RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000147804, ENSG00000285243

Ensembl transcript IDs: ENST00000276833.9, ENST00000301305.8, ENST00000526658.1, ENST00000527148.5, ENST00000529462.5, ENST00000530807.5, ENST00000531013.1, ENST00000531789.1, ENST00000532718.5, ENST00000642871.1, ENST00000643027.1, ENST00000643303.1, ENST00000643598.1, ENST00000644497.1, ENST00000644877.1, ENST00000645411.3, ENST00000645427.1, ENST00000646333.1

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCTaGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAA +
Preference number: 1 (lower is better)
Translates to: ECLYWSWDWGLYRGF*FLGCRFVRCGILSQ
Trigger: TTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
3UTR CCA 72 bp TACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCTaGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATC +
Preference number: 3 (lower is better)
Translates to: YWSWDWGLYRGF*FLGCRFVRCGI
Trigger: GATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGACGGCGGCGGCACTaGGGCGGGCGACGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAGRRRH*GGRRTW
Trigger: CCAGGTACGTCGCCCGCCTCAGTGCCGCCGCCGTCC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGGACGGCGGCGGCACTaGGGCGGGCGACGTACCTGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRGRRRH*GGRRTW
Trigger: CCAGGTACGTCGCCCGCCTCAGTGCCGCCGCCGTCC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGGACGGCGGCGGCACTaGGGCGGGCGACGTACCTGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGGRRRH*GGRRTW
Trigger: CCAGGTACGTCGCCCGCCTCAGTGCCGCCGCCGTCC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCTCCGCCACCAGGTCTaGGCGGGAGCCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGALRHQV*AGALVG
Trigger: CCCCACGAGGGCTCCCGCGCAGACCTGGTGGCGGAG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCTCCGCCACCAGGTCTaGGCGGGAGCCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRLRHQV*AGALVG
Trigger: CCCCACGAGGGCTCCCGCGCAGACCTGGTGGCGGAG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGGACGGCGGCGGCACTaGGGCGGGCGACGTACCTGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRGRRRH*GGRRTW
Trigger: CCAGGTACGTCGCCCGCCTCAGTGCCGCCGCCGTCC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTGCCCTCGGGGTTGCTaGGGTACAGGACGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGACPRGC*GTGRRR
Trigger: CCGCCGCCGTCCTGTACCTCAGCAACCCCGAGGGCA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTGCCCTCGGGGTTGCTaGGGTACAGGACGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRCPRGC*GTGRRR
Trigger: CCGCCGCCGTCCTGTACCTCAGCAACCCCGAGGGCA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRPRGYG*CGRRAR
Trigger: ACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGPRGYG*CGRRAR
Trigger: ACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAWPPWL*LLWPQG
Trigger: GCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRWPPWL*LLWPQG
Trigger: GCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCCGCCCAGAGCCTCTTaGTCCAGAGCGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGPPRAS*SRAPWP
Trigger: TGGCCAGGGCGCTCTGGATCAAGAGGCTCTGGGCGG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGACCAGCGAAGGCCGTaGGCGCGGAGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGADQRRP*ARRPGS
Trigger: TGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGTGGGCAGAGACAAGTaGGCAGGGGCGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAVGRDK*AGALGP
Trigger: TGGGCCCAGCGCCCCTGCTCACTTGTCTCTGCCCAC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGGCCCGTTGGCGCAGTaGACACGGTCCGCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGGPLAQ*TRSASV
Trigger: TACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCGGAGCTCGCTGGGTaGCAGCTGCAGGGACACACC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPELAG*QLQGHT
Trigger: GGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCCGGAGCTCGCTGGGTaGCAGCTGCAGGGACACACC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAPELAG*QLQGHT
Trigger: GGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATDSPA*SKAAKS
Trigger: GGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRTDSPA*SKAAKS
Trigger: GGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGT...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAQAGGH*QDPGLA
Trigger: AGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGAPGGL*AEALFA
Trigger: AGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRAPGGL*AEALFA
Trigger: AGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAAPGGL*AEALFA
Trigger: AGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTGGCTATGGCTGCTGTaGCCGCAGGGCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRWLWLL*PQGPSS
Trigger: GGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTGGCTATGGCTGCTGTaGCCGCAGGGCCCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAWLWLL*PQGPSS
Trigger: GGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAWLWPP*LWLLWP
Trigger: CGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACACGGCCAGCGAGGTaGCCAGCCCGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATRPAR*PARSSR
Trigger: CCTGGAAGACCGGGCTGGCCACCTCGCTGGCCGTGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGTGGGCTCTGGCCTGTaGGGAGGGTCAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAVGSGL*GGSGCP
Trigger: TGGGCACCCTGACCCTCCCCACAGGCCAGAGCCCAC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGTGGGCTCTGGCCTGTaGGGAGGGTCAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAVGSGL*GGSGCP
Trigger: TGGGCACCCTGACCCTCCCCACAGGCCAGAGCCCAC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGCCCTCGGGGTTGCTaGGGTACAGGACGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRCPRGC*GTGRRR
Trigger: CCGCCGCCGTCCTGTACCTCAGCAACCCCGAGGGCA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGAGGAGGTGGTCTGCATaGGAGGCCCAGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGRRWSA*EAQRPA
Trigger: GGCTGGCCTCTGGGCCTCTCATGCAGACCACCTCCT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGCTCCCCTGTGCCGATaGCTGTGGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAAPLCR*LWSLWA
Trigger: GGCCCACAGTGACCACAGTCATCGGCACAGGGGAGC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCTCCCCTGTGCCGATaGCTGTGGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRAPLCR*LWSLWA
Trigger: GGCCCACAGTGACCACAGTCATCGGCACAGGGGAGC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACCTCTCTGACTGGCTaGGCTGGTCCTGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATSLTG*AGPGRG
Trigger: CCCCCGTCCAGGACCAGCTCAGCCAGTCAGAGAGGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTACCTCTCTGACTGGCTaGGCTGGTCCTGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGATSLTG*AGPGRG
Trigger: CCCCCGTCCAGGACCAGCTCAGCCAGTCAGAGAGGT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGAGGTGGGCTGTGGGCTaGGGCCCTCTTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGRWAVG*GPLRCV
Trigger: CACACAGCGAAGAGGGCCTCAGCCCACAGCCCACCT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGAGGTGGGCTGTGGGCTaGGGCCCTCTTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRRWAVG*GPLRCV
Trigger: CACACAGCGAAGAGGGCCTCAGCCCACAGCCCACCT...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTAGGTGGGCTGTGGGCTaGGGCCCTCTTCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGARWAVG*GPLRCV
Trigger: CACACAGCGAAGAGGGCCTCAGCCCACAGCCCACCT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGACCAGCGAAGGCCGTaGGCGCGGAGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGDQRRP*ARRPGS
Trigger: TGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCCTCGCTCTCCTCGCTaGCTCCAACCGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRPRSPR*LQPRVP
Trigger: TGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCCTCGCTCTCCTCGCTaGCTCCAACCGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAPRSPR*LQPRVP
Trigger: TGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCCCACCCCCAGGCGCTaGATCAAGGCTGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAPTPRR*IKADSS
Trigger: CGAGCTGTCAGCCTTGATGCAGCGCCTGGGGGTGGG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRPRGYG*CGRRAR
Trigger: ACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTCGCTGGGTGCCAGCTaGAGGGACACACCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRSLGAS*RDTPWL
Trigger: CAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCGCTGGGTGCCAGCTaGAGGGACACACCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGASLGAS*RDTPWL
Trigger: CAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCCGGAGCTCGCTGGGTaGCAGCTGCAGGGACACACC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGPELAG*QLQGHT
Trigger: GGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCTCCGCCACCAGGTCTaGGCGGGAGCCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWLRHQV*AGALVG
Trigger: CCCCACGAGGGCTCCCGCGCAGACCTGGTGGCGGAG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCCGTCGGCGAAGTTGTaGACGGCGTCGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAPSAKL*TASPRV
Trigger: CACTCTGGGCGACGCCGTGCACAACTTCGCCGACGG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCGTCGGCGAAGTTGTaGACGGCGTCGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPSAKL*TASPRV
Trigger: CACTCTGGGCGACGCCGTGCACAACTTCGCCGACGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGTDSPA*SKAAKS
Trigger: GGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGT...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGQAGGH*QDPGLA
Trigger: AGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATTCCACACGGCCCGTTaGCGCAGTGCACACGGTCCG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAFHTAR*RSAHGP
Trigger: CGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTTCCACACGGCCCGTTaGCGCAGTGCACACGGTCCG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGFHTAR*RSAHGP
Trigger: CGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGACCCGCTCCTGACATaGTCCAGCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGADPLLT*SSRAAR
Trigger: CCTGGCTGCCCTGCTGGACCATGTCAGGAGCGGGTC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGGGCTCGGCAAGGCGTaGAAGCAAGACCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGGLGKA*KQDPLL
Trigger: CAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGGGCTCGGCAAGGCGTaGAAGCAAGACCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRGLGKA*KQDPLL
Trigger: CAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGGGCTCGGCAAGGCGTaGAAGCAAGACCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAGLGKA*KQDPLL
Trigger: CAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRWPPWL*LLWPQG
Trigger: GCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGWLWPP*LWLLWP
Trigger: CGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGDTPWL*PPWLWL
Trigger: CAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRADTPWL*PPWLWL
Trigger: CAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRDTPWL*PPWLWL
Trigger: CAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRFSSSA*RTDSPA
Trigger: CGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGFSSSA*RTDSPA
Trigger: CGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGCCTCCTCCAGCAGCTaGGGGATATCTACGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAASSSS*GISTQA
Trigger: GGCCTGCGTAGATATCCCTCAGCTGCTGGAGGAGGC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCCTCCTCCAGCAGCTaGGGGATATCTACGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRASSSS*GISTQA
Trigger: GGCCTGCGTAGATATCCCTCAGCTGCTGGAGGAGGC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGCCTCCTCCAGCAGCTaGGGGATATCTACGCAGGCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGASSSS*GISTQA
Trigger: GGCCTGCGTAGATATCCCTCAGCTGCTGGAGGAGGC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGAGCAAGACCCGCTCCTaGCATGGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGSKTRS*HGPAGQ
Trigger: CTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTAGCAAGACCCGCTCCTaGCATGGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGASKTRS*HGPAGQ
Trigger: CTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGCGCTGCATCAAGGCTaGCAGCTCGGCCAGCGTCAT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAALHQG*QLGQRH
Trigger: ATGACGCTGGCCGAGCTGTCAGCCTTGATGCAGCGC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGCTCCCCTGTGCCGATaGCTGTGGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGAPLCR*LWSLWA
Trigger: GGCCCACAGTGACCACAGTCATCGGCACAGGGGAGC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACCTCTCTGACTGGCTaGGCTGGTCCTGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGTSLTG*AGPGRG
Trigger: CCCCCGTCCAGGACCAGCTCAGCCAGTCAGAGAGGT...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGACCAGCGAAGGCCGTaGGCGCGGAGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRDQRRP*ARRPGS
Trigger: TGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGAGCCACTGCCAATTTaGTGGCAGAGGGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAEPLPI*WQRAGR
Trigger: CCTGCCGGCCCTCTGCCATCAAATTGGCAGTGGCTC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTGCTTCTGGGCTGGCTaGGGGCGGCTTTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGCFWAG*GRLCWG
Trigger: ACCCCAGCAAAGCCGCCCTCAGCCAGCCCAGAAGCA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCAGGCTCCACTCAGCTaGTGTTGGAGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRQAPLS*CWSRAG
Trigger: CCCTGCCCTGCTCCAACAGCAGCTGAGTGGAGCCTG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCAGGCTCCACTCAGCTaGTGTTGGAGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGQAPLS*CWSRAG
Trigger: CCCTGCCCTGCTCCAACAGCAGCTGAGTGGAGCCTG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGCCTGGACTGGGAGGTaGAGGCTCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAAWTGR*RLHSAA
Trigger: AGCAGCTGAGTGGAGCCTGCACCTCCCAGTCCAGGC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGCCTGGACTGGGAGGTaGAGGCTCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAAWTGR*RLHSAA
Trigger: AGCAGCTGAGTGGAGCCTGCACCTCCCAGTCCAGGC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGCCTGGACTGGGAGGTaGAGGCTCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGAWTGR*RLHSAA
Trigger: AGCAGCTGAGTGGAGCCTGCACCTCCCAGTCCAGGC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWPRGYG*CGRRAR
Trigger: ACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCCGGAGCTCGCTGGGTaGCAGCTGCAGGGACACACC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRPELAG*QLQGHT
Trigger: GGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCCGTCGGCGAAGTTGTaGACGGCGTCGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGPSAKL*TASPRV
Trigger: CACTCTGGGCGACGCCGTGCACAACTTCGCCGACGG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAQVQQQ*LAHGQP
Trigger: GGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGQVQQQ*LAHGQP
Trigger: GGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAQVQQQ*LAHGQP
Trigger: GGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTGGGGAGGGTCAGGGTaGCCAGGTACTGCCACTAGC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGWGGSG*PGTATS
Trigger: GCTAGTGGCAGTACCTGGGCACCCTGACCCTCCCCA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATGGGGAGGGTCAGGGTaGCCAGGTACTGCCACTAGC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAWGGSG*PGTATS
Trigger: GCTAGTGGCAGTACCTGGGCACCCTGACCCTCCCCA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGCAGCCCCAGCACCTTaGGCGTCAGATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGAAPAP*ASDAGQ
Trigger: CTGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGCAGCCCCAGCACCTTaGGCGTCAGATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAAAPAP*ASDAGQ
Trigger: CTGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRAPGGL*AEALFA
Trigger: AGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWWPPWL*LLWPQG
Trigger: GCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRWLWPP*LWLLWP
Trigger: CGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGDTPWL*PPWLWL
Trigger: CAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGACACGGCCAGCGAGGTaGCCAGCCCGGTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRTRPAR*PARSSR
Trigger: CCTGGAAGACCGGGCTGGCCACCTCGCTGGCCGTGT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAAGAGGAACAGGCCGGTaGCCACTGCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRARGTGR*PLPGSR
Trigger: CCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCCTCTCTCAACCCCTaGCGCCCTTCCGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGASSLNP*RPSVSP
Trigger: TGGGGAGACGGAAGGGCGCCAGGGGTTGAGAGAGGA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCAGTGCTTCTGGGCTaGCTGAGGGCGGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPVLLG*LRAALL
Trigger: CAGCAAAGCCGCCCTCAGCCAGCCCAGAAGCACTGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGAGGAGGTGGTCTGCATaGGAGGCCCAGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRRRWSA*EAQRPA
Trigger: GGCTGGCCTCTGGGCCTCTCATGCAGACCACCTCCT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRKSTKY*GLGKAW
Trigger: CCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTT...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAKSTKY*GLGKAW
Trigger: CCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGCGCTGCATCAAGGCTaGCAGCTCGGCCAGCGTCAT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGALHQG*QLGQRH
Trigger: ATGACGCTGGCCGAGCTGTCAGCCTTGATGCAGCGC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGCTCCCCTGTGCCGATaGCTGTGGTCACTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRAPLCR*LWSLWA
Trigger: GGCCCACAGTGACCACAGTCATCGGCACAGGGGAGC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRARRRPE*SYRAVA
Trigger: GGCTACTGCCCTATATGATCACTCTGGGCGACGCCG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGRRRPE*SYRAVA
Trigger: GGCTACTGCCCTATATGATCACTCTGGGCGACGCCG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGARRRPE*SYRAVA
Trigger: GGCTACTGCCCTATATGATCACTCTGGGCGACGCCG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGACCAGCGAAGGCCGTaGGCGCGGAGGCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWDQRRP*ARRPGS
Trigger: TGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCCTCGCTCTCCTCGCTaGCTCCAACCGCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRPRSPR*LQPRVP
Trigger: TGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGAGCCACTGCCAATTTaGTGGCAGAGGGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGEPLPI*WQRAGR
Trigger: CCTGCCGGCCCTCTGCCATCAAATTGGCAGTGGCTC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGTGGGCAGAGACAAGTaGGCAGGGGCGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWVGRDK*AGALGP
Trigger: TGGGCCCAGCGCCCCTGCTCACTTGTCTCTGCCCAC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGTGCTCAGTGGGTGTTaGTGTGGCCAAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAVLSGC*CGQGPV
Trigger: CACTGGGCCTTGGCCACAGCAACACCCACTGAGCAC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGCCCGTTGGCGCAGTaGACACGGTCCGCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWGPLAQ*TRSASV
Trigger: TACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCCCACCCCCAGGCGCTaGATCAAGGCTGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRPTPRR*IKADSS
Trigger: CGAGCTGTCAGCCTTGATGCAGCGCCTGGGGGTGGG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGACCTTGGGCGTCAGATaGAGGACAGCGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGTLGVR*RTASPV
Trigger: CACTGGGGACGCTGTCCTGCATCTGACGCCCAAGGT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACCTTGGGCGTCAGATaGAGGACAGCGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATLGVR*RTASPV
Trigger: CACTGGGGACGCTGTCCTGCATCTGACGCCCAAGGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTCGCTGGGTGCCAGCTaGAGGGACACACCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRSLGAS*RDTPWL
Trigger: CAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWTDSPA*SKAAKS
Trigger: GGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGT...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWQAGGH*QDPGLA
Trigger: AGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCCCAGCGTGCTCAGTaGGTGTTGCTGTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGASQRAQ*VLLWPR
Trigger: CCTTGGCCACAGCAACACCCACTGAGCACGCTGGGA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGACCCGCTCCTGACATaGTCCAGCAGGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRDPLLT*SSRAAR
Trigger: CCTGGCTGCCCTGCTGGACCATGTCAGGAGCGGGTC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCCACTCAGCTGCTGTTaGAGCAGGGCAGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRPLSCC*SRAGLS
Trigger: ACTGAGCCCTGCCCTGCTCCAACAGCAGCTGAGTGG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCCACTCAGCTGCTGTTaGAGCAGGGCAGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGPLSCC*SRAGLS
Trigger: ACTGAGCCCTGCCCTGCTCCAACAGCAGCTGAGTGG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCACTCAGCTGCTGTTaGAGCAGGGCAGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPLSCC*SRAGLS
Trigger: ACTGAGCCCTGCCCTGCTCCAACAGCAGCTGAGTGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWWLWPP*LWLLWP
Trigger: CGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGCAGGGACACACCGTaGCTGTGGCCCCCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRCRDTP*LWPPWL
Trigger: TAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCTGGGCTCAGTCTCCTaGGCTCAGGGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRLGSVS*AQGSAA
Trigger: AGCTGCTGAACCCTGAGCCCAGGAGACTGAGCCCAG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTCGTGTGGCAACTCGTaGCAGAACACGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGSCGNS*QNTASE
Trigger: CTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGTCCCCCAGCTCGTGTaGCAACTCGTGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRVPQLV*QLVAEH
Trigger: GTGTTCTGCCACGAGTTGCCACACGAGCTGGGGGAC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRFSSSA*RTDSPA
Trigger: CGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGAGAGGAACAGGCCGGTaGCCACTGCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGRGTGR*PLPGSR
Trigger: CCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCT...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGAGGGACTGTGTCCCTaGAAAGGCCTGTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAEGLCP*KGLSAL
Trigger: GAGGGCAGACAGGCCTTTCCAGGGACACAGTCCCTC...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGAGGGACTGTGTCCCTaGAAAGGCCTGTCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAEGLCP*KGLSAL
Trigger: GAGGGCAGACAGGCCTTTCCAGGGACACAGTCCCTC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGAGGAGGTGGTCTGCATaGGAGGCCCAGAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWRRWSA*EAQRPA
Trigger: GGCTGGCCTCTGGGCCTCTCATGCAGACCACCTCCT...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGAGCAAGACCCGCTCCTaGCATGGTCCAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRSKTRS*HGPAGQ
Trigger: CTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGCGCTGCATCAAGGCTaGCAGCTCGGCCAGCGTCAT +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRALHQG*QLGQRH
Trigger: ATGACGCTGGCCGAGCTGTCAGCCTTGATGCAGCGC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACTCAGCTCCCAGCGTaGTCAGTGGGTGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATQLPA*SVGVAV
Trigger: CACAGCAACACCCACTGAGCACGCTGGGAGCTGAGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGACTCAGCTCCCAGCGTaGTCAGTGGGTGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRTQLPA*SVGVAV
Trigger: CACAGCAACACCCACTGAGCACGCTGGGAGCTGAGT...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGGGACCTCGCTGCTGTaGTGCTGGAACACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGGTSLL*CWNTKS
Trigger: GGACTTTGTGTTCCAGCAGCACAGCAGCGAGGTCCC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCCCACCCCCAGGCGCTaGATCAAGGCTGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWPTPRR*IKADSS
Trigger: CGAGCTGTCAGCCTTGATGCAGCGCCTGGGGGTGGG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCAGGCTCCACTCAGCTaGTGTTGGAGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRQAPLS*CWSRAG
Trigger: CCCTGCCCTGCTCCAACAGCAGCTGAGTGGAGCCTG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACCTTGGGCGTCAGATaGAGGACAGCGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGTLGVR*RTASPV
Trigger: CACTGGGGACGCTGTCCTGCATCTGACGCCCAAGGT...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATCTTCGCTGTGTGTATaGAGCCCCAGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRASSLCV*SPSTLG
Trigger: GCCCAAGGTGCTGGGGCTGCATACACACAGCGAAGA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTCTTCGCTGTGTGTATaGAGCCCCAGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGASSLCV*SPSTLG
Trigger: GCCCAAGGTGCTGGGGCTGCATACACACAGCGAAGA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTCTTCGCTGTGTGTATaGAGCCCCAGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGSSLCV*SPSTLG
Trigger: GCCCAAGGTGCTGGGGCTGCATACACACAGCGAAGA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTCGCTGGGTGCCAGCTaGAGGGACACACCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWSLGAS*RDTPWL
Trigger: CAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCCGTCGGCGAAGTTGTaGACGGCGTCGCCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWPSAKL*TASPRV
Trigger: CACTCTGGGCGACGCCGTGCACAACTTCGCCGACGG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRQVQQQ*LAHGQP
Trigger: GGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGACTCCAACCGCGAGTaGCACGTAGAGACCAGCGAA +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGADSNRE*HVETSE
Trigger: TTCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGACTCCAACCGCGAGTaGCACGTAGAGACCAGCGAA +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRDSNRE*HVETSE
Trigger: TTCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCTCCCCTGGAGCCACTaGCAATTTGATGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGALPWSH*QFDGRG
Trigger: CCCTCTGCCATCAAATTGGCAGTGGCTCCAGGGGAG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCAGCCATCACGTCCCTaGCACTCAGGCATACCGTGT +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGQPSRP*HSGIPC
Trigger: ACACGGTATGCCTGAGTGCCAGGGACGTGATGGCTG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACAGCCATCACGTCCCTaGCACTCAGGCATACCGTGT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAQPSRP*HSGIPC
Trigger: ACACGGTATGCCTGAGTGCCAGGGACGTGATGGCTG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCCACTCAGCTGCTGTTaGAGCAGGGCAGGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGPLSCC*SRAGLS
Trigger: ACTGAGCCCTGCCCTGCTCCAACAGCAGCTGAGTGG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGCAGGGACACACCGTaGCTGTGGCCCCCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWCRDTP*LWPPWL
Trigger: TAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCTGGGCTCAGTCTCCTaGGCTCAGGGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGLGSVS*AQGSAA
Trigger: AGCTGCTGAACCCTGAGCCCAGGAGACTGAGCCCAG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTCGTGTGGCAACTCGTaGCAGAACACGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGSCGNS*QNTASE
Trigger: CTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGTCCCCCAGCTCGTGTaGCAACTCGTGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGVPQLV*QLVAEH
Trigger: GTGTTCTGCCACGAGTTGCCACACGAGCTGGGGGAC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGAGAGGAACAGGCCGGTaGCCACTGCCAGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRRGTGR*PLPGSR
Trigger: CCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCCCAGGGGACTCCCCTaGAGCCACTGCCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAPRGLP*SHCQFD
Trigger: ATCAAATTGGCAGTGGCTCCAGGGGAGTCCCCTGGG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCCAGGGGACTCCCCTaGAGCCACTGCCAATTTGAT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPRGLP*SHCQFD
Trigger: ATCAAATTGGCAGTGGCTCCAGGGGAGTCCCCTGGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRKSTKY*GLGKAW
Trigger: CCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGCGCTGCATCAAGGCTaGCAGCTCGGCCAGCGTCAT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWALHQG*QLGQRH
Trigger: ATGACGCTGGCCGAGCTGTCAGCCTTGATGCAGCGC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGTACAGATACCTCTCTaGCTGGCTGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAVQIPL*LAELVL
Trigger: CAGGACCAGCTCAGCCAGTCAGAGAGGTATCTGTAC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGTACAGATACCTCTCTaGCTGGCTGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRVQIPL*LAELVL
Trigger: CAGGACCAGCTCAGCCAGTCAGAGAGGTATCTGTAC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGACCTCGCTGCTGTGCTaGTGGAACACAAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGTSLLC*WNTKST
Trigger: CGTGGACTTTGTGTTCCAGCAGCACAGCAGCGAGGT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAACCTCGCTGCTGTGCTaGTGGAACACAAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRATSLLC*WNTKST
Trigger: CGTGGACTTTGTGTTCCAGCAGCACAGCAGCGAGGT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTACCTCGCTGCTGTGCTaGTGGAACACAAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGATSLLC*WNTKST
Trigger: CGTGGACTTTGTGTTCCAGCAGCACAGCAGCGAGGT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGGGACCTCGCTGCTGTaGTGCTGGAACACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGGTSLL*CWNTKS
Trigger: GGACTTTGTGTTCCAGCAGCACAGCAGCGAGGTCCC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTTCCGACAGTCCATATaGAGCCATCACGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAFRQSI*SHHVPG
Trigger: GCCAGGGACGTGATGGCTGCATATGGACTGTCGGAA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTTCCGACAGTCCATATaGAGCCATCACGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRFRQSI*SHHVPG
Trigger: GCCAGGGACGTGATGGCTGCATATGGACTGTCGGAA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCAGGCTCCACTCAGCTaGTGTTGGAGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWQAPLS*CWSRAG
Trigger: CCCTGCCCTGCTCCAACAGCAGCTGAGTGGAGCCTG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGCCTGGACTGGGAGGTaGAGGCTCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWAWTGR*RLHSAA
Trigger: AGCAGCTGAGTGGAGCCTGCACCTCCCAGTCCAGGC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTCTTCGCTGTGTGTATaGAGCCCCAGCACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGSSLCV*SPSTLG
Trigger: GCCCAAGGTGCTGGGGCTGCATACACACAGCGAAGA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTGAGCATGTCGCAGAGTaGTACGTAGAGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAEHVAE*YVEEQA
Trigger: GGCCTGTTCCTCTACGTAGCACTCTGCGACATGCTC...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGAGCATGTCGCAGAGTaGTACGTAGAGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGEHVAE*YVEEQA
Trigger: GGCCTGTTCCTCTACGTAGCACTCTGCGACATGCTC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCTCCCCTGGAGCCACTaGCAATTTGATGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGLPWSH*QFDGRG
Trigger: CCCTCTGCCATCAAATTGGCAGTGGCTCCAGGGGAG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTAGATACCTCTCTGACTaGCTGAGCTGGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGARYLSD*LSWSWT
Trigger: CGTCCAGGACCAGCTCAGCCAGTCAGAGAGGTATCT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAAGATACCTCTCTGACTaGCTGAGCTGGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRARYLSD*LSWSWT
Trigger: CGTCCAGGACCAGCTCAGCCAGTCAGAGAGGTATCT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGAGATACCTCTCTGACTaGCTGAGCTGGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGRYLSD*LSWSWT
Trigger: CGTCCAGGACCAGCTCAGCCAGTCAGAGAGGTATCT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGCAGCCCCAGCACCTTaGGCGTCAGATGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWAAPAP*ASDAGQ
Trigger: CTGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTCGTGTGGCAACTCGTaGCAGAACACGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRSCGNS*QNTASE
Trigger: CTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGTCCCCCAGCTCGTGTaGCAACTCGTGGCAGAACAC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRVPQLV*QLVAEH
Trigger: GTGTTCTGCCACGAGTTGCCACACGAGCTGGGGGAC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTACTGGAGTTGGGACTaGGGCCTCTATAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRYWSWD*GLYRGF
Trigger: GAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTACTGGAGTTGGGACTaGGGCCTCTATAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGYWSWD*GLYRGF
Trigger: GAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTACTGGAGTTGGGACTaGGGCCTCTATAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAYWSWD*GLYRGF
Trigger: GAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTCCTCTCTCAACCCCTaGCGCCCTTCCGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWSSLNP*RPSVSP
Trigger: TGGGGAGACGGAAGGGCGCCAGGGGTTGAGAGAGGA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWKSTKY*GLGKAW
Trigger: CCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTT...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCAGGGTATCAGAAGGTaGTGTCATCCTCGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRQGIRR*CHPRTG
Trigger: CCCTGTACGAGGATGACATCACCTTCTGATACCCTG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGGGACCTCGCTGCTGTaGTGCTGGAACACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRGTSLL*CWNTKS
Trigger: GGACTTTGTGTTCCAGCAGCACAGCAGCGAGGTCCC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGACCTTGGGCGTCAGATaGAGGACAGCGTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWTLGVR*RTASPV
Trigger: CACTGGGGACGCTGTCCTGCATCTGACGCCCAAGGT...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGAGCATGTCGCAGAGTaGTACGTAGAGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGEHVAE*YVEEQA
Trigger: GGCCTGTTCCTCTACGTAGCACTCTGCGACATGCTC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTCGCTGCTGTGCTGCTaGAACACAAAGTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGSLLCC*NTKSTK
Trigger: CTTCGTGGACTTTGTGTTCCAGCAGCACAGCAGCGA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATCGCTGCTGTGCTGCTaGAACACAAAGTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRASLLCC*NTKSTK
Trigger: CTTCGTGGACTTTGTGTTCCAGCAGCACAGCAGCGA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCTGGGCTCAGTCTCCTaGGCTCAGGGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWLGSVS*AQGSAA
Trigger: AGCTGCTGAACCCTGAGCCCAGGAGACTGAGCCCAG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTCGTGTGGCAACTCGTaGCAGAACACGGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWSCGNS*QNTASE
Trigger: CTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCACAGACAGGCACTGTaGGCAGAGACAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGHRQAL*AETSEQ
Trigger: CTGCTCACTTGTCTCTGCCCACAGTGCCTGTCTGTG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGGTACAGATACCTCTCTaGCTGGCTGAGCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRVQIPL*LAELVL
Trigger: CAGGACCAGCTCAGCCAGTCAGAGAGGTATCTGTAC...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTGGGCAGCAGGAGATTaGAGAGGTTCTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGWAAGD*RGSQTG
Trigger: TCCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCAGGGTATCAGAAGGTaGTGTCATCCTCGTACAGGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGQGIRR*CHPRTG
Trigger: CCCTGTACGAGGATGACATCACCTTCTGATACCCTG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGACCTCGCTGCTGTGCTaGTGGAACACAAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRTSLLC*WNTKST
Trigger: CGTGGACTTTGTGTTCCAGCAGCACAGCAGCGAGGT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACCTCGCTGCTGTaGTGCTGGAACACAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWGTSLL*CWNTKS
Trigger: GGACTTTGTGTTCCAGCAGCACAGCAGCGAGGTCCC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGACTCCAACCGCGAGTaGCACGTAGAGACCAGCGAA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWDSNRE*HVETSE
Trigger: TTCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTCGCTGCTGTGCTGCTaGAACACAAAGTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGSLLCC*NTKSTK
Trigger: CTTCGTGGACTTTGTGTTCCAGCAGCACAGCAGCGA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCAGCCATCACGTCCCTaGCACTCAGGCATACCGTGT +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWQPSRP*HSGIPC
Trigger: ACACGGTATGCCTGAGTGCCAGGGACGTGATGGCTG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGCLYWS*DWGLYR
Trigger: CCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACA...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRCLYWS*DWGLYR
Trigger: CCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTTCCGACAGTCCATATaGAGCCATCACGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWFRQSI*SHHVPG
Trigger: GCCAGGGACGTGATGGCTGCATATGGACTGTCGGAA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR GCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGAGCATGTCGCAGAGTaGTACGTAGAGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWEHVAE*YVEEQA
Trigger: GGCCTGTTCCTCTACGTAGCACTCTGCGACATGCTC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGAGATACCTCTCTGACTaGCTGAGCTGGTCCTGGACG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWRYLSD*LSWSWT
Trigger: CGTCCAGGACCAGCTCAGCCAGTCAGAGAGGTATCT...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAATCTTAAGTCAAAGGTaGGGGACTAGGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAILSQR*GTRAGY
Trigger: ATACCCTGCCCTAGTCCCCCACCTTTGACTTAAGAT...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTATCTTAAGTCAAAGGTaGGGGACTAGGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAILSQR*GTRAGY
Trigger: ATACCCTGCCCTAGTCCCCCACCTTTGACTTAAGAT...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCTCTATAGGGGCTTCTaGTTTCTGGGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SKDKSVFTGVGTGASIGALYRGF*FLGCRF
Trigger: AAACCTACAGCCCAGAAACCAGAAGCCCCTATAGAG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCTCTATAGGGGCTTCTaGTTTCTGGGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRLYRGF*FLGCRF
Trigger: AAACCTACAGCCCAGAAACCAGAAGCCCCTATAGAG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGCLYWS*DWGLYR
Trigger: CCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCACAGACAGGCACTGTaGGCAGAGACAAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWHRQAL*AETSEQ
Trigger: CTGCTCACTTGTCTCTGCCCACAGTGCCTGTCTGTG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR TCA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGCAGCAGGAGATTaGAGAGGTTCTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRWAAGD*RGSQTG
Trigger: TCCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCTCTATAGGGGCTTCTaGTTTCTGGGCTGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGLYRGF*FLGCRF
Trigger: AAACCTACAGCCCAGAAACCAGAAGCCCCTATAGAG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR TCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGGGCAGCAGGAGATTaGAGAGGTTCTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWWAAGD*RGSQTG
Trigger: TCCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CCA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGG +
Preference number: 4 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWCLYWS*DWGLYR
Trigger: CCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS GCA 90 bp CCAGCTGCAGGGACACACCGTGGCTGTGGCCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGTCCTCCAGGTCCTCCGGGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PAAGTHRGCGPRGYG*CGRRARPPGPPGPW
Trigger: CCAGGGACCCGGAGGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 90 bp GGTGCCAGCTGCAGGGACACACCGTGGCTGTGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGCCCGTCCTCCAGGTCCTCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: GASCRDTPWLWPPWL*LLWPQGPSSRSSGS
Trigger: GGACCCGGAGGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 90 bp TGCCGGAGCTCGCTGGGTGCCAGCTGCAGGGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTGCTGTGGCCGCAGGGCCCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: CRSSLGASCRDTPWL*PPWLWLLWPQGPSS
Trigger: GGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 90 bp TTGGGCTGCCGGAGCTCGCTGGGTGCCAGCTGCAGGGACACACCGTaGCTGTGGCCCCCGTGGCTATGGCTGCTGTGGCCGCAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LGCRSSLGASCRDTP*LWPPWLWLLWPQGP
Trigger: CGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCGGCAGCCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 90 bp TCGCTGGGTGCCAGCTGCAGGGACACACCGTGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCGCAGGGCCCGTCCTCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLGASCRDTPWLWPP*LWLLWPQGPSSRSS
Trigger: GGAGGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 90 bp CCCCCAGCTCGTGTGGCAACTCGTGGCAGAACACGGCCAGCGAGGTaGCCAGCCCGGTCTTCCAGGAGGACGCGAAGGCGGCGCCCACGG +
Preference number: 5 (lower is better)
Translates to: PPARVATRGRTRPAR*PARSSRRTRRRRPR
Trigger: CCGTGGGCGCCGCCTTCGCGTCCTCCTGGAAGACCGGGCTGGCCACCTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGAGCTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000531013.1
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 90 bp CCAGCGAAGGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCGAAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PAKAVSAEARFSSSA*RTDSPACSKAAKSP
Trigger: GGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000531013.1
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 90 bp GGCAGTAGCCTCAACTCTGCGGGCGCAGAGGCCCGTGGGTTCGCGTaGCCTGTCGCCTACCGCCAAGCCTTGGGCCCCACCCGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSSLNSAGAEARGFA*PVAYRQALGPTRAP
Trigger: TGGAGCGCGGGTGGGGCCCAAGGCTTGGCGGTAGGCGACAGGCCACGCGAACCCACGGGCCTCTGCGCCCGCAGAGTTGAGGCTACTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS GCA 90 bp CGGGGTCAGGGCCTTGGGGCTCTCGAGCAGGGCCAGGAGGTGGTCTaGATGAGAGGCCCAGAGGCCAGCCCGAGCGTCCTCACAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RGQGLGALEQGQEVV*MRGPEASPSVLTGA
Trigger: GGCACCTGTGAGGACGCTCGGGCTGGCCTCTGGGCCTCTCATGCAGACCACCTCCTGGCCCTGCTCGAGAGCCCCAAGGCCCTGACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CCA 90 bp CCAGCGAAGGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCGAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PAKAVSAEARFSSSA*RTDSPACSKAAKSP
Trigger: AGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530807.5
ENST00000642871.1
CDS TCA 90 bp ACAGGCCGCCCAGAGCCTCTTGATCCAGAGCGCCCTGGCCAGAGGTaGGCAGGCTCAGCAGACCAGCAGGCGGGGACGCCGTCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: TGRPEPLDPERPGQR*AGSADQQAGTPSPS
Trigger: TGACGGCGACGGCGTCCCCGCCTGCTGGTCTGCTGAGCCTGCTCACCTCTGGCCAGGGCGCTCTGGATCAAGAGGCTCTGGGCGGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301305.8
ENST00000526658.1
ENST00000644877.1
ENST00000645411.3
CDS GCA 90 bp GAGACCAGCGAAGGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCGAAGTC +
Preference number: 5 (lower is better)
Translates to: ETSEGRERGGQVQQQ*LAHGQPRVQQGGEV
Trigger: GACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 90 bp TTGGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCGAAGTCCCCTaGGCTCAGTCTCCTGGGCTCAGGGTTCAGCAGCTCCGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAHGQPRVQQGGEVP*AQSPGLRVQQLRAL
Trigger: GAGAGCCCGGAGCTGCTGAACCCTGAGCCCAGGAGACTGAGCCCAGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530807.5
ENST00000642871.1
CDS TCA 90 bp AGGAGCCAGGGCCGCGGGTCCCGTACTTTCAACATCGCCGGGAGCTaGGGAGCAAGTGGGCACCGGGTCAGCGCCCCTGCTCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RSQGRGSRTFNIAGS*GASGHRVSAPAQLL
Trigger: GAGGAGCTGAGCAGGGGCGCTGACCCGGTGCCCACTTGCTCCTCAGCTCCCGGCGATGTTGAAAGTACGGGACCCGCGGCCCTGGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS GCA 90 bp GAGGCCAGGTTCAGCAGCAGTGCTTGGCGCACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCCCCTGGGCTCAGTCTCCTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: EARFSSSAWRTDSPA*SKAAKSPGLSLLGS
Trigger: TGAGCCCAGGAGACTGAGCCCAGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530807.5
ENST00000642871.1
CDS TCA 90 bp CGAAGTACTGAGGGCTCGGCAAGGCGTGGAAGCAAGACCCGCTCCTaGCATGGTCCAGCAGGGCAGCCAGGACGCCGCCAGCACTGCCCG +
Preference number: 5 (lower is better)
Translates to: RSTEGSARRGSKTRS*HGPAGQPGRRQHCP
Trigger: CGGGCAGTGCTGGCGGCGTCCTGGCTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCCTCAGTACTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000526658.1
ENST00000643598.1
ENST00000644877.1
ENST00000645411.3
CDS CCA 90 bp GGCGTAGAGCCCGGCCAGCATAGCCAGGAGGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCTGTGTGTATGCAGCCCCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: GVEPGQHSQEAPGGL*AEALFAVCMQPQHL
Trigger: AAGGTGCTGGGGCTGCATACACACAGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGCCTCCTGGCTATGCTGGCCGGGCTCTACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS TCA 90 bp CCACGGCCAGCCCGTCGGCGAAGTTGTGCACGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCCTCAACTCTGCGGGCGCAGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PRPARRRSCARRRPE*SYRAVASTLRAQRP
Trigger: GGGCCTCTGCGCCCGCAGAGTTGAGGCTACTGCCCTATATGATCACTCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCTGGCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS GCA 90 bp TGCCAGGATCCAGGCCTCGCTCTCCTCGCTGACTCCAACCGCGAGTaGCACGTAGAGACCAGCGAAGGCCGTGAGCGCGGAGGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: CQDPGLALLADSNRE*HVETSEGRERGGQV
Trigger: AACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGGCCTGGATCCTGGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 90 bp GCCCAGAGCAGCCCCTCCCCTCGCCATCCTGACCATGTCGCAGAGTaGTACGTAGAGGAACAGGCCGGTGGCCACTGCCAGGATCCAGGC +
Preference number: 5 (lower is better)
Translates to: AQSSPSPRHPDHVAE*YVEEQAGGHCQDPG
Trigger: GCCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCTACGTAGCACTCTGCGACATGGTCAGGATGGCGAGGGGAGGGGCTGCTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 90 bp GTGCTCAGTGGGTGTTGCTGTGGCCAAGGCCCAGTGCTTCTGGGCTaGCTGAGGGCGGCTTTGCTGGGGTTGTCCAGGGCCAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: VLSGCCCGQGPVLLG*LRAALLGLSRARLG
Trigger: CCCCAGTCTGGCCCTGGACAACCCCAGCAAAGCCGCCCTCAGCCAGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS GCA 90 bp GGCCCAGGCCTCCGGGGTCACCCCAGCCTGTTCCGACAGTCCATATaGAGCCATCACGTCCCTGGCACTCAGGCATACCGTGTCCCACAC +
Preference number: 5 (lower is better)
Translates to: GPGLRGHPSLFRQSI*SHHVPGTQAYRVPH
Trigger: GTGTGGGACACGGTATGCCTGAGTGCCAGGGACGTGATGGCTGCATATGGACTGTCGGAACAGGCTGGGGTGACCCCGGAGGCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS GCA 90 bp AGACCAGGGACGCCATACTCAGCTCCCAGCGTGCTCAGTGGGTGTTaGTGTGGCCAAGGCCCAGTGCTTCTGGGCTGGCTGAGGGCGGCT +
Preference number: 5 (lower is better)
Translates to: RPGTPYSAPSVLSGC*CGQGPVLLGWLRAA
Trigger: AGCCGCCCTCAGCCAGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCACGCTGGGAGCTGAGTATGGCGTCCCTGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS GCA 90 bp CCCCAGCTCCAGCGAGACCAGGGACGCCATACTCAGCTCCCAGCGTaGTCAGTGGGTGTTGCTGTGGCCAAGGCCCAGTGCTTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: PQLQRDQGRHTQLPA*SVGVAVAKAQCFWA
Trigger: AGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCACGCTGGGAGCTGAGTATGGCGTCCCTGGTCTCGCTGGAGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS GCA 90 bp GCGTCCTCCACAGACAGGCACTTTCCACACGGCCCGTTGGCGCAGTaGACACGGTCCGCCAGCGTATTTAACAGGCCGCCCAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: ASSTDRHFPHGPLAQ*TRSASVFNRPPRAS
Trigger: AGAGGCTCTGGGCGGCCTGTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGTGCCTGTCTGTGGAGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS GCA 90 bp GAGCATGTCGCAGAGTGCTACGTAGAGGAACAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCTCTCCTCGCTGACTCCAACCGCGAG +
Preference number: 5 (lower is better)
Translates to: EHVAECYVEEQAGGH*QDPGLALLADSNRE
Trigger: CTCGCGGTTGGAGTCAGCGAGGAGAGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCTACGTAGCACTCTGCGACATGCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 90 bp GACCATGTCGCAGAGTGCTACGTAGAGGAACAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCTCTCCTCGCTGACTCCAACCGCGAG +
Preference number: 5 (lower is better)
Translates to: DHVAECYVEEQAGGH*QDPGLALLADSNRE
Trigger: CTCGCGGTTGGAGTCAGCGAGGAGAGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCTACGTAGCACTCTGCGACATGGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 90 bp CCTGGGGGTCCTGAGTGCAGCTCTCCTGGCTTCGAGGCACCCCGATaGGGAGAAGGCAGTGCCGCAATTGTCCTTTCTCAGCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PGGPECSSPGFEAPR*GEGSAAIVLSQLRA
Trigger: GGCCCTCAGCTGAGAAAGGACAATTGCGGCACTGCCTTCTCCCCATCGGGGTGCCTCGAAGCCAGGAGAGCTGCACTCAGGACCCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 90 bp TCCAGCGAGACCAGGGACGCCATACTCAGCTCCCAGCGTGCTCAGTaGGTGTTGCTGTGGCCAAGGCCCAGTGCTTCTGGGCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SSETRDAILSSQRAQ*VLLWPRPSASGLAE
Trigger: CTCAGCCAGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCACGCTGGGAGCTGAGTATGGCGTCCCTGGTCTCGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS TCA 90 bp CCACGGCCAGCCCGTCGGCGAAGTTGTGCACGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCCTCAACTCTGGGCTCAGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PRPARRRSCARRRPE*SYRAVASTLGSVSW
Trigger: CCAGGAGACTGAGCCCAGAGTTGAGGCTACTGCCCTATATGATCACTCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCTGGCCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
CDS GCA 90 bp GTGCAGCTCTCCTGGCTTCGAGGCACCCCGATGGGGAGAAGGCAGTaGCGCAATTGTCCTTTCTCAGCTGAGGGCCCTTCCCACCCAGCA +
Preference number: 5 (lower is better)
Translates to: VQLSWLRGTPMGRRQ*RNCPFSAEGPSHPA
Trigger: TGCTGGGTGGGAAGGGCCCTCAGCTGAGAAAGGACAATTGCGGCACTGCCTTCTCCCCATCGGGGTGCCTCGAAGCCAGGAGAGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACCCGGGGTCAGGGCCTaGGGGCTCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAPGVRA*GLSSRA
Trigger: GGCCCTGCTCGAGAGCCCCAAGGCCCTGACCCCGGG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCCCGGGGTCAGGGCCTaGGGGCTCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGPGVRA*GLSSRA
Trigger: GGCCCTGCTCGAGAGCCCCAAGGCCCTGACCCCGGG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS TCA 90 bp GGGACCTCGCTGCTGTGCTGCTGGAACACAAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGGAAGCAAGACCCGCTCCTGACATGG +
Preference number: 5 (lower is better)
Translates to: GTSLLCCWNTKSTKY*GLGKAWKQDPLLTW
Trigger: CCATGTCAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTTTGTGTTCCAGCAGCACAGCAGCGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000526658.1
ENST00000643598.1
ENST00000644877.1
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCCCGGGGTCAGGGCCTaGGGGCTCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRPGVRA*GLSSRA
Trigger: GGCCCTGCTCGAGAGCCCCAAGGCCCTGACCCCGGG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTCTACGCAGGCCGTCTaGGGGGTCTGGCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRSTQAV*GVWPAA
Trigger: GGCTGCCGGCCAGACCCCCAAGACGGCCTGCGTAGA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643598.1
ENST00000645411.3
CDS TCA 90 bp ATTCCTGTTTGGGGACAGGTCCCACCTGCTGCCCACACACCCGGGTaGATTTCCCTGACCCCACTCCTCAGGCAGGCAGGGTCTCCATAT +
Preference number: 5 (lower is better)
Translates to: IPVWGQVPPAAHTPG*ISLTPLLRQAGSPY
Trigger: ATATGGAGACCCTGCCTGCCTGAGGAGTGGGGTCAGGGAAATTCACCCGGGTGTGTGGGCAGCAGGTGGGACCTGTCCCCAAACAGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGCAGGTGCCCTCGGGGTaGCTGAGGTACAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRQVPSG*LRYRTA
Trigger: CGCCGTCCTGTACCTCAGCAACCCCGAGGGCACCTG...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCCCGGGGTCAGGGCCTaGGGGCTCTCGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWPGVRA*GLSSRA
Trigger: GGCCCTGCTCGAGAGCCCCAAGGCCCTGACCCCGGG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATCTACGCAGGCCATCTaGGGGGTCTGGCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GCRFVRCGILSQRWGTRASTQAI*GVWPAA
Trigger: GGCTGCCGGCCAGACCCCCAAGATGGCCTGCGTAGA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000301305.8
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGAGCCCGTCGGCGAAGTaGTGCACGGCGTCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRSPSAK*CTASPR
Trigger: TCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCT...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGAGCCCGTCGGCGAAGTaGTGCACGGCGTCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGSPSAK*CTASPR
Trigger: TCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCT...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGTTCAGCAGCAGTGCTaGGCGCACGGACAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRVQQQC*AHGQPR
Trigger: GCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAAC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGGCGGCTTTGCTGGGGTaGTCCAGGGCCAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGAALLG*SRARLG
Trigger: CCCCAGTCTGGCCCTGGACAACCCCAGCAAAGCCGC...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTGGCTGAGGGCGGCTTaGCTGGGGTTGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRWLRAA*LGLSRA
Trigger: GGCCCTGGACAACCCCAGCAAAGCCGCCCTCAGCCA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS GCA 90 bp TTCTCAGCTGAGGGCCCTTCCCACCCAGCAAGGAGAGCACAGCCATaGTCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCC +
Preference number: 5 (lower is better)
Translates to: FSAEGPSHPARRAQP*SKDKSVFTGVGTGA
Trigger: GGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGAGCATGGCTGTGCTCTCCTTGCTGGGTGGGAAGGGCCCTCAGCTGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGTTTCCACACGGCCCGTaGGCGCAGTGCACACGGTCC +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRFPHGP*AQCTRS
Trigger: GGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAA...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGCAGGTGCCCTCGGGGTaGCTGAGGTACAGGACGGCG +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGQVPSG*LRYRTA
Trigger: CGCCGTCCTGTACCTCAGCAACCCCGAGGGCACCTG...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGAGCCCGTCGGCGAAGTaGTGCACGGCGTCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGSPSAK*CTASPR
Trigger: TCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCT...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGTTCAGCAGCAGTGCTaGGCGCACGGACAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGVQQQC*AHGQPR
Trigger: GCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAAC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CCA 90 bp GGATTAACGCCTCAGAGTCAGAAGAGGCTGGCGTCCCAGGAACCGTaGGCTGCCACACACTCTGGTCTGACGATCTCCAGGTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GLTPQSQKRLASQEP*AATHSGLTISRFAF
Trigger: GAAAGCAAACCTGGAGATCGTCAGACCAGAGTGTGTGGCAGCCCACGGTTCCTGGGACGCCAGCCTCTTCTGACTCTGAGGCGTTAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp TGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCAGGGCGTGCTCAGTGGGTGTaGCTGTGGCCAAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: CRFVRCGILSQRWGTRAGRAQWV*LWPRPS
Trigger: ACTGGGCCTTGGCCACAGCAACACCCACTGAGCACG...CCCTGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACGTGCTCAGTGGGTGTaGCTGTGGCCAAGGCCCAGT +
Preference number: 5 (lower is better)
Translates to: GCRFVRCGILSQRWGTRARAQWV*LWPRPS
Trigger: ACTGGGCCTTGGCCACAGCAACACCCACTGAGCACG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTCTACGCAGGCCATCTaGGGGGTCTGGCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRSTQAI*GVWPAA
Trigger: GGCTGCCGGCCAGACCCCCAAGATGGCCTGCGTAGA...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000301305.8
CDS-3UTR CAA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCATGCAGCCCCAGCACCTaGGGCGTCAGATGCAGGACA +
Preference number: 5 (lower is better)
Translates to: GCRFVRCGILSQRWGTRACSPST*GVRCRT
Trigger: TGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGCA...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTTGCAGCCCCAGCACCTaGGGCGTCAGATGCAGGACA +
Preference number: 5 (lower is better)
Translates to: SKDKSVFTGVGTGASIGACSPST*GVRCRT
Trigger: TGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGCA...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGAGCCCGTCGGCGAAGTaGTGCACGGCGTCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRSPSAK*CTASPR
Trigger: TCTGGGCGACGCCGTGCACAACTTCGCCGACGGGCT...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp CTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGGAGCCACTGCCAATTaGATGGCAGAGGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LGCRFVRCGILSQRWGTRGATAN*MAEGRQ
Trigger: CTGCCGGCCCTCTGCCATCAAATTGGCAGTGGCTCC...CCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS-3UTR CAA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCACACACTGGAGCTGTaGCTGGAGCTGATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: SKDKSVFTGVGTGASIGAHTLEL*LELMRG
Trigger: GCCCCTCATCAGCTCCAGCAACAGCTCCAGTGTGTG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGACTAGGGCACACACACTGGAGCTGTaGCTGGAGCTGATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GCRFVRCGILSQRWGTRAHTLEL*LELMRG
Trigger: GCCCCTCATCAGCTCCAGCAACAGCTCCAGTGTGTG...TGCCCTAGTCCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGTGCAGCCCCAGCACCTaGGGCGTCAGATGCAGGACA +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGCSPST*GVRCRT
Trigger: TGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGCA...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGTTCAGCAGCAGTGCTaGGCGCACGGACAGCCCCGC +
Preference number: 5 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWVQQQC*AHGQPR
Trigger: GCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAAC...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGGGGGGAGCCACTGCCAATTaGATGGCAGAGGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: WFLGCRFVRCGILSQRWGGATAN*MAEGRQ
Trigger: CTGCCGGCCCTCTGCCATCAAATTGGCAGTGGCTCC...CCCCCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS CCA 90 bp GAGAGCACAGCCATGCTCCAAGGACAAGAGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGGGGCTTCTGGTTTCTGGGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: ESTAMLQGQECLYWS*DWGLYRGFWFLGCR
Trigger: CCTACAGCCCAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGAGCATGGCTGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 90 bp AGCAAGGAGAGCACAGCCATGCTCCAAGGACAAGAGTGTCTTTACTaGAGTTGGGACTGGGGCCTCTATAGGGGCTTCTGGTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SKESTAMLQGQECLY*SWDWGLYRGFWFLG
Trigger: GCCCAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGAGCATGGCTGTGCTCTCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCACACACTGGAGCTGTaGCTGGAGCTGATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRHTLEL*LELMRG
Trigger: GCCCCTCATCAGCTCCAGCAACAGCTCCAGTGTGTG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGTGCAGCCCCAGCACCTaGGGCGTCAGATGCAGGACA +
Preference number: 5 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWCSPST*GVRCRT
Trigger: TGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGCA...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp TCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTGGGGCCTCTATAGGGGCTCTGGGCAGCAGGAGATaGAAGAGGTTCTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SKDKSVFTGVGTGASIGALGSRR*KRFSNR
Trigger: CCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCAG...AGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS-3UTR CAA 90 bp GGCTTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGCTGGGCAGCAGGAGATaGAAGAGGTTCTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: GFWFLGCRFVRCGILSQRLGSRR*KRFSNR
Trigger: CCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCAG...CCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS TCA 90 bp GAACTTATTCATGATACAGATTCCTTTGCTCACATGTTTCCGCGCTaGCCTTCTCCCCACTTGTTGCCCTGCTACACTCCCCTCGCTAAG +
Preference number: 5 (lower is better)
Translates to: ELIHDTDSFAHMFPR*PSPHLLPCYTPLAK
Trigger: CTTAGCGAGGGGAGTGTAGCAGGGCAACAAGTGGGGAGAAGGTCAGCGCGGAAACATGTGAGCAAAGGAATCTGTATCATGAATAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS-3UTR CAA 90 bp TTCTGGTTTCTGGGCTGTAGGTTTGTGAGGTGTGGGATCTTAAGTCAAAGGTGGCTGGGCAGCAGGAGATaGAAGAGGTTCTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: FWFLGCRFVRCGILSQRWLGSRR*KRFSNR
Trigger: CCTGTTTGAGAACCTCTTCAATCTCCTGCTGCCCAG...CCACCTTTGACTTAAGATCCCACACCTCACAAACCTACAGCCCAGAAACCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS TCA 90 bp CTGTTTCCTAGAGACTTCAGAGAGAGCATTGCTCTCCTGACACTTTaGTTCCTAACTTTCAGCCTCCAGAACTGTGAGAATAAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LFPRDFRESIALLTL*FLTFSLQNCENKFL
Trigger: CAGAAACTTATTCTCACAGTTCTGGAGGCTGAAAGTTAGGAATCAAAGTGTCAGGAGAGCAATGCTCTCTCTGAAGTCTCTAGGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 90 bp AGAAACATAAATCTAGCGCTGCTGCTCTGTTACTCTTTGCTACAATaGCATGTTTGGGTAAAGAGAAACATAAATTTAGCCTACGTGCAC +
Preference number: 5 (lower is better)
Translates to: RNINLALLLCYSLLQ*HVWVKRNINLAYVH
Trigger: GTGCACGTAGGCTAAATTTATGTTTCTCTTTACCCAAACATGTCATTGTAGCAAAGAGTAACAGAGCAGCAGCGCTAGATTTATGTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS GCA 72 bp CCCGCGAGCCCAGCGCTGTCCGCCCGCCTTGCTCACTaGTGCCTACCCAGGGCGGGCCCAGTGCCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PASPALSARLAH*CLPRAGPVPAS
Trigger: GGAAGCTGGCACTGGGCCCGCCCTGGGTAGGCAGCAGTGAGCAAGGCGGGCGGACAGCGCTGGGCTCGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527148.5
ENST00000643303.1
CDS GCA 72 bp GGGACACACCGTGGCTGTGGCCCCCGTGGCTATGGCTaGTGTGGCCGCAGGGCCCGTCCTCCAGGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GTHRGCGPRGYG*CGRRARPPGPP
Trigger: CGGAGGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp ACACCGTGGCTGTGGCCCCCGTGGCTATGGCTGCTGTaGCCGCAGGGCCCGTCCTCCAGGTCCTCCGGGTCC +
Preference number: 6 (lower is better)
Translates to: TPWLWPPWLWLL*PQGPSSRSSGS
Trigger: GGACCCGGAGGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp GCCAGCTGCAGGGACACACCGTGGCTGTGGCCCCCGTaGCTATGGCTGCTGTGGCCGCAGGGCCCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: ASCRDTPWLWPP*LWLLWPQGPSS
Trigger: GGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp GCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTGCTTaGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: AVSAEARFSSSA*RTDSPACSKAA
Trigger: CGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CAA 72 bp GGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTGCTaGGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: GRERGGQVQQQC*AHGQPRVQQGG
Trigger: GCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CAA 90 bp GAGGCCCAGAGGCCAGCCCGAGCGTCCTCACAGGTGCCCTCGGGGTaGCTGAGGTACAGGACGGCGGCGGCACTGAGGCGGGCGACGTAC +
Preference number: 6 (lower is better)
Translates to: EAQRPARASSQVPSG*LRYRTAAALRRATY
Trigger: GTACGTCGCCCGCCTCAGTGCCGCCGCCGTCCTGTACCTCAGCAACCCCGAGGGCACCTGTGAGGACGCTCGGGCTGGCCTCTGGGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CCA 72 bp TGCAGGGACACACCGTGGCTGTGGCCCCCGTGGCTATaGCTGCTGTGGCCGCAGGGCCCGTCCTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: CRDTPWLWPPWL*LLWPQGPSSRS
Trigger: GGACCTGGAGGACGGGCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp TCGCTGGGTGCCAGCTGCAGGGACACACCGTGGCTGTaGCCCCCGTGGCTATGGCTGCTGTGGCCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: SLGASCRDTPWL*PPWLWLLWPQG
Trigger: GCCCTGCGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp CGGAGCTCGCTGGGTGCCAGCTGCAGGGACACACCGTaGCTGTGGCCCCCGTGGCTATGGCTGCTGTGGCCG +
Preference number: 6 (lower is better)
Translates to: RSSLGASCRDTP*LWPPWLWLLWP
Trigger: CGGCCACAGCAGCCATAGCCACGGGGGCCACAGCCACGGTGTGTCCCTGCAGCTGGCACCCAGCGAGCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000531789.1
ENST00000643598.1
ENST00000645411.3
ENST00000646333.1
CDS CCA 72 bp GGGGTCGCCCCCTGGGCTCACCTGGGCTCAGTCTCCTaGGCTCAGGGTTCAGCAGCTCCGGGCTCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GVAPWAHLGSVS*AQGSAAPGSPP
Trigger: CGGAGGAGAGCCCGGAGCTGCTGAACCCTGAGCCCAGGAGACTGAGCCCAGGTGAGCCCAGGGGGCGACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS CCA 72 bp CTCAACTCTGCGGGCGCAGAGGCCCGTGGGTTCGCGTaGCCTGTCGCCTACCGCCAAGCCTTGGGCCCCACC +
Preference number: 6 (lower is better)
Translates to: LNSAGAEARGFA*PVAYRQALGPT
Trigger: GGTGGGGCCCAAGGCTTGGCGGTAGGCGACAGGCCACGCGAACCCACGGGCCTCTGCGCCCGCAGAGTTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS CAA 72 bp AGGCCAGCCCGAGCGTCCTCACAGGTGCCCTCGGGGTaGCTGAGGTACAGGACGGCGGCGGCACTGAGGCGG +
Preference number: 6 (lower is better)
Translates to: RPARASSQVPSG*LRYRTAAALRR
Trigger: CCGCCTCAGTGCCGCCGCCGTCCTGTACCTCAGCAACCCCGAGGGCACCTGTGAGGACGCTCGGGCTGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CAA 90 bp ACCAGCGAAGGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTGCTaGGCGCACGGACAGCCCCGCGTGCAGCAAGGCGGCGAAGTCCCC +
Preference number: 6 (lower is better)
Translates to: TSEGRERGGQVQQQC*AHGQPRVQQGGEVP
Trigger: GGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 72 bp GAAGGCCGTGAGCGCGGAGGCCAGGTTCAGCAGCAGTaGTTGGCGCACGGACAGCCCCGCGTGCAGCAAGGC +
Preference number: 6 (lower is better)
Translates to: EGRERGGQVQQQ*LAHGQPRVQQG
Trigger: GCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 72 bp GCCCAGGCCCAGGGCGTCCTCCACAGACAGGCACTGTaGGCAGAGACAAGTGAGCAGGGGCGCTGGGCCCAC +
Preference number: 6 (lower is better)
Translates to: AQAQGVLHRQAL*AETSEQGRWAH
Trigger: GTGGGCCCAGCGCCCCTGCTCACTTGTCTCTGCCCACAGTGCCTGTCTGTGGAGGACGCCCTGGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276833.9
ENST00000643598.1
CDS TCA 72 bp GAGGGCTCGGCAAGGCGTGGAAGCAAGACCCGCTCCTaGCATGGTCCAGCAGGGCAGCCAGGACGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: EGSARRGSKTRS*HGPAGQPGRRQ
Trigger: CTGGCGGCGTCCTGGCTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000526658.1
ENST00000643598.1
ENST00000644877.1
ENST00000645411.3
CDS TCA 72 bp GGCCGCGGGTCCCGTACTTTCAACATCGCCGGGAGCTaGGGAGCAAGTGGGCACCGGGTCAGCGCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: GRGSRTFNIAGS*GASGHRVSAPA
Trigger: AGCAGGGGCGCTGACCCGGTGCCCACTTGCTCCTCAGCTCCCGGCGATGTTGAAAGTACGGGACCCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS GCA 72 bp TTCAGCAGCAGTGCTTGGCGCACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCCCCCAGCTCGTGTGGC +
Preference number: 6 (lower is better)
Translates to: FSSSAWRTDSPA*SKAAKSPSSCG
Trigger: GCCACACGAGCTGGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000531013.1
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 72 bp CCCGGCCAGCATAGCCAGGAGGCGCCAGGTGGGCTGTaGGCTGAGGCCCTCTTCGCTGTGTGTATGCAGCCC +
Preference number: 6 (lower is better)
Translates to: PGQHSQEAPGGL*AEALFAVCMQP
Trigger: GGGCTGCATACACACAGCGAAGAGGGCCTCAGCCCACAGCCCACCTGGCGCCTCCTGGCTATGCTGGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CCA 72 bp CGTGTGGCAACTCGTGGCAGAACACGGCCAGCGAGGTaGCCAGCCCGGTCTTCCAGGAGGACGCGAAGGCGG +
Preference number: 6 (lower is better)
Translates to: RVATRGRTRPAR*PARSSRRTRRR
Trigger: CCGCCTTCGCGTCCTCCTGGAAGACCGGGCTGGCCACCTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000531013.1
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 72 bp AAGGCGGCGAAGTCCCCCAGCTCGTGTGGCAACTCGTaGCAGAACACGGCCAGCGAGGTGGCCAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: KAAKSPSSCGNS*QNTASEVASPV
Trigger: GACCGGGCTGGCCACCTCGCTGGCCGTGTTCTGCCACGAGTTGCCACACGAGCTGGGGGACTTCGCCGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000531013.1
ENST00000532718.5
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS CCA 72 bp GTGGGTTCGCGTGGCCTGTCGCCTACCGCCAAGCCTTaGGCCCCACCCGCGCTCCACACAAACCCCAGATCC +
Preference number: 6 (lower is better)
Translates to: VGSRGLSPTAKP*APPALHTNPRS
Trigger: GGATCTGGGGTTTGTGTGGAGCGCGGGTGGGGCCCAAGGCTTGGCGGTAGGCGACAGGCCACGCGAACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS CAA 72 bp CGTGGGTTCGCGTGGCCTGTCGCCTACCGCCAAGCCTaGGGCCCCACCCGCGCTCCACACAAACCCCAGATC +
Preference number: 6 (lower is better)
Translates to: RGFAWPVAYRQA*GPTRAPHKPQI
Trigger: GATCTGGGGTTTGTGTGGAGCGCGGGTGGGGCCCAAGGCTTGGCGGTAGGCGACAGGCCACGCGAACCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS GCA 72 bp CCAGGCCTCGCTCTCCTCGCTGACTCCAACCGCGAGTaGCACGTAGAGACCAGCGAAGGCCGTGAGCGCGGA +
Preference number: 6 (lower is better)
Translates to: PGLALLADSNRE*HVETSEGRERG
Trigger: TCCGCGCTCACGGCCTTCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGGCCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 72 bp TTCAGCAGCAGTGCTTGGCGCACGGACAGCCCCGCGTaGAGCAAGGCGGCGAAGTCCCCTGGGCTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: FSSSAWRTDSPA*SKAAKSPGLSL
Trigger: GAGACTGAGCCCAGGGGACTTCGCCGCCTTGCTGCACGCGGGGCTGTCCGTGCGCCAAGCACTGCTGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530807.5
ENST00000642871.1
CDS CCA 72 bp CTCGGCAAGGCGTGGAAGCAAGACCCGCTCCTGACATaGTCCAGCAGGGCAGCCAGGACGCCGCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: LGKAWKQDPLLT*SSRAARTPPAL
Trigger: CAGTGCTGGCGGCGTCCTGGCTGCCCTGCTGGACCATGTCAGGAGCGGGTCTTGCTTCCACGCCTTGCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000526658.1
ENST00000643598.1
ENST00000644877.1
ENST00000645411.3
CDS CAA 90 bp GAGACCAGGGACGCCATACTCAGCTCCCAGCGTGCTCAGTGGGTGTaGCTGTGGCCAAGGCCCAGTGCTTCTGGGCTGGCTGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: ETRDAILSSQRAQWV*LWPRPSASGLAEGG
Trigger: GCCGCCCTCAGCCAGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCACGCTGGGAGCTGAGTATGGCGTCCCTGGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS TCA 72 bp CAACCGCGAGTGCCACGTAGAGACCAGCGAAGGCCGTaGGCGCGGAGGCCAGGTTCAGCAGCAGTGCTTGGC +
Preference number: 6 (lower is better)
Translates to: QPRVPRRDQRRP*ARRPGSAAVLG
Trigger: GCCAAGCACTGCTGCTGAACCTGGCCTCCGCGCTCACGGCCTTCGCTGGTCTCTACGTGGCACTCGCGGTTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS TCA 72 bp GCTCCCGGCCCAGAGCAGCCCCTCCCCTCGCCATCCTaGCCATGTCGCAGAGTGCTACGTAGAGGAACAGGC +
Preference number: 6 (lower is better)
Translates to: APGPEQPLPSPS*PCRRVLRRGTG
Trigger: GCCTGTTCCTCTACGTAGCACTCTGCGACATGGTCAGGATGGCGAGGGGAGGGGCTGCTCTGGGCCGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp TGGCCACTGCCAGGATCCAGGCCTCGCTCTCCTCGCTaGCTCCAACCGCGAGTGCCACGTAGAGACCAGCGA +
Preference number: 6 (lower is better)
Translates to: WPLPGSRPRSPR*LQPRVPRRDQR
Trigger: TCGCTGGTCTCTACGTGGCACTCGCGGTTGGAGTCAGCGAGGAGAGCGAGGCCTGGATCCTGGCAGTGGCCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 72 bp GCAGAGTGCTACGTAGAGGAACAGGCCGGTGGCCACTaGCAGGATCCAGGCCTCGCTCTCCTCGCTGACTCC +
Preference number: 6 (lower is better)
Translates to: AECYVEEQAGGH*QDPGLALLADS
Trigger: GGAGTCAGCGAGGAGAGCGAGGCCTGGATCCTGGCAGTGGCCACCGGCCTGTTCCTCTACGTAGCACTCTGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000527148.5
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643303.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS GCA 72 bp AGCCCCTCCCCTCGCCATCCTGACCATGTCGCAGAGTaGTACGTAGAGGAACAGGCCGGTGGCCACTGCCAG +
Preference number: 6 (lower is better)
Translates to: SPSPRHPDHVAE*YVEEQAGGHCQ
Trigger: CTGGCAGTGGCCACCGGCCTGTTCCTCTACGTAGCACTCTGCGACATGGTCAGGATGGCGAGGGGAGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS GCA 72 bp TCTACGCAGGCCTTTCCACACGGCCCGTTGGCGCAGTaGACACGGTCCGCCAGCGTATTTAACAGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: STQAFPHGPLAQ*TRSASVFNRPP
Trigger: GGGCGGCCTGTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGGCCTGCGTAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526658.1
ENST00000644877.1
CDS CCA 72 bp CCGTACTTTCAACATCGCCGGGAGCTGAGGAGCAAGTaGGCACCGGGTCAGCGCCCCTGCTCAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PYFQHRRELRSK*APGQRPCSAPL
Trigger: CAGAGGAGCTGAGCAGGGGCGCTGACCCGGTGCCCACTTGCTCCTCAGCTCCCGGCGATGTTGAAAGTACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp GCCCGTCGGCGAAGTTGTGCACGGCGTCGCCCAGAGTaGTCATATAGGGCAGTAGCCTCAACTCTGCGGGCG +
Preference number: 6 (lower is better)
Translates to: ARRRSCARRRPE*SYRAVASTLRA
Trigger: CGCCCGCAGAGTTGAGGCTACTGCCCTATATGATCACTCTGGGCGACGCCGTGCACAACTTCGCCGACGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531013.1
ENST00000645427.1
CDS GCA 72 bp ACAGACAGGCACTTTCCACACGGCCCGTTGGCGCAGTaGACACGGTCCGCCAGCGTATTTAACAGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: TDRHFPHGPLAQ*TRSASVFNRPP
Trigger: GGGCGGCCTGTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGTGCCTGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS GCA 72 bp GTGGGCTGTGGGCTGAGGCCCTCTTCGCTGTGTGTATaGAGCCCCAGCACCTTGGGCGTCAGATGCAGGACA +
Preference number: 6 (lower is better)
Translates to: VGCGLRPSSLCV*SPSTLGVRCRT
Trigger: TGTCCTGCATCTGACGCCCAAGGTGCTGGGGCTGCATACACACAGCGAAGAGGGCCTCAGCCCACAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CAA 72 bp GACGCCATACTCAGCTCCCAGCGTGCTCAGTGGGTGTaGCTGTGGCCAAGGCCCAGTGCTTCTGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: DAILSSQRAQWV*LWPRPSASGLA
Trigger: AGCCAGCCCAGAAGCACTGGGCCTTGGCCACAGCAACACCCACTGAGCACGCTGGGAGCTGAGTATGGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645411.3
CDS TCA 72 bp GGGGAGAAGGCAGTGCCGCAATTGTCCTTTCTCAGCTaGGGGCCCTTCCCACCCAGCAAGGAGAGCACAGCC +
Preference number: 6 (lower is better)
Translates to: GEKAVPQLSFLS*GPFPPSKESTA
Trigger: GGCTGTGCTCTCCTTGCTGGGTGGGAAGGGCCCTCAGCTGAGAAAGGACAATTGCGGCACTGCCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS GCA 72 bp CTCCGGGGTCACCCCAGCCTGTTCCGACAGTCCATATaGAGCCATCACGTCCCTGGCACTCAGGCATACCGT +
Preference number: 6 (lower is better)
Translates to: LRGHPSLFRQSI*SHHVPGTQAYR
Trigger: ACGGTATGCCTGAGTGCCAGGGACGTGATGGCTGCATATGGACTGTCGGAACAGGCTGGGGTGACCCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS GCA 72 bp TCCTGGCTTCGAGGCACCCCGATGGGGAGAAGGCAGTaGCGCAATTGTCCTTTCTCAGCTGAGGGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: SWLRGTPMGRRQ*RNCPFSAEGPS
Trigger: GGAAGGGCCCTCAGCTGAGAAAGGACAATTGCGGCACTGCCTTCTCCCCATCGGGGTGCCTCGAAGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp CCTCAGAGTCAGAAGAGGCTGGCGTCCCAGGAACCGTaGGCTGCCACACACTCTGGTCTGACGATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PQSQKRLASQEP*AATHSGLTISR
Trigger: CCTGGAGATCGTCAGACCAGAGTGTGTGGCAGCCCACGGTTCCTGGGACGCCAGCCTCTTCTGACTCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CAA 72 bp GCGTCCTCCACAGACAGGCACTTTCCACACGGCCCGTaGGCGCAGTGCACACGGTCCGCCAGCGTATTTAAC +
Preference number: 6 (lower is better)
Translates to: ASSTDRHFPHGP*AQCTRSASVFN
Trigger: GTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGTGCCTGTCTGTGGAGGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS GCA 72 bp GAGTCAGAAGAGGCTGGCGTCCCAGGAACCGTGGGCTaGCACACACTCTGGTCTGACGATCTCCAGGTTTGC +
Preference number: 6 (lower is better)
Translates to: ESEEAGVPGTVG*HTLWSDDLQVC
Trigger: GCAAACCTGGAGATCGTCAGACCAGAGTGTGTGGCAGCCCACGGTTCCTGGGACGCCAGCCTCTTCTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp CGTCCTCCACAGACAGGCACTTTCCACACGGCCCGTTaGCGCAGTGCACACGGTCCGCCAGCGTATTTAACA +
Preference number: 6 (lower is better)
Translates to: RPPQTGTFHTAR*RSAHGPPAYLT
Trigger: TGTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGTGCCTGTCTGTGGAGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301305.8
ENST00000645411.3
CDS CCA 72 bp CCTGAGTGCAGCTCTCCTGGCTTCGAGGCACCCCGATaGGGAGAAGGCAGTGCCGCAATTGTCCTTTCTCAG +
Preference number: 6 (lower is better)
Translates to: PECSSPGFEAPR*GEGSAAIVLSQ
Trigger: CTGAGAAAGGACAATTGCGGCACTGCCTTCTCCCCATCGGGGTGCCTCGAAGCCAGGAGAGCTGCACTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp CTGCTGTGCTGCTGGAACACAAAGTCCACGAAGTACTaGGGGCTCGGCAAGGCGTGGAAGCAAGACCCGCTC +
Preference number: 6 (lower is better)
Translates to: LLCCWNTKSTKY*GLGKAWKQDPL
Trigger: GAGCGGGTCTTGCTTCCACGCCTTGCCGAGCCCTCAGTACTTCGTGGACTTTGTGTTCCAGCAGCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000526658.1
ENST00000643598.1
ENST00000644877.1
ENST00000645411.3
CDS CCA 72 bp CCTGTTCCGACAGTCCATATGCAGCCATCACGTCCCTaGCACTCAGGCATACCGTGTCCCACACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: PVPTVHMQPSRP*HSGIPCPTHWS
Trigger: GCTCCAGTGTGTGGGACACGGTATGCCTGAGTGCCAGGGACGTGATGGCTGCATATGGACTGTCGGAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000643598.1
ENST00000645411.3
CDS CCA 72 bp GAGGGATATCTACGCAGGCCTTTCCACACGGCCCGTTaGCGCAGTGCACACGGTCCGCCAGCGTATTTAACA +
Preference number: 6 (lower is better)
Translates to: EGYLRRPFHTAR*RSAHGPPAYLT
Trigger: TGTTAAATACGCTGGCGGACCGTGTGCACTGCGCCAACGGGCCGTGTGGAAAGGCCTGCGTAGATATCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526658.1
ENST00000644877.1
CDS GCA 72 bp AGCAAGTTTGATTCCTGTTTGGGGACAGGTCCCACCTaGTGCCCACACACCCGGGTGAATTTCCCTGACCCC +
Preference number: 6 (lower is better)
Translates to: SKFDSCLGTGPT*CPHTRVNFPDP
Trigger: GGGGTCAGGGAAATTCACCCGGGTGTGTGGGCAGCAGGTGGGACCTGTCCCCAAACAGGAATCAAACTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp GTCAAAGGTGGGGGACTAGGGCAGGGTATCAGAAGGTaGTGTCATCCTCGTACAGGGACAGCAGCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: VKGGGLGQGIRR*CHPRTGTAAAG
Trigger: TCCTGCTGCTGCTGTCCCTGTACGAGGATGACATCACCTTCTGATACCCTGCCCTAGTCCCCCACCTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000276833.9
ENST00000301305.8
ENST00000529462.5
ENST00000530807.5
ENST00000531013.1
ENST00000532718.5
ENST00000642871.1
ENST00000643027.1
ENST00000643598.1
ENST00000644497.1
ENST00000645411.3
ENST00000645427.1
CDS TCA 72 bp CCGTCCCCCAGCCCAACACCTATAAAGGGTCTGTGCTaGGGAGTCGTAAAGAGGGAGGCCTCTTTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: PSPSPTPIKGLC*GVVKREASLQL
Trigger: CAACTGCAAAGAGGCCTCCCTCTTTACGACTCCTCAGCACAGACCCTTTATAGGTGTTGGGCTGGGGGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp CGTCCCAGGAACCGTGGGCTGCCACACACTCTGGTCTaGCGATCTCCAGGTTTGCTTTCCATGACAGAGAAA +
Preference number: 6 (lower is better)
Translates to: RPRNRGLPHTLV*RSPGLLSMTEK
Trigger: TTTCTCTGTCATGGAAAGCAAACCTGGAGATCGTCAGACCAGAGTGTGTGGCAGCCCACGGTTCCTGGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp CCACCTGATGAGAAATACTCACAGGTGTGGAGGGGCTaGCTCCCTTCAAAAATTAGCCAGGGTGGTGGCGCA +
Preference number: 6 (lower is better)
Translates to: PPDEKYSQVWRG*LPSKISQGGGA
Trigger: TGCGCCACCACCCTGGCTAATTTTTGAAGGGAGCCAGCCCCTCCACACCTGTGAGTATTTCTCATCAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529462.5
CDS CCA 72 bp CCACCTGATGAGAAATACTCACACGTGTGGAGGGGCTaGCTCCCTTCAAAAATTAGCCAGGGTGGTGGCGCA +
Preference number: 6 (lower is better)
Translates to: PPDEKYSHVWRG*LPSKISQGGGA
Trigger: TGCGCCACCACCCTGGCTAATTTTTGAAGGGAGCCAGCCCCTCCACACGTGTGAGTATTTCTCATCAGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643027.1
CDS CCA 72 bp CTCCAAGGACAAGAGTGTCTTTACTGGAGTTGGGACTaGGGCCTCTATAGGGGCTTCTGGTTTCTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: LQGQECLYWSWD*GLYRGFWFLGC
Trigger: ACAGCCCAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp GCCATGCTCCAAGGACAAGAGTGTCTTTACTGGAGTTaGGACTGGGGCCTCTATAGGGGCTTCTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: AMLQGQECLYWS*DWGLYRGFWFL
Trigger: CAGAAACCAGAAGCCCCTATAGAGGCCCCAGTCCCAACTCCAGTAAAGACACTCTTGTCCTTGGAGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp GGGGAGGGAAGGTCATGTGAAGACAAAGGCAGGGATTaGAGTCATACTGCCCACAAACCAAGGAACACCTGG +
Preference number: 6 (lower is better)
Translates to: GEGRSCEDKGRD*SHTAHKPRNTW
Trigger: CCAGGTGTTCCTTGGTTTGTGGGCAGTATGACTCCAATCCCTGCCTTTGTCTTCACATGACCTTCCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529462.5
CDS TCA 72 bp CATGATACAGATTCCTTTGCTCACATGTTTCCGCGCTaGCCTTCTCCCCACTTGTTGCCCTGCTACACTCCC +
Preference number: 6 (lower is better)
Translates to: HDTDSFAHMFPR*PSPHLLPCYTP
Trigger: GGGAGTGTAGCAGGGCAACAAGTGGGGAGAAGGTCAGCGCGGAAACATGTGAGCAAAGGAATCTGTATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CCA 72 bp TGGGAGGGAAGGTCATGTGAAGACAAAGGCAGGGATTaGAGTCATACTGCCCACAAACCAAGGAACACCTGG +
Preference number: 6 (lower is better)
Translates to: WEGRSCEDKGRD*SHTAHKPRNTW
Trigger: CCAGGTGTTCCTTGGTTTGTGGGCAGTATGACTCCAATCCCTGCCTTTGTCTTCACATGACCTTCCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643027.1
CDS CCA 72 bp TCTCTCGTCCCACCTGATGAGAAATACTCACACGTGTaGAGGGGCTGGCTCCCTTCAAAAATTAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: SLVPPDEKYSHV*RGWLPSKISQG
Trigger: ACCCTGGCTAATTTTTGAAGGGAGCCAGCCCCTCCACACGTGTGAGTATTTCTCATCAGGTGGGACGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643027.1
CDS TCA 72 bp AGAGACTTCAGAGAGAGCATTGCTCTCCTGACACTTTaGTTCCTAACTTTCAGCCTCCAGAACTGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: RDFRESIALLTL*FLTFSLQNCEN
Trigger: ATTCTCACAGTTCTGGAGGCTGAAAGTTAGGAATCAAAGTGTCAGGAGAGCAATGCTCTCTCTGAAGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CAA 72 bp TTAGCCTACGTGCACATCCGGGCACAGTACCTTTCCTaGAACTTATTCATGATACAGATTCCTTTGCTCACA +
Preference number: 6 (lower is better)
Translates to: LAYVHIRAQYLS*NLFMIQIPLLT
Trigger: TGTGAGCAAAGGAATCTGTATCATGAATAAGTTCAAGGAAAGGTACTGTGCCCGGATGTGCACGTAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CAA 90 bp AACATAAATTTAGCCTACGTGCACATCCGGGCACAGTACCTTTCCTaGAACTTATTCATGATACAGATTCCTTTGCTCACATGTTTCCGC +
Preference number: 6 (lower is better)
Translates to: NINLAYVHIRAQYLS*NLFMIQIPLLTCFR
Trigger: GCGGAAACATGTGAGCAAAGGAATCTGTATCATGAATAAGTTCAAGGAAAGGTACTGTGCCCGGATGTGCACGTAGGCTAAATTTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS TCA 72 bp CTGGCAGCAATACTGCTCTGTTACTCTTTCCTACACTaGGATGTTTGGGTAAAGAGAAACATAAATCTAGCG +
Preference number: 6 (lower is better)
Translates to: LAAILLCYSFLH*DVWVKRNINLA
Trigger: CGCTAGATTTATGTTTCTCTTTACCCAAACATCTCAGTGTAGGAAAGAGTAACAGAGCAGTATTGCTGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CAA 72 bp GCTGCTGCTCTGTTACTCTTTGCTACAATGACATGTTaGGGTAAAGAGAAACATAAATTTAGCCTACGTGCA +
Preference number: 6 (lower is better)
Translates to: AAALLLFATMTC*GKEKHKFSLRA
Trigger: TGCACGTAGGCTAAATTTATGTTTCTCTTTACCCAAACATGTCATTGTAGCAAAGAGTAACAGAGCAGCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1
CDS CAA 72 bp AATACTGCTCTGTTACTCTTTCCTACACTGAGATGTTaGGGTAAAGAGAAACATAAATCTAGCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: NTALLLFPTLRC*GKEKHKSSAAA
Trigger: AGCAGCAGCGCTAGATTTATGTTTCTCTTTACCCAAACATCTCAGTGTAGGAAAGAGTAACAGAGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529462.5
ENST00000643027.1