RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A8 (Homo sapiens)

Ensembl gene IDs: ENSG00000138821

Ensembl transcript IDs: ENST00000356736.5, ENST00000394833.6, ENST00000424970.6, ENST00000424970.7, ENST00000502903.1, ENST00000510255.5, ENST00000512337.1, ENST00000512657.5, ENST00000514000.5, ENST00000682227.1, ENST00000682243.1, ENST00000682549.1, ENST00000682932.1, ENST00000683173.1, ENST00000683221.1, ENST00000683401.1, ENST00000683412.1, ENST00000683462.1, ENST00000683634.1, ENST00000683706.1, ENST00000683916.1, ENST00000684289.1, ENST00000684386.1

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCAGGCCTGGTGGTCTGGGCATCTCTCTTTTCTCTTGCAGAGGTaGCAAAACTCGACCTCTGTCCTCTTAGGGTCCTACCTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: SQAWWSGHLSFLLQR*QNSTSVLLGSYLGP
Trigger: TGGGCCCAGGTAGGACCCTAAGAGGACAGAGGTCGAGTTTTGCCACCTCTGCAAGAGAAAAGAGAGATGCCCAGACCACCAGGCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 90 bp AAGTTTCAGAGGGCCAGGTTCAGACACAGTGCCCACTTCAAAGCCTaGGAAATCAAAGATTTCCCAGGCCTGGTGGTCTGGGCATCTCTC +
Preference number: 1 (lower is better)
Translates to: KFQRARFRHSAHFKA*EIKDFPGLVVWASL
Trigger: GAGAGATGCCCAGACCACCAGGCCTGGGAAATCTTTGATTTCCCAGGCTTTGAAGTGGGCACTGTGTCTGAACCTGGCCCTCTGAAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 90 bp GTGCCCACTTCAAAGCCTGGGAAATCAAAGATTTCCCAGGCCTGGTaGTCTGGGCATCTCTCTTTTCTCTTGCAGAGGTGGCAAAACTCG +
Preference number: 1 (lower is better)
Translates to: VPTSKPGKSKISQAW*SGHLSFLLQRWQNS
Trigger: CGAGTTTTGCCACCTCTGCAAGAGAAAAGAGAGATGCCCAGACCACCAGGCCTGGGAAATCTTTGATTTCCCAGGCTTTGAAGTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 90 bp ACAGTGCCCACTTCAAAGCCTGGGAAATCAAAGATTTCCCAGGCCTaGTGGTCTGGGCATCTCTCTTTTCTCTTGCAGAGGTGGCAAAAC +
Preference number: 1 (lower is better)
Translates to: TVPTSKPGKSKISQA*WSGHLSFLLQRWQN
Trigger: GTTTTGCCACCTCTGCAAGAGAAAAGAGAGATGCCCAGACCACCAGGCCTGGGAAATCTTTGATTTCCCAGGCTTTGAAGTGGGCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR GCA 90 bp GGACAGGGAGTGGCCCAGGGAGGAGTTGGACATCAGAATTTAGATTaGAAAAAGGAACACTGGGGAGGGCTGACTTGGTTAGTTTGCTTT +
Preference number: 1 (lower is better)
Translates to: GQGVAQGGVGHQNLD*KKEHWGGLTWLVCF
Trigger: AAAGCAAACTAACCAAGTCAGCCCTCCCCAGTGTTCCTTTTTGCAATCTAAATTCTGATGTCCAACTCCTCCCTGGGCCACTCCCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR TCA 90 bp TACTGTTATGTCAACAAAAGGGAAATTCCTTTAATGTCCCAGCCCTaGGCCAGTGCAAGGGCAACTCACATTAGCAGCTGGGATGTCCAG +
Preference number: 1 (lower is better)
Translates to: YCYVNKREIPLMSQP*ASARATHISSWDVQ
Trigger: CTGGACATCCCAGCTGCTAATGTGAGTTGCCCTTGCACTGGCTCAGGGCTGGGACATTAAAGGAATTTCCCTTTTGTTGACATAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR GCA 90 bp CCCATATGGGAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATaGAGTGAGAGTCAATCGCTTCTATACTGGTTGCACAAAGGACAG +
Preference number: 1 (lower is better)
Translates to: PIWEKSPYREKKTQG*SESQSLLYWLHKGQ
Trigger: CTGTCCTTTGTGCAACCAGTATAGAAGCGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTCCCATATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR TCA 90 bp AGTTCCAATTTCTCATCATTGATAGGGAGAATGGTATTCCTTCTGTaGCAGGGAGGCCATCTCCCATGTGGGAATTTCATCTCCTGCTGT +
Preference number: 1 (lower is better)
Translates to: SSNFSSLIGRMVFLL*QGGHLPCGNFISCC
Trigger: ACAGCAGGAGATGAAATTCCCACATGGGAGATGGCCTCCCTGTCACAGAAGGAATACCATTCTCCCTATCAATGATGAGAAATTGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR TCA 90 bp AATGGTCATAACTATGTCATATGCCAACCTCTAACCAATCACTGTTaGAGGTGCTGGTATTGCAGAGATGTGGAGGTGAAATACTCCAGA +
Preference number: 1 (lower is better)
Translates to: NGHNYVICQPLTNHC*RCWYCRDVEVKYSR
Trigger: TCTGGAGTATTTCACCTCCACATCTCTGCAATACCAGCACCTTCAACAGTGATTGGTTAGAGGTTGGCATATGACATAGTTATGACCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CAA 90 bp TCAAAGATTTCCCAGGCCTGGTGGTCTGGGCATCTCTCTTTTCTCTaGCAGAGGTGGCAAAACTCGACCTCTGTCCTCTTAGGGTCCTAC +
Preference number: 2 (lower is better)
Translates to: SKISQAWWSGHLSFL*QRWQNSTSVLLGSY
Trigger: GTAGGACCCTAAGAGGACAGAGGTCGAGTTTTGCCACCTCTGCAAGAGAAAAGAGAGATGCCCAGACCACCAGGCCTGGGAAATCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CAA 90 bp GGGACAGGGAGTGGCCCAGGGAGGAGTTGGACATCAGAATTTAGATaGCAAAAAGGAACACTGGGGAGGGCTGACTTGGTTAGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: GTGSGPGRSWTSEFR*QKGTLGRADLVSLL
Trigger: AAGCAAACTAACCAAGTCAGCCCTCCCCAGTGTTCCTTTTTGCAATCTAAATTCTGATGTCCAACTCCTCCCTGGGCCACTCCCTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGGGCCCAGGGAGGAGTTaGACATCAGAATTTAGATTG +
Preference number: 2 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARGPGRS*TSEFRL
Trigger: CAATCTAAATTCTGATGTCCAACTCCTCCCTGGGCC...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR TCA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGCTTCCTTACTCCTTTTaGGAAACTTCACAGCACACA +
Preference number: 2 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARLPYSF*ETSQHT
Trigger: TGTGTGCTGTGAAGTTTCTCAAAAGGAGTAAGGAAG...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR GCA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGCGCTTCTATACTGGTTaGACAAAGGACAGTAGTTTT +
Preference number: 2 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARRFYTG*TKDSSF
Trigger: AAAACTACTGTCCTTTGTGCAACCAGTATAGAAGCG...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp CTTAACCTCTTCACTCTCTTCCTCTTGGAGATTGCATGTAGCCTCCTAAGAGTAAGGTGTGCACAGGATTaGTTCCTTCTTAGGGCTGCG +
Preference number: 2 (lower is better)
Translates to: LNLFTLFLLEIACSLLRVRCAQD*FLLRAA
Trigger: CGCAGCCCTAAGAAGGAACCAATCCTGTGCACACCT...TACTCTTAGGAGGCTACATGCAATCTCCAAGAGGAAGAGAGTGAAGAGGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp CTTAACCTCTTCACTCTCTTCCTCTTGGAGATTGCATGTAGCCTCCTAAGAGTACACAGTTGTGGAGGCTaGAAGTCCAAGATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: LNLFTLFLLEIACSLLRVHSCGG*KSKIQV
Trigger: CACCTGAATCTTGGACTTCCAGCCTCCACAACTGTG...TACTCTTAGGAGGCTACATGCAATCTCCAAGAGGAAGAGAGTGAAGAGGTTAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp CTCCAGGCCCAAAAGATAACTCCAGAAAGTGAGGAACTAGAGCATAGGCCAGAAATTGTCTCACAGTTGTaGAGGCTGGAAGTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: LQAQKITPESEELEHRPEIVSQL*RLEVQD
Trigger: ATCTTGGACTTCCAGCCTCCACAACTGTGAGACAAT...TTCTGGCCTATGCTCTAGTTCCTCACTTTCTGGAGTTATCTTTTGGGCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGAAGAGCAACTCACAATaGTTTGCACCATTAGGAAAA +
Preference number: 2 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARKSNSQ*FAPLGK
Trigger: TTTTCCTAATGGTGCAAACCATTGTGAGTTGCTCTT...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR GCA 90 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATGCAGTGAGAGTCAATCGTTCCACTTTCTGCTGTaGTTCTTCAGCACATCACCT +
Preference number: 2 (lower is better)
Translates to: EKSPYREKKTQGCSESQSFHFLL*FFSTSP
Trigger: AGGTGATGTGCTGAAGAAGCACAGCAGAAAGTGGAA...CGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATGCAGTGAGAGTCAATCGTGGGGAGGGCTGACTTaGTTAGTTTGCTTTAATTAC +
Preference number: 2 (lower is better)
Translates to: EKSPYREKKTQGCSESQSWGGLT*LVCFNY
Trigger: GTAATTAAAGCAAACTAACCAAGTCAGCCCTCCCCA...CGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACTCTCTGAAACCATTTaGATCTTTGATCCTACCATA +
Preference number: 2 (lower is better)
Translates to: ETEVLPALHTVLPFVRGALSETI*IFDPTI
Trigger: TATGGTAGGATCAAAGATTCAAATGGTTTCAGAGAG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR GCA 90 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATGCAGTGAGAGTCAATCGCTTTTCCATCTCCCCTaGAATAATCAAACACTCTCT +
Preference number: 2 (lower is better)
Translates to: EKSPYREKKTQGCSESQSLFHLP*NNQTLS
Trigger: AGAGAGTGTTTGATTATTGCAGGGGAGATGGAAAAG...CGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACTATCCAGCTTTTCGTaGAATCTGGTGAAGTTTATA +
Preference number: 2 (lower is better)
Translates to: ETEVLPALHTVLPFVRGALSSFS*NLVKFI
Trigger: TATAAACTTCACCAGATTCCACGAAAAGCTGGATAG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTTTCGTGGAATCTGGTaGAGTTTATACTTAGCGATA +
Preference number: 2 (lower is better)
Translates to: ANTWCTETEVLPALHTVLFRGIW*SLYLAI
Trigger: TATCGCTAAGTATAAACTTCACCAGATTCCACGAAA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCTGTTCTGCCATTTGTaGGGGGTGCAACCACAACAT +
Preference number: 2 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFLFCHL*GVQPQH
Trigger: ATGTTGTGGTTGCACCCCTCACAAATGGCAGAACAG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCACTGTTCTGCCATTTGTaGGGGGTGCAACCACAACAT +
Preference number: 2 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPLFCHL*GVQPQH
Trigger: ATGTTGTGGTTGCACCCCTCACAAATGGCAGAACAG...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAAACACATGGTGCACTaGAACCGAGGTGTTACCAGC +
Preference number: 2 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPKHMVH*NRGVTS
Trigger: GCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR TCA 90 bp CCAGATTCTGATGATTTGCTGGCAATTGTTGACATTGTAGATGCATCACCACGAGCAGAGATGTGGAGGTaGAATACTCCAGATAATGAA +
Preference number: 2 (lower is better)
Translates to: PDSDDLLAIVDIVDASPRAEMWR*NTPDNE
Trigger: TTCATTATCTGGAGTATTTCACCTCCACATCTCTGC...TCGTGGTGATGCATCTACAATGTCAACAATTGCCAGCAAATCATCAGAATCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp TTCCATACCTCTCTCCCAGATTCTGATGATTTGCTGGCAATTGTTGACATTGTAAAAACAGTAGCAAAATaGCTGCTCCAGGTGTCACAC +
Preference number: 2 (lower is better)
Translates to: FHTSLPDSDDLLAIVDIVKTVAK*LLQVSH
Trigger: GTGTGACACCTGGAGCAGCCATTTTGCTACTGTTTT...TACAATGTCAACAATTGCCAGCAAATCATCAGAATCTGGGAGAGAGGTATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CCA 90 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATGCAGTGAGAGTCAATCGACAGGTCTGTCTGTTTaGGCTTTTCTCATAAAATGT +
Preference number: 2 (lower is better)
Translates to: EKSPYREKKTQGCSESQSTGLSV*AFLIKC
Trigger: ACATTTTATGAGAAAAGCCCAAACAGACAGACCTGT...CGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CAA 90 bp AGTAATAAAGTGCCACAACTGGGTAGCTTAAATAACAAAAATGTATaGTCTCACAGTTGTGGAGGCTGGAAGTCCAAGATTCAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: SNKVPQLGSLNNKNV*SHSCGGWKSKIQVC
Trigger: GCACACCTGAATCTTGGACTTCCAGCCTCCACAACTGTGAGACAATACATTTTTGTTATTTAAGCTACCCAGTTGTGGCACTTTATTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CAA 90 bp GCACATTTTGATGGCATAATTCTTAACCTCTTCACTCTCTTCCTCTaGGAGATTGCATGTAGCCTCCTAAGAGTACGAAGTTTAACTCTA +
Preference number: 2 (lower is better)
Translates to: AHFDGIILNLFTLFL*EIACSLLRVRSLTL
Trigger: TAGAGTTAAACTTCGTACTCTTAGGAGGCTACATGCAATCTCCAAGAGGAAGAGAGTGAAGAGGTTAAGAATTATGCCATCAAAATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR TCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCTCTCTTGCTTCATGGTaGTATCTAATATGCATGGAA +
Preference number: 2 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSSLASW*YLICME
Trigger: TTCCATGCATATTAGATATCACCATGAAGCAAGAGA...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR-3UTR GCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCTACATGATTATAGAATaGATGTCTCTTGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSYMIIE*MSLASW
Trigger: CCATGAAGCAAGAGACATGCATTCTATAATCATGTA...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR CCA 72 bp AGGGCCAGGTTCAGACACAGTGCCCACTTCAAAGCCTaGGAAATCAAAGATTTCCCAGGCCTGGTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: RARFRHSAHFKA*EIKDFPGLVVW
Trigger: CCAGACCACCAGGCCTGGGAAATCTTTGATTTCCCAGGCTTTGAAGTGGGCACTGTGTCTGAACCTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 72 bp TGGTGGTCTGGGCATCTCTCTTTTCTCTTGCAGAGGTaGCAAAACTCGACCTCTGTCCTCTTAGGGTCCTAC +
Preference number: 3 (lower is better)
Translates to: WWSGHLSFLLQR*QNSTSVLLGSY
Trigger: GTAGGACCCTAAGAGGACAGAGGTCGAGTTTTGCCACCTCTGCAAGAGAAAAGAGAGATGCCCAGACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CAA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGTCTAACCAATCACTGTaGAAGGTGCTGGTATTGCAG +
Preference number: 3 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARSNQSL*KVLVLQ
Trigger: CTGCAATACCAGCACCTTCAACAGTGATTGGTTAGA...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 72 bp GAAGAGGGACTCCAGGGAAGAGGCTTGTCAATTCAGTaGCTAAGGATGTCCTCATGGACCATCTTTCCACTT +
Preference number: 3 (lower is better)
Translates to: EEGLQGRGLSIQ*LRMSSWTIFPL
Trigger: AAGTGGAAAGATGGTCCATGAGGACATCCTTAGCCACTGAATTGACAAGCCTCTTCCCTGGAGTCCCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CAA 90 bp CAACTCACATTAGCAGCTGGGATGTCCAGGAACAGGAAGTTTCAGAGGGCCAGGTCTTCCTTACTCCTTTaGAGAAACTTCACAGCACAC +
Preference number: 3 (lower is better)
Translates to: QLTLAAGMSRNRKFQRARSSLLL*RNFTAH
Trigger: GTGTGCTGTGAAGTTTCTCAAAAGGAGTAAGGAAGA...CCTGGCCCTCTGAAACTTCCTGTTCCTGGACATCCCAGCTGCTAATGTGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR GCA 72 bp GGATGTCCTCATGGACCATCTTTCCACTTTCTGCTGTaGTTCTTCAGCACATCACCTTCATCCCCATGCTAT +
Preference number: 3 (lower is better)
Translates to: GCPHGPSFHFLL*FFSTSPSSPCY
Trigger: ATAGCATGGGGATGAAGGTGATGTGCTGAAGAAGCACAGCAGAAAGTGGAAAGATGGTCCATGAGGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR GCA 72 bp GCTAAGGATGTCCTCATGGACCATCTTTCCACTTTCTaGTGTGCTTCTTCAGCACATCACCTTCATCCCCAT +
Preference number: 3 (lower is better)
Translates to: AKDVLMDHLSTF*CASSAHHLHPH
Trigger: ATGGGGATGAAGGTGATGTGCTGAAGAAGCACAGCAGAAAGTGGAAAGATGGTCCATGAGGACATCCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CAA 90 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATGCAGTGAGAGTCAATCGTTGAAGGTGCTGGTATaGCAGAGATGTGGAGGTGAA +
Preference number: 3 (lower is better)
Translates to: EKSPYREKKTQGCSESQSLKVLV*QRCGGE
Trigger: TTCACCTCCACATCTCTGCAATACCAGCACCTTCAA...CGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 72 bp GGTATTCCTTCTGTGACAGGGAGGCCATCTCCCATGTaGGAATTTCATCTCCTGCTGTTAAGACACAGAATT +
Preference number: 3 (lower is better)
Translates to: GIPSVTGRPSPM*EFHLLLLRHRI
Trigger: AATTCTGTGTCTTAACAGCAGGAGATGAAATTCCCACATGGGAGATGGCCTCCCTGTCACAGAAGGAATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CAA 90 bp CTTAACCTCTTCACTCTCTTCCTCTTGGAGATTGCATGTAGCCTCCTAAGAGTAGAGTCACGGCCAGGCTaGACTTCTAATGATGAGAAA +
Preference number: 3 (lower is better)
Translates to: LNLFTLFLLEIACSLLRVESRPG*TSNDEK
Trigger: TTTCTCATCATTAGAAGTCAAGCCTGGCCGTGACTC...TACTCTTAGGAGGCTACATGCAATCTCCAAGAGGAAGAGAGTGAAGAGGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR TCA 72 bp TTCTCATCATTGATAGGGAGAATGGTATTCCTTCTGTaGCAGGGAGGCCATCTCCCATGTGGGAATTTCATC +
Preference number: 3 (lower is better)
Translates to: FSSLIGRMVFLL*QGGHLPCGNFI
Trigger: GATGAAATTCCCACATGGGAGATGGCCTCCCTGTCACAGAAGGAATACCATTCTCCCTATCAATGATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR GCA 72 bp GAAAAGAGCCCATATAGGGAAAAGAAGACCCAAGGATaGAGTGAGAGTCAATCGCTTCTATACTGGTTGCAC +
Preference number: 3 (lower is better)
Translates to: EKSPYREKKTQG*SESQSLLYWLH
Trigger: GTGCAACCAGTATAGAAGCGATTGACTCTCACTGCATCCTTGGGTCTTCTTTTCCCTATATGGGCTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR-3UTR CAA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACTTTCAGGATATAACTaGTATTTTCCCCTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: ETEVLPALHTVLPFVRGALSGYN*YFPLSL
Trigger: CAGACTCAGGGGAAAATACAAGTTATATCCTGAAAG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR TCA 72 bp AACTATGTCATATGCCAACCTCTAACCAATCACTGTTaGAGGTGCTGGTATTGCAGAGATGTGGAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: NYVICQPLTNHC*RCWYCRDVEVK
Trigger: TTTCACCTCCACATCTCTGCAATACCAGCACCTTCAACAGTGATTGGTTAGAGGTTGGCATATGACATAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 72 bp AATAACAAAAATGTATTGTCTCACAGTTGTGGAGGCTaGAAGTCCAAGATTCAGGTGTGCACAGGATTGGTT +
Preference number: 3 (lower is better)
Translates to: NNKNVLSHSCGG*KSKIQVCTGLV
Trigger: AACCAATCCTGTGCACACCTGAATCTTGGACTTCCAGCCTCCACAACTGTGAGACAATACATTTTTGTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR CCA 72 bp GTTGGACATCAGAATTTAGATTGCAAAAAGGAACACTaGGGAGGGCTGACTTGGTTAGTTTGCTTTAATTAC +
Preference number: 3 (lower is better)
Translates to: VGHQNLDCKKEH*GGLTWLVCFNY
Trigger: GTAATTAAAGCAAACTAACCAAGTCAGCCCTCCCCAGTGTTCCTTTTTGCAATCTAAATTCTGATGTCCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424970.6
3UTR TCA 72 bp TGTCAATCATTTTCCTCACCATCAAATCACCTTAAGTaGCTTGGGAGTGTGAATCTAGGATGTTCAATTTTA +
Preference number: 3 (lower is better)
Translates to: CQSFSSPSNHLK*LGSVNLGCSIL
Trigger: TAAAATTGAACATCCTAGATTCACACTCCCAAGTCACTTAAGGTGATTTGATGGTGAGGAAAATGATTGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAGCCTGGGCTTCCCCTTaGGGGCCCGCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAAWASP*GPATGC
Trigger: GCAGCCCGTCGCGGGCCCTCAAGGGGAAGCCCAGGC...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGGCCTGGGCTTCCCCTTaGGGGCCCGCGACGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLAWASP*GPATGC
Trigger: GCAGCCCGTCGCGGGCCCTCAAGGGGAAGCCCAGGC...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGGCTCCGAGTCAGAGGTaGCGCGGGACGCCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLAPSQR*RGTPLV
Trigger: AACCAGGGGCGTCCCGCGCCACCTCTGACTCGGAGC...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACGCGCACTGGCGTCCTTaGCCAAGGGCGGGAGCGTCA +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENAHWRP*PRAGAS
Trigger: TGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGC...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAAGCAAGTGCTGGAGCTaGGCCGCCGACAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGASKCWS*AADRLR
Trigger: TCTGAGCCTGTCGGCGGCGCAGCTCCAGCACTTGCT...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGATCTGCTCCAGCAAGTaGTGGAGCTGCGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLICSSK*WSCAAD
Trigger: GTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCAGAT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTGCGGGGCATTGAAGTaGCAGCGTAGCCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLCGALK*QRSRGE
Trigger: CTCCCCTCGGCTACGCTGCCACTTCAATGCCCCGCA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCGTCAGTGCTCGGCGCTaGTCCGAGTCAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSVSARR*SESEVA
Trigger: CGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGAC...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACTGCGGGGCATTGAAGTaGCAGCGTAGCCGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENCGALK*QRSRGE
Trigger: CTCCCCTCGGCTACGCTGCCACTTCAATGCCCCGCA...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCAGGCGCGGGACGCCCCTaGTTCTCCGACGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASGAGRP*FSDAFE
Trigger: TTCGAAGGCGTCGGAGAACCAGGGGCGTCCCGCGCC...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCTGCTCCAGCAAGTGCTaGAGCTGCGCCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSCSSKC*SCAADR
Trigger: CCTGTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCA...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAATCTGCTCCAGCAAGTaGTGGAGCTGCGCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKICSSK*WSCAAD
Trigger: GTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCAGAT...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGAAACACTGGTTGAAGTaGAGCTGGCCAGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLKHWLK*SWPGSG
Trigger: CCCGGAGCCTGGCCAGCTGCACTTCAACCAGTGTTT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCGACCTGCGGGGCATTaGAGTGGCAGCGTAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSRPAGH*SGSVAE
Trigger: CTCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGTCAGTGCTCGGCGCTaGTCCGAGTCAGAGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSVSARR*SESEVA
Trigger: CGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGAC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAGGCGCGGGACGCCCCTaGTTCTCCGACGCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPGAGRP*FSDAFE
Trigger: TTCGAAGGCGTCGGAGAACCAGGGGCGTCCCGCGCC...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCTGGTTGAAGTGCAGCTaGCCAGGCTCCGGGACGCCC +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSWLKCS*PGSGTP
Trigger: GGGCGTCCCGGAGCCTGGCCAGCTGCACTTCAACCA...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR CAA 72 bp AGTGGCCCAGGGAGGAGTTGGACATCAGAATTTAGATaGCAAAAAGGAACACTGGGGAGGGCTGACTTGGTT +
Preference number: 4 (lower is better)
Translates to: SGPGRSWTSEFR*QKGTLGRADLV
Trigger: AACCAAGTCAGCCCTCCCCAGTGTTCCTTTTTGCAATCTAAATTCTGATGTCCAACTCCTCCCTGGGCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424970.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCAGTTAAACACTGGTTaGAGTGCAGCTGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLQLNTG*SAAGQA
Trigger: AGCCTGGCCAGCTGCACTTCAACCAGTGTTTAACTG...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAAAACACATGGTGCACTaGAACCGAGGTGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAKHMVH*NRGVTS
Trigger: GCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTT...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATGCTCCAGCAAGTGCTaGAGCTGCGCCGCCGACAGG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPCSSKC*SCAADR
Trigger: CCTGTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATGGTTGAAGTGCAGCTaGCCAGGCTCCGGGACGCCC +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPWLKCS*PGSGTP
Trigger: GGGCGTCCCGGAGCCTGGCCAGCTGCACTTCAACCA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACCATCGATGAAATTGTaGAGGGCATCGCAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAPSMKL*RASQSV
Trigger: AACGCTCTGCGATGCCCTCCACAATTTCATCGATGG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGAGACTGCTGGACAGATaGCAGAGAATTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLRLLDR*QRIWSW
Trigger: CCAGCTCCAAATTCTCTGTCATCTGTCCAGCAGTCT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCATTGCTATGGAAGTACTaGGTCCCTGAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGALLWKY*VPEGET
Trigger: TGTCTCTCCTTCAGGGACTCAGTACTTCCATAGCAA...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCATGCTCATCCCTGCATTaGGTAGGATCACAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGACSSLH*VGSQSL
Trigger: GAGACTTTGTGATCCTACTCAATGCAGGGATGAGCA...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACAGTTAATCTGTCCTTaGTGTACAGCAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAQLICP*CTAVQL
Trigger: CAGCTGGACTGCTGTACATCAAGGACAGATTAACTG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCAGCAGCTCGCGACCTaGGGGGCATTGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFQQLAT*GALKWQ
Trigger: CTGCCACTTCAATGCCCCGCAGGTCGCGAGCTGCTG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCACAGCAGCTCGCGACCTaGGGGGCATTGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPQQLAT*GALKWQ
Trigger: CTGCCACTTCAATGCCCCGCAGGTCGCGAGCTGCTG...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAGCAAGTGCTGGAGCTaGGCCGCCGACAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPSKCWS*AADRLR
Trigger: TCTGAGCCTGTCGGCGGCGCAGCTCCAGCACTTGCT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACTTGGTCTTGTTTTGTaGTTGGGCCGATCCTCACAT +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGALGLVL*LGRSSH
Trigger: ATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCCCCGGATCCGGGTTTaGAAACGCCCCAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: HGILKNRYFPKAPIYQASPRIRV*KRPRIC
Trigger: GCAAATCCTGGGGCGTTTGCAAACCCGGATCCGGGG...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394833.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTTGCTATGGAAGTACTaGGTCCCTGAAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLLLWKY*VPEGET
Trigger: TGTCTCTCCTTCAGGGACTCAGTACTTCCATAGCAA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAATGCAGAAAGGAAGTTaGATAGCAAGGCTTGTCGAG +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAMQKGS*IARLVE
Trigger: CTCGACAAGCCTTGCTATTCAACTTCCTTTCTGCAT...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCAAACACTGGTTGAAGTaGAGCTGGCCAGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSKHWLK*SWPGSG
Trigger: CCCGGAGCCTGGCCAGCTGCACTTCAACCAGTGTTT...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCAAGGCTCCAGAAACGCTaGGTGGCAGTAGCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASRLQKR*VAVALK
Trigger: TTTGAGGGCTACTGCCACGCAGCGTTTCTGGAGCCT...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394833.6
CDS-3UTR TCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACAATCGTCCCTATTTCTaGCAGTTTGGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENNRPYF*QFGPLQ
Trigger: TTGAAGGGGCCCAAACTGTCAGAAATAGGGACGATT...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCAGAAGTACTGAGTCCCTaGAGGAGAGACAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASEVLSP*RRDKVQ
Trigger: CTGCACCTTGTCTCTCCTTCAGGGACTCAGTACTTC...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCATGTGACAGCAGGATTTaGATAGCATGTCACACCATT +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGACDSRI*IACHTI
Trigger: AATGGTGTGACATGCTATGCAAATCCTGCTGTCACA...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTGTTGCCCACCAAAATaGCAAAAGCTAGCCCAACAT +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLCCPPK*QKLAQH
Trigger: ATGTTGGGCTAGCTTTTGGCATTTTGGTGGGCAACA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAAAAGCAAACACATGGTaGACTGAAACCGAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAKANTW*TETEVL
Trigger: TAACACCTCGGTTTCAGTGCACCATGTGTTTGCTTT...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAGGGCCGATCCTCACATaGGTGAAAGTTCAATTGCTG +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKGPILT*VKVQLL
Trigger: CAGCAATTGAACTTTCACCCATGTGAGGATCGGCCC...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACCACAAAGCAAACACATaGTGCACTGAAACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENHKANT*CTETEV
Trigger: CACCTCGGTTTCAGTGCACCATGTGTTTGCTTTGTG...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCAGTTAATCTGTCCTTaGTGTACAGCAGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSQLICP*CTAVQL
Trigger: CAGCTGGACTGCTGTACATCAAGGACAGATTAACTG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTGTGACAGCAGGATTTaGATAGCATGTCACACCATT +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLCDSRI*IACHTI
Trigger: AATGGTGTGACATGCTATGCAAATCCTGCTGTCACA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTAAACGCCCCAGGATTTaGGTACATATGCTCCTCCCG +
Preference number: 4 (lower is better)
Translates to: HGILKNRYFPKAPIYQASKRPRI*VHMLLP
Trigger: CGGGAGGAGCATATGTACGCAAATCCTGGGGCGTTT...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394833.6
CDS-3UTR CCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAAAGTCTCCTAACTCGTaGGGAAACTCCTCACATAGG +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKKSPNS*GNSSHR
Trigger: CCTATGTGAGGAGTTTCCCCACGAGTTAGGAGACTT...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCACAAAGCAAACACATaGTGCACTGAAACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSHKANT*CTETEV
Trigger: CACCTCGGTTTCAGTGCACCATGTGTTTGCTTTGTG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAGAAGTCTTTTCTGAATaGCTCTCGATCACACATAAG +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAEVFSE*LSITHK
Trigger: CTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTC...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR CAA 72 bp CCAACCTCTAACCAATCACTGTTGAAGGTGCTGGTATaGCAGAGATGTGGAGGTGAAATACTCCAGATAATG +
Preference number: 4 (lower is better)
Translates to: PTSNQSLLKVLV*QRCGGEILQIM
Trigger: CATTATCTGGAGTATTTCACCTCCACATCTCTGCAATACCAGCACCTTCAACAGTGATTGGTTAGAGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCAACCTCTGTATCTCTaGCAGGTCCGCGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFQPLYL*QVRGET
Trigger: AGTTTCACCGCGGACCTGTCAGAGATACAGAGGTTG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356736.5
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCATATTTGGGTAGCATTTaGAAAGCCATGAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAYLGSI*KAMKGK
Trigger: TTTTCCCTTCATGGCTTTTCAAATGCTACCCAAATA...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCGATCCTCACATGGGTaGAAGTTCAATTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSRSSHG*KFNCCK
Trigger: CTTACAGCAATTGAACTTTCACCCATGTGAGGATCG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAGAAGTACTGAGTCCCTaGAGGAGAGACAAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPEVLSP*RRDKVQ
Trigger: CTGCACCTTGTCTCTCCTTCAGGGACTCAGTACTTC...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCATCTCTTGCTTCATGGTaGTATCTAATATGCATGGAA +
Preference number: 4 (lower is better)
Translates to: ETEVLPALHTVLPFVRGASLASW*YLICME
Trigger: TTCCATGCATATTAGATATCACCATGAAGCAAGAGA...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCTGTTCTGCCATTTGTaGGGGGTGCAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: HGILKNRYFPKAPIYQASLFCHL*GVQPQH
Trigger: ATGTTGTGGTTGCACCCCTCACAAATGGCAGAACAG...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCTGTTCTGCCATTTGTaGGGGGTGCAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSLFCHL*GVQPQH
Trigger: ATGTTGTGGTTGCACCCCTCACAAATGGCAGAACAG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTCAAATCACCTTAAGTaGCTTGGGAGTGTGAATCTA +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLSNHLK*LGSVNL
Trigger: TAGATTCACACTCCCAAGTCACTTAAGGTGATTTGA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACCAATCCGAGGAGAGATaGCAGATTAATAATCGTCAC +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENQSEER*QINNRH
Trigger: GTGACGATTATTAATCTGGCATCTCTCCTCGGATTG...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAATGTTGCCCACCAAAATaGCAAAAGCTAGCCCAACAT +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKCCPPK*QKLAQH
Trigger: ATGTTGGGCTAGCTTTTGGCATTTTGGTGGGCAACA...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGGGCCGATCCTCACATaGGTGAAAGTTCAATTGCTG +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSGPILT*VKVQLL
Trigger: CAGCAATTGAACTTTCACCCATGTGAGGATCGGCCC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGT +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSVLFCA*ADPHMG
Trigger: ACCCATGTGAGGATCGGCCCAAGCACAAAACAAGAC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR CAA 72 bp GATGGCATAATTCTTAACCTCTTCACTCTCTTCCTCTaGGAGATTGCATGTAGCCTCCTAAGAGTACGAAGT +
Preference number: 4 (lower is better)
Translates to: DGIILNLFTLFL*EIACSLLRVRS
Trigger: ACTTCGTACTCTTAGGAGGCTACATGCAATCTCCAAGAGGAAGAGAGTGAAGAGGTTAAGAATTATGCCATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAGACTGCTGGACAGATaGCAGAGAATTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPRLLDR*QRIWSW
Trigger: CCAGCTCCAAATTCTCTGTCATCTGTCCAGCAGTCT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGAACATTCCAGCATTCTaGATCATGAAGAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLNIPAF*IMKKVK
Trigger: TTTCACCTTCTTCATGATTCAGAATGCTGGAATGTT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTAAACACATGGTGCACTaGAACCGAGGTGTTACCAGC +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFKHMVH*NRGVTS
Trigger: GCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTT...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACGGAAAATGTAATTCCTaGGATCATTGTTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENGKCNS*DHCWAL
Trigger: CAAAGCCCAACAATGATCTCAGGAATTACATTTTCC...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCTTGGTCTTGTTTTGTaGTTGGGCCGATCCTCACAT +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSLGLVL*LGRSSH
Trigger: ATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACGGGATCAAATCCAAATaGCTCTGGAATAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENGIKSK*LWNKLE
Trigger: TTCCAACTTATTCCAGAGGCATTTGGATTTGATCCC...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCTTGGAGCGAAATTGTTaGCCACCAAAATGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSLERNC*PPKCQK
Trigger: CTTTTGGCATTTTGGTGGGCAACAATTTCGCTCCAA...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCAAAGCAAACACATGGTaGACTGAAACCGAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSKANTW*TETEVL
Trigger: TAACACCTCGGTTTCAGTGCACCATGTGTTTGCTTT...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTTCAGCAGTTAAACACTaGTTGAAGTGCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HGILKNRYFPKAPIYQASSAVKH*LKCSWP
Trigger: TGGCCAGCTGCACTTCAACCAGTGTTTAACTGCTGA...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGT +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFVLFCA*ADPHMG
Trigger: ACCCATGTGAGGATCGGCCCAAGCACAAAACAAGAC...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCATCGATGAAATTGTaGAGGGCATCGCAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFPSMKL*RASQSV
Trigger: AACGCTCTGCGATGCCCTCCACAATTTCATCGATGG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACATATCCCCAAACTTCTaGATGACTTGGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENISPNF*MTWSCF
Trigger: AAAACAAGACCAAGTCATTCAGAAGTTTGGGGATAT...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAATCGTCCCTATTTCTaGCAGTTTGGGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPNRPYF*QFGPLQ
Trigger: TTGAAGGGGCCCAAACTGTCAGAAATAGGGACGATT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATGCTCATCCCTGCATTaGGTAGGATCACAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPCSSLH*VGSQSL
Trigger: GAGACTTTGTGATCCTACTCAATGCAGGGATGAGCA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACCTCTCTGAAACCATTTaGATCTTTGATCCTACCATA +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENLSETI*IFDPTI
Trigger: TATGGTAGGATCAAAGATTCAAATGGTTTCAGAGAG...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACTTTCGTGGAATCTGGTaGAGTTTATACTTAGCGATA +
Preference number: 4 (lower is better)
Translates to: RYFPKAPIYQASQTDTENFRGIW*SLYLAI
Trigger: TATCGCTAAGTATAAACTTCACCAGATTCCACGAAA...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCACAATCCGAGGAGAGATaGCAGATTAATAATCGTCAC +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASQSEER*QINNRH
Trigger: GTGACGATTATTAATCTGGCATCTCTCCTCGGATTG...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCAACCAAACACAGCAACTaGCTTCTCAACATAACTGTC +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASTKHSN*LLNITV
Trigger: GACAGTTATGTTGAGAAGGCAGTTGCTGTGTTTGGT...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTTCAGCAGTTAAACACTaGTTGAAGTGCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFSAVKH*LKCSWP
Trigger: TGGCCAGCTGCACTTCAACCAGTGTTTAACTGCTGA...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAATTGGAGCTGGTTATTTaGGTAGCATTTGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKLELVI*VAFEKP
Trigger: TGGCTTTTCAAATGCTACCCAAATAACCAGCTCCAA...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGAAATCCAAATGCCTCTaGAATAAGTTGGAAAATTGC +
Preference number: 4 (lower is better)
Translates to: ANTWCTETEVLPALHTVLKSKCL*NKLENC
Trigger: GCAATTTTCCAACTTATTCCAGAGGCATTTGGATTT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAAGTCTCCTAACTCGTaGGGAAACTCCTCACATAGG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPKSPNS*GNSSHR
Trigger: CCTATGTGAGGAGTTTCCCCACGAGTTAGGAGACTT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCGATCCTCACATGGGTaGAAGTTCAATTGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFRSSHG*KFNCCK
Trigger: CTTACAGCAATTGAACTTTCACCCATGTGAGGATCG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTATGCAGAAAGGAAGTTaGATAGCAAGGCTTGTCGAG +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFMQKGS*IARLVE
Trigger: CTCGACAAGCCTTGCTATTCAACTTCCTTTCTGCAT...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAATTTCGTGGAATCTGGTaGAGTTTATACTTAGCGATA +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKFRGIW*SLYLAI
Trigger: TATCGCTAAGTATAAACTTCACCAGATTCCACGAAA...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp ATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAAAATATAGAGGAACATaGCTCCAGCAAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: IGISQRLLYTRHLRLTLKKYRGT*LQQVQI
Trigger: TATTTGCACTTGCTGGAGGCATGTTCCTCTATATTT...TTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCACATAACTGTCGACTTTaGGATCAAATCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASHNCRL*DQIQMP
Trigger: AGGCATTTGGATTTGATCCCAAAGTCGACAGTTATG...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCATATCATTCATCTCTaGAAACATATCTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSHIIHL*KHICQR
Trigger: TCTCTGGCAGATATGTTTCCAGAGATGAATGATATG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCTCAAATCACCTTAAGTaGCTTGGGAGTGTGAATCTA +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSSNHLK*LGSVNL
Trigger: TAGATTCACACTCCCAAGTCACTTAAGGTGATTTGA...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGGAAAATGTAATTCCTaGGATCATTGTTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSGKCNS*DHCWAL
Trigger: CAAAGCCCAACAATGATCTCAGGAATTACATTTTCC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTACCAAACACAGCAACTaGCTTCTCAACATAACTGTC +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFTKHSN*LLNITV
Trigger: GACAGTTATGTTGAGAAGGCAGTTGCTGTGTTTGGT...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATTGGAGCGAAATTGTTaGCCACCAAAATGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPLERNC*PPKCQK
Trigger: CTTTTGGCATTTTGGTGGGCAACAATTTCGCTCCAA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCTTGGAGCTGGTTATTTaGGTAGCATTTGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSLELVI*VAFEKP
Trigger: TGGCTTTTCAAATGCTACCCAAATAACCAGCTCCAA...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCAGATTTCTTTATCAGTaGAGTCAAAATCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSRFLYQ*SQNQSE
Trigger: CTCGGATTGATTTTGACTCCACTGATAAAGAAATCT...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCATAACTGTCGACTTTaGGATCAAATCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSHNCRL*DQIQMP
Trigger: AGGCATTTGGATTTGATCCCAAAGTCGACAGTTATG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCACTATCCAGCTTTTCGTaGAATCTGGTGAAGTTTATA +
Preference number: 4 (lower is better)
Translates to: FPLSLSVYMIIECMSLASLSSFS*NLVKFI
Trigger: TATAAACTTCACCAGATTCCACGAAAAGCTGGATAG...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTATATCCCCAAACTTCTaGATGACTTGGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HGILKNRYFPKAPIYQASISPNF*MTWSCF
Trigger: AAAACAAGACCAAGTCATTCAGAAGTTTGGGGATAT...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCAAATATAGAGGAACATaGCTCCAGCAAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSKYRGT*LQQVQI
Trigger: TATTTGCACTTGCTGGAGGCATGTTCCTCTATATTT...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTGAAGTCTTTTCTGAATaGCTCTCGATCACACATAAG +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFEVFSE*LSITHK
Trigger: CTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTC...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATATTTGGGTAGCATTTaGAAAGCCATGAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPYLGSI*KAMKGK
Trigger: TTTTCCCTTCATGGCTTTTCAAATGCTACCCAAATA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTAACATTCCAGCATTCTaGATCATGAAGAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFNIPAF*IMKKVK
Trigger: TTTCACCTTCTTCATGATTCAGAATGCTGGAATGTT...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTTCTCTTGCTTCATGGTaGTATCTAATATGCATGGAA +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFSLASW*YLICME
Trigger: TTCCATGCATATTAGATATCACCATGAAGCAAGAGA...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATGGAAAAGTATAGGCTaGACACAAAGGAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPWKSIG*TQRKSF
Trigger: AAAAGACTTCCTTTGTGTTCAGCCTATACTTTTCCA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTTCTCTATCTTCTAAATaGGTAAACAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFSLSSK*VNRLCL
Trigger: AAGACAGAGCCTGTTTACTCATTTAGAAGATAGAGA...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR TCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATCTCTATCTTCTAAATaGGTAAACAGGCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPSLSSK*VNRLCL
Trigger: AAGACAGAGCCTGTTTACTCATTTAGAAGATAGAGA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCACATATCATTCATCTCTaGAAACATATCTGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPHIIHL*KHICQR
Trigger: TCTCTGGCAGATATGTTTCCAGAGATGAATGATATG...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCTATCCAGCTTTTCGTaGAATCTGGTGAAGTTTATA +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFLSSFS*NLVKFI
Trigger: TATAAACTTCACCAGATTCCACGAAAAGCTGGATAG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR GCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATACATGATTATAGAATaGATGTCTCTTGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPYMIIE*MSLASW
Trigger: CCATGAAGCAAGAGACATGCATTCTATAATCATGTA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTAGATTTCTTTATCAGTaGAGTCAAAATCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFRFLYQ*SQNQSE
Trigger: CTCGGATTGATTTTGACTCCACTGATAAAGAAATCT...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCATGCAAATATAATATTTaGAGCGAAATTGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPCKYNI*SEIVAH
Trigger: GTGGGCAACAATTTCGCTCCAAATATTATATTTGCA...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CCA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTTGCAAATATAATATTTaGAGCGAAATTGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFCKYNI*SEIVAH
Trigger: GTGGGCAACAATTTCGCTCCAAATATTATATTTGCA...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
3UTR CAA 72 bp TTAGCATATCCATCATCTCAAATAGTTGTCATTTCTTaGTGTTGGGAACATTCATATGTTCCTTCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: LAYPSSQIVVIS*CWEHSYVPSSY
Trigger: GTAGCTAGAAGGAACATATGAATGTTCCCAACACAAAGAAATGACAACTATTTGAGATGATGGATATGCTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.6
CDS CCA 90 bp CCGCCAGCAACAGGAGCCCGGCCACCGCGCGACCCGGGGCCATCCTaGCCTGGGCTTCCCCTTGAGGGCCCGCGACGGGCTGCCGCGCAG +
Preference number: 5 (lower is better)
Translates to: PPATGARPPRDPGPS*PGLPLEGPRRAAAQ
Trigger: CTGCGCGGCAGCCCGTCGCGGGCCCTCAAGGGGAAGCCCAGGCCAGGATGGCCCCGGGTCGCGCGGTGGCCGGGCTCCTGTTGCTGGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 90 bp ACGGGCTGCCGCGCAGAGGGACGCGCGCGGGCGCACTGGCGTCCTTaGCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTGCTCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: TGCRAEGRARAHWRP*PRAGASVLGAAPSQ
Trigger: CTGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGCCCGCGCGCGTCCCTCTGCGCGGCAGCCCGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 90 bp GCACTGGCGTCCTTGCCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTaGTCCGAGTCAGAGGTGGCGCGGGACGCCCCTGGTTCTCCGACG +
Preference number: 5 (lower is better)
Translates to: ALASLPKGGSVSARR*SESEVARDAPGSPT
Trigger: CGTCGGAGAACCAGGGGCGTCCCGCGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 90 bp AGCTGGCCAGGCTCCGGGACGCCCACGCGGGAGGCGGCTCCCATCTaGTCCAGCAAGTGCTGGAGCTGCGCCGCCGACAGGCTCAGATTC +
Preference number: 5 (lower is better)
Translates to: SWPGSGTPTREAAPI*SSKCWSCAADRLRF
Trigger: GAATCTGAGCCTGTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCAGATGGGAGCCGCCTCCCGCGTGGGCGTCCCGGAGCCTGGCCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 90 bp CCAAGGGCGGGAGCGTCAGTGCTCGGCGCTGCTCCGAGTCAGAGGTaGCGCGGGACGCCCCTGGTTCTCCGACGCCTTCGAAAGAACAGC +
Preference number: 5 (lower is better)
Translates to: PRAGASVLGAAPSQR*RGTPLVLRRLRKNS
Trigger: GCTGTTCTTTCGAAGGCGTCGGAGAACCAGGGGCGTCCCGCGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 90 bp CCAGAAACGCTGCGTGGCAGTAGCCCTCAAACGCCCGGCCGGGCATaGGGCCAGACGCCCCGGATCCGGGTTTGCAAACGCCCCAGGATT +
Preference number: 5 (lower is better)
Translates to: PETLRGSSPQTPGRA*GQTPRIRVCKRPRI
Trigger: AATCCTGGGGCGTTTGCAAACCCGGATCCGGGGCGTCTGGCCCCATGCCCGGCCGGGCGTTTGAGGGCTACTGCCACGCAGCGTTTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394833.6
ENST00000683916.1
CDS TCA 90 bp CTCCGACGCCTTCGAAAGAACAGCAGCTCGCGACCTGCGGGGCATTaGAGTGGCAGCGTAGCCGAGGGGAGCGATAGGCGGAGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LRRLRKNSSSRPAGH*SGSVAEGSDRRSGP
Trigger: GGGCCCACTCCGCCTATCGCTCCCCTCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCGCGAGCTGCTGTTCTTTCGAAGGCGTCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS-3UTR CAA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAGCGACCTGCGGGGCATaGAAGTGGCAGCGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAATCGA*KWQRSR
Trigger: TCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCGC...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCGGCGCACTGGCGTCCTaGCCCAAGGGCGGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSGALAS*PKGGSV
Trigger: GACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGCC...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS GCA 90 bp GTCTTTCTGCTTTATTCTCTCCGCCGCAAACTTAGAAGTGAGACGTaGAGTCCCCAAGGAGCTGCAGAAAAGGGCTCTTCCGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VFLLYSLRRKLRSET*SPQGAAEKGSSGVL
Trigger: CAGGACTCCGGAAGAGCCCTTTTCTGCAGCTCCTTGGGGACTGCACGTCTCACTTCTAAGTTTGCGGCGGAGAGAATAAAGCAGAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683916.1
CDS CCA 90 bp GTCTCTGCGTCTTTCTCTCTGCGTGTCAACGTAAGACTCGGTCTCTaGATCTCTCTCTCTTTCTGTCTCCCGCCCCCACAACCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: VSASFSLRVNVRLGL*ISLSFCLPPPQPLY
Trigger: ATACAGAGGTTGTGGGGGCGGGAGACAGAAAGAGAGAGAGATCCAGAGACCGAGTCTTACGTTGACACGCAGAGAGAAAGACGCAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000356736.5
ENST00000424970.7
ENST00000512657.5
ENST00000682243.1
ENST00000682549.1
ENST00000683173.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000684289.1
ENST00000684386.1
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCGCGACCTGCGGGGCATaGAAGTGGCAGCGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSATCGA*KWQRSR
Trigger: TCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCGC...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGGGTCTTGTTTTGTGCTaGGGCCGATCCTCACATGGG +
Preference number: 5 (lower is better)
Translates to: ANTWCTETEVLPALHTVLGLVLC*GRSSHG
Trigger: CCCATGTGAGGATCGGCCCAAGCACAAAACAAGACC...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGCCCCGGATCCGGGTTaGCAAACGCCCCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSAPDPG*QTPQDL
Trigger: CAAATCCTGGGGCGTTTGCAAACCCGGATCCGGGGC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394833.6
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCGGTCTTGTTTTGTGCTaGGGCCGATCCTCACATGGG +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSGLVLC*GRSSHG
Trigger: CCCATGTGAGGATCGGCCCAAGCACAAAACAAGACC...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCAGTGCTCATCCCTGCATaGAGTAGGATCACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAVLIPA*SRITKS
Trigger: AGACTTTGTGATCCTACTCAATGCAGGGATGAGCAC...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGCCATTTGTGAGGGGTGCACCAGTTAATCTGTCCTaGATGTACAGCAGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ETEVLPALHTVLPFVRGAPVNLS*MYSSPA
Trigger: AGCTGGACTGCTGTACATCAAGGACAGATTAACTGG...TGCACCCCTCACAAATGGCAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS CCA 90 bp AGGGAGAATGGTATTCCTTCTGTGACAGGGAGGCCATCTCCCATGTaGGAATTTCATCTCCTGCTGTTAAGACACAGAATTAAGATCAGA +
Preference number: 5 (lower is better)
Translates to: RENGIPSVTGRPSPM*EFHLLLLRHRIKIR
Trigger: TCTGATCTTAATTCTGTGTCTTAACAGCAGGAGATGAAATTCCCACATGGGAGATGGCCTCCCTGTCACAGAAGGAATACCATTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.7
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCGCCTCTCCTATCTGTTaGTTTGTCTGTCTCTGCGTC +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSASPIC*FVCLCV
Trigger: GACGCAGAGACAGACAAACAAACAGATAGGAGAGGC...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356736.5
CDS-3UTR CAA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTGCAGTTAAACACTGGTaGAAGTGCAGCTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: HGILKNRYFPKAPIYQASAVKHW*KCSWPG
Trigger: GCCTGGCCAGCTGCACTTCAACCAGTGTTTAACTGC...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCGCAGTTAAACACTGGTaGAAGTGCAGCTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSAVKHW*KCSWPG
Trigger: GCCTGGCCAGCTGCACTTCAACCAGTGTTTAACTGC...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCAGACTGACACTGAAAACGTGCTCATCCCTGCATaGAGTAGGATCACAAAGTCT +
Preference number: 5 (lower is better)
Translates to: RYFPKAPIYQASQTDTENVLIPA*SRITKS
Trigger: AGACTTTGTGATCCTACTCAATGCAGGGATGAGCAC...GTTTTCAGTGTCAGTCTGAGATGCCTGGTATATAGGAGCCTTTGGGAAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCAAACGCCCCAGGATTaGCGTACATATGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSQTPQD*RTYAPP
Trigger: GGGAGGAGCATATGTACGCAAATCCTGGGGCGTTTG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394833.6
CDS TCA 90 bp CTTCCTCCAGTCTCTTGTCGAAGTTCTCCATTTGGCTATACCCACTaGGGTCCATGTGGGTCAGTCTCGTATATATCCAAAGTAAATGAA +
Preference number: 5 (lower is better)
Translates to: LPPVSCRSSPFGYTH*GPCGSVSYISKVNE
Trigger: TTCATTTACTTTGGATATATACGAGACTGACCCACATGGACCTCAGTGGGTATAGCCAAATGGAGAACTTCGACAAGAGACTGGAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682549.1
CDS CCA 90 bp ATCCATATCCCCAAACTTCTGAATGACTTGGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGTGAAAGTTCAATTGCTGTAAGACTG +
Preference number: 5 (lower is better)
Translates to: IHIPKLLNDLVLFCA*ADPHMGESSIAVRL
Trigger: CAGTCTTACAGCAATTGAACTTTCACCCATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAGAAGTTTGGGGATATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000502903.1
ENST00000510255.5
ENST00000512657.5
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS-3UTR CAA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGTTTGGAGCGAAATTGTaGCCCACCAAAATGCCAAAA +
Preference number: 5 (lower is better)
Translates to: ANTWCTETEVLPALHTVLFGAKL*PTKMPK
Trigger: TTTTGGCATTTTGGTGGGCAACAATTTCGCTCCAAA...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GCAAACACATGGTGCACTGAAACCGAGGTGTTACCAGCTTTACATACTGTTCTGATATTTGGAGCGAAATaGTTGCCCACCAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: ANTWCTETEVLPALHTVLIFGAK*LPTKMP
Trigger: TGGCATTTTGGTGGGCAACAATTTCGCTCCAAATAT...CAGAACAGTATGTAAAGCTGGTAACACCTCGGTTTCAGTGCACCATGTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS CCA 90 bp ATCAAATCCAAATGCCTTCTGAATGACTTGGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGTGAAAGTTCAATTGCTGTAAGACTG +
Preference number: 5 (lower is better)
Translates to: IKSKCLLNDLVLFCA*ADPHMGESSIAVRL
Trigger: CAGTCTTACAGCAATTGAACTTTCACCCATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAGAAGGCATTTGGATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514000.5
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCTCCTATCTGTTTGTTaGTCTGTCTCTGCGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSLLSVC*SVSASF
Trigger: GAAAGACGCAGAGACAGACAAACAAACAGATAGGAG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356736.5
CDS-3UTR CAA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCACTGAATGACTTGGTCTaGTTTTGTGCTTGGGCCGAT +
Preference number: 5 (lower is better)
Translates to: FPLSLSVYMIIECMSLASLNDLV*FCAWAD
Trigger: ATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAG...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCCATGCAGAAAGGAAGTaGAATAGCAAGGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSHAERK*NSKACR
Trigger: TCGACAAGCCTTGCTATTCAACTTCCTTTCTGCATG...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCCTGAATGACTTGGTCTaGTTTTGTGCTTGGGCCGAT +
Preference number: 5 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSLNDLV*FCAWAD
Trigger: ATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAG...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCCTATTTCTGACAGTTaGGGCCCCTTCAAACAGGTA +
Preference number: 5 (lower is better)
Translates to: HGILKNRYFPKAPIYQASPISDS*GPFKQV
Trigger: TACCTGTTTGAAGGGGCCCAAACTGTCAGAAATAGG...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCTTTGGAGCGAAATTGTaGCCCACCAAAATGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSFGAKL*PTKMPK
Trigger: TTTTGGCATTTTGGTGGGCAACAATTTCGCTCCAAA...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTCCAGTTAATCTGTCCTaGATGTACAGCAGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HGILKNRYFPKAPIYQASPVNLS*MYSSPA
Trigger: AGCTGGACTGCTGTACATCAAGGACAGATTAACTGG...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp TCCAGCTTTTCGTGGAATCTGGTGAAGTTTATACTTAGCGATAAGCCTCTAAGCAAACTTCTGAATGACTaGGTCTTGTTTTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSFSWNLVKFILSDKPLSKLLND*VLFCAW
Trigger: CCAAGCACAAAACAAGACCAAGTCATTCAGAAGTTT...GCTTAGAGGCTTATCGCTAAGTATAAACTTCACCAGATTCCACGAAAAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCACCTATTTCTGACAGTTaGGGCCCCTTCAAACAGGTA +
Preference number: 5 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPPISDS*GPFKQV
Trigger: TACCTGTTTGAAGGGGCCCAAACTGTCAGAAATAGG...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCATGCAGAAAGGAAGTaGAATAGCAAGGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFHAERK*NSKACR
Trigger: TCGACAAGCCTTGCTATTCAACTTCCTTTCTGCATG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp AAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCCATATTTGGAGCGAAATaGTTGCCCACCAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: KEVFSEWLSITHKEHMFSIFGAK*LPTKMP
Trigger: TGGCATTTTGGTGGGCAACAATTTCGCTCCAAATAT...GGAAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS CCA 90 bp ACAGAAGTGCCAGCTATTGATAAATTGGAAATAAGGAAAACAAGCTaGGCCTTAGCCACAGATATTGTAAGAAGCTTTTCTGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TEVPAIDKLEIRKTS*ALATDIVRSFSVEK
Trigger: CTTCTCTACAGAAAAGCTTCTTACAATATCTGTGGCTAAGGCCCAGCTTGTTTTCCTTATTTCCAATTTATCAATAGCTGGCACTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682549.1
CDS-3UTR CAA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCATTCCTGAGATCATTGTaGGGCTTTGTCAATCATTTT +
Preference number: 5 (lower is better)
Translates to: FPLSLSVYMIIECMSLASFLRSL*GFVNHF
Trigger: AAAATGATTGACAAAGCCCAACAATGATCTCAGGAA...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp TTTCCCCTGAGTCTGAGTGTCTACATGATTATAGAATGCATGTCTCTTGCTTCATTCACCAAATCTGCATaGCTGCTACATGAAAACATT +
Preference number: 5 (lower is better)
Translates to: FPLSLSVYMIIECMSLASFTKSA*LLHENI
Trigger: AATGTTTTCATGTAGCAGCAATGCAGATTTGGTGAA...TGAAGCAAGAGACATGCATTCTATAATCATGTAGACACTCAGACTCAGGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS TCA 90 bp GTAATGAGTAGAATGGCTGTGAATCCAGTTAACATTCCAGCATTCTaGATCATGAAGAAGGTGAAATCGGTTTTTCTTCCAGTTACCTTT +
Preference number: 5 (lower is better)
Translates to: VMSRMAVNPVNIPAF*IMKKVKSVFLPVTF
Trigger: AAAGGTAACTGGAAGAAAAACCGATTTCACCTTCTTCATGATTCAGAATGCTGGAATGTTAACTGGATTCACAGCCATTCTACTCATTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000682227.1
ENST00000682243.1
ENST00000682932.1
ENST00000683173.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS-3UTR CAA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCAAAACTTCTGAATGACTaGGTCTTGTTTTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPKLLND*VLFCAW
Trigger: CCAAGCACAAAACAAGACCAAGTCATTCAGAAGTTT...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp GAAAATGTAATTCCTGAGATCATTGTTGGGCTTTGTCAATCATTTTCCTCACCACTTTCAGGATATAACTaGTATTTTCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: ENVIPEIIVGLCQSFSSPLSGYN*YFPLSL
Trigger: CAGACTCAGGGGAAAATACAAGTTATATCCTGAAAG...TGGTGAGGAAAATGATTGACAAAGCCCAACAATGATCTCAGGAATTACATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp CAAAGGAAGTCTTTTCTGAATGGCTCTCGATCACACATAAGGAACATATGTTTTCTTTCAGGATATAACTaGTATTTTCCCCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QRKSFLNGSRSHIRNICFLSGYN*YFPLSL
Trigger: CAGACTCAGGGGAAAATACAAGTTATATCCTGAAAG...AAAACATATGTTCCTTATGTGTGATCGAGAGCCATTCAGAAAAGACTTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS-3UTR CAA 90 bp CATGGAATACTGAAAAATAGGTATTTCCCAAAGGCTCCTATATACCAGGCATCTTTCCTGAGATCATTGTaGGGCTTTGTCAATCATTTT +
Preference number: 5 (lower is better)
Translates to: HGILKNRYFPKAPIYQASFLRSL*GFVNHF
Trigger: AAAATGATTGACAAAGCCCAACAATGATCTCAGGAA...AGATGCCTGGTATATAGGAGCCTTTGGGAAATACCTATTTTTCAGTATTCCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356736.5
ENST00000394833.6
CDS CCA 72 bp ACAGGAGCCCGGCCACCGCGCGACCCGGGGCCATCCTaGCCTGGGCTTCCCCTTGAGGGCCCGCGACGGGCT +
Preference number: 6 (lower is better)
Translates to: TGARPPRDPGPS*PGLPLEGPRRA
Trigger: AGCCCGTCGCGGGCCCTCAAGGGGAAGCCCAGGCCAGGATGGCCCCGGGTCGCGCGGTGGCCGGGCTCCTGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CAA 72 bp CCGCGCAGAGGGACGCGCGCGGGCGCACTGGCGTCCTaGCCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PRRGTRAGALAS*PKGGSVSARRC
Trigger: GCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGCCCGCGCGCGTCCCTCTGCGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CAA 90 bp GACGGGCTGCCGCGCAGAGGGACGCGCGCGGGCGCACTGGCGTCCTaGCCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTGCTCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: DGLPRRGTRAGALAS*PKGGSVSARRCSES
Trigger: TGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGCCCGCGCGCGTCCCTCTGCGCGGCAGCCCGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 72 bp CGCGCAGAGGGACGCGCGCGGGCGCACTGGCGTCCTTaGCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: RAEGRARAHWRP*PRAGASVLGAA
Trigger: AGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCGCCCGCGCGCGTCCCTCTGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 72 bp GGCTCCGGGACGCCCACGCGGGAGGCGGCTCCCATCTaGTCCAGCAAGTGCTGGAGCTGCGCCGCCGACAGG +
Preference number: 6 (lower is better)
Translates to: GSGTPTREAAPI*SSKCWSCAADR
Trigger: CCTGTCGGCGGCGCAGCTCCAGCACTTGCTGGAGCAGATGGGAGCCGCCTCCCGCGTGGGCGTCCCGGAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 72 bp TCCTTGCCCAAGGGCGGGAGCGTCAGTGCTCGGCGCTaGTCCGAGTCAGAGGTGGCGCGGGACGCCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SLPKGGSVSARR*SESEVARDAPG
Trigger: ACCAGGGGCGTCCCGCGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 72 bp CGCACTGGCGTCCTTGCCCAAGGGCGGGAGCGTCAGTaGTCGGCGCTGCTCCGAGTCAGAGGTGGCGCGGGA +
Preference number: 6 (lower is better)
Translates to: RTGVLAQGRERQ*SALLRVRGGAG
Trigger: TCCCGCGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGACGCTCCCGCCCTTGGGCAAGGACGCCAGTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp GGAGCGTCAGTGCTCGGCGCTGCTCCGAGTCAGAGGTaGCGCGGGACGCCCCTGGTTCTCCGACGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: GASVLGAAPSQR*RGTPLVLRRLR
Trigger: TCGAAGGCGTCGGAGAACCAGGGGCGTCCCGCGCCACCTCTGACTCGGAGCAGCGCCGAGCACTGACGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp CTGCGTGGCAGTAGCCCTCAAACGCCCGGCCGGGCATaGGGCCAGACGCCCCGGATCCGGGTTTGCAAACGC +
Preference number: 6 (lower is better)
Translates to: LRGSSPQTPGRA*GQTPRIRVCKR
Trigger: GCGTTTGCAAACCCGGATCCGGGGCGTCTGGCCCCATGCCCGGCCGGGCGTTTGAGGGCTACTGCCACGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394833.6
ENST00000683916.1
CDS TCA 72 bp CTTCGAAAGAACAGCAGCTCGCGACCTGCGGGGCATTaGAGTGGCAGCGTAGCCGAGGGGAGCGATAGGCGG +
Preference number: 6 (lower is better)
Translates to: LRKNSSSRPAGH*SGSVAEGSDRR
Trigger: CCGCCTATCGCTCCCCTCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCGCGAGCTGCTGTTCTTTCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS GCA 72 bp TCTCCGACGCCTTCGAAAGAACAGCAGCTCGCGACCTaGGGGGCATTGAAGTGGCAGCGTAGCCGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: SPTPSKEQQLAT*GALKWQRSRGE
Trigger: CTCCCCTCGGCTACGCTGCCACTTCAATGCCCCGCAGGTCGCGAGCTGCTGTTCTTTCGAAGGCGTCGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp TGCTTCCAGATTTGTTCTTCCTGGTTGAAGTGCAGCTaGCCAGGCTCCGGGACGCCCACGCGGGAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: CFQICSSWLKCS*PGSGTPTREAA
Trigger: AGCCGCCTCCCGCGTGGGCGTCCCGGAGCCTGGCCAGCTGCACTTCAACCAGGAAGAACAAATCTGGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000682243.1
ENST00000683173.1
ENST00000683634.1
CDS CCA 72 bp ATCTCTTCAGCAGTTAAACACTGGTTGAAGTGCAGCTaGCCAGGCTCCGGGACGCCCACGCGGGAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: ISSAVKHWLKCS*PGSGTPTREAA
Trigger: AGCCGCCTCCCGCGTGGGCGTCCCGGAGCCTGGCCAGCTGCACTTCAACCAGTGTTTAACTGCTGAAGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000682227.1
ENST00000682549.1
ENST00000682932.1
ENST00000683221.1
ENST00000683412.1
ENST00000683462.1
ENST00000683916.1
ENST00000684386.1
CDS CCA 72 bp CTTGATTCAGTATTCCCAAACTGGTTGAAGTGCAGCTaGCCAGGCTCCGGGACGCCCACGCGGGAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: LDSVFPNWLKCS*PGSGTPTREAA
Trigger: AGCCGCCTCCCGCGTGGGCGTCCCGGAGCCTGGCCAGCTGCACTTCAACCAGTTTGGGAATACTGAATCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683706.1
CDS TCA 72 bp TCTTTCTGTCTCCCGCCCCCACAACCTCTGTATCTCTaGCAGGTCCGCGGTGAAACTCCGCGATCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: SFCLPPPQPLYL*QVRGETPRSAP
Trigger: CGGAGCGGATCGCGGAGTTTCACCGCGGACCTGTCAGAGATACAGAGGTTGTGGGGGCGGGAGACAGAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424970.7
CDS TCA 72 bp TCCTGGAGAGCCTCTGTATCTCTGACAGGTCCGCGGTaGAACTCCGCGATCCGCTCCGGCGCTCTTTACAAA +
Preference number: 6 (lower is better)
Translates to: SWRASVSLTGPR*NSAIRSGALYK
Trigger: TTTGTAAAGAGCGCCGGAGCGGATCGCGGAGTTTCACCGCGGACCTGTCAGAGATACAGAGGCTCTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682932.1
CDS GCA 72 bp CTTTATTCTCTCCGCCGCAAACTTAGAAGTGAGACGTaGAGTCCCCAAGGAGCTGCAGAAAAGGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: LYSLRRKLRSET*SPQGAAEKGSS
Trigger: GGAAGAGCCCTTTTCTGCAGCTCCTTGGGGACTGCACGTCTCACTTCTAAGTTTGCGGCGGAGAGAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683916.1
CDS CCA 72 bp TCTTTCTCTCTGCGTGTCAACGTAAGACTCGGTCTCTaGATCTCTCTCTCTTTCTGTCTCCCGCCCCCACAA +
Preference number: 6 (lower is better)
Translates to: SFSLRVNVRLGL*ISLSFCLPPPQ
Trigger: TTGTGGGGGCGGGAGACAGAAAGAGAGAGAGATCCAGAGACCGAGTCTTACGTTGACACGCAGAGAGAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000356736.5
ENST00000424970.7
ENST00000512657.5
ENST00000682243.1
ENST00000682549.1
ENST00000683173.1
ENST00000683462.1
ENST00000683634.1
ENST00000683706.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp TTCACTTCCTCCAGTCTCTTGTCGAAGTTCTCCATTTaGCTATACCCACTGAGGTCCATGTGGGTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: FTSSSLLSKFSI*LYPLRSMWVSL
Trigger: GAGACTGACCCACATGGACCTCAGTGGGTATAGCCAAATGGAGAACTTCGACAAGAGACTGGAGGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682549.1
CDS TCA 72 bp GGTCTTGTTTTGTGCTTGGGCCGATCCTCACATGGGTaGAAGTTCAATTGCTGTAAGACTGCTGGACAGATG +
Preference number: 6 (lower is better)
Translates to: GLVLCLGRSSHG*KFNCCKTAGQM
Trigger: CATCTGTCCAGCAGTCTTACAGCAATTGAACTTTCACCCATGTGAGGATCGGCCCAAGCACAAAACAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000502903.1
ENST00000510255.5
ENST00000512657.5
ENST00000514000.5
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683916.1
ENST00000684386.1
CDS TCA 72 bp AATAACGCCAAGTCTTTGATGCAGCATGGGGTAAGCTaGACAGCAGGCATGAATAATTCTCCACGAGAGTAC +
Preference number: 6 (lower is better)
Translates to: NNAKSLMQHGVS*TAGMNNSPREY
Trigger: GTACTCTCGTGGAGAATTATTCATGCCTGCTGTTCAGCTTACCCCATGCTGCATCAAAGACTTGGCGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510255.5
CDS TCA 72 bp GTCTCTTGTCGAAGTTCTCCATTTGGCTATACCCACTaGGGTCCATGTGGGTCAGTCTCGTATATATCCAAA +
Preference number: 6 (lower is better)
Translates to: VSCRSSPFGYTH*GPCGSVSYISK
Trigger: TTTGGATATATACGAGACTGACCCACATGGACCTCAGTGGGTATAGCCAAATGGAGAACTTCGACAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682549.1
CDS CCA 72 bp CCCAAACTTCTGAATGACTTGGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGTGAAAGTTCAATTGCT +
Preference number: 6 (lower is better)
Translates to: PKLLNDLVLFCA*ADPHMGESSIA
Trigger: AGCAATTGAACTTTCACCCATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAGAAGTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000502903.1
ENST00000510255.5
ENST00000512657.5
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CAA 72 bp ACGCATGCATCTTTTCGTGATCTTGATGAAACCAACTaGCTGAAATGGAGCCTGGAGACCCTTGCATTGTCT +
Preference number: 6 (lower is better)
Translates to: THASFRDLDETN*LKWSLETLALS
Trigger: AGACAATGCAAGGGTCTCCAGGCTCCATTTCAGCAAGTTGGTTTCATCAAGATCACGAAAAGATGCATGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683401.1
CDS CCA 72 bp AAATGCCTTCTGAATGACTTGGTCTTGTTTTGTGCTTaGGCCGATCCTCACATGGGTGAAAGTTCAATTGCT +
Preference number: 6 (lower is better)
Translates to: KCLLNDLVLFCA*ADPHMGESSIA
Trigger: AGCAATTGAACTTTCACCCATGTGAGGATCGGCCCAAGCACAAAACAAGACCAAGTCATTCAGAAGGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514000.5
CDS TCA 72 bp ACTGTTGAAGGTGCTGGTATTGCAGAGATGTGGAGGTaGAATACTCCAGATAATGAAATTACTACCTTGCCG +
Preference number: 6 (lower is better)
Translates to: TVEGAGIAEMWR*NTPDNEITTLP
Trigger: CGGCAAGGTAGTAATTTCATTATCTGGAGTATTTCACCTCCACATCTCTGCAATACCAGCACCTTCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.7
CDS CAA 90 bp TGTCATATGCCAACCTCTAACCAATCACTGTTGAAGGTGCTGGTATaGCAGAGATGTGGAGGTGAAATACTCCAGATAATGAAATTACTA +
Preference number: 6 (lower is better)
Translates to: CHMPTSNQSLLKVLV*QRCGGEILQIMKLL
Trigger: TAGTAATTTCATTATCTGGAGTATTTCACCTCCACATCTCTGCAATACCAGCACCTTCAACAGTGATTGGTTAGAGGTTGGCATATGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424970.7
CDS CCA 72 bp GAACGCTGTAGAGATACCACACTGACATTATCAAAATaGATATGTCCATTAGCTTCTGTGACAGCAGGATTT +
Preference number: 6 (lower is better)
Translates to: ERCRDTTLTLSK*ICPLASVTAGF
Trigger: AAATCCTGCTGTCACAGAAGCTAATGGACATATCCATTTTGATAATGTCAGTGTGGTATCTCTACAGCGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512337.1
CDS TCA 72 bp AGAATGGCTGTGAATCCAGTTAACATTCCAGCATTCTaGATCATGAAGAAGGTGAAATCGGTTTTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RMAVNPVNIPAF*IMKKVKSVFLP
Trigger: TGGAAGAAAAACCGATTTCACCTTCTTCATGATTCAGAATGCTGGAATGTTAACTGGATTCACAGCCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000682227.1
ENST00000682243.1
ENST00000682932.1
ENST00000683173.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683706.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp CCAAACTGTAGAGATACCACACTGACATTATCAAAATaGATATGTCCATTAGCTTCTGTGACAGCAGGATTT +
Preference number: 6 (lower is better)
Translates to: PNCRDTTLTLSK*ICPLASVTAGF
Trigger: AAATCCTGCTGTCACAGAAGCTAATGGACATATCCATTTTGATAATGTCAGTGTGGTATCTCTACAGTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424970.7
ENST00000682243.1
ENST00000682549.1
ENST00000683462.1
ENST00000683916.1
ENST00000684386.1
CDS CCA 72 bp GGTCAAAATCTTTGGGAAATAAGATTTCTTTATCAGTaGAGTCAAAATCAATCCGAGGAGAGATGCCAGATT +
Preference number: 6 (lower is better)
Translates to: GQNLWEIRFLYQ*SQNQSEERCQI
Trigger: AATCTGGCATCTCTCCTCGGATTGATTTTGACTCCACTGATAAAGAAATCTTATTTCCCAAAGATTTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000356736.5
ENST00000394833.6
ENST00000424970.7
ENST00000510255.5
ENST00000512657.5
ENST00000682227.1
ENST00000682243.1
ENST00000682549.1
ENST00000682932.1
ENST00000683173.1
ENST00000683221.1
ENST00000683401.1
ENST00000683412.1
ENST00000683462.1
ENST00000683634.1
ENST00000683916.1
ENST00000684289.1
ENST00000684386.1
CDS CCA 72 bp CCAGCTATTGATAAATTGGAAATAAGGAAAACAAGCTaGGCCTTAGCCACAGATATTGTAAGAAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: PAIDKLEIRKTS*ALATDIVRSFS
Trigger: AGAAAAGCTTCTTACAATATCTGTGGCTAAGGCCCAGCTTGTTTTCCTTATTTCCAATTTATCAATAGCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682549.1