaGCATGGCCGCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWRRYYS*HGRQVA
Trigger: TGCCACTTGGCGGCCATGGCAGCTGTAGTATCGGCG...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR GCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSTQSCL*PIPGAA
Trigger: GGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGT...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCATGGACATAACTGGTaGTGCCAATGCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQHGHNW*CQCKDQ
Trigger: CTGGTCTTTGCATTGGCAGCACCAGTTATGTCCATG...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGCTGCTTGGTTCCCTaGTGCCTGAAGATGCATTTG +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLRCLVP*CLKMHL
Trigger: CAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCG...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCCAGCATCTCCAACAGTaGACTTTGGGTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGQHLQQ*TLGDVD
Trigger: GTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGATACTACAGCTGCCATaGCCGCCAAGTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVILQLP*PPSGIS
Trigger: AGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTAT...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp ATGCACATGGGAGTTACCAATCTGGTCCACCAGCAACATGAAAACGAAGCCCAGATACTACAGCTGCCATaGCCGCCAAGTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: MHMGVTNLVHQQHENEAQILQLP*PPSGIS
Trigger: AGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTAT...CTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTACCCGGTGCTGCCCATaGTACTGCACTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETTRCCP*YCTRPG
Trigger: GCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGAT +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTDGKSQ*GKCAND
Trigger: ATCATTCGCACATTTTCCCCATTGACTTTTCCCATC...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCGTGGTTCCAAGAGAGTaGGCTTTCCAGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GTSFGGLCCCHTVPVFSPVVPRE*AFQFFR
Trigger: CCTAAAGAACTGGAAAGCCCACTCTCTTGGAACCAC...GGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCTTCTTTAAACAGGTGTaGTGGTTCCAAGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QFWMNLVMILSLPRGSGAFFKQV*WFQESG
Trigger: CCCACTCTCTTGGAACCACCACACCTGTTTAAAGAA...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTAACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGCCATCAGCTGCAGCATaGACAACCAGACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LNTAAVLDESGHDSQSPKPSAAA*TTRPSV
Trigger: CACGCTGGGTCTGGTTGTCCATGCTGCAGCTGATGG...CTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CACAAGTTACACATTTCCTTCAGGCCTCCTGAGGTGAATCTAGATGTCTCAGGTCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: HKLHISFRPPEVNLDVSGRQRKA*PLPWRS
Trigger: TGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG...ACCTGAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAAATGTGTAACTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCGGAGGACATGTACTGTaGCAACATAAAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFGGHVL*QHKEMS
Trigger: GGACATTTCTTTATGTTGCCACAGTACATGTCCTCC...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKVASGL*LCPIPP
Trigger: GGGCGGAATAGGGCACAGCCACAAGCCCGATGCCAC...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTGTAAGCAGCAAATTGTaGCGAGGAGAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGVSSKL*RGEARG
Trigger: CCCTCTAGCCTCTCCTCGCCACAATTTGCTGCTTAC...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGTTACACATGAGGAGGTaGTATTTTAAGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: ESGHDSQSPKGLRGPQGRLHMRR*YFKGST
Trigger: TGTTGAGCCCTTAAAATACCACCTCCTCATGTGTAA...CCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCGGCAGGAACATCCTTTaGGGGTTTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLGRNIL*GFVLLS
Trigger: TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGCATGCAGCTGTGTGTaGTCGTGGCTGTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSACSCV*SWLCSC
Trigger: ACATGAGCACAGCCACGACCACACACAGCTGCATGC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCCTTCAGTCGTTCCTCTaGGAAATTAACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGLQSFL*EINSQG
Trigger: CCCTTGGCTGTTAATTTCTCAGAGGAACGACTGAAG...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAACTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSLGMWRQVFCKGELDKELLQAR*LPEQFH
Trigger: GTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAG...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGCTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLLLQAR*LPEQFH
Trigger: GTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAG...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CACAAGTTACACATTTCCTTCAGGCCTCCTGAGGTGAATCTAGATGTCTCAGGTAAGAGACTGAGGAAGTaGGTAGCTGTCACGTGCCGG +
Preference number: 4 (lower is better)
Translates to: HKLHISFRPPEVNLDVSGKRLRK*VAVTCR
Trigger: CCGGCACGTGACAGCTACTCACTTCCTCAGTCTCTT...ACCTGAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAAATGTGTAACTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGATTCTGCTGCTTTGTCTaGTGCAATCACATTATGTGT +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGFCCFV*CNHIMC
Trigger: ACACATAATGTGATTGCATCAGACAAAGCAGCAGAA...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCTTCTGCTGCTTTGTCTaGTGCAATCACATTATGTGT +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFFCCFV*CNHIMC
Trigger: ACACATAATGTGATTGCATCAGACAAAGCAGCAGAA...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTAGGTCCACCAGCAACATaGAAACGAAGCCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVGPPAT*KRSPER
Trigger: TCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACC...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp AATCCTTGCCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACTTTTCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGA +
Preference number: 4 (lower is better)
Translates to: NPCRSSRLHPARYTSQTFPYTRC*PWYCTR
Trigger: TCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGG...AAAAGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTSGFKW*LGSLNR
Trigger: CCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACT...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: KAGTSFGGLCCCHTVPVFAKTSK*FLIRFR
Trigger: GCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGC...GAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSAKTSK*FLIRFR
Trigger: GCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGC...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TATAGGCATGCAGCTGTGTGTGGTCGTGGCTGTGCTCATGTTCATGGACAACTGGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: YRHAAVCGRGCAHVHGQLAKTSK*FLIRFR
Trigger: GCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGC...CAGTTGTCCATGAACATGAGCACAGCCACGACCACACACAGCTGCATGCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCACATGGACATAACTGGTaGTGCCAATGCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSHGHNW*CQCKDQ
Trigger: CTGGTCTTTGCATTGGCAGCACCAGTTATGTCCATG...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACAAGGCATGCTAGCTTATaGGTCATAGAAAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: LVMILSLPRGSGAHKAGTRHASL*VIENVF
Trigger: AAAAACGTTTTCTATGACGCATAAGCTAGCATGCCT...TGTTCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTACGCTGCTTGGTTCCCTaGTGCCTGAAGATGCATTTG +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVRCLVP*CLKMHL
Trigger: CAAATGCATCTTCAGGCAGCAGGGAACCAAGCAGCG...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGAATACTGCCCACCATaGCAGCAAGCTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSEYCPP*QQALPP
Trigger: TGGAGGAAGAGCTTGCTGGCATGGTGGGCAGTATTC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGATGGAAGCAAGAATCATaGTTCTCATCATCAATTGCG +
Preference number: 4 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGWKQES*FSSSIA
Trigger: CGCAATTGATGATGAGAAGCATGATTCTTGCTTCCA...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTTTTGGGGGTTTGTGCTaGTGTCATACGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETFGGLC*CHTVPV
Trigger: CACAGGAACCGTATGACAGCAGCACAAACCCCCAAA...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGTTTGGGGGTTTGTGCTaGTGTCATACGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGFGGLC*CHTVPV
Trigger: CACAGGAACCGTATGACAGCAGCACAAACCCCCAAA...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTTCCTTTGGGGGTTTGTaGTGCTGTCATACGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETSFGGL*CCHTVP
Trigger: AGGAACCGTATGACAGCAGCACAAACCCCCAAAGGA...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCATGAGACTTCTAACTTaGTGGAAGATGCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSMRLLT*WKMPQE
Trigger: TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCAT...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGGTCATTAGATTCTCGTaGGTTAACAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTVIRFS*VNRDGK
Trigger: TTTCCCATCTCTGTTAACCCACGAGAATCTAATGAC...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGTTCTTTAAACAGGTGTaGTGGTTCCAAGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMFFKQV*WFQESG
Trigger: CCCACTCTCTTGGAACCACCACACCTGTTTAAAGAA...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAACCATCAGCTGCAGCATaGACAACCAGACCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSLGMWRQVFCKGELDKEPSAAA*TTRPSV
Trigger: CACGCTGGGTCTGGTTGTCCATGCTGCAGCTGATGG...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGCGGCAGAGAAAAGCATaGCCACTCCCGTGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLRQRKA*PLPWRS
Trigger: TGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCCCTATGAGATTAGTATaGCTATTTCTGTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSPMRLV*LFLSAD
Trigger: GTCAGCAGACAGAAATAGCCATACTAATCTCATAGG...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTTCCAACAGTGCACTTTaGGTGATGTGGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVSNSAL*VMWTIL
Trigger: CAGAATGGTCCACATCACCCAAAGTGCACTGTTGGA...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTAAGCTGTGTGTGGTCGTaGCTGTGCTCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVSCVWS*LCSCSW
Trigger: CCATGAACATGAGCACAGCCACGACCACACACAGCT...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
3UTR CAA 72 bp TGGACAACCAGACCCAGCGTGGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCTGGATCGTCAGTAGAA +
Preference number: 4 (lower is better)
Translates to: WTTRPSVVVILE*LDLAASGSSVE
Trigger: TTCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCACCACGCTGGGTCTGGTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAAGCGGCGGCGGGTAAGTaGCTCAAGCGAACCTGTTCG +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEAAAGK*LKRTCS
Trigger: CGAACAGGTTCGCTTGAGTCACTTACCCGCCGCCGC...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCCTTCGATTGTCGGATTaGGGGTGGCACAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCLRLSD*GWHNVL
Trigger: TAAGACATTGTGCCACCCTCAATCCGACAATCGAAG...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCTTCGATTGTCGGATTaGGGGTGGCACAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLLRLSD*GWHNVL
Trigger: TAAGACATTGTGCCACCCTCAATCCGACAATCGAAG...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGCTTCAGTCGTTCCTCTaGGAAATTAACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVLQSFL*EINSQG
Trigger: CCCTTGGCTGTTAATTTCTCAGAGGAACGACTGAAG...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GGACATAACTGGTGCTGCCAATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCTCTCCTGCTCCATTTaGTGGAATGGCAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GHNWCCQCKDQQVLSDSILSCSI*WNGRLD
Trigger: ATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAG...AATCGAATCAGAAAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLTVHFG*CGPFCI
Trigger: AATACAGAATGGTCCACATCACCCAAAGTGCACTGT...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTATTCCTTCAGGCCTCCTaGGGTGAATCTAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVFLQAS*GESRCL
Trigger: GAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAA...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGGCCACTGGGTTAGGCTaGGTATATCTAGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVATGLG*VYLENS
Trigger: GGAATTCTCTAGATATACTCAGCCTAACCCAGTGGC...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCGCCACTGGGTTAGGCTaGGTATATCTAGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLATGLG*VYLENS
Trigger: GGAATTCTCTAGATATACTCAGCCTAACCCAGTGGC...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCATTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSFRHDD*QSSSTE
Trigger: CTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAA...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp CTTAACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGTTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LNTAAVLDESGHDSQSPKFRHDD*QSSSTE
Trigger: CTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAA...CTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGGGAGGACATGTACTGTGGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATTTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: REDMYCGNIKKCPGREKHFRHDD*QSSSTE
Trigger: CTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAA...ATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATGTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp CGGCAGAGAAAAGCATGGCCACTCCCGTGGCGTTCACCTCTGAAAGGGCTTCTTAGGCATGCTAGCTTATaGGTCATAGAAAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: RQRKAWPLPWRSPLKGLLRHASL*VIENVF
Trigger: AAAAACGTTTTCTATGACGCATAAGCTAGCATGCCT...AAGAAGCCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGCTTTTCTCTGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp AATCCTTGCCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACTTTTCCTCTCCTGGAATACTaGCCACCATGCCAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: NPCRSSRLHPARYTSQTFPLLEY*PPCQQA
Trigger: AGCTTGCTGGCATGGTGGGCAGTATTCCAGGAGAGG...AAAAGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: RNILWGFVLLSYGSCVQSEGRFL*RTTTED
Trigger: ATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTC...GGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSEGRFL*RTTTED
Trigger: ATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTC...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCATTGCTAGACCTTGCTaGTTCTGGATCGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RNILWGFVLLSYGSCVQSIARPC*FWIVSR
Trigger: TCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAAT...GGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCTTCTGCCTTTGGCATaGAGACCTTCTGACTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDLLPLA*RPSDCL
Trigger: TAGGCAGTCAGAAGGTCTGCATGCCAAAGGCAGAAG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGTCATTAGATTCTCGTaGGTTAACAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTVIRFS*VNRDGK
Trigger: TTTCCCATCTCTGTTAACCCACGAGAATCTAATGAC...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCGTGGTTCCAAGAGAGTaGGCTTTCCAGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCVVPRE*AFQFFR
Trigger: CCTAAAGAACTGGAAAGCCCACTCTCTTGGAACCAC...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGTGGTTCCAAGAGAGTaGGCTTTCCAGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETVVPRE*AFQFFR
Trigger: CCTAAAGAACTGGAAAGCCCACTCTCTTGGAACCAC...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCATTTAAACAGGTGTGGTaGTTCCAAGAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSFKQVW*FQESGL
Trigger: AAGCCCACTCTCTTGGAACCACCACACCTGTTTAAA...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GPTRQEHPLGVCAAVIRFSSGFK*CLGSLN
Trigger: GTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGA...GAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGCATGGCCACTCCCGTaGCGTTCACCTCTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNAWPLP*RSPLKG
Trigger: CCCTTTCAGAGGTGAACGCCACGGGAGTGGCCATGC...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATGTGGCATCGGGCTTGTaGCTGTGCCCTATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYVASGL*LCPIPP
Trigger: GGGCGGAATAGGGCACAGCCACAAGCCCGATGCCAC...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCGCCGGCTGTTCTCACTaGATGGCAAACGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLAGCSH*MANGPG
Trigger: TCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGC...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLLHLME*QAGFRE
Trigger: CTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAG...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GTSFGGLCCCHTVPVFSPNTLRC*CVLLVL
Trigger: TAGAACTAAGAGGACACACCAGCATCGGAGTGTATT...GGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGACACTGCAGCAGTTCTaGATGAATCTGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMTLQQF*MNLVMI
Trigger: AATCATGACCAGATTCATCCAGAACTGCTGCAGTGT...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTTCCAACAGTGCACTTTaGGTGATGTGGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGSNSAL*VMWTIL
Trigger: CAGAATGGTCCACATCACCCAAAGTGCACTGTTGGA...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSWELPI*STSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCA...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CAA 72 bp GGGGAAGGCAAATTTGGAAGTCAGATGGTTCAATCCTaGCCGGAGTTCAAGGCTCCATCCAGCAAGATATAC +
Preference number: 4 (lower is better)
Translates to: GEGKFGSQMVQS*PEFKAPSSKIY
Trigger: GTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTGACTTCCAAATTTGCCTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGCTCTCCTGCTCCATTTaGTGGAATGGCAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLLSCSI*WNGRLD
Trigger: ATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAG...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGCTACAGGTGGTTATGTaGGAAGACACAGTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVLQVVM*EDTVSP
Trigger: TGGCGACACTGTGTCTTCTCACATAACCACCTGTAG...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGAACACTTCTCATTTATaGTCCATCTTGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMNTSHL*SILLQV
Trigger: CACCTGTAGCAAGATGGATCATAAATGAGAAGTGTT...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCACAGCTGCTGATCCAGTaGCAAATTCATGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSQLLIQ*QIHEGN
Trigger: ATTTCCTTCATGAATTTGTCACTGGATCAGCAGCTG...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGTVHFG*CGPFCI
Trigger: AATACAGAATGGTCCACATCACCCAAAGTGCACTGT...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACACGCCGATACTACAGCTaGCATGGCCGCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTRRYYS*HGRQVA
Trigger: TGCCACTTGGCGGCCATGGCAGCTGTAGTATCGGCG...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR GCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGACGCCGATACTACAGCTaGCATGGCCGCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRRRYYS*HGRQVA
Trigger: TGCCACTTGGCGGCCATGGCAGCTGTAGTATCGGCG...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR GCA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCTGGGTTCTCAGATaGCAGTCATTAGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGLWVLR*QSLDSR
Trigger: ACGAGAATCTAATGACTGGCATCTGAGAACCCAGAG...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTCTCTGGGTTCTCAGATaGCAGTCATTAGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETLWVLR*QSLDSR
Trigger: ACGAGAATCTAATGACTGGCATCTGAGAACCCAGAG...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGTTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWFRHDD*QSSSTE
Trigger: CTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAA...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTAGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVAKTSK*FLIRFR
Trigger: GCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGC...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGAGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: FLCSVPSYHVFQGLNTLRGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...TCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCACCCAGAACCAGGGCTaGCACTTCCAGGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGITQNQG*HFQAAE
Trigger: CTCAGCCGCCTGGAAGTGGCAGCCCTGGTTCTGGGT...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGTGCTTGGTTCCCTGCTaGCTGAAGATGCATTTGAGC +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVCLVPC*LKMHLS
Trigger: GCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCA...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGGAATACTGCCCACCATaGCAGCAAGCTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWEYCPP*QQALPP
Trigger: TGGAGGAAGAGCTTGCTGGCATGGTGGGCAGTATTC...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGGTGTGGTCGTGGCTGTaGTCATGTTCATGGACAACT +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVVWSWL*SCSWTT
Trigger: AGTTGTCCATGAACATGAGCACAGCCACGACCACAC...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGGAATTGCTAGACCTTaGTGCTTCTGGATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSGIARP*CFWIVS
Trigger: ACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATACTCTCCTCCGAGCCTaGGATGAGGAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYTLLRA*DEERSP
Trigger: AGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGT...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTAGTGGTTCCAAGAGAGTaGGCTTTCCAGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVVVPRE*AFQFFR
Trigger: CCTAAAGAACTGGAAAGCCCACTCTCTTGGAACCAC...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp TTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGACACCATGGACATAACTaGTGCTGCCAATGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLCSVPSYHVFQGLNTLRHHGHN*CCQCKD
Trigger: GTCTTTGCATTGGCAGCACCAGTTATGTCCATGGTG...TCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTACACCATGGACATAACTaGTGCTGCCAATGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVHHGHN*CCQCKD
Trigger: GTCTTTGCATTGGCAGCACCAGTTATGTCCATGGTG...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTCCATCTTGCTACAGGTaGTTATGTGAGAAGACACAG +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGPSCYR*LCEKTQ
Trigger: CTGTGTCTTCTCACATAACCACCTGTAGCAAGATGG...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCTAGCTACCATGTTACACATGAGGAGGTaGTATTTTAAGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: WGFVLLSYGSCVQSLATMLHMRR*YFKGST
Trigger: TGTTGAGCCCTTAAAATACCACCTCCTCATGTGTAA...CATGGTAGCTAGGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCSVECT*ELPIWS
Trigger: GGACCAGATTGGTAACTCCCATGTGCATTCTACTGA...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGTGTGTTTCACTTGCTTaGTGGTGTTTTCTTTACTGT +
Preference number: 4 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTCVSLA*WCFLYC
Trigger: ACAGTAAAGAAAACACCACCAAGCAAGTGAAACACA...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAACTTCGATTGTCGGATTaGGGGTGGCACAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: WTLGIHVEMRKVRQETEELRLSD*GWHNVL
Trigger: TAAGACATTGTGCCACCCTCAATCCGACAATCGAAG...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAAGAGGCACCTTCCTCTTaGACGTACCCGGCAACAGAC +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEEAPSS*TYPATD
Trigger: GTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTC...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATCTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYLLQAR*LPEQFH
Trigger: GTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAG...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAACGTGGCGTTCACCTCTaGAAGGGCTTCTTTACTGCT +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDERGVHL*KGFFTA
Trigger: AGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACG...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp AGGGAGGACATGTACTGTGGCAACATAAAGAAATGTCCCGGCAGAGAAAAGCATCCTTTAGCATCTAAGTaGGTGGGTGCTATGACCTTC +
Preference number: 4 (lower is better)
Translates to: REDMYCGNIKKCPGREKHPLASK*VGAMTF
Trigger: GAAGGTCATAGCACCCACTCACTTAGATGCTAAAGG...ATGCTTTTCTCTGCCGGGACATTTCTTTATGTTGCCACAGTACATGTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCAACACTTCTCATTTATaGTCCATCTTGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGNTSHL*SILLQV
Trigger: CACCTGTAGCAAGATGGATCATAAATGAGAAGTGTT...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTTGCAATTGTTGCCAATaGCTACATACAACTGTATCC +
Preference number: 4 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVCNCCQ*LHTTVS
Trigger: GGATACAGTTGTATGTAGTCATTGGCAACAATTGCA...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAACATCACTGCTTTCTTaGAATGGAACTGACAAGCAA +
Preference number: 4 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSTSLLS*NGTDKQ
Trigger: TTGCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGT...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCCCATGCACTGTTCCAGCTATTaGACCAGGGGAACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: FKITVPAIEPGELQSYPMHCSSY*TRGTAV
Trigger: GACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTG...CATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTCTGCCCTATACCCGGTaGTGCCCATGGTACTGCACT +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLLPYTR*CPWYCT
Trigger: AGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAG...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATCTGCCCTATACCCGGTaGTGCCCATGGTACTGCACT +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYLPYTR*CPWYCT
Trigger: AGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAG...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGACTCTGGGTTCTCAGATaGCAGTCATTAGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: FLCSVPSYHVFQGLNTLRLWVLR*QSLDSR
Trigger: ACGAGAATCTAATGACTGGCATCTGAGAACCCAGAG...TCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGACATAACTGGTGCTGCCAATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: GHNWCCQCKDQQVLSDSIGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...AATCGAATCAGAAAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCTCGGGCTTGTGGCTGTaGCCTATTCCGCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGISGLWL*PIPPTS
Trigger: TGAGGTGGGCGGAATAGGGCACAGCCACAAGCCCGA...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR GCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTAACTACTACGTCCACTaGCCTGAAGAAACTAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGNYYVH*PEETSL
Trigger: AAGACTAGTTTCTTCAGGGCAGTGGACGTAGTAGTT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAAGGCCTGTGCCACGCTaGTTGGTTCCCTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIERPVPR*LVPCCL
Trigger: CAGGCAGCAGGGAACCAAGCAGCGTGGCACAGGCCT...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAATGAGACTTCTAACTTaGTGGAAGATGCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSMRLLT*WKMPQE
Trigger: TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCAT...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAGGAATTGCTAGACCTTaGTGCTTCTGGATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSGIARP*CFWIVS
Trigger: ACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCC...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGAT +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSDGKSQ*GKCAND
Trigger: ATCATTCGCACATTTTCCCCATTGACTTTTCCCATC...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACTTCTTTAAACAGGTGTaGTGGTTCCAAGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDFFKQV*WFQESG
Trigger: CCCACTCTCTTGGAACCACCACACCTGTTTAAAGAA...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GTTACCAATCTGGTCCACCAGCAACATGAAAACGAAGCCCAGAACGAGGGAAACGGAGGACATGTACTGTaGCAACATAAAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: VTNLVHQQHENEAQNEGNGGHVL*QHKEMS
Trigger: GGACATTTCTTTATGTTGCCACAGTACATGTCCTCC...GTTTCCCTCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGACCTCACCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVTSPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGT...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGATGGAATGGCAGGCTaGATTCAGAGAGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNDGMAG*IQRGTC
Trigger: GCACGTGCCTCTCTGAATCCAGCCTGCCATTCCATC...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCACCTATGAGATTAGTATaGCTATTTCTGTCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSPMRLV*LFLSAD
Trigger: GTCAGCAGACAGAAATAGCCATACTAATCTCATAGG...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGGGACATGGCCTCTCCTaGAATACTGCCCACCATGCC +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWGHGLS*NTAHHA
Trigger: GGCATGGTGGGCAGTATTCCAGGAGAGGCCATGTCC...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCNTLRC*CVLLVL
Trigger: TAGAACTAAGAGGACACACCAGCATCGGAGTGTATT...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGACACTGCAGCAGTTCTaGATGAATCTGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVTLQQF*MNLVMI
Trigger: AATCATGACCAGATTCATCCAGAACTGCTGCAGTGT...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAGCATGCAGCTGTGTGTaGTCGTGGCTGTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLACSCV*SWLCSC
Trigger: ACATGAGCACAGCCACGACCACACACAGCTGCATGC...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAATGCATGCAGCTGTGTGTaGTCGTGGCTGTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: CRTTTEDFHLTLQQFWMNACSCV*SWLCSC
Trigger: ACATGAGCACAGCCACGACCACACACAGCTGCATGC...ATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGGGAAAATGTGCGAATaGTCGATTTCTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDGKMCE*SISSIV
Trigger: GACAATCGAAGAAATCGATCATTCGCACATTTTCCC...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACCAGCTGCTGATCCAGTaGCAAATTCATGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDQLLIQ*QIHEGN
Trigger: ATTTCCTTCATGAATTTGTCACTGGATCAGCAGCTG...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp GAAAACGGAACTGAAATGTGCCAAGAAGTGAACACGGACATGGCCTCTCCTGGATTCTGCTGCTTTGTCTaGTGCAATCACATTATGTGT +
Preference number: 4 (lower is better)
Translates to: ENGTEMCQEVNTDMASPGFCCFV*CNHIMC
Trigger: ACACATAATGTGATTGCATCAGACAAAGCAGCAGAA...TCCAGGAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336643.10
CDS-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTTTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETFRHDD*QSSSTE
Trigger: CTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAA...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDIQRGT*QRSCLN
Trigger: ATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAAT...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp CTTGCTACAGGTGGTTATGTGAGAAGACACAGTGTCGCCAAAGCTGACCTAGTATGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAG +
Preference number: 4 (lower is better)
Translates to: LATGGYVRRHSVAKADLVWRQVF*KGELDK
Trigger: CTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCA...TACTAGGTCAGCTTTGGCGACACTGTGTCTTCTCACATAACCACCTGTAGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TATAGGCATGCAGCTGTGTGTGGTCGTGGCTGTGCTCATGTTCATGGACAACTGATTTATGATCCATCTTaGTACAGGTGGTTATGTGAG +
Preference number: 4 (lower is better)
Translates to: YRHAAVCGRGCAHVHGQLIYDPS*YRWLCE
Trigger: CTCACATAACCACCTGTAGCAAGATGGATCATAAAT...CAGTTGTCCATGAACATGAGCACAGCCACGACCACACACAGCTGCATGCCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTAACCTGGAACATCACTaGTTTCTTGAAATGGAACTG +
Preference number: 4 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETNLEHH*FLEMEL
Trigger: CAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTT...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATTTTGGGGGTTTGTGCTaGTGTCATACGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYFGGLC*CHTVPV
Trigger: CACAGGAACCGTATGACAGCAGCACAAACCCCCAAA...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGACCAGGAGAGAAATGAGTAGTTCTCGAGGCAGCAGCTTTAAAATCTGGGAAGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LTRREMSSSRGSSFKIWEEGRFL*RTTTED
Trigger: ATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTC...TTCCCAGATTTTAAAGCTGCTGCCTCGAGAACTACTCATTTCTCTCCTGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTATTATGTGTTTCACTTaGTTGGTGGTGTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGIMCFT*LVVFSL
Trigger: GAGGGAAAACACCACCAAGCAAGTGAAACACATAAT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATGTGTGGTCGTGGCTGTaGTCATGTTCATGGACAACT +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYVWSWL*SCSWTT
Trigger: AGTTGTCCATGAACATGAGCACAGCCACGACCACAC...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAATTGCTAGACCTTGCTaGTTCTGGATCGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSIARPC*FWIVSR
Trigger: TCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAAT...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGGGAATTGCTAGACCTTaGTGCTTCTGGATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLGIARP*CFWIVS
Trigger: ACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCC...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCATGCAGACCTTCTGACTaGCTATTATTCTCAACACCC +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSCRPSD*LLFSTP
Trigger: GGGTGTTGAGAATAATAGGCAGTCAGAAGGTCTGCA...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCGTCATTAGATTCTCGTaGGTTAACAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCVIRFS*VNRDGK
Trigger: TTTCCCATCTCTGTTAACCCACGAGAATCTAATGAC...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp ACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: TAAVLDESGHDSQSPKGLSSGFK*CLGSLN
Trigger: GTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGA...GAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGCACCATGGACATAACTaGTGCTGCCAATGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWHHGHN*CCQCKD
Trigger: GTCTTTGCATTGGCAGCACCAGTTATGTCCATGGTG...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CACAAGTTACACATTTCCTTCAGGCCTCCTGAGGTGAATCTAGATGTCTCAGGTCCATCTTGCTACAGGTaGTTATGTGAGAAGACACAG +
Preference number: 4 (lower is better)
Translates to: HKLHISFRPPEVNLDVSGPSCYR*LCEKTQ
Trigger: CTGTGTCTTCTCACATAACCACCTGTAGCAAGATGG...ACCTGAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAAATGTGTAACTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGCCATCTTGCTACAGGTaGTTATGTGAGAAGACACAG +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVPSCYR*LCEKTQ
Trigger: CTGTGTCTTCTCACATAACCACCTGTAGCAAGATGG...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCGTAAGCAGCAAATTGTaGCGAGGAGAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLVSSKL*RGEARG
Trigger: CCCTCTAGCCTCTCCTCGCCACAATTTGCTGCTTAC...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATACACTGCAGCAGTTCTaGATGAATCTGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDTLQQF*MNLVMI
Trigger: AATCATGACCAGATTCATCCAGAACTGCTGCAGTGT...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATGCATGCAGCTGTGTGTaGTCGTGGCTGTGCTCATGT +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYACSCV*SWLCSC
Trigger: ACATGAGCACAGCCACGACCACACACAGCTGCATGC...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGGGGAAAATGTGCGAATaGTCGATTTCTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVGKMCE*SISSIV
Trigger: GACAATCGAAGAAATCGATCATTCGCACATTTTCCC...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR TCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGCCAGCAAGTGCTTTCTaGTTCGATTCCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEPASAF*FDSALS
Trigger: GCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGG...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCAGCGTGGCGTTCACCTCTaGAAGGGCTTCTTTACTGCT +
Preference number: 4 (lower is better)
Translates to: QNYKAAIHGMISCLQGIQRGVHL*KGFFTA
Trigger: AGCAGTAAAGAAGCCCTTTCAGAGGTGAACGCCACG...CTGGATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR TCA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCAGTGTCAATTTACACATaGGGAGGTGGTATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSVSIYT*GGGILR
Trigger: CCTTAAAATACCACCTCCTCATGTGTAAATTGACAC...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATTGCAATTGTTGCCAATaGCTACATACAACTGTATCC +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDCNCCQ*LHTTVS
Trigger: GGATACAGTTGTATGTAGTCATTGGCAACAATTGCA...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CTGACCAGGAGAGAAATGAGTAGTTCTCGAGGCAGCAGCTTTAAAATCTGGGAACTCACTTGGCTGTTTTaGATTGGGAAAGAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTRREMSSSRGSSFKIWELTWLF*IGKERG
Trigger: ACCTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAG...TTCCCAGATTTTAAAGCTGCTGCCTCGAGAACTACTCATTTCTCTCCTGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGACACTGTTCCAGCTATTaGACCAGGGGAACTGCAGTC +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRHCSSY*TRGTAV
Trigger: GACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTG...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAAGCAAAGACCAGCAAGTaGTTTCTGATTCGATTCCGC +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDEAKTSK*FLIRFR
Trigger: GCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGC...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATAACTGGTGCTGCCAATaGAAAGACCAGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYNWCCQ*KDQQVL
Trigger: AAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTT...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAAGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDEGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAATTGCTTGGTTCCCTGCTaGCTGAAGATGCATTTGAGC +
Preference number: 4 (lower is better)
Translates to: CRTTTEDFHLTLQQFWMNCLVPC*LKMHLS
Trigger: GCTCAAATGCATCTTCAGGCAGCAGGGAACCAAGCA...ATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAATTTGGCAATAGTGTaGACAGGAAAACTGAATCAA +
Preference number: 4 (lower is better)
Translates to: KAGTSFGGLCCCHTVPVFNLAIV*TGKLNQ
Trigger: TTGATTCAGTTTTCCTGTGCACACTATTGCCAAATT...GAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTATCCTTTGGGGGTTTGTaGTGCTGTCATACGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLSFGGL*CCHTVP
Trigger: AGGAACCGTATGACAGCAGCACAAACCCCCAAAGGA...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTACAGCATCTCCAACAGTaGACTTTGGGTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLQHLQQ*TLGDVD
Trigger: GTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTATACTACAGCTGCCATaGCCGCCAAGTGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLILQLP*PPSGIS
Trigger: AGAGATGCCACTTGGCGGCCATGGCAGCTGTAGTAT...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR CCA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGGAGGACATGTACTGTaGCAACATAAAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: WTLGIHVEMRKVRQETEEGGHVL*QHKEMS
Trigger: GGACATTTCTTTATGTTGCCACAGTACATGTCCTCC...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGCTGTTCTCACTGGATaGCAAACGGCCCTGGACCAA +
Preference number: 4 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFAVLTG*QTALDQ
Trigger: TTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGC...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAACTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKLHLME*QAGFRE
Trigger: CTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAG...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAAGTAAGCAGCAAATTGTaGCGAGGAGAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEVSSKL*RGEARG
Trigger: CCCTCTAGCCTCTCCTCGCCACAATTTGCTGCTTAC...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp AATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCCGCTCTAAGCCAGCATGCTTACACATGAGGAGGTaGTATTTTAAGGGCTCAACA +
Preference number: 4 (lower is better)
Translates to: NAKTSKCFLIRFRSKPACLHMRR*YFKGST
Trigger: TGTTGAGCCCTTAAAATACCACCTCCTCATGTGTAA...GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGACCAGGAGAGAAATGAGTAGTTCTCGAGGCAGCAGCTTTAAAATCTGGGAAAATTTGGAAGTCAGATaGTTCAATCCTTGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: LTRREMSSSRGSSFKIWENLEVR*FNPCRS
Trigger: ACTCCGGCAAGGATTGAACCATCTGACTTCCAAATT...TTCCCAGATTTTAAAGCTGCTGCCTCGAGAACTACTCATTTCTCTCCTGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAGCAGCTTTAAAATCTaGGAAAGCCCATACATAGCT +
Preference number: 4 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDSSFKI*ESPYIA
Trigger: AGCTATGTATGGGCTTTCCCAGATTTTAAAGCTGCT...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCCCATGTCCAACAGTGCACTTTaGGTGATGTGGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: FKITVPAIEPGELQSYPMSNSAL*VMWTIL
Trigger: CAGAATGGTCCACATCACCCAAAGTGCACTGTTGGA...CATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGAGTTCAGCAGCAAAGTTaGCACAAAGCTGTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRVQQQS*HKAVSA
Trigger: GGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAAC...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATCTTCAGTCGTTCCTCTaGGAAATTAACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNLQSFL*EINSQG
Trigger: CCCTTGGCTGTTAATTTCTCAGAGGAACGACTGAAG...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATAGTGAGTGGGTGCTATaGCCTTCCATCAACGCATGT +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYSEWVL*PSINAC
Trigger: ACATGCGTTGATGGAAGGTCATAGCACCCACTCACT...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGCTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVLQRRT*QGMLQN
Trigger: ATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAG...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CTTAACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGCTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: LNTAAVLDESGHDSQSPKLQRRT*QGMLQN
Trigger: ATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAG...CTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAAGACACTTTGTGATCTaGCTGTTCTTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SSLGMWRQVFCKGELDKERHFVI*LFLKES
Trigger: GCTTTCCTTCAAGAACAGTCAGATCACAAAGTGTCT...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAAACACTTCTCATTTATaGTCCATCTTGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: WTLGIHVEMRKVRQETEENTSHL*SILLQV
Trigger: CACCTGTAGCAAGATGGATCATAAATGAGAAGTGTT...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAAATGTGCCAAGAAGTaGACACGGACATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWKCAKK*TRTWPL
Trigger: GAGAGGCCATGTCCGTGTTCACTTCTTGGCACATTT...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDSGFKW*LGSLNR
Trigger: CCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACT...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGAAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: QHLQQCTLGDVDHSVLSRSGFKW*LGSLNR
Trigger: CCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACT...TCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCCGCTCTAAGCCAGCATGCAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: NAKTSKCFLIRFRSKPACSGFKW*LGSLNR
Trigger: CCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACT...GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTAGATGGTTCAATCCTTaGCGGAGTTCAAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETRWFNP*RSSRLH
Trigger: ATGGAGCCTTGAACTCCGGCAAGGATTGAACCATCT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWLNTLR*WCVLLV
Trigger: AACTAAGAGGACACACCAGCATCGGAGTGTATTAAG...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTTCCTTTGGGGGTTTGTaGTGCTGTCATACGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLSFGGL*CCHTVP
Trigger: AGGAACCGTATGACAGCAGCACAAACCCCCAAAGGA...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACCAGCATCTCCAACAGTaGACTTTGGGTGATGTGGAC +
Preference number: 4 (lower is better)
Translates to: FCIEQKFSNGRKVPLQNNQHLQQ*TLGDVD
Trigger: GTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG...GTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGGATCGTCAGTAGAATaGACATGGGAGTTACCAATC +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKGSSVE*TWELPI
Trigger: GATTGGTAACTCCCATGTGCATTCTACTGACGATCC...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTACACCATGGACATAACTaGTGCTGCCAATGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLHHGHN*CCQCKD
Trigger: GTCTTTGCATTGGCAGCACCAGTTATGTCCATGGTG...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTATCAAGGAAGTCATTTaGACTTTCCATACTATACCT +
Preference number: 4 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGIKEVI*TFHTIP
Trigger: AGGTATAGTATGGAAAGTCCAAATGACTTCCTTGAT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCGGCAGGAACATCCTTTaGGGGTTTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGIGRNIL*GFVLLS
Trigger: TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGGTTTCACTTGCTTGGTaGTGTTTTCCCTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVVSLAW*CFPSRI
Trigger: TATTCTTGAGGGAAAACACCACCAAGCAAGTGAAAC...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCAGCTGTGTGTGGTCGTaGCTGTGCTCATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGISCVWS*LCSCSW
Trigger: CCATGAACATGAGCACAGCCACGACCACACACAGCT...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGTCTAATCCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWSNPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGATTAGA...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555840.5
3UTR CAA 72 bp TTTAAGCATGATGGCAAGGCACTGCTGAAAGAGGCTTaGGCCAGTAGAACAAATTACCATTGCACACAACAA +
Preference number: 4 (lower is better)
Translates to: FKHDGKALLKEA*ASRTNYHCTQQ
Trigger: TTGTTGTGTGCAATGGTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAGTGCCTTGCCATCATGCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
3UTR CAA 72 bp CAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: QQCTLGDVDHSV*SRNFLMEGRFL
Trigger: GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACACTTCGATTGTCGGATTaGGGGTGGCACAATGTCTTA +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTLRLSD*GWHNVL
Trigger: TAAGACATTGTGCCACCCTCAATCCGACAATCGAAG...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGCTTCAGTCGTTCCTCTaGGAAATTAACAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWLQSFL*EINSQG
Trigger: CCCTTGGCTGTTAATTTCTCAGAGGAACGACTGAAG...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCAGTGAGTGGGTGCTATaGCCTTCCATCAACGCATGT +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGISEWVL*PSINAC
Trigger: ACATGCGTTGATGGAAGGTCATAGCACCCACTCACT...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACCCTTTAGCATCTAAGTaGGTGGGTGCTATGACCTTC +
Preference number: 4 (lower is better)
Translates to: FCIEQKFSNGRKVPLQNNPLASK*VGAMTF
Trigger: GAAGGTCATAGCACCCACTCACTTAGATGCTAAAGG...GTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAAGAGGAAAACGGAACTaGAATGTGCCAAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKRGKRN*NVPRSE
Trigger: TTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCT...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCAGAGCACTTGGAATCTaGAGAAAGTCTATCCCTACC +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLRALGI*RKSIPT
Trigger: GGTAGGGATAGACTTTCTTCAGATTCCAAGTGCTCT...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLTVHFG*CGPFCI
Trigger: AATACAGAATGGTCCACATCACCCAAAGTGCACTGT...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTGCCACTGGGTTAGGCTaGGTATATCTAGAGAATTCC +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLATGLG*VYLENS
Trigger: GGAATTCTCTAGATATACTCAGCCTAACCCAGTGGC...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGCTCTGGGTTCTCAGATaGCAGTCATTAGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: FKIPEQGSLGCFELGKKELWVLR*QSLDSR
Trigger: ACGAGAATCTAATGACTGGCATCTGAGAACCCAGAG...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGG +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVSGFKW*LGSLNR
Trigger: CCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACT...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR GCA 90 bp TTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACGGAATTGCTAGACCTTaGTGCTTCTGGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: FCIEQKFSNGRKVPLQNNGIARP*CFWILK
Trigger: CTTGAGGATCCAGAAGCAGCAAGGTCTAGCAATTCC...GTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000031146.8
CDS-3UTR GCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAAACTGGTGCTGCCAATaGAAAGACCAGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTNWCCQ*KDQQVL
Trigger: AAGCACTTGCTGGTCTTTGCATTGGCAGCACCAGTT...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AAAACTGAATCAAACCTGGAACATCACTGCTTTCTTGAAATGGAACTGACAAGCGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: KTESNLEHHCFLEMELTSGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...GCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACGGACATAACTGGTGCTaGCAATGCAAAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: FCIEQKFSNGRKVPLQNNGHNWC*QCKDQQ
Trigger: TTGCTGGTCTTTGCATTGGCAGCACCAGTTATGTCC...GTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAACATGGACATAACTGGTaGTGCCAATGCAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEHGHNW*CQCKDQ
Trigger: CTGGTCTTTGCATTGGCAGCACCAGTTATGTCCATG...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCCCATGAACTACTACGTCCACTaGCCTGAAGAAACTAGTCTT +
Preference number: 4 (lower is better)
Translates to: FKITVPAIEPGELQSYPMNYYVH*PEETSL
Trigger: AAGACTAGTTTCTTCAGGGCAGTGGACGTAGTAGTT...CATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAAACTACTACGTCCACTaGCCTGAAGAAACTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKNYYVH*PEETSL
Trigger: AAGACTAGTTTCTTCAGGGCAGTGGACGTAGTAGTT...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTAACGGAACTGAAATGTaGCAAGAAGTGAACACGGAC +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETNGTEM*QEVNTD
Trigger: GTCCGTGTTCACTTCTTGGCACATTTCAGTTCCGTT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCTTTGGGGGTTTGTGCTaGTGTCATACGGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGIFGGLC*CHTVPV
Trigger: CACAGGAACCGTATGACAGCAGCACAAACCCCCAAA...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCGTGTGGTCGTGGCTGTaGTCATGTTCATGGACAACT +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGIVWSWL*SCSWTT
Trigger: AGTTGTCCATGAACATGAGCACAGCCACGACCACAC...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAATATTGCTAGACCTTGCTaGTTCTGGATCGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: CRTTTEDFHLTLQQFWMNIARPC*FWIVSR
Trigger: TCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAAT...ATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTGGAATTGCTAGACCTTaGTGCTTCTGGATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLGIARP*CFWIVS
Trigger: ACTGACGATCCAGAAGCAGCAAGGTCTAGCAATTCC...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTTTCCCAAATGTCTTCTaGCTTTGGCATGCAGACCTT +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETFPNVF*LWHADL
Trigger: AAGGTCTGCATGCCAAAGGCAGAAGACATTTGGGAA...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTATTTAAACAGGTGTGGTaGTTCCAAGAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLFKQVW*FQESGL
Trigger: AAGCCCACTCTCTTGGAACCACCACACCTGTTTAAA...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATTTTAAACAGGTGTGGTaGTTCCAAGAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNFKQVW*FQESGL
Trigger: AAGCCCACTCTCTTGGAACCACCACACCTGTTTAAA...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCAGACCTCACCTCCCCTCTaGACTCTAGGAATACATGTA +
Preference number: 4 (lower is better)
Translates to: QNYKAAIHGMISCLQGIQTSPPL*TLGIHV
Trigger: TACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGT...CTGGATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATCTCCATTTGATGGAATaGCAGGCTGGATTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYLHLME*QAGFRE
Trigger: CTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAG...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAAAGGGGAAGGCAAATTTaGAAGTCAGATGGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDERGRQI*KSDGSI
Trigger: GATTGAACCATCTGACTTCCAAATTTGCCTTCCCCT...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GAACTGCAGTCTTATCCCATGAGACTTCTAACTTGCTGGAAGATGCCACAAGAAAGCAGCTTTAAAATCTaGGAAAGCCCATACATAGCT +
Preference number: 4 (lower is better)
Translates to: ELQSYPMRLLTCWKMPQESSFKI*ESPYIA
Trigger: AGCTATGTATGGGCTTTCCCAGATTTTAAAGCTGCT...TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATGGGATAAGACTGCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKNTLRC*CVLLVL
Trigger: TAGAACTAAGAGGACACACCAGCATCGGAGTGTATT...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAGGCAGGAACATCCTTTaGGGGTTTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEGRNIL*GFVLLS
Trigger: TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAATCCAACAGTGCACTTTaGGTGATGTGGACCATTCTG +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKESNSAL*VMWTIL
Trigger: CAGAATGGTCCACATCACCCAAAGTGCACTGTTGGA...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCTTGTGTTAAGCCACTaGGTTAGGCTGAGTATATCT +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYLVLSH*VRLSIS
Trigger: AGATATACTCAGCCTAACCCAGTGGCTTAACACAAG...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATTGTGTTTCACTTGCTTaGTGGTGTTTTCCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GTFKITVPAIEPGELQSYCVSLA*WCFPSR
Trigger: TCTTGAGGGAAAACACCACCAAGCAAGTGAAACACA...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETSVECT*ELPIWS
Trigger: GGACCAGATTGGTAACTCCCATGTGCATTCTACTGA...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
3UTR CAA 72 bp GCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTaGGTAGCCAATAATTCCATCTGTAATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARIMLLIINCVS*VANNSICNHGS
Trigger: GCTGCCATGATTACAGATGGAATTATTGGCTACCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTGGGAAAATGTGCGAATaGTCGATTTCTTCGATTGTC +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETGKMCE*SISSIV
Trigger: GACAATCGAAGAAATCGATCATTCGCACATTTTCCC...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATAGACACTTTGTGATCTaGCTGTTCTTGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLVLSHWVRLSISREFLNRHFVI*LFLKES
Trigger: GCTTTCCTTCAAGAACAGTCAGATCACAAAGTGTCT...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGAACAGTGCACTTTGGGTaGTGTGGACCATTCTGTATT +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRTVHFG*CGPFCI
Trigger: AATACAGAATGGTCCACATCACCCAAAGTGCACTGT...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAATTCCTTCAGGCCTCCTaGGGTGAATCTAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEFLQAS*GESRCL
Trigger: GAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAA...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTATTGCTAGACCTTGCTaGTTCTGGATCCTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: CVIENVFTNYYVHCPEETIARPC*FWILKN
Trigger: ATTCTTGAGGATCCAGAAGCAGCAAGGTCTAGCAAT...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000031146.8
CDS-3UTR GCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGTGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAG +
Preference number: 4 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEWRQVF*KGELDK
Trigger: CTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCA...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGATTTATGATCCATCTTaGTACAGGTGGTTATGTGAG +
Preference number: 4 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLIYDPS*YRWLCE
Trigger: CTCACATAACCACCTGTAGCAAGATGGATCATAAAT...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAAATTTGGCAATAGTGTaGACAGGAAAACTGAATCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTSFISTAADPVTNSNLAIV*TGKLNQ
Trigger: TTGATTCAGTTTTCCTGTGCACACTATTGCCAAATT...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATGAAGGAAGGTTCCTCTaGAGAACAACTACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYEGRFL*RTTTED
Trigger: ATCCTCTGTAGTTGTTCTGCAGAGGAACCTTCCTTC...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGAGGATCGTCAGTAGAATaGACATGGGAGTTACCAATC +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRGSSVE*TWELPI
Trigger: GATTGGTAACTCCCATGTGCATTCTACTGACGATCC...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGTCATTAGATTCTCGTaGGTTAACAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKVIRFS*VNRDGK
Trigger: TTTCCCATCTCTGTTAACCCACGAGAATCTAATGAC...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp AAAACTGAATCAAACCTGGAACATCACTGCTTTCTTGAAATGGAACTGACAAGCTTTAAACAGGTGTGGTaGTTCCAAGAGAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KTESNLEHHCFLEMELTSFKQVW*FQESGL
Trigger: AAGCCCACTCTCTTGGAACCACCACACCTGTTTAAA...GCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp AATCCTTGCCGGAGTTCAAGGCTCCATCCAGCAAGATATACTAGCCAAACTTTTTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: NPCRSSRLHPARYTSQTFSSGFK*CLGSLN
Trigger: GTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGA...AAAAGTTTGGCTAGTATATCTTGCTGGATGGAGCCTTGAACTCCGGCAAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAAGTTTCACTTGCTTGGTaGTGTTTTCCCTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: LQNNYRGFSLNTAAVLDEVSLAW*CFPSRI
Trigger: TATTCTTGAGGGAAAACACCACCAAGCAAGTGAAAC...TTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTATGTGTTTCACTTGCTTaGTGGTGTTTTCCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLCVSLA*WCFPSR
Trigger: TCTTGAGGGAAAACACCACCAAGCAAGTGAAACACA...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGTGTTTCACTTGCTTaGTGGTGTTTTCCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLCVSLA*WCFPSR
Trigger: TCTTGAGGGAAAACACCACCAAGCAAGTGAAACACA...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEWELPI*STSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCA...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CCA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGGTTTCACTTGCTTGGTaGTGTTTTCTTTACTGTAAA +
Preference number: 4 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVVSLAW*CFLYCK
Trigger: TTTACAGTAAAGAAAACACCACCAAGCAAGTGAAAC...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR TCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGGTGTCAATTTACACATaGGGAGGTGGTATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEVSIYT*GGGILR
Trigger: CCTTAAAATACCACCTCCTCATGTGTAAATTGACAC...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCGTGTCAATTTACACATaGGGAGGTGGTATTTTAAGG +
Preference number: 4 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLVSIYT*GGGILR
Trigger: CCTTAAAATACCACCTCCTCATGTGTAAATTGACAC...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGAGCTAAGAGGGCCCTaGAAGGTTTGCTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFELRGP*KVCLLI
Trigger: TATTAACAAGCAAACCTTTCAGGGCCCTCTTAGCTC...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR TCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAGAGGAAAACGGAACTaGAATGTGCCAAGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWRGKRN*NVPRSE
Trigger: TTCACTTCTTGGCACATTTCAGTTCCGTTTTCCTCT...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGGTTGTCTAGTTCTTCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: HWVRLSISREFLNGCLVLLNTLR*WCVLLV
Trigger: AACTAAGAGGACACACCAGCATCGGAGTGTATTAAG...AAGAACTAGACAACCATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACACTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTLNTLR*WCVLLV
Trigger: AACTAAGAGGACACACCAGCATCGGAGTGTATTAAG...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAATTATGTGTTTCACTTaGTTGGTGGTGTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLIMCFT*LVVFSL
Trigger: GAGGGAAAACACCACCAAGCAAGTGAAACACATAAT...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGAT +
Preference number: 4 (lower is better)
Translates to: NLLVLSHWVRLSISREFLDGKSQ*GKCAND
Trigger: ATCATTCGCACATTTTCCCCATTGACTTTTCCCATC...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATCAAGGAAGTCATTTaGACTTTCCATACTATACCT +
Preference number: 4 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWIKEVI*TFHTIP
Trigger: AGGTATAGTATGGAAAGTCCAAATGACTTCCTTGAT...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACACTGCAGCAGTTCTaGATGAATCTGGTCATGATT +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTTLQQF*MNLVMI
Trigger: AATCATGACCAGATTCATCCAGAACTGCTGCAGTGT...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp TTCAAAATACCAGAACAGGGCTCACTTGGCTGTTTTGAATTGGGAAAGAAAGAGGTTTCACTTGCTTGGTaGTGTTTTCCCTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: FKIPEQGSLGCFELGKKEVSLAW*CFPSRI
Trigger: TATTCTTGAGGGAAAACACCACCAAGCAAGTGAAAC...CTCTTTCTTTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTGGTATTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336643.10
CDS-3UTR TCA 90 bp ACCAGTCAGCTGTTAACATCCAATCAAGGAAGTCATTTGGACTTTCCATACTATCTGCAAAGGAGAACTTaGCAAGGAATGCTACAAAAT +
Preference number: 4 (lower is better)
Translates to: TSQLLTSNQGSHLDFPYYLQRRT*QGMLQN
Trigger: ATTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAG...ATAGTATGGAAAGTCCAAATGACTTCCTTGATTGGATGTTAACAGCTGACTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR TCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAATGCAATTGTTGCCAATaGCTACATACAACTGTATCC +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKECNCCQ*LHTTVS
Trigger: GGATACAGTTGTATGTAGTCATTGGCAACAATTGCA...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR GCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAACTCTGGGTTCTCAGATaGCAGTCATTAGATTCTCGT +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIELWVLR*QSLDSR
Trigger: ACGAGAATCTAATGACTGGCATCTGAGAACCCAGAG...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR GCA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTAATTCAGAGAGGCACGTaGCAAAGGAGCTGTTTAAAT +
Preference number: 4 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLIQRGT*QRSCLN
Trigger: ATTTAAACAGCTCCTTTGGCACGTGCCTCTCTGAAT...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCTGGAGACAGGTATTCTaGAAAGGAGAACTTGACAAG +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGIWRQVF*KGELDK
Trigger: CTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCA...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAACCTGGAACATCACTaGTTTCTTGAAATGGAACTG +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWNLEHH*FLEMEL
Trigger: CAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTT...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAAGAAATGAGACTTCTAACTTaGTGGAAGATGCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: LNKAAFDTKVISLKGDKEMRLLT*WKMPQE
Trigger: TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCAT...TTCTTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAATTGCTAGACCTTGCTaGTTCTGGATCGTCAGTAGA +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEIARPC*FWIVSR
Trigger: TCTACTGACGATCCAGAAGCAGCAAGGTCTAGCAAT...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp AAAACTGAATCAAACCTGGAACATCACTGCTTTCTTGAAATGGAACTGACAAGCGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGAT +
Preference number: 4 (lower is better)
Translates to: KTESNLEHHCFLEMELTSDGKSQ*GKCAND
Trigger: ATCATTCGCACATTTTCCCCATTGACTTTTCCCATC...GCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp CATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAGTCATTAGATTCTCGTaGGTTAACAGAGATGGGAAA +
Preference number: 4 (lower is better)
Translates to: HSVLSRNFLMEGRFLCRTVIRFS*VNRDGK
Trigger: TTTCCCATCTCTGTTAACCCACGAGAATCTAATGAC...TGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGAGGACATGTACTGTaGCAACATAAAGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFGGHVL*QHKEMS
Trigger: GGACATTTCTTTATGTTGCCACAGTACATGTCCTCC...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCTTGTGTTAAGCCACTaGGTTAGGCTGAGTATATCT +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGILVLSH*VRLSIS
Trigger: AGATATACTCAGCCTAACCCAGTGGCTTAACACAAG...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR TCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTACATCACTGCTTTCTTaGAATGGAACTGACAAGCAA +
Preference number: 4 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFTSLLS*NGTDKQ
Trigger: TTGCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGT...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp ATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCTGCAGAACAACTACAGAAGGCATGCTAGCTTATaGGTCATAGAAAACGTTTTT +
Preference number: 4 (lower is better)
Translates to: IEQKFSNGRKVPLQNNYRRHASL*VIENVF
Trigger: AAAAACGTTTTCTATGACGCATAAGCTAGCATGCCT...TCTGTAGTTGTTCTGCAGAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp CTTTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTATTATGTGTTTCACTTaGTTGGTGGTGTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LWLYGSKNHASHHQLRLFIMCFT*LVVFSL
Trigger: GAGGGAAAACACCACCAAGCAAGTGAAACACATAAT...AAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336643.10
CDS-3UTR CCA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LVIWKQESCFSSSIASLWSSGFK*CLGSLN
Trigger: GTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGA...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp AGACAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCATTTATGATCCATCTTaGTACAGGTGGTTATGTGAG +
Preference number: 4 (lower is better)
Translates to: RQNYKAAIHGMISCLQGIIYDPS*YRWLCE
Trigger: CTCACATAACCACCTGTAGCAAGATGGATCATAAAT...GATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAATGGAAGCAAGAATCATaGTTCTCATCATCAATTGCG +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEWKQES*FSSSIA
Trigger: CGCAATTGATGATGAGAAGCATGATTCTTGCTTCCA...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR GCA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAATGAGACTTCTAACTTaGTGGAAGATGCCACAAGAA +
Preference number: 4 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEMRLLT*WKMPQE
Trigger: TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCAT...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
3UTR CAA 72 bp GTATTCTTTAACTTAATTTGCCATTTAAGAGAGCACTaGGAATCTGAAGAAAGTCTATCCCTACCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VFFNLICHLREH*ESEESLSLPRK
Trigger: TTTCCTTGGTAGGGATAGACTTTCTTCAGATTCCAAGTGCTCTCTTAAATGGCAAATTAAGTTAAAGAATAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS CCA 90 bp GAGCCCCATGCAGCGCCGCGTGATGCTCCCCGCCACTCTAGTCGGTaGATTGACCCTTCTTCCCGCCGCAGGGACGCCAGGCCTGACTCT +
Preference number: 5 (lower is better)
Translates to: EPHAAPRDAPRHSSR*IDPSSRRRDARPDS
Trigger: AGAGTCAGGCCTGGCGTCCCTGCGGCGGGAAGAAGGGTCAATCCACCGACTAGAGTGGCGGGGAGCATCACGCGGCGCTGCATGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS TCA 90 bp GCCCTATACCCGGTGCTGCCCATGGTACTGCACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACTACAGCTGCCATGGCCGCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: ALYPVLPMVLHSTGP*PGVADTTAAMAAKW
Trigger: CCACTTGGCGGCCATGGCAGCTGTAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
ENST00000628474.2
CDS GCA 90 bp GACACAAAGCTGTCTCTGCCCTATACCCGGTGCTGCCCATGGTACTaGACTCGACCGGGCCTTGACCCGGAGTCGCCGATACTACAGCTG +
Preference number: 5 (lower is better)
Translates to: DTKLSLPYTRCCPWY*TRPGLDPESPILQL
Trigger: CAGCTGTAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS GCA 90 bp AGCAGCAAAGTTGACACAAAGCTGTCTCTGCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGACCGGGCCTTGACCCGGAGTCGCCG +
Preference number: 5 (lower is better)
Translates to: SSKVDTKLSLPYTRC*PWYCTRPGLDPESP
Trigger: CGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS-3UTR CAA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGACCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCG +
Preference number: 5 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGPVASG*WLCPIP
Trigger: CGGAATAGGGCACAGCCACAAGCCCGATGCCACGGG...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp GTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: VSSCHVPAVLTGWQTALDRGTFL*NVPGNR
Trigger: TCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCG...GTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS TCA 90 bp GAAACCAGCCCACCAGTCCCAGCAAACTCTCCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGGTCTCTAACGATGGGTCCTAGGGGT +
Preference number: 5 (lower is better)
Translates to: ETSPPVPANSPPSLG*GKESCRSLTMGPRG
Trigger: ACCCCTAGGACCCATCGTTAGAGACCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGTTTGCTGGGACTGGTGGGCTGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS GCA 90 bp TTCAGCAGCAAAGTTGACACAAAGCTGTCTCTGCCCTATACCCGGTaGTGCCCATGGTACTGCACTCGACCGGGCCTTGACCCGGAGTCG +
Preference number: 5 (lower is better)
Translates to: FSSKVDTKLSLPYTR*CPWYCTRPGLDPES
Trigger: CGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS GCA 90 bp ATGGGTCCTAGGGGTTCAGCAGCAAAGTTGACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCCCATGGTACTGCACTCGACCGGGCC +
Preference number: 5 (lower is better)
Translates to: MGPRGSAAKLTQSCL*PIPGAAHGTALDRA
Trigger: GGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAACCCCTAGGACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS-3UTR CAA 90 bp TGCCAGCAAGCTCTTCCTCCAGTCAAGAAGGCCTGTGCCACGCTGCTTGGTTCCCGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: CQQALPPVKKACATLLGSRGTFL*NVPGNR
Trigger: TCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCG...GGAACCAAGCAGCGTGGCACAGGCCTTCTTGACTGGAGGAAGAGCTTGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGCAGTAAGCAGCAAATaGTGGCGAGGAGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAAVSSK*WRGEAR
Trigger: TCTAGCCTCTCCTCGCCACAATTTGCTGCTTACTGC...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS CCA 90 bp AAAGTTGACACAAAGCTGTCTCTGCCCTATACCCGGTGCTGCCCATaGTACTGCACTCGACCGGGCCTTGACCCGGAGTCGCCGATACTA +
Preference number: 5 (lower is better)
Translates to: KVDTKLSLPYTRCCP*YCTRPGLDPESPIL
Trigger: TAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS-3UTR CAA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATAC +
Preference number: 5 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLALDRA*TRSRRY
Trigger: GTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGC...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR CAA 90 bp AACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATAC +
Preference number: 5 (lower is better)
Translates to: NTAAVLDESGHDSQSPKGALDRA*TRSRRY
Trigger: GTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGC...CCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR CAA 90 bp CTTGGCTCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATAC +
Preference number: 5 (lower is better)
Translates to: LGSSLGMWRQVFCKGELDALDRA*TRSRRY
Trigger: GTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGC...GTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGAGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp CCCACCTCTCCTGCTCCATTTGATGGAATGGCAGGCTGGATTCAGAGAGGCACGCCTCTCCTGCTCCATTaGATGGAATGGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PTSPAPFDGMAGWIQRGTPLLLH*MEWQAG
Trigger: TCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGG...CGTGCCTCTCTGAATCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCCTGTGCCACGCTGCTaGGTTCCCTGCTGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVPVPRC*VPCCLK
Trigger: CTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCACTCCAACAGTGCACTTaGGGTGATGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: GLRGPQGRNILWGFVLLSLQQCT*GDVDHS
Trigger: AGAATGGTCCACATCACCCAAAGTGCACTGTTGGAG...TGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCCCCTGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATCCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCG +
Preference number: 5 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDPVASG*WLCPIP
Trigger: CGGAATAGGGCACAGCCACAAGCCCGATGCCACGGG...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCCTCTCCTGCTCCATTaGATGGAATGGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: QFWMNLVMILSLPRGSGAPLLLH*MEWQAG
Trigger: TCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGG...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGAGGCAGGAACATCCTTaGGGGGTTTGTGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTRQEHP*GVCAAV
Trigger: GACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp GCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTCATGAGACTTCTAACTaGCTGGAAGATGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: AVTCRLFSLDGKRPWTKAHETSN*LEDATR
Trigger: TCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATG...AGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCACCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCG +
Preference number: 5 (lower is better)
Translates to: SRGLTSFISTAADPVTNSPVASG*WLCPIP
Trigger: CGGAATAGGGCACAGCCACAAGCCCGATGCCACGGG...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAACATCCTTTGGGGGTTaGTGCTGCTGTCATACGGTT +
Preference number: 5 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGTSFGG*CCCHTV
Trigger: AACCGTATGACAGCAGCACAAACCCCCAAAGGATGT...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCCGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCRGTFL*NVPGNR
Trigger: TCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCG...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp GTGCCGGCTGTTCTCACTGGATGGCAAACGGCCCTGGACCAAGGCTGGACCTTGCTTGGCTGTTTTGAATaGGGAAAGAAAGAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: VPAVLTGWQTALDQGWTLLGCFE*GKKEVK
Trigger: TTTCACCTCTTTCTTTCCCAATTCAAAACAGCCAAG...CAAGGTCCAGCCTTGGTCCAGGGCCGTTTGCCATCCAGTGAGAACAGCCGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCAGGCAGGAACATCCTTaGGGGGTTTGTGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGRQEHP*GVCAAV
Trigger: GACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGTCACTGTTCCAGCTATaGAACCAGGGGAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTSLFQL*NQGNCS
Trigger: ACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGA...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTGNRPF*LILAPE
Trigger: CTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCC...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CAA 90 bp AATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCACAAGGCAGGAGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: NLVMILSLPRGSGAHKAGVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...TCCTGCCTTGTGGGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp ACTGAGGAAGTGAGTAGCTGTCACGTGCCGGCTGTTCTCACTGGATGGCAAACGAGCGTGGTGGTGATTTaGGAATTGCTAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: TEEVSSCHVPAVLTGWQTSVVVI*ELLDLA
Trigger: AGCAAGGTCTAGCAATTCCAAAATCACCACCACGCT...CGTTTGCCATCCAGTGAGAACAGCCGGCACGTGACAGCTACTCACTTCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CAA 90 bp ACACTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCGCAGTAAGCAGCAAATaGTGGCGAGGAGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: TLQQFWMNLVMILSLPRGAVSSK*WRGEAR
Trigger: TCTAGCCTCTCCTCGCCACAATTTGCTGCTTACTGC...GCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCAGGCAGGAACATCCTTaGGGGGTTTGTGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLRQEHP*GVCAAV
Trigger: GACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp GGCCCACAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCCATGAGACTTCTAACTaGCTGGAAGATGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: GPQGRNILWGFVLLSYGSHETSN*LEDATR
Trigger: TCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATG...GGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTGTGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGCAGATGGTTCAATCCTaGCCGGAGTTCAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVQMVQS*PEFKAP
Trigger: TGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTG...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CTGCAGCAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCATCACTGTTCCAGCTATaGAACCAGGGGAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: LQQFWMNLVMILSLPRGSSLFQL*NQGNCS
Trigger: ACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGA...TGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp AGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCATCACTGTTCCAGCTATaGAACCAGGGGAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: RQEHPLGVCAAVIRFLCSSLFQL*NQGNCS
Trigger: ACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGA...TGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS TCA 90 bp CCTCAAGAATATCTTCATAAAGGGCATGTACTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCACAGAGAAGGCCAGCACCCAAAACAG +
Preference number: 5 (lower is better)
Translates to: PQEYLHKGHVLLQAR*LPEQFHREGQHPKQ
Trigger: CTGTTTTGGGTGCTGGCCTTCTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAGTACATGCCCTTTATGAAGATATTCTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000538956.5
ENST00000554059.1
ENST00000555245.5
ENST00000555840.5
ENST00000556125.5
ENST00000556605.5
ENST00000557046.1
ENST00000628474.2
CDS CCA 90 bp GCAACACCATCAGCGTCAGTAGAATGCACATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAAACGAAGCCCAGAACGAGGGAAACA +
Preference number: 5 (lower is better)
Translates to: ATPSASVECTWELPI*STSNMKTKPRTRET
Trigger: TGTTTCCCTCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGCTGATGGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557046.1
CDS-3UTR CAA 90 bp ATTTCACAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGCGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: ISQHLQQCTLGDVDHSVLRGTFL*NVPGNR
Trigger: TCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCG...CAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp AAAACTGAATCAAACCTGGAACATCACTGCTTTCTTGAAATGGAACTGACAAGCCCCGTGGCATCGGGCTaGTGGCTGTGCCCTATTCCG +
Preference number: 5 (lower is better)
Translates to: KTESNLEHHCFLEMELTSPVASG*WLCPIP
Trigger: CGGAATAGGGCACAGCCACAAGCCCGATGCCACGGG...GCTTGTCAGTTCCATTTCAAGAAAGCAGTGATGTTCCAGGTTTGATTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGCCTCTCCTGCTCCATTaGATGGAATGGCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVPLLLH*MEWQAG
Trigger: TCCAGCCTGCCATTCCATCAAATGGAGCAGGAGAGG...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGAGCAGTAAGCAGCAAATaGTGGCGAGGAGAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: QHLQQCTLGDVDHSVLSRAVSSK*WRGEAR
Trigger: TCTAGCCTCTCCTCGCCACAATTTGCTGCTTACTGC...TCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCCCTGTGCCACGCTGCTaGGTTCCCTGCTGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLPVPRC*VPCCLK
Trigger: CTTCAGGCAGCAGGGAACCAAGCAGCGTGGCACAGG...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS GCA 90 bp AAGAATATCTTCATAAAGGGCATGTACTCCTTCAGGCACGATGACTaGCAGAGCAGTTCCACAGAGAAGGCCAGCACCCAAAACAGTCAC +
Preference number: 5 (lower is better)
Translates to: KNIFIKGMYSFRHDD*QSSSTEKASTQNSH
Trigger: GTGACTGTTTTGGGTGCTGGCCTTCTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAGTACATGCCCTTTATGAAGATATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000538956.5
ENST00000554059.1
ENST00000555245.5
ENST00000555840.5
ENST00000556125.5
ENST00000556605.5
ENST00000557046.1
ENST00000628474.2
CDS-3UTR CAA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATAC +
Preference number: 5 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEALDRA*TRSRRY
Trigger: GTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGC...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
CDS-3UTR CAA 90 bp GGGCTCAACAAAGCGGCATTTGACACAAAGGTAATTTCTTTGAAGGGGGATAAACGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: GLNKAAFDTKVISLKGDKRGTFL*NVPGNR
Trigger: TCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCG...TTTATCCCCCTTCAAAGAAATTACCTTTGTGTCAAATGCCGCTTTGTTGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGCGTGGTGGTGATTTaGGAATTGCTAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVSVVVI*ELLDLA
Trigger: AGCAAGGTCTAGCAATTCCAAAATCACCACCACGCT...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp GTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTGGTAGCGTGGTGGTGATTTaGGAATTGCTAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: VQSLATMCFRGLIHSDAGSVVVI*ELLDLA
Trigger: AGCAAGGTCTAGCAATTCCAAAATCACCACCACGCT...ACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CGGTTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCAGGGCCCTGAAAGGTTaGCTTGTTAATAGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: RFLCSVPSYHVFQGLNTLRALKG*LVNSEV
Trigger: GACCTCACTATTAACAAGCAAACCTTTCAGGGCCCT...GAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp AAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCCATGAGACTTCTAACTaGCTGGAAGATGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: KAGTSFGGLCCCHTVPVFHETSN*LEDATR
Trigger: TCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATG...GAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PLWTLGIHVEMRKVRQETVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...AGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CAA 90 bp TTAACCTCACCTCCCCTCTGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LTSPPLWTLGIHVEMRKVVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...CACCTTGCGCATCTCTACATGTATTCCTAGAGTCCAGAGGGGAGGTGAGGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp CTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGCCTGCTGAAAGAGGCTTaGGCCAGTAGAACAAATTAC +
Preference number: 5 (lower is better)
Translates to: LCSVPSYHVFQGLNTLRCLLKEA*ASRTNY
Trigger: GTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAG...GCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGATCAATTGCGTCTCTTaGGTAGCCAATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: GRNILWGFVLLSYGSCVQINCVS*VANNSI
Trigger: GATGGAATTATTGGCTACCAAAGAGACGCAATTGAT...CTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CAGTTCTGGATGAATCTGGTCATGATTCTCAGTCTCCCAAGGGGCTCAGGGGCCCATTTAAGAGAGCACTaGGAATCTGAAGAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: QFWMNLVMILSLPRGSGAHLREH*ESEESL
Trigger: TAGACTTTCTTCAGATTCCAAGTGCTCTCTTAAATG...GGCCCCTGAGCCCCTTGGGAGACTGAGAATCATGACCAGATTCATCCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATCAGAACAGGGCTCACTaGGCTGTTTTGAATTGGGAA +
Preference number: 5 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDQNRAH*AVLNWE
Trigger: TTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTG...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CACAAGTTACACATTTCCTTCAGGCCTCCTGAGGTGAATCTAGATGTCTCAGGTACATCCTTTGGGGGTTaGTGCTGCTGTCATACGGTT +
Preference number: 5 (lower is better)
Translates to: HKLHISFRPPEVNLDVSGTSFGG*CCCHTV
Trigger: AACCGTATGACAGCAGCACAAACCCCCAAAGGATGT...ACCTGAGACATCTAGATTCACCTCAGGAGGCCTGAAGGAAATGTGTAACTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCATCACTGTTCCAGCTATaGAACCAGGGGAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: SRGLTSFISTAADPVTNSSLFQL*NQGNCS
Trigger: ACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGA...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CAGGGGCTTAATACACTCCGATGCTGGTGTGTCCTCTTAGTTCTAATCCTCCCCCATTATGTGTTTCACTaGCTTGGTGGTGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QGLNTLRCWCVLLVLILPHYVFH*LGGVFP
Trigger: AGGGAAAACACCACCAAGCAAGTGAAACACATAATG...GGGGAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555840.5
CDS-3UTR CAA 90 bp CAAGGCAGGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCATTATGTGTTTCACTaGCTTGGTGGTGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QGRNILWGFVLLSYGSCVHYVFH*LGGVFP
Trigger: AGGGAAAACACCACCAAGCAAGTGAAACACATAATG...AACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp AATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCCGCTCTAAGCCAGCATGCAAATGTCTTCTGCCTTaGGCATGCAGACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NAKTSKCFLIRFRSKPACKCLLP*ACRPSD
Trigger: GTCAGAAGGTCTGCATGCCAAAGGCAGAAGACATTT...GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CAA 90 bp ACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGTGTCTTCGATTGTCGGATaGAGGGTGGCACAATGTCTT +
Preference number: 5 (lower is better)
Translates to: TLGIHVEMRKVRQETEEVSSIVG*RVAQCL
Trigger: AAGACATTGTGCCACCCTCAATCCGACAATCGAAGA...CACTTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000628474.2
CDS-3UTR CAA 90 bp TTCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGAGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: FLCSVPSYHVFQGLNTLRVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...TCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCAGATGGTTCAATCCTaGCCGGAGTTCAAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GTFKITVPAIEPGELQSYQMVQS*PEFKAP
Trigger: TGGAGCCTTGAACTCCGGCAAGGATTGAACCATCTG...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCACAGAACAGGGCTCACTaGGCTGTTTTGAATTGGGAA +
Preference number: 5 (lower is better)
Translates to: SRGLTSFISTAADPVTNSQNRAH*AVLNWE
Trigger: TTCCCAATTCAAAACAGCCAAGTGAGCCCTGTTCTG...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp TCCTCTCTAGGAATGTGGAGACAGGTATTCTGCAAAGGAGAACTTGACAAGGAAACATCCTTTGGGGGTTaGTGCTGCTGTCATACGGTT +
Preference number: 5 (lower is better)
Translates to: SSLGMWRQVFCKGELDKETSFGG*CCCHTV
Trigger: AACCGTATGACAGCAGCACAAACCCCCAAAGGATGT...TTCCTTGTCAAGTTCTCCTTTGCAGAATACCTGTCTCCACATTCCTAGAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GGAACATCCTTTGGGGGTTTGTGCTGCTGTCATACGGTTCCTGTGTTCAGTCCCGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: GTSFGGLCCCHTVPVFSPVDHSV*SRNFLM
Trigger: CATTAGAAAATTTCTGCTCAATACAGAATGGTCCAC...GGGACTGAACACAGGAACCGTATGACAGCAGCACAAACCCCCAAAGGATGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp GAACTGCAGTCTTATCCCATGAGACTTCTAACTTGCTGGAAGATGCCACAAGAACTCCAACAGTGCACTTaGGGTGATGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: ELQSYPMRLLTCWKMPQELQQCT*GDVDHS
Trigger: AGAATGGTCCACATCACCCAAAGTGCACTGTTGGAG...TTCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATGGGATAAGACTGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGAATGTGTTTCACTTGCTaGGTGGTGTTTTCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QHLQQCTLGDVDHSVLSRMCFTC*VVFSLK
Trigger: CTTGAGGGAAAACACCACCAAGCAAGTGAAACACAT...TCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS TCA 90 bp TCTGATGAGAGCAATGAGCAGGAACATTGTCGTGGTGGAGGACTCTaGTCAAGCATTTCTGGGCATTCTTCTGCTAAAACTTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: SDESNEQEHCRGGGL*SSISGHSSAKTLGN
Trigger: GTTACCCAAAGTTTTAGCAGAAGAATGCCCAGAAATGCTTGATCAGAGTCCTCCACCACGACAATGTTCCTGCTCATTGCTCTCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS GCA 90 bp TCACCCACAACCACTAGACAACAAATTTCCAGTGGCTTTAAATGGTaGTTAGGTTCTTTAAACAGGTGTGGTGGTTCCAAGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SPTTTRQQISSGFKW*LGSLNRCGGSKRVG
Trigger: GCCCACTCTCTTGGAACCACCACACCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGAAATTTGTTGTCTAGTGGTTGTGGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CCA 90 bp GGGTCCCATTTCCATTCAAAGTTCTGCTCTTGTCTGCAGCTGATCTaGGCACAACTGTTTTGGCATCCTCAAGAATATCTTCATAAAGGG +
Preference number: 5 (lower is better)
Translates to: GSHFHSKFCSCLQLI*AQLFWHPQEYLHKG
Trigger: CCCTTTATGAAGATATTCTTGAGGATGCCAAAACAGTTGTGCCCAGATCAGCTGCAGACAAGAGCAGAACTTTGAATGGAAATGGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS-3UTR CAA 90 bp AGCAGAGGGCTCACAAGCTTTATTTCCACAGCTGCTGATCCAGTGACAAATTCAGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SRGLTSFISTAADPVTNSVVILE*LDLAAS
Trigger: AGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCAC...TGAATTTGTCACTGGATCAGCAGCTGTGGAAATAAAGCTTGTGAGCCCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAAGAGGGGAAGGCAAATTaGGAAGTCAGATGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: WTLGIHVEMRKVRQETEEEGKAN*EVRWFN
Trigger: ATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTC...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCTCCAACAGTGCACTTaGGGTGATGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: GTFKITVPAIEPGELQSYLQQCT*GDVDHS
Trigger: AGAATGGTCCACATCACCCAAAGTGCACTGTTGGAG...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TGGACTCTAGGAATACATGTAGAGATGCGCAAGGTGAGACAAGAGACTGAGGAACATGAGACTTCTAACTaGCTGGAAGATGCCACAAGA +
Preference number: 5 (lower is better)
Translates to: WTLGIHVEMRKVRQETEEHETSN*LEDATR
Trigger: TCTTGTGGCATCTTCCAGCAAGTTAGAAGTCTCATG...TTCCTCAGTCTCTTGTCTCACCTTGCGCATCTCTACATGTATTCCTAGAGTCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
CDS-3UTR CAA 90 bp GTTACCAATCTGGTCCACCAGCAACATGAAAACGAAGCCCAGAACGAGGGAAACATGTGTTTCACTTGCTaGGTGGTGTTTTCTTTACTG +
Preference number: 5 (lower is better)
Translates to: VTNLVHQQHENEAQNEGNMCFTC*VVFSLL
Trigger: CAGTAAAGAAAACACCACCAAGCAAGTGAAACACAT...GTTTCCCTCGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CAA 90 bp TTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCCCATGGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: FKITVPAIEPGELQSYPMGNRPF*LILAPE
Trigger: CTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCC...CATGGGATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CAGAGAGGCACGTGCCAAAGGAGCTGTTTAAATCCCTCTAGACATCCCTTTTCATCTGCAAAGGAGAACTaGACAAGGAATGCTACAAAA +
Preference number: 5 (lower is better)
Translates to: QRGTCQRSCLNPSRHPFSSAKEN*TRNATK
Trigger: TTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGA...TGAAAAGGGATGTCTAGAGGGATTTAAACAGCTCCTTTGGCACGTGCCTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000628474.2
CDS-3UTR CAA 90 bp AATGCAAAGACCAGCAAGTGCTTTCTGATTCGATTCCGCTCTAAGCCAGCATGCTCTGCAAAGGAGAACTaGACAAGGAATGCTACAAAA +
Preference number: 5 (lower is better)
Translates to: NAKTSKCFLIRFRSKPACSAKEN*TRNATK
Trigger: TTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGA...GCATGCTGGCTTAGAGCGGAATCGAATCAGAAAGCACTTGCTGGTCTTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628474.2
CDS-3UTR CAA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGAATCAATTGCGTCTCTTaGGTAGCCAATAATTCCATC +
Preference number: 5 (lower is better)
Translates to: QHLQQCTLGDVDHSVLSRINCVS*VANNSI
Trigger: GATGGAATTATTGGCTACCAAAGAGACGCAATTGAT...TCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTAAGGCAGGAACATCCTTaGGGGGTTTGTGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLRQEHP*GVCAAV
Trigger: GACAGCAGCACAAACCCCCAAAGGATGTTCCTGCCT...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GATGTGGACCATTCTGTATTGAGCAGAAATTTTCTAATGGAAGGAAGGTTCCTCCTCCAACAGTGCACTTaGGGTGATGTGGACCATTCT +
Preference number: 5 (lower is better)
Translates to: DVDHSVLSRNFLMEGRFLLQQCT*GDVDHS
Trigger: AGAATGGTCCACATCACCCAAAGTGCACTGTTGGAG...GAGGAACCTTCCTTCCATTAGAAAATTTCTGCTCAATACAGAATGGTCCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGATGAATGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: CRTTTEDFHLTLQQFWMNGNRPF*LILAPE
Trigger: CTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCC...ATTCATCCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp AATCTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAGGGCCCTGAAAGGTTaGCTTGTTAATAGTGAGGTC +
Preference number: 5 (lower is better)
Translates to: NLLVLSHWVRLSISREFLRALKG*LVNSEV
Trigger: GACCTCACTATTAACAAGCAAACCTTTCAGGGCCCT...TAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CAGCATCTCCAACAGTGCACTTTGGGTGATGTGGACCATTCTGTATTGAGCAGACATTTAAGAGAGCACTaGGAATCTGAAGAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: QHLQQCTLGDVDHSVLSRHLREH*ESEESL
Trigger: TAGACTTTCTTCAGATTCCAAGTGCTCTCTTAAATG...TCTGCTCAATACAGAATGGTCCACATCACCCAAAGTGCACTGTTGGAGATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp TCCTGTGTTCAGTCCCTAGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: SCVQSLATMCFRGLIHSDVDHSV*SRNFLM
Trigger: CATTAGAAAATTTCTGCTCAATACAGAATGGTCCAC...ATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCTAGGGACTGAACACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATATGTGTTTCACTTGCTaGGTGGTGTTTTCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: GTFKITVPAIEPGELQSYMCFTC*VVFSLK
Trigger: CTTGAGGGAAAACACCACCAAGCAAGTGAAACACAT...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS CCA 90 bp TATTCACCCACAACCACTAGACAACAAATTTCCAGTGGCTTTAAATaGTGCTTAGGTTCTTTAAACAGGTGTGGTGGTTCCAAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: YSPTTTRQQISSGFK*CLGSLNRCGGSKRV
Trigger: CACTCTCTTGGAACCACCACACCTGTTTAAAGAACCTAAGCACCATTTAAAGCCACTGGAAATTTGTTGTCTAGTGGTTGTGGGTGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS-3UTR CAA 90 bp CAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCAGAGCGTGGTGGTGATTTaGGAATTGCTAGACCTTGCT +
Preference number: 5 (lower is better)
Translates to: QNYKAAIHGMISCLQGIQSVVVI*ELLDLA
Trigger: AGCAAGGTCTAGCAATTCCAAAATCACCACCACGCT...CTGGATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CTCCTTGTGTTAAGCCACTGGGTTAGGCTGAGTATATCTAGAGAATTCCTAAATGAGGGGAAGGCAAATTaGGAAGTCAGATGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: LLVLSHWVRLSISREFLNEGKAN*EVRWFN
Trigger: ATTGAACCATCTGACTTCCAAATTTGCCTTCCCCTC...ATTTAGGAATTCTCTAGATATACTCAGCCTAACCCAGTGGCTTAACACAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTAACATCCTTTGGGGGTTaGTGCTGCTGTCATACGGTT +
Preference number: 5 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLTSFGG*CCCHTV
Trigger: AACCGTATGACAGCAGCACAAACCCCCAAAGGATGT...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp GGGACATTTAAAATCACTGTTCCAGCTATTGAACCAGGGGAACTGCAGTCTTATCTTGGCTGTTTTGAATaGGGAAAGAAAGAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: GTFKITVPAIEPGELQSYLGCFE*GKKEVK
Trigger: TTTCACCTCTTTCTTTCCCAATTCAAAACAGCCAAG...ATAAGACTGCAGTTCCCCTGGTTCAATAGCTGGAACAGTGATTTTAAATGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp TTCCTCTGCAGAACAACTACAGAGGATTTTCACTTAACACTGCAGCAGTTCTGGGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: FLCRTTTEDFHLTLQQFWVDHSV*SRNFLM
Trigger: CATTAGAAAATTTCTGCTCAATACAGAATGGTCCAC...CCAGAACTGCTGCAGTGTTAAGTGAAAATCCTCTGTAGTTGTTCTGCAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCAGATGTGTTTCACTTGCTaGGTGGTGTTTTCCCTCAAG +
Preference number: 5 (lower is better)
Translates to: QNYKAAIHGMISCLQGIQMCFTC*VVFSLK
Trigger: CTTGAGGGAAAACACCACCAAGCAAGTGAAACACAT...CTGGATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TTTACAAGGGATCCAGAAAAAGGGACATTTAAAATCACTGTTCCAGCTATTGAAGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: FTRDPEKGTFKITVPAIEGNRPF*LILAPE
Trigger: CTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCC...TTCAATAGCTGGAACAGTGATTTTAAATGTCCCTTTTTCTGGATCCCTTGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp CTGAAGAAAGTCTATCCCTACCAAGGAAACGGAGTCAAATTGCAATTAAGATTACTGCTGAAAGAGGCTTaGGCCAGTAGAACAAATTAC +
Preference number: 5 (lower is better)
Translates to: LKKVYPYQGNGVKLQLRLLLKEA*ASRTNY
Trigger: GTAATTTGTTCTACTGGCCAAAGCCTCTTTCAGCAG...TAATCTTAATTGCAATTTGACTCCGTTTCCTTGGTAGGGATAGACTTTCTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp CAAAATTATAAGGCAGCCATCCATGGAATGATTTCATGTTTACAAGGGATCCAGCATTATGTGTTTCACTaGCTTGGTGGTGTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: QNYKAAIHGMISCLQGIQHYVFH*LGGVFP
Trigger: AGGGAAAACACCACCAAGCAAGTGAAACACATAATG...CTGGATCCCTTGTAAACATGAAATCATTCCATGGATGGCTGCCTTATAATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336643.10
ENST00000555840.5
ENST00000556605.5
CDS-3UTR CAA 90 bp TTGGTTATATGGAAGCAAGAATCATGCTTCTCATCATCAATTGCGTCTCTTTGGTCTGCAAAGGAGAACTaGACAAGGAATGCTACAAAA +
Preference number: 5 (lower is better)
Translates to: LVIWKQESCFSSSIASLWSAKEN*TRNATK
Trigger: TTTTGTAGCATTCCTTGTCAAGTTCTCCTTTGCAGA...CCAAAGAGACGCAATTGATGATGAGAAGCATGATTCTTGCTTCCATATAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS-3UTR CAA 90 bp TGCGTCATAGAAAACGTTTTTACAAACTACTACGTCCACTGCCCTGAAGAAACTGTGGACCATTCTGTATaGAGCAGAAATTTTCTAATG +
Preference number: 5 (lower is better)
Translates to: CVIENVFTNYYVHCPEETVDHSV*SRNFLM
Trigger: CATTAGAAAATTTCTGCTCAATACAGAATGGTCCAC...AGTTTCTTCAGGGCAGTGGACGTAGTAGTTTGTAAAAACGTTTTCTATGACGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000031146.8
ENST00000336643.10
CDS CCA 72 bp GCAGCGCCGCGTGATGCTCCCCGCCACTCTAGTCGGTaGATTGACCCTTCTTCCCGCCGCAGGGACGCCAGG +
Preference number: 6 (lower is better)
Translates to: AAPRDAPRHSSR*IDPSSRRRDAR
Trigger: CCTGGCGTCCCTGCGGCGGGAAGAAGGGTCAATCCACCGACTAGAGTGGCGGGGAGCATCACGCGGCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS CAA 72 bp CGCCGCGTGATGCTCCCCGCCACTCTAGTCGGTGGATaGACCCTTCTTCCCGCCGCAGGGACGCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: RRVMLPATLVGG*TLLPAAGTPGL
Trigger: CAGGCCTGGCGTCCCTGCGGCGGGAAGAAGGGTCAATCCACCGACTAGAGTGGCGGGGAGCATCACGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS CAA 90 bp CCCATGCAGCGCCGCGTGATGCTCCCCGCCACTCTAGTCGGTGGATaGACCCTTCTTCCCGCCGCAGGGACGCCAGGCCTGACTCTAGGC +
Preference number: 6 (lower is better)
Translates to: PMQRRVMLPATLVGG*TLLPAAGTPGLTLG
Trigger: GCCTAGAGTCAGGCCTGGCGTCCCTGCGGCGGGAAGAAGGGTCAATCCACCGACTAGAGTGGCGGGGAGCATCACGCGGCGCTGCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS TCA 72 bp CCGGTGCTGCCCATGGTACTGCACTCGACCGGGCCTTaGCCCGGAGTCGCCGATACTACAGCTGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: PVLPMVLHSTGP*PGVADTTAAMA
Trigger: GGCCATGGCAGCTGTAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS CAA 72 bp CCCGGTGCTGCCCATGGTACTGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATACTACAGCTGCCATGGC +
Preference number: 6 (lower is better)
Translates to: PGAAHGTALDRA*TRSRRYYSCHG
Trigger: GCCATGGCAGCTGTAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS CAA 90 bp TGCCCTATACCCGGTGCTGCCCATGGTACTGCACTCGACCGGGCCTaGACCCGGAGTCGCCGATACTACAGCTGCCATGGCCGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: CPIPGAAHGTALDRA*TRSRRYYSCHGRQV
Trigger: CACTTGGCGGCCATGGCAGCTGTAGTATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000556605.5
ENST00000628474.2
CDS GCA 72 bp CTGTCTCTGCCCTATACCCGGTGCTGCCCATGGTACTaGACTCGACCGGGCCTTGACCCGGAGTCGCCGATA +
Preference number: 6 (lower is better)
Translates to: LSLPYTRCCPWY*TRPGLDPESPI
Trigger: TATCGGCGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS CCA 72 bp ACAAAGCTGTCTCTGCCCTATACCCGGTGCTGCCCATaGTACTGCACTCGACCGGGCCTTGACCCGGAGTCG +
Preference number: 6 (lower is better)
Translates to: TKLSLPYTRCCP*YCTRPGLDPES
Trigger: CGACTCCGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000556605.5
ENST00000628474.2
CDS GCA 72 bp GTTGACACAAAGCTGTCTCTGCCCTATACCCGGTGCTaGCCATGGTACTGCACTCGACCGGGCCTTGACCCG +
Preference number: 6 (lower is better)
Translates to: VDTKLSLPYTRC*PWYCTRPGLDP
Trigger: CGGGTCAAGGCCCGGTCGAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS TCA 72 bp CCACCAGTCCCAGCAAACTCTCCTCCGAGCCTGGGATaGGGAAAGGAGTCCTGCAGGTCTCTAACGATGGGT +
Preference number: 6 (lower is better)
Translates to: PPVPANSPPSLG*GKESCRSLTMG
Trigger: ACCCATCGTTAGAGACCTGCAGGACTCCTTTCCTCATCCCAGGCTCGGAGGAGAGTTTGCTGGGACTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CAA 90 bp CTAGCTGCCGGAAGTGACTGTGCCTCTATGATCCAAAAGGCTCTTTaGCGTTGCACTTTCGACGACTTCCGGCGGCTCCTCTCGCGAGGA +
Preference number: 6 (lower is better)
Translates to: LAAGSDCASMIQKAL*RCTFDDFRRLLSRG
Trigger: TCCTCGCGAGAGGAGCCGCCGGAAGTCGTCGAAAGTGCAACGCAAAAGAGCCTTTTGGATCATAGAGGCACAGTCACTTCCGGCAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS CAA 90 bp TCCTGCAGGTCTCTAACGATGGGTCCTAGGGGTTCAGCAGCAAAGTaGACACAAAGCTGTCTCTGCCCTATACCCGGTGCTGCCCATGGT +
Preference number: 6 (lower is better)
Translates to: SCRSLTMGPRGSAAK*TQSCLCPIPGAAHG
Trigger: ACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAACCCCTAGGACCCATCGTTAGAGACCTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS GCA 72 bp AGGGGTTCAGCAGCAAAGTTGACACAAAGCTGTCTCTaGCCTATACCCGGTGCTGCCCATGGTACTGCACTC +
Preference number: 6 (lower is better)
Translates to: RGSAAKLTQSCL*PIPGAAHGTAL
Trigger: GAGTGCAGTACCATGGGCAGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CAA 72 bp GGAAGTGACTGTGCCTCTATGATCCAAAAGGCTCTTTaGCGTTGCACTTTCGACGACTTCCGGCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GSDCASMIQKAL*RCTFDDFRRLL
Trigger: GAGGAGCCGCCGGAAGTCGTCGAAAGTGCAACGCAAAAGAGCCTTTTGGATCATAGAGGCACAGTCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556125.5
CDS CAA 72 bp TCTCTAACGATGGGTCCTAGGGGTTCAGCAGCAAAGTaGACACAAAGCTGTCTCTGCCCTATACCCGGTGCT +
Preference number: 6 (lower is better)
Translates to: SLTMGPRGSAAK*TQSCLCPIPGA
Trigger: AGCACCGGGTATAGGGCAGAGACAGCTTTGTGTCAACTTTGCTGCTGAACCCCTAGGACCCATCGTTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CAA 90 bp TTTAGGCCTTCCCACCAGCAGATGTGTTCACGAGGCACCTTCCTCTaGAACGTACCCGGCAACAGACCCTTTTTGCTGATATTAGCACCA +
Preference number: 6 (lower is better)
Translates to: FRPSHQQMCSRGTFL*NVPGNRPFLLILAP
Trigger: TGGTGCTAATATCAGCAAAAAGGGTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCGTGAACACATCTGCTGGTGGGAAGGCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS TCA 72 bp TATCTTCATAAAGGGCATGTACTCCTTCAGGCACGATaGCTGCCAGAGCAGTTCCACAGAGAAGGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: YLHKGHVLLQAR*LPEQFHREGQH
Trigger: GTGCTGGCCTTCTCTGTGGAACTGCTCTGGCAGTCATCGTGCCTGAAGGAGTACATGCCCTTTATGAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000538956.5
ENST00000554059.1
ENST00000555245.5
ENST00000555840.5
ENST00000556125.5
ENST00000556605.5
ENST00000557046.1
ENST00000628474.2
CDS CCA 72 bp TCAGCGTCAGTAGAATGCACATGGGAGTTACCAATCTaGTCCACCAGCAACATGAAAACGAAGCCCAGAACG +
Preference number: 6 (lower is better)
Translates to: SASVECTWELPI*STSNMKTKPRT
Trigger: CGTTCTGGGCTTCGTTTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557046.1
CDS CAA 72 bp CCCACTTGGGTCCCATTTCCATTCAAAGTTCTGCTCTaGTCTGCAGCTGATCTGGGCACAACTGTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: PTWVPFPFKVLL*SAADLGTTVLA
Trigger: TGCCAAAACAGTTGTGCCCAGATCAGCTGCAGACAAGAGCAGAACTTTGAATGGAAATGGGACCCAAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS CAA 72 bp CCAGTGACCTTTGCTCTTAACCGACCCACTTCTGCTTaGACTGACCACTTCCACTTCTCAGTAGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: PVTFALNRPTSA*TDHFHFSVAIA
Trigger: AGCAATGGCTACTGAGAAGTGGAAGTGGTCAGTCAAAGCAGAAGTGGGTCGGTTAAGAGCAAAGGTCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS CAA 90 bp TCACGAGGCACCTTCCTCTTGAACGTACCCGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAGAAAGCTTACAGCAATCTAAGGTCC +
Preference number: 6 (lower is better)
Translates to: SRGTFLLNVPGNRPF*LILAPEKAYSNLRS
Trigger: GGACCTTAGATTGCTGTAAGCTTTCTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCCGGGTACGTTCAAGAGGAAGGTGCCTCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CCA 72 bp CCCAAAGCAACACCATCAGCGTCAGTAGAATGCACATaGGAGTTACCAATCTGGTCCACCAGCAACATGAAA +
Preference number: 6 (lower is better)
Translates to: PKATPSASVECT*ELPIWSTSNMK
Trigger: TTTCATGTTGCTGGTGGACCAGATTGGTAACTCCCATGTGCATTCTACTGACGCTGATGGTGTTGCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557046.1
CDS CAA 72 bp TGGACAACCAGACCCAGCGTGGTGGTGATTTTGGAATaGCTAGACCTTGCTGCTTCTGGATCCTCAAGAATA +
Preference number: 6 (lower is better)
Translates to: WTTRPSVVVILE*LDLAASGSSRI
Trigger: TATTCTTGAGGATCCAGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCACCACGCTGGGTCTGGTTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000031146.8
CDS CAA 72 bp ACAGTCACCAGCTTCAGTCGTTCGTTGCCGCCATTTTaGAGTAGGGCTAATGAAAGATGTCTGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: TVTSFSRSLPPF*SRANERCLMSL
Trigger: CAGTGACATCAGACATCTTTCATTAGCCCTACTCAAAAATGGCGGCAACGAACGACTGAAGCTGGTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555245.5
CDS TCA 72 bp AGCAATGAGCAGGAACATTGTCGTGGTGGAGGACTCTaGTCAAGCATTTCTGGGCATTCTTCTGCTAAAACT +
Preference number: 6 (lower is better)
Translates to: SNEQEHCRGGGL*SSISGHSSAKT
Trigger: AGTTTTAGCAGAAGAATGCCCAGAAATGCTTGATCAGAGTCCTCCACCACGACAATGTTCCTGCTCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS GCA 72 bp AGCTACCATGTGTTTCAGGGGCTTAATACACTCCGATaGTGGTGTGTCCTCTTAGTTCTAATCCTTACTCAG +
Preference number: 6 (lower is better)
Translates to: SYHVFQGLNTLR*WCVLLVLILTQ
Trigger: CTGAGTAAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556605.5
CDS CCA 72 bp TACCATGTGTTTCAGGGGCTTAATACACTCCGATGCTaGTGTGTCCTCTTAGTTCTAATCCTTACTCAGTCC +
Preference number: 6 (lower is better)
Translates to: YHVFQGLNTLRC*CVLLVLILTQS
Trigger: GGACTGAGTAAGGATTAGAACTAAGAGGACACACCAGCATCGGAGTGTATTAAGCCCCTGAAACACATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556605.5
CDS CAA 72 bp ACCTTCCTCTTGAACGTACCCGGCAACAGACCCTTTTaGCTGATATTAGCACCAGAGAAAGCTTACAGCAAT +
Preference number: 6 (lower is better)
Translates to: TFLLNVPGNRPF*LILAPEKAYSN
Trigger: ATTGCTGTAAGCTTTCTCTGGTGCTAATATCAGCAAAAAGGGTCTGTTGCCGGGTACGTTCAAGAGGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS GCA 72 bp ACCCAGCGTGGTGGTGATTTTGGAATTGCTAGACCTTaGTGCTTCTGGATCCTCAAGAATATCTTCATAAAG +
Preference number: 6 (lower is better)
Translates to: TQRGGDFGIARP*CFWILKNIFIK
Trigger: CTTTATGAAGATATTCTTGAGGATCCAGAAGCAGCAAGGTCTAGCAATTCCAAAATCACCACCACGCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000031146.8
CDS CAA 72 bp CAACAAGTAAAATGTCTTGCACATCCCCAAATACTGTaGCCAGTGACCTTTGCTCTTAACCGACCCACTTCT +
Preference number: 6 (lower is better)
Translates to: QQVKCLAHPQIL*PVTFALNRPTS
Trigger: AGAAGTGGGTCGGTTAAGAGCAAAGGTCACTGGCAACAGTATTTGGGGATGTGCAAGACATTTTACTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS TCA 72 bp AGATGTCTGATGTCACTGTCTATACCGGTGATCACTTaGGCCGTATGTTTAATAACGAAAGTACGGAAGACA +
Preference number: 6 (lower is better)
Translates to: RCLMSLSIPVIT*AVCLITKVRKT
Trigger: TGTCTTCCGTACTTTCGTTATTAAACATACGGCTCAAGTGATCACCGGTATAGACAGTGACATCAGACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555245.5
CDS CCA 72 bp AGATTCTCGTGGGTTAACAGAGATGGGAAAAGTCAATaGGGAAAATGTGCGAATGATCGATTTCTTCGATTG +
Preference number: 6 (lower is better)
Translates to: RFSWVNRDGKSQ*GKCANDRFLRL
Trigger: CAATCGAAGAAATCGATCATTCGCACATTTTCCCCATTGACTTTTCCCATCTCTGTTAACCCACGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000031146.8
ENST00000336643.10
ENST00000554059.1
ENST00000555840.5
ENST00000556605.5
ENST00000628474.2
CDS CAA 72 bp AAGATGTCTGATGTCACTGTCTATACCGGTGATCACTaGAGCCGTATGTTTAATAACGAAAGTACGGAAGAC +
Preference number: 6 (lower is better)
Translates to: KMSDVTVYTGDH*SRMFNNESTED
Trigger: GTCTTCCGTACTTTCGTTATTAAACATACGGCTCAAGTGATCACCGGTATAGACAGTGACATCAGACATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555245.5
CDS CAA 72 bp AGCCATTGCTTTGAATGTGGTTTGCCTTCAGGATCGTaGGTAAAGCCATGTTTCATCTTCTGTTACAATTCT +
Preference number: 6 (lower is better)
Translates to: SHCFECGLPSGS*VKPCFIFCYNS
Trigger: AGAATTGTAACAGAAGATGAAACATGGCTTTACCAACGATCCTGAAGGCAAACCACATTCAAAGCAATGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554059.1
CDS CAA 72 bp CTGCTTTGTCTGATGCAATCACATTATGTGTTTCACTaGCTTGGTGGTGTTTTCCCTCAAGAATATCTTCAT +
Preference number: 6 (lower is better)
Translates to: LLCLMQSHYVFH*LGGVFPQEYLH
Trigger: ATGAAGATATTCTTGAGGGAAAACACCACCAAGCAAGTGAAACACATAATGTGATTGCATCAGACAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336643.10
ENST00000555245.5
ENST00000555840.5
ENST00000556605.5
ENST00000557046.1