RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141873

Ensembl transcript IDs: ENST00000269740.9, ENST00000455372.2, ENST00000545664.5, ENST00000589166.1, ENST00000589363.5, ENST00000590875.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACGGCAGTCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATaGGGCGTGCGGAGCAGGGGCTGGAAGCTCAGGGAGCCACCCTGG +
Preference number: 1 (lower is better)
Translates to: HGSPSPTHTRGEGRA*GVRSRGWKLREPPW
Trigger: CCAGGGTGGCTCCCTGAGCTTCCAGCCCCTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGACTGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp GAGTCCACCTCCTGGTGGCTGTGGACTGAGGCCCCGTGTCCTGGCTaGCTGTTGGCGGGGATGGCTCTTGGCACCGAGAGGCTGCCCTCG +
Preference number: 1 (lower is better)
Translates to: ESTSWWLWTEAPCPG*LLAGMALGTERLPS
Trigger: CGAGGGCAGCCTCTCGGTGCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGAGGTGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp GCAGTGGGTGAGGCTGGGGGCTCGGGAGTAGGGACCTCATCCGCCTaGCCAGCCCGAGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCC +
Preference number: 1 (lower is better)
Translates to: AVGEAGGSGVGTSSA*PARGQENGGKGLGA
Trigger: GGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAGCCCCCAGCCTCACCCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp AGCTCACTGGAGGTCGGAAGAGTCCACCTCCTGGTGGCTGTGGACTaGGGCCCCGTGTCCTGGCTGGCTGTTGGCGGGGATGGCTCTTGG +
Preference number: 1 (lower is better)
Translates to: SSLEVGRVHLLVAVD*GPVSWLAVGGDGSW
Trigger: CCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGAGGTGGACTCTTCCGACCTCCAGTGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp GGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCTaGCACACCCTGGCTTTTTGCTTCTCCAAGGCCAGCAGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: GTERLPSGPRFMPFS*HTLAFCFSKASRRV
Trigger: CACCCTCCTGCTGGCCTTGGAGAAGCAAAAAGCCAGGGTGTGCCAGGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp AGGGTCCTCTTCCAAGCTCACTGGAGGTCGGAAGAGTCCACCTCCTaGTGGCTGTGGACTGAGGCCCCGTGTCCTGGCTGGCTGTTGGCG +
Preference number: 1 (lower is better)
Translates to: RVLFQAHWRSEESTS*WLWTEAPCPGWLLA
Trigger: CGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGAGGTGGACTCTTCCGACCTCCAGTGAGCTTGGAAGAGGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp GACCAGCCCGAGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATaGGAAGGCCACTGTGATGAGGGGGAGGGAAGAGCAAGCTCCCCG +
Preference number: 1 (lower is better)
Translates to: DQPEDRRTAGKVWVP*EGHCDEGEGRASSP
Trigger: CGGGGAGCTTGCTCTTCCCTCCCCCTCATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCTCGGGCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp TGGCCAGGGCTGGTCACACTGTGGCCTGACAGGGGACCCACACTCTaGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGA +
Preference number: 1 (lower is better)
Translates to: WPGLVTLWPDRGPTL*AADMGELKEQVSRG
Trigger: TCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCACAGTGTGACCAGCCCTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR GCA 90 bp GAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCTCTGAGGGCTaGCCCAGCCAACAGACACTGACAAACAGACACCTTCGGTCTGAC +
Preference number: 1 (lower is better)
Translates to: ELIMLGRSTWPGSEG*PSQQTLTNRHLRSD
Trigger: GTCAGACCGAAGGTGTCTGTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR GCA 90 bp GCGCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTaGTGGGATTCTGACATAATGGCAGGAGTGACACGCACGGCAGTC +
Preference number: 1 (lower is better)
Translates to: ALTDLGRSSQLQHPL*WDSDIMAGVTRTAV
Trigger: GACTGCCGTGCGTGTCACTCCTGCCATTATGTCAGAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp TCACACTGTGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATaGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: SHCGLTGDPHSGLLI*GSSRNRSAEDDAVR
Trigger: CCTGACAGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCACAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp AGACAGACGTTGATCAGGAGAGATGAGGCAGATGCACGGGAGCTGTaGACCAGGCACCATTTTCCAGGGGTGACTGAGAGCCTGGCCCTG +
Preference number: 1 (lower is better)
Translates to: RQTLIRRDEADAREL*TRHHFPGVTESLAL
Trigger: CAGGGCCAGGCTCTCAGTCACCCCTGGAAAATGGTGCCTGGTTCACAGCTCCCGTGCATCTGCCTCATCTCTCCTGATCAACGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp CTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTaGGATTCTGACATAATGGCAGGAGTGACACGCACGGCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: LTDLGRSSQLQHPLC*DSDIMAGVTRTAVP
Trigger: TGGGACTGCCGTGCGTGTCACTCCTGCCATTATGTCAGAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp CACCGGCTGGAGGCCTCATGCATGCCTCGCTTGAGGACAAGCTCATaGGGAACTCTAGCTACTCCCAAGAGACAGACGTTGATCAGGAGA +
Preference number: 1 (lower is better)
Translates to: HRLEASCMPRLRTSS*GTLATPKRQTLIRR
Trigger: TCTCCTGATCAACGTCTGTCTCTTGGGAGTAGCTAGAGTTCCTCATGAGCTTGTCCTCAAGCGAGGCATGCATGAGGCCTCCAGCCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp AGCCCCTGCCTCTTGACAGCCATACCCTGTGAGGTCCTGGCCACTTaGGTATGGGAAGGACTTGAACTTGCTTCTAACCAGCAGGACACT +
Preference number: 1 (lower is better)
Translates to: SPCLLTAIPCEVLAT*VWEGLELASNQQDT
Trigger: AGTGTCCTGCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTCACAGGGTATGGCTGTCAAGAGGCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp GAGGCCATGCTTTCCAGCTTCAGGACAGAGTGTGCCCTACCTAGGTaGGTAGTCTGGTCTGATTATCAGGTGACAACCGACAAGTCCACC +
Preference number: 1 (lower is better)
Translates to: EAMLSSFRTECALPR*VVWSDYQVTTDKST
Trigger: GGTGGACTTGTCGGTTGTCACCTGATAATCAGACCAGACTACCCACCTAGGTAGGGCACACTCTGTCCTGAAGCTGGAAAGCATGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp AGGAACTCTAGCTACTCCCAAGAGACAGACGTTGATCAGGAGAGATaGGGCAGATGCACGGGAGCTGTGAACCAGGCACCATTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: RNSSYSQETDVDQER*GRCTGAVNQAPFSR
Trigger: CCTGGAAAATGGTGCCTGGTTCACAGCTCCCGTGCATCTGCCTCATCTCTCCTGATCAACGTCTGTCTCTTGGGAGTAGCTAGAGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp GTAGTCTGGTCTGATTATCAGGTGACAACCGACAAGTCCACCTGTTaGGAATCCCAGGTCTGGTCCAAACCCCTTGTTTGGCCGGTAGAG +
Preference number: 1 (lower is better)
Translates to: VVWSDYQVTTDKSTC*ESQVWSKPLVWPVE
Trigger: CTCTACCGGCCAAACAAGGGGTTTGGACCAGACCTGGGATTCCCAACAGGTGGACTTGTCGGTTGTCACCTGATAATCAGACCAGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 90 bp GGGAGCCACCCTGGAACTCTACTCTGCCACACTAACAGGCTCAGATaGTTTAATCCCAGACAACAGCCCTTCTCCTCCTTTCTGGACACT +
Preference number: 1 (lower is better)
Translates to: GSHPGTLLCHTNRLR*FNPRQQPFSSFLDT
Trigger: AGTGTCCAGAAAGGAGGAGAAGGGCTGTTGTCTGGGATTAAATCATCTGAGCCTGTTAGTGTGGCAGAGTAGAGTTCCAGGGTGGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp CTTTCCAGCTTCAGGACAGAGTGTGCCCTACCTAGGTGGGTAGTCTaGTCTGATTATCAGGTGACAACCGACAAGTCCACCTGTTGGGAA +
Preference number: 1 (lower is better)
Translates to: LSSFRTECALPRWVV*SDYQVTTDKSTCWE
Trigger: TTCCCAACAGGTGGACTTGTCGGTTGTCACCTGATAATCAGACCAGACTACCCACCTAGGTAGGGCACACTCTGTCCTGAAGCTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 90 bp CCTCTGCATGACATGGGACTGTGCCCTCTGTCTTACACAGAGTCATaGCCATCTTCTCCATTTGCTGATGAAGGAACTGATCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: PLHDMGLCPLSYTES*PSSPFADEGTDHAG
Trigger: CCCAGCATGATCAGTTCCTTCATCAGCAAATGGAGAAGATGGCCATGACTCTGTGTAAGACAGAGGGCACAGTCCCATGTCATGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp CTCGGGAGTAGGGACCTCATCCGCCTGACCAGCCCGAGGACAGGAGAACGGCGGGTGACTGCTGCCTTGTaGGCTCCTGAAGCAGTGCCC +
Preference number: 2 (lower is better)
Translates to: LGSRDLIRLTSPRTGERRVTAAL*APEAVP
Trigger: GGGCACTGCTTCAGGAGCTCACAAGGCAGCAGTCAC...CCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACTGGGGAGGTCCACGTaGCCAGGCTCTGAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: WPDRGPTLWAADMGELKELGRST*PGSEGC
Trigger: GCAGCCCTCAGAGCCTGGCCACGTGGACCTCCCCAG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGCTCAGGGAGCCACCCTaGAACTCTACTCTGCCACAC +
Preference number: 2 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQLREPP*NSTLPH
Trigger: GTGTGGCAGAGTAGAGTTCCAGGGTGGCTCCCTGAG...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR GCA 90 bp CTCGGGAGTAGGGACCTCATCCGCCTGACCAGCCCGAGGACAGGAGAACGGCGGCACACCCTGGCTTTTTaGTTCTCCAAGGCCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGSRDLIRLTSPRTGERRHTLAF*FSKASR
Trigger: CCTGCTGGCCTTGGAGAAGCAAAAAGCCAGGGTGTG...CCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp ATGGCTCTTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCGGACAGACTCCAAGATaGCCCCAGAAGCCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: MALGTERLPSGPRFMPFSGQTPR*PQKPLP
Trigger: AGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCC...GGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGTGTCACATCTGGCACTaGCCCAGAGAGAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQCHIWH*PRERKP
Trigger: TGGCTTCCTCTCTCTGGGCCAGTGCCAGATGTGACA...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CTCGGGAGTAGGGACCTCATCCGCCTGACCAGCCCGAGGACAGGAGAACGGCGGCTTCCATGCTTTCGTTaGGAGGAAGAACAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: LGSRDLIRLTSPRTGERRLPCFR*EEEQGV
Trigger: GACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAG...CCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCAGGTGCGGGCTAGCTaGGCCCTACGCTCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMQVRAS*ALRSRS
Trigger: AGACCTGGAGCGTAGGGCCCAGCTAGCCCGCACCTG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGATGCCTTGTGAGCTCCTaGAGCAGTGCCCAGACCCCT +
Preference number: 2 (lower is better)
Translates to: GPTLWAADMGELKEQVSRCLVSS*SSAQTP
Trigger: AGGGGTCTGGGCACTGCTTCAGGAGCTCACAAGGCA...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp GCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCGCCCAGGAGACACTGTaGCTGCTGCCTTGTGAGCTC +
Preference number: 2 (lower is better)
Translates to: ANRSGAVITAATSPLLGFAQETL*LLPCEL
Trigger: GAGCTCACAAGGCAGCAGTCACAGTGTCTCCTGGGC...GAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGGGTCACACTGTGGCCTaGCAGGGGACCCACACTCTG +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMGHTVA*QGTHTL
Trigger: CAGAGTGTGGGTCCCCTGTCAGGCCACAGTGTGACC...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGAGGCCAGCAGGAGGGTaGGTGGCTCACCTGATTAGG +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMRPAGG*VAHLIR
Trigger: CCTAATCAGGTGAGCCACTCACCCTCCTGCTGGCCT...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACTGGGAATCCCAGGTCTaGTCCAAACCCCTTGTTTGG +
Preference number: 2 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNWESQV*SKPLVW
Trigger: CCAAACAAGGGGTTTGGACCAGACCTGGGATTCCCA...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGTGTCAGGAGTTGGGGTaGACAGACTCCAAGATGGCC +
Preference number: 2 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGCQELG*TDSKMA
Trigger: GGCCATCTTGGAGTCTGTCCACCCCAACTCCTGACA...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCGAGGTCCTGGCCACTTaGGTATGGGAAGGACTTGAA +
Preference number: 2 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPEVLAT*VWEGLE
Trigger: TTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTC...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGGATGCTGTCAGGAGTTaGGGTGGACAGACTCCAAGA +
Preference number: 2 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGDAVRS*GGQTPR
Trigger: TCTTGGAGTCTGTCCACCCCAACTCCTGACAGCATC...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCGGGCTGGTCACACTGTaGCCTGACAGGGGACCCACA +
Preference number: 2 (lower is better)
Translates to: LRASMLSLGGRTGGPHISGLVTL*PDRGPT
Trigger: TGTGGGTCCCCTGTCAGGCCACAGTGTGACCAGCCC...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGAAGCATGGCCAGGGCTaGTCACACTGTGGCCTGACA +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMKHGQG*SHCGLT
Trigger: TGTCAGGCCACAGTGTGACCAGCCCTGGCCATGCTT...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 90 bp CAGCCATACCCTGTGAGGTCCTGGCCACTTGAGTATGGGAAGGACTaGAACTTGCTTCTAACCAGCAGGACACTGGGGCAGAGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QPYPVRSWPLEYGKD*NLLLTSRTLGQRGR
Trigger: CCTTCCCCTCTGCCCCAGTGTCCTGCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTCACAGGGTATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCAGTGCCCAGACCCCTaGCTCACAGAAACTGTGAGA +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMQCPDP*LTETVR
Trigger: TCTCACAGTTTCTGTGAGTCAGGGGTCTGGGCACTG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGACAGCCATACCCTGTaGGGTCCTGGCCACTTGAGT +
Preference number: 2 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDADSHTL*GPGHLS
Trigger: ACTCAAGTGGCCAGGACCTCACAGGGTATGGCTGTC...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR GCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGCCAGGCTCTGAGGGCTaGCCCAGCCAACAGACACTG +
Preference number: 2 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPPGSEG*PSQQTL
Trigger: CAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGG...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR GCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCCATGACATGGGACTGTaGCCTCTGTCTTACACAGAG +
Preference number: 2 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPHDMGL*PLSYTE
Trigger: CTCTGTGTAAGACAGAGGGCACAGTCCCATGTCATG...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 90 bp TACCCTGTGAGGTCCTGGCCACTTGAGTATGGGAAGGACTTGAACTaGCTTCTAACCAGCAGGACACTGGGGCAGAGGGGAAGGGATACC +
Preference number: 2 (lower is better)
Translates to: YPVRSWPLEYGKDLN*LLTSRTLGQRGRDT
Trigger: GGTATCCCTTCCCCTCTGCCCCAGTGTCCTGCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTCACAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR GCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGTCTGTAGTCCTAAGGTaGTCAGTTTGCTATAATTTG +
Preference number: 2 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQSVVLR*SVCYNL
Trigger: CAAATTATAGCAAACTGAGCACCTTAGGACTACAGA...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACCTAGGTGGGTAGTCTaGTCTGATTATCAGGTGACA +
Preference number: 2 (lower is better)
Translates to: WPDRGPTLWAADMGELKEPRWVV*SDYQVT
Trigger: TGTCACCTGATAATCAGACCAGACTACCCACCTAGG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp GCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCATTCAATGTCACATCTaGCACTGGCCCAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: ANRSGAVITAATSPLLGFIQCHI*HWPRER
Trigger: CCTCTCTCTGGGCCAGTGCCAGATGTGACATTGAAT...GAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCGTGGGTAGTCTGGTCTaGTTATCAGGTGACAACCGA +
Preference number: 2 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGVGSLV*LSGDNR
Trigger: TCGGTTGTCACCTGATAATCAGACCAGACTACCCAC...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR GCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGTCTCCATCCTCGCAGTaGAGATGTCAGTCTTCACAC +
Preference number: 2 (lower is better)
Translates to: RTGERRERFGCHEKATVMSPSSQ*RCQSSH
Trigger: GTGTGAAGACTGACATCTGCACTGCGAGGATGGAGA...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 90 bp GACTGTGCCCTCTGTCTTACACAGAGTCATGGCCATCTTCTCCATTaGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCA +
Preference number: 2 (lower is better)
Translates to: DCALCLTQSHGHLLH*LMKELIMLGRSTWP
Trigger: TGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAGAAGATGGCCATGACTCTGTGTAAGACAGAGGGCACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTCGGTCTGACAACCAATaGGGAACTGAACCTGGCTTA +
Preference number: 2 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDARSDNQ*GTEPGL
Trigger: TAAGCCAGGTTCAGTTCCTCATTGGTTGTCAGACCG...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGGACAAGTCCACCTGTTaGGAATCCCAGGTCTGGTCC +
Preference number: 2 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPDKSTC*ESQVWS
Trigger: GGACCAGACCTGGGATTCCCAACAGGTGGACTTGTC...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGTCTTACACAGAGTCATaGCCATCTTCTCCATTTGCT +
Preference number: 2 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGSYTES*PSSPFA
Trigger: AGCAAATGGAGAAGATGGCCATGACTCTGTGTAAGA...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGCACCTCTGCATGACATaGGACTGTGCCCTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPHLCMT*DCALCL
Trigger: AAGACAGAGGGCACAGTCCCATGTCATGCAGAGGTG...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 90 bp CAAGTCCACCTGTTGGGAATCCCAGGTCTGGTCCAAACCCCTTGTTaGGCCGGTAGAGCACAGAGACAGAAAGTAACCAGTTCACAATCA +
Preference number: 2 (lower is better)
Translates to: QVHLLGIPGLVQTPC*AGRAQRQKVTSSQS
Trigger: TGATTGTGAACTGGTTACTTTCTGTCTCTGTGCTCTACCGGCCAAACAAGGGGTTTGGACCAGACCTGGGATTCCCAACAGGTGGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR TCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGGGTCTGATTATCAGGTaGCAACCGACAAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPGLIIR*QPTSPP
Trigger: AGGTGGACTTGTCGGTTGTCACCTGATAATCAGACC...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCTGTGCCCTACCTAGGTaGGTAGTCTGGTCTGATTAT +
Preference number: 2 (lower is better)
Translates to: LRASMLSLGGRTGGPHISCALPR*VVWSDY
Trigger: ATAATCAGACCAGACTACCCACCTAGGTAGGGCACA...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp GGCTGTGGACTGAGGCCCCGTGTCCTGGCTGGCTGTTaGCGGGGATGGCTCTTGGCACCGAGAGGCTGCCCT +
Preference number: 3 (lower is better)
Translates to: GCGLRPRVLAGC*RGWLLAPRGCP
Trigger: AGGGCAGCCTCTCGGTGCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GAGGCTGGGGGCTCGGGAGTAGGGACCTCATCCGCCTaGCCAGCCCGAGGACAGGAGAACGGCGGGAAAGGT +
Preference number: 3 (lower is better)
Translates to: EAGGSGVGTSSA*PARGQENGGKG
Trigger: ACCTTTCCCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAGCCCCCAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp CCCGTGTCCTGGCTGGCTGTTGGCGGGGATGGCTCTTaGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCAT +
Preference number: 3 (lower is better)
Translates to: PVSWLAVGGDGS*HREAALGSSLH
Trigger: ATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp TCCTGGTGGCTGTGGACTGAGGCCCCGTGTCCTGGCTaGCTGTTGGCGGGGATGGCTCTTGGCACCGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWWLWTEAPCPG*LLAGMALGTER
Trigger: CCTCTCGGTGCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GAGGTCGGAAGAGTCCACCTCCTGGTGGCTGTGGACTaGGGCCCCGTGTCCTGGCTGGCTGTTGGCGGGGAT +
Preference number: 3 (lower is better)
Translates to: EVGRVHLLVAVD*GPVSWLAVGGD
Trigger: ATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGAGGTGGACTCTTCCGACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp CAAGCTCACTGGAGGTCGGAAGAGTCCACCTCCTGGTaGCTGTGGACTGAGGCCCCGTGTCCTGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: QAHWRSEESTSW*LWTEAPCPGWL
Trigger: CAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCACCAGGAGGTGGACTCTTCCGACCTCCAGTGAGCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp GGAACAGCAGGAATGCGGTGTCTCGGCTCTGAACGGTaGAAATCCAGGTGCGGGCTAGCTGGGCCCTACGCT +
Preference number: 3 (lower is better)
Translates to: GTAGMRCLGSER*KSRCGLAGPYA
Trigger: AGCGTAGGGCCCAGCTAGCCCGCACCTGGATTTCCACCGTTCAGAGCCGAGACACCGCATTCCTGCTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GACCACAGCCCAGGAGACACTGTGACTGCTGCCTTGTaGGCTCCTGAAGCAGTGCCCAGACCCCTGACTCAC +
Preference number: 3 (lower is better)
Translates to: DHSPGDTVTAAL*APEAVPRPLTH
Trigger: GTGAGTCAGGGGTCTGGGCACTGCTTCAGGAGCTCACAAGGCAGCAGTCACAGTGTCTCCTGGGCTGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR GCA 72 bp TTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATaGCCTTCTCCTGGCACACCCTGGCTTTTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: LAPRGCPRVLAS*PSPGTPWLFAS
Trigger: AGAAGCAAAAAGCCAGGGTGTGCCAGGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CAA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGCGACAAGTCCACCTGTaGGGAATCCCAGGTCTGGTC +
Preference number: 3 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGRQVHL*GIPGLV
Trigger: GACCAGACCTGGGATTCCCAACAGGTGGACTTGTCG...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp ACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTaGCAGCCATACCCTGTGAGGTCCTGGCCACTTGAG +
Preference number: 3 (lower is better)
Translates to: TDSKMAPEAPAS*QPYPVRSWPLE
Trigger: CTCAAGTGGCCAGGACCTCACAGGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp GGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATaGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGAT +
Preference number: 3 (lower is better)
Translates to: GLTGDPHSGLLI*GSSRNRSAEDD
Trigger: ATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CAA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGGCTTCCATGCTTTCGTaGGGAGGAAGAACAGGGGGT +
Preference number: 3 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGASMLS*GGRTGG
Trigger: ACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGC...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTaGCAAACAGACACCTTCGGTCTGACAACCAATGAG +
Preference number: 3 (lower is better)
Translates to: GQALRAAPANRH*QTDTFGLTTNE
Trigger: CTCATTGGTTGTCAGACCGAAGGTGTCTGTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp CTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTaGGATTCTGACATAATGGCAGGAGTGACACGCACG +
Preference number: 3 (lower is better)
Translates to: LGRSSQLQHPLC*DSDIMAGVTRT
Trigger: CGTGCGTGTCACTCCTGCCATTATGTCAGAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCTaGCATAATGGCAGGAGTGACACGCACGGCAGTCCC +
Preference number: 3 (lower is better)
Translates to: VITAATSPLLGF*HNGRSDTHGSP
Trigger: GGGACTGCCGTGCGTGTCACTCCTGCCATTATGTCAGAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR GCA 72 bp GATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTaGTGGGATTCTGACATAATGGCAGGAGTGACACGC +
Preference number: 3 (lower is better)
Translates to: DLGRSSQLQHPL*WDSDIMAGVTR
Trigger: GCGTGTCACTCCTGCCATTATGTCAGAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CAA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAAGGCCATCTTCTCCATTaGCTGATGAAGGAACTGATC +
Preference number: 3 (lower is better)
Translates to: WPDRGPTLWAADMGELKEGHLLH*LMKELI
Trigger: GATCAGTTCCTTCATCAGCAAATGGAGAAGATGGCC...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR-3UTR CAA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGGAGTATGGGAAGGACTaGAACTTGCTTCTAACCAGC +
Preference number: 3 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGEYGKD*NLLLTS
Trigger: GCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTC...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATaGTGCTGTCAGGAGTTGGGGTGGACAGACTCCAAG +
Preference number: 3 (lower is better)
Translates to: DMGELKEQVSRG*CCQELGWTDSK
Trigger: CTTGGAGTCTGTCCACCCCAACTCCTGACAGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp GAGGCCTCATGCATGCCTCGCTTGAGGACAAGCTCATaGGGAACTCTAGCTACTCCCAAGAGACAGACGTTG +
Preference number: 3 (lower is better)
Translates to: EASCMPRLRTSS*GTLATPKRQTL
Trigger: CAACGTCTGTCTCTTGGGAGTAGCTAGAGTTCCTCATGAGCTTGTCCTCAAGCGAGGCATGCATGAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp GGTTGGGGGATAAGCTTAGGGCTTCCATGCTTTCGTTaGGAGGAAGAACAGGGGGTCCTCATATCTCCACCA +
Preference number: 3 (lower is better)
Translates to: GWGISLGLPCFR*EEEQGVLISPP
Trigger: TGGTGGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAGCTTATCCCCCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp GATTTAATCCCAGACAACAGCCCTTCTCCTCCTTTCTaGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGT +
Preference number: 3 (lower is better)
Translates to: DLIPDNSPSPPF*TLGTRKSRARG
Trigger: ACCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTGTTGTCTGGGATTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR GCA 72 bp AGGGATACCCTGTCACCTCTGCATGACATGGGACTGTaGCCTCTGTCTTACACAGAGTCATGGCCATCTTCT +
Preference number: 3 (lower is better)
Translates to: RDTLSPLHDMGL*PLSYTESWPSS
Trigger: AGAAGATGGCCATGACTCTGTGTAAGACAGAGGGCACAGTCCCATGTCATGCAGAGGTGACAGGGTATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp TTCAGGACAGAGTGTGCCCTACCTAGGTGGGTAGTCTaGTCTGATTATCAGGTGACAACCGACAAGTCCACC +
Preference number: 3 (lower is better)
Translates to: FRTECALPRWVV*SDYQVTTDKST
Trigger: GGTGGACTTGTCGGTTGTCACCTGATAATCAGACCAGACTACCCACCTAGGTAGGGCACACTCTGTCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp CTTTCCAGCTTCAGGACAGAGTGTGCCCTACCTAGGTaGGTAGTCTGGTCTGATTATCAGGTGACAACCGAC +
Preference number: 3 (lower is better)
Translates to: LSSFRTECALPR*VVWSDYQVTTD
Trigger: GTCGGTTGTCACCTGATAATCAGACCAGACTACCCACCTAGGTAGGGCACACTCTGTCCTGAAGCTGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp CTCTTGACAGCCATACCCTGTGAGGTCCTGGCCACTTaGGTATGGGAAGGACTTGAACTTGCTTCTAACCAG +
Preference number: 3 (lower is better)
Translates to: LLTAIPCEVLAT*VWEGLELASNQ
Trigger: CTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTCACAGGGTATGGCTGTCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CCA 72 bp TCTGATTATCAGGTGACAACCGACAAGTCCACCTGTTaGGAATCCCAGGTCTGGTCCAAACCCCTTGTTTGG +
Preference number: 3 (lower is better)
Translates to: SDYQVTTDKSTC*ESQVWSKPLVW
Trigger: CCAAACAAGGGGTTTGGACCAGACCTGGGATTCCCAACAGGTGGACTTGTCGGTTGTCACCTGATAATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR TCA 72 bp CCTGGAACTCTACTCTGCCACACTAACAGGCTCAGATaGTTTAATCCCAGACAACAGCCCTTCTCCTCCTTT +
Preference number: 3 (lower is better)
Translates to: PGTLLCHTNRLR*FNPRQQPFSSF
Trigger: AAAGGAGGAGAAGGGCTGTTGTCTGGGATTAAATCATCTGAGCCTGTTAGTGTGGCAGAGTAGAGTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCCTCGTCCGCCGACTaGCGCCGCTGCACGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRPSSAD*RRCTPN
Trigger: GTTGGGCGTGCAGCGGCGCCAGTCGGCGGACGAGGG...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCCTGGGGCCGTGGCCGTaGGGCTCCACGTACAGCGCG +
Preference number: 4 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSLGPWP*GSTYSA
Trigger: CGCGCTGTACGTGGAGCCCCACGGCCACGGCCCCAG...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCCACTCCGGGCCATGCTaGTGCCCAGGGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSHSGPC*CPGPRP
Trigger: TGGCCGTGGCCCTGGGCATCAGCATGGCCCGGAGTG...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGCTCAGGCTGGGGCCGTaGCCGTGGGGCTCCACGTAC +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVLRLGP*PWGSTY
Trigger: GTACGTGGAGCCCCACGGCCACGGCCCCAGCCTGAG...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGATCGGGGGCACAGCCTaGTCCCGGGAGGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRIGGTA*SREAPC
Trigger: ACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGAT...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp AGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCAGGCCCAGGCCGATaGCCAGGGGGATCATGGCGC +
Preference number: 4 (lower is better)
Translates to: RATVLALGGRAAGGRGLCPGPGR*PGGSWR
Trigger: GCGCCATGATCCCCCTGGGCATCGGCCTGGGCCTGG...ACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCCCTGGGCGCTCTCAATaGCCAGGCCCAGGCCGATGC +
Preference number: 4 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSPGRSQ*PGPGRC
Trigger: GCATCGGCCTGGGCCTGGGCATTGAGAGCGCCCAGG...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGGCCACCAGTGTCTCGTaGACGGCCACCCCCACGAAC +
Preference number: 4 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRATSVS*TATPTN
Trigger: GTTCGTGGGGGTGGCCGTCCACGAGACACTGGTGGC...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGGCGCGAAGGCCAGGCTaGGCAGGCGCACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVARRPG*AGARGW
Trigger: CCAGCCCCGTGCGCCTGCTCAGCCTGGCCTTCGCGC...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCATGGCGCTTACGGTaGCCGCCAGCTTGGCCGCGT +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVSWRLR*PPAWPR
Trigger: ACGCGGCCAAGCTGGCGGTCACCGTAAGCGCCATGA...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCATACTCCGAGTCGCTaGCCACGTCCGATCCGGCGT +
Preference number: 4 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRHTPSR*PRPIRR
Trigger: ACGCCGGATCGGACGTGGGCAGCGACTCGGAGTATG...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCGGCTTGGGCTGCTCTaGTCACTGCAGGGCCAAACC +
Preference number: 4 (lower is better)
Translates to: WPRATVLALGGRAAGGRGRLGLL*SLQGQT
Trigger: GGTTTGGCCCTGCAGTGACCAGAGCAGCCCAAGCCG...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGCCCTCAAAGACCGAGTaGGCCGACAGCGCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVPSKTE*ADSAKA
Trigger: GGCCTTCGCGCTGTCGGCCCACTCGGTCTTTGAGGG...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCGGGAGCCGAGCAGCATaGAGAAGAACACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: WPRATVLALGGRAAGGRGGSRAA*RRTRPP
Trigger: TGGTGGGCGTGTTCTTCTTCATGCTGCTCGGCTCCC...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp AGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTGCGGGTAGTCGGTGCTaGTGTGGCCGAGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RATVLALGGRAAGGRGLCAGSRC*CGRGSG
Trigger: TCCTGAGCCTCGGCCACATCAGCACCGACTACCCGC...ACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGAGCCCAGCAGGAGGATaGTTTCGGCCAGCGGGTAGT +
Preference number: 4 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRSPAGG*FRPAGS
Trigger: ACTACCCGCTGGCCGAAACCATCCTCCTGCTGGGCT...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCCTGCACGCTCAGGCTaGGGCCGTGGCCGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVPARSG*GRGRGA
Trigger: AGCCCCACGGCCACGGCCCCAGCCTGAGCGTGCAGG...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCACAGTGCTCGCTCTTaGGGGACGCGCGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVHSARS*GTRGRG
Trigger: CCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTG...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCCGGGCAGCAGAGCGTTaGAGCACGTGGCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSRAAER*STWPET
Trigger: TGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCG...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCAGGTCTCCAGGTCGATaGAGGACGGCTTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: WPRATVLALGGRAAGGRGRSPGR*RTASPC
Trigger: GCAAGGAGAAGCCGTCCTTCATCGACCTGGAGACCT...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp AGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTAGGCCGCTCACCACTTaGGGAAGACCATCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RATVLALGGRAAGGRGLCRPLTT*GRPSRP
Trigger: TGGCCGGGATGGTCTTCCTCAAGTGGTGAGCGGCCT...ACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCCAAGTCCCACGATGTaGTACCGAGCCCAACCACAC +
Preference number: 4 (lower is better)
Translates to: WPRATVLALGGRAAGGRGPSPTM*YRAQPH
Trigger: GTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGG...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGACCATGGTGGCGGCTTaGGCTGCTCTGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVTMVAA*AALVTA
Trigger: TGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGT...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp CCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTCCAGGAAGACGGTCATaGAGAAGCCCAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PGPQCSLLGDARPGDAACPGRRS*RSPAGG
Trigger: TCCTCCTGCTGGGCTTCTTCATGACCGTCTTCCTGG...ACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp AGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTGGCTGCTCTGGTCACTaGAGGGCCAAACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: RATVLALGGRAAGGRGLCGCSGH*RAKPSV
Trigger: CACAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCC...ACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCAAGGTCAGGATCAGCTaGTCCAGGAAGACGGTCATG +
Preference number: 4 (lower is better)
Translates to: WPRATVLALGGRAAGGRGKVRIS*SRKTVM
Trigger: CATGACCGTCTTCCTGGAGCAGCTGATCCTGACCTT...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp CCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTAGGCTCAGGACCTTCTaGAGCTTTTCCCTCACAGCG +
Preference number: 4 (lower is better)
Translates to: PGPQCSLLGDARPGDAACRLRTF*SFSLTA
Trigger: CGCTGTGAGGGAAAAGCTCCAGAAGGTCCTGAGCCT...ACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCGGCGGCAGGGACAATaGCGAGGCCGCTCACCACTT +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVRRQGQ*RGRSPL
Trigger: AAGTGGTGAGCGGCCTCGCCATTGTCCCTGCCGCCG...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
3UTR CAA 72 bp TGGCTGTGGACTGAGGCCCCGTGTCCTGGCTGGCTGTaGGCGGGGATGGCTCTTGGCACCGAGAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WLWTEAPCPGWL*AGMALGTERLP
Trigger: GGGCAGCCTCTCGGTGCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACACGGGGCCTCAGTCCACAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGAAAGTAGCAGTGCTCTaGGGCTCAGGGTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVKVAVL*GSGCRI
Trigger: GATCCTACACCCTGAGCCTCAGAGCACTGCTACTTT...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGAGAACACGCCCACCATaGACAGGATTTTGGCCACTA +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVRTRPP*TGFWPL
Trigger: TAGTGGCCAAAATCCTGTGCATGGTGGGCGTGTTCT...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGGGGCCAAACCATCTGTaGGCGCACACCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVGPNHL*AHTQVP
Trigger: TGGGACTTGGGTGTGCGCCCACAGATGGTTTGGCCC...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGGGGAGCCGAGCAGCATaGAGAAGAACACGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQGSRAA*RRTRPP
Trigger: TGGTGGGCGTGTTCTTCTTCATGCTGCTCGGCTCCC...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCGGGAGTAGGGACCTCATCCGCCTGACCAGCCCGAGGACAGGAGAACGGCGGGGGCCAAACCATCTGTaGGCGCACACCCAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGSRDLIRLTSPRTGERRGPNHL*AHTQVP
Trigger: TGGGACTTGGGTGTGCGCCCACAGATGGTTTGGCCC...CCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGGGCTGCTCTGGTCACTaGAGGGCCAAACCATCTGTG +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQGCSGH*RAKPSV
Trigger: CACAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCC...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGCCCTTGGCCATAAGGTaGCAAGGGCTGCTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQPLAIR*QGLLLV
Trigger: CACTAGCAGCAGCCCTTGGCACCTTATGGCCAAGGG...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTCGGGAGTAGGGACCTCATCCGCCTGACCAGCCCGAGGACAGGAGAACGGCGGGCGGAACAGCAGGAATaGGGTGTCTCGGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LGSRDLIRLTSPRTGERRAEQQE*GVSALN
Trigger: GTTCAGAGCCGAGACACCGCATTCCTGCTGTTCCGC...CCGCCGTTCTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCCTACTCCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCCCTCGTCCGCCGACTaGCGCCGCTGCACGCCCAAC +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMPSSAD*RRCTPN
Trigger: GTTGGGCGTGCAGCGGCGCCAGTCGGCGGACGAGGG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCTAGCAATTTCACCATaGTGGCGGCTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVLAISP*WRLGLL
Trigger: GAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAG...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAAGGCGGGGATGGCTCTTaGCACCGAGAGGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKEGGDGS*HREAAL
Trigger: GAGGGCAGCCTCTCGGTGCCAAGAGCCATCCCCGCC...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCACAGAGGACGGCTTCTCCTTaGGGAAGGTCAGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: SGCRIGGTAWSREAPCAQRTASP*GRSGSA
Trigger: AGCTGATCCTGACCTTCCGCAAGGAGAAGCCGTCCT...CTGTGCACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR GCA 90 bp GCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCGCAGTCGCCCAGGCCTaGAGTCAGAGGGTGACGGGG +
Preference number: 4 (lower is better)
Translates to: ANRSGAVITAATSPLLGFAVAQA*SQRVTG
Trigger: CCCCGTCACCCTCTGACTGCAGGCCTGGGCGACTGC...GAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGATCTTTTTCGAGCGATaGGCCTTCTCAAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVIFFER*AFSKSV
Trigger: GACAGATTTTGAGAAGGCCCATCGCTCGAAAAAGAT...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGTGCGGAGCAGGGGCTaGAAGCTCAGGGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: GPTLWAADMGELKEQVSRVRSRG*KLREPP
Trigger: GGGTGGCTCCCTGAGCTTCCAGCCCCTGCTCCGCAC...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCGGGGAGGGAAGAGCATaGGGCGTGCGGAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGGEGRA*GVRSRG
Trigger: GCCCCTGCTCCGCACGCCCCATGCTCTTCCCTCCCC...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTGCGGGCTAGCTaGGCCCTACGCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKEQVRAS*ALRSRS
Trigger: AGACCTGGAGCGTAGGGCCCAGCTAGCCCGCACCTG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCACAGCAAAATCTGTCTCGATaGTCTTCACGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SGCRIGGTAWSREAPCAQQNLSR*SSRGAG
Trigger: CCCTGCTCCCCGTGAAGATCATCGAGACAGATTTTG...CTGTGCACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR TCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCACGTGGCCAGGCTCTaGGGGCTGCCCCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMHVARL*GLPQPT
Trigger: TGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGGGTCACACTGTGGCCTaGCAGGGGACCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGGHTVA*QGTHTL
Trigger: CAGAGTGTGGGTCCCCTGTCAGGCCACAGTGTGACC...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGTGAGTGGCTCACCTaGTTAGGCCAGGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GPTLWAADMGELKEQVSRGEWLT*LGQAHP
Trigger: GGGGTGGGCCTGGCCTAATCAGGTGAGCCACTCACC...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCGGGACCTCATCCGCCTaGCCAGCCCGAGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGGTSSA*PARGQE
Trigger: CTCCTGTCCTCGGGCTGGTCAGGCGGATGAGGTCCC...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGCCAAGAGACAGACGTTaGTCAGGAGAGATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQPRDRR*SGEMRQ
Trigger: CTGCCTCATCTCTCCTGATCAACGTCTGTCTCTTGG...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACCGGCTGGAGGCCTCATaGATGCCTCGCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNRLEAS*MPRLRT
Trigger: TGTCCTCAAGCGAGGCATGCATGAGGCCTCCAGCCG...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACAGGGGACCCACACTCTaGGCTGCTGATATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNRGPTL*AADMGE
Trigger: CTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCT...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp ATGGCTCTTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCCAGTGCCCAGACCCCTaGCTCACAGAAACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: MALGTERLPSGPRFMPFSQCPDP*LTETVR
Trigger: TCTCACAGTTTCTGTGAGTCAGGGGTCTGGGCACTG...GGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCGCCCAGGAGACACTGTaGCTGCTGCCTTGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPAQETL*LLPCEL
Trigger: GAGCTCACAAGGCAGCAGTCACAGTGTCTCCTGGGC...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp ATGGCTCTTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCGATGCACGGGAGCTGTaGACCAGGCACCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: MALGTERLPSGPRFMPFSDAREL*TRHHFP
Trigger: TGGAAAATGGTGCCTGGTTCACAGCTCCCGTGCATC...GGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGTTGAGGACAAGCTCATaGGGAACTCTAGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQLRTSS*GTLATP
Trigger: GGGAGTAGCTAGAGTTCCTCATGAGCTTGTCCTCAA...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCGAAGAGCATGGGGCGTaGGGAGCAGGGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGEEHGA*GAGAGS
Trigger: GCTTCCAGCCCCTGCTCCGCACGCCCCATGCTCTTC...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGGGCCGTCCTGGGCACTaGAGGGTGCTGCTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMGRPGH*RVLLSS
Trigger: ACTGCTCAGCAGCACCCTGCAGTGCCCAGGACGGCC...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGGAAGAGTCCACCTCCTaGTGGCTGTGGACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGEESTS*WLWTEA
Trigger: GGCCTCAGTCCACAGCCACCAGGAGGTGGACTCTTC...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCGGGGGCAGTTCACGCTaGGTGAGCCTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGGGSSR*VSLCCS
Trigger: GCTGCAGCAGAGGCTCACCCAGCGTGAACTGCCCCC...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp ATGGCTCTTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCCAAAATCTGTCTCGATaGTCTTCACGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MALGTERLPSGPRFMPFSQNLSR*SSRGAG
Trigger: CCCTGCTCCCCGTGAAGATCATCGAGACAGATTTTG...GGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGCAGTTCACGCTGGGTaGGCCTCTGCTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPTLWAADMGELKEQVSRAVHAG*ASAAAE
Trigger: TTCTGCTGCAGCAGAGGCTCACCCAGCGTGAACTGC...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCCAGGCTCTGAGGGCTaGCCCAGCCAACAGACACTG +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMPGSEG*PSQQTL
Trigger: CAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGAGCTTAGGGCTTCCATaGTTTCGTTGGGAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQSLGLP*FRWEEE
Trigger: TTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAGCT...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACCTAGCAATTTCACCATaGTGGCGGCTTGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNLAISP*WRLGLL
Trigger: GAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAG...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp ATGGCTCTTGGCACCGAGAGGCTGCCCTCGGGTCCTCGCTTCATGCCCTTCTCCTGGGAATCCCAGGTCTaGTCCAAACCCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: MALGTERLPSGPRFMPFSWESQV*SKPLVW
Trigger: CCAAACAAGGGGTTTGGACCAGACCTGGGATTCCCA...GGAGAAGGGCATGAAGCGAGGACCCGAGGGCAGCCTCTCGGTGCCAAGAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCAAGCATGGCCAGGGCTaGTCACACTGTGGCCTGACA +
Preference number: 4 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPKHGQG*SHCGLT
Trigger: TGTCAGGCCACAGTGTGACCAGCCCTGGCCATGCTT...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGAGCAGGGCCAGGGGTTaGGGGATAAGCTTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGSRARG*GISLGL
Trigger: AAGCCCTAAGCTTATCCCCCAACCCCTGGCCCTGCT...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCTCGCCCAGTGTTCCCTaGGGGCAGTTCACGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGSPSVP*GQFTLG
Trigger: ACCCAGCGTGAACTGCCCCCAGGGAACACTGGGCGA...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGGGGCTGAGATCTCACTaGCACCCAGGGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMGLRSH*HPGSSS
Trigger: GGAAGAGGACCCTGGGTGTCAGTGAGATCTCAGCCC...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCACCATTTTCCAGGGGTaGCTGAGAGCCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGTIFQG*LRAWPC
Trigger: GCAGGGCCAGGCTCTCAGTCACCCCTGGAAAATGGT...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAAGTTGATCAGGAGAGATaGGGCAGATGCACGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKEVDQER*GRCTGA
Trigger: AGCTCCCGTGCATCTGCCTCATCTCTCCTGATCAAC...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGCACAGCTCCTCCAAAGGTGTTaGAGAGAGAGAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: SGCRIGGTAWSREAPCAQLLQRC*RERGSF
Trigger: AAAAGATCCTCTCTCTCTGCAACACCTTTGGAGGAG...CTGTGCACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCGACAAGTCCACCTGTTaGGAATCCCAGGTCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPDKSTC*ESQVWS
Trigger: GGACCAGACCTGGGATTCCCAACAGGTGGACTTGTC...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGCTGGGGAGGTCCACGTaGCCAGGCTCTGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPLGRST*PGSEGC
Trigger: GCAGCCCTCAGAGCCTGGCCACGTGGACCTCCCCAG...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCTGTCAGGAGTTGGGGTaGACAGACTCCAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPCQELG*TDSKMA
Trigger: GGCCATCTTGGAGTCTGTCCACCCCAACTCCTGACA...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAATCTGGGCTGCTGATATaGGGGAGCTCAAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKESGLLI*GSSRNR
Trigger: CCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGTGTCACATCTGGCACTaGCCCAGAGAGAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGCHIWH*PRERKP
Trigger: TGGCTTCCTCTCTCTGGGCCAGTGCCAGATGTGACA...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGACTCAGGGAGCCACCCTaGAACTCTACTCTGCCACAC +
Preference number: 4 (lower is better)
Translates to: GPTLWAADMGELKEQVSRLREPP*NSTLPH
Trigger: GTGTGGCAGAGTAGAGTTCCAGGGTGGCTCCCTGAG...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACTCTCCTGGCACACCCTaGCTTTTTGCTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNSPGTP*LFASPR
Trigger: CCTTGGAGAAGCAAAAAGCCAGGGTGTGCCAGGAGA...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCTCACTGACCACCGGCTaGAGGCCTCATGCATGCCTC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGSLTTG*RPHACL
Trigger: GAGGCATGCATGAGGCCTCCAGCCGGTGGTCAGTGA...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAAGAGGTCCTGGCCACTTaGGTATGGGAAGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKEEVLAT*VWEGLE
Trigger: TTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTC...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACATGCATGCCTCGCTTaGGGACAAGCTCATGAGGAA +
Preference number: 4 (lower is better)
Translates to: WPDRGPTLWAADMGELKEHACLA*GQAHEE
Trigger: TTCCTCATGAGCTTGTCCTCAAGCGAGGCATGCATG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGTCAGGGGCGGTCATCACAGCTaGAACATCCCCTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLIWGSSRNRSAEDDAVRGGHHS*NIPSAG
Trigger: CCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCC...CCTGACAGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGTCAGGCGCTGGGTGAGCCTCTaGTGCAGCAGAAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLIWGSSRNRSAEDDAVRRWVSL*CSRRLC
Trigger: ACACAGCCTTCTGCTGCAGCAGAGGCTCACCCAGCG...CCTGACAGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGGACAGACTCCAAGATaGCCCCAGAAGCCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAGQTPR*PQKPLP
Trigger: AGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCC...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCGTGACTGCTGCCTTGTaGGCTCCTGAAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISVTAAL*APEAVP
Trigger: GGGCACTGCTTCAGGAGCTCACAAGGCAGCAGTCAC...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTCACACTCTGGGCTGCTaGTATGGGGGAGCTCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAHTLGC*YGGAQG
Trigger: TCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTG...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCAGGCCAGCAGGAGGGTaGGTGGCTCACCTGATTAGG +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISRPAGG*VAHLIR
Trigger: CCTAATCAGGTGAGCCACTCACCCTCCTGCTGGCCT...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTCCAAGTCCCACGATGTaGTACCGAGCCCAACCACAC +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAPSPTM*YRAQPH
Trigger: GTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGG...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGCATGACATGGGACTGTaGCCTCTGTCTTACACAGAG +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGHDMGL*PLSYTE
Trigger: CTCTGTGTAAGACAGAGGGCACAGTCCCATGTCATG...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGGGGCTGGTCACACTGTaGCCTGACAGGGGACCCACA +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPGLVTL*PDRGPT
Trigger: TGTGGGTCCCCTGTCAGGCCACAGTGTGACCAGCCC...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GTGGACAGACTCCAAGATGGCCCCAGAAGCCCCTGCCTCTTGACAGCCATACCCATTCAATGTCACATCTaGCACTGGCCCAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VDRLQDGPRSPCLLTAIPIQCHI*HWPRER
Trigger: CCTCTCTCTGGGCCAGTGCCAGATGTGACATTGAAT...GGGTATGGCTGTCAAGAGGCAGGGGCTTCTGGGGCCATCTTGGAGTCTGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTCCATTTGCTGATGAAGGAACTGATCATGCTGGGGAGGTCCACGTGGCCAGGCCTCTTCCAAGCTCACTaGAGGTCGGAAGAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LHLLMKELIMLGRSTWPGLFQAH*RSEEST
Trigger: GGTGGACTCTTCCGACCTCCAGTGAGCTTGGAAGAG...GCCTGGCCACGTGGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGTGCCTTGTGAGCTCCTaGAGCAGTGCCCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPCLVSS*SSAQTP
Trigger: AGGGGTCTGGGCACTGCTTCAGGAGCTCACAAGGCA...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCCAGGTCAGCAGAGGATaGTGCTGTCAGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISQVSRG*CCQELG
Trigger: CCCCAACTCCTGACAGCATCATCCTCTGCTGACCTG...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATAAGGTTTGGGTGCCATaGGAAGGCCACTGTGATGAG +
Preference number: 4 (lower is better)
Translates to: PHSGLLIWGSSRNRSAEDKVWVP*EGHCDE
Trigger: CTCATCACAGTGGCCTTCTCATGGCACCCAAACCTT...ATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGTCAGGTGGGTGAGCCTCTGCTaGAGCAGAAGGCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LLIWGSSRNRSAEDDAVRWVSLC*SRRLCF
Trigger: GAAACACAGCCTTCTGCTGCAGCAGAGGCTCACCCA...CCTGACAGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGACCATGGTGGCGGCTTaGGCTGCTCTGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPTMVAA*AALVTA
Trigger: TGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGT...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CAGCCCTTCTCCTCCTTTCTGGACACTAGGCACGAGGAAAAGCAGGGCCAGGGGTGTGCCCTACCTAGGTaGGTAGTCTGGTCTGATTAT +
Preference number: 4 (lower is better)
Translates to: QPFSSFLDTRHEEKQGQGCALPR*VVWSDY
Trigger: ATAATCAGACCAGACTACCCACCTAGGTAGGGCACA...CCCCTGGCCCTGCTTTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCACCTCTGCATGACATaGGACTGTGCCCTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMHLCMT*DCALCL
Trigger: AAGACAGAGGGCACAGTCCCATGTCATGCAGAGGTG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 72 bp AGGTCCTGGCCACTTGAGTATGGGAAGGACTTGAACTaGCTTCTAACCAGCAGGACACTGGGGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSWPLEYGKDLN*LLTSRTLGQRG
Trigger: TCCCCTCTGCCCCAGTGTCCTGCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 72 bp CCTGTGAGGTCCTGGCCACTTGAGTATGGGAAGGACTaGAACTTGCTTCTAACCAGCAGGACACTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVRSWPLEYGKD*NLLLTSRTLGQ
Trigger: CTGCCCCAGTGTCCTGCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTCAAGTGGCCAGGACCTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 72 bp GGGTTGGGGGATAAGCTTAGGGCTTCCATGCTTTCGTaGGGAGGAAGAACAGGGGGTCCTCATATCTCCACC +
Preference number: 4 (lower is better)
Translates to: GLGDKLRASMLS*GGRTGGPHIST
Trigger: GGTGGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAGCTTATCCCCCAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATAGGAGATGTCAGAGATaGCCAAGATCTCCATCCTCG +
Preference number: 4 (lower is better)
Translates to: PHSGLLIWGSSRNRSAEDRRCQR*PRSPSS
Trigger: CGAGGATGGAGATCTTGGTCATCTCTGACATCTCCT...ATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGCCTTCTCCTCCTTTCTaGACACTAGGCACGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMPSPPF*TLGTRK
Trigger: TTTCCTCGTGCCTAGTGTCCAGAAAGGAGGAGAAGG...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTTTCATGCCCTTCTCCTaGCACACCCTGGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAFMPFS*HTLAFC
Trigger: GCAAAAAGCCAGGGTGTGCCAGGAGAAGGGCATGAA...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGGTCTGATTATCAGGTaGCAACCGACAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAGLIIR*QPTSPP
Trigger: AGGTGGACTTGTCGGTTGTCACCTGATAATCAGACC...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTGTGGGTAGTCTGGTCTaGTTATCAGGTGACAACCGA +
Preference number: 4 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDAVGSLV*LSGDNR
Trigger: TCGGTTGTCACCTGATAATCAGACCAGACTACCCAC...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGCACACCCTGGCTTTTTaGTTCTCCAAGGCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPHTLAF*FSKASR
Trigger: CCTGCTGGCCTTGGAGAAGCAAAAAGCCAGGGTGTG...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCCTTCCATGCTTTCGTTaGGAGGAAGAACAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISLPCFR*EEEQGV
Trigger: GACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAG...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACTCTGTAGTCCTAAGGTaGTCAGTTTGCTATAATTTG +
Preference number: 4 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNSVVLR*SVCYNL
Trigger: CAAATTATAGCAAACTGAGCACCTTAGGACTACAGA...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCTCTCCATCCTCGCAGTaGAGATGTCAGTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISSPSSQ*RCQSSH
Trigger: GTGTGAAGACTGACATCTGCACTGCGAGGATGGAGA...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGATCTTACACAGAGTCATaGCCATCTTCTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: GPTLWAADMGELKEQVSRSYTES*PSSPFA
Trigger: AGCAAATGGAGAAGATGGCCATGACTCTGTGTAAGA...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGGATGCTGTCAGGAGTTaGGGTGGACAGACTCCAAGA +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPDAVRS*GGQTPR
Trigger: TCTTGGAGTCTGTCCACCCCAACTCCTGACAGCATC...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR TCA 90 bp CCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATACTAACAGGCTCAGATaGTTTAATCCCAGACAACAG +
Preference number: 4 (lower is better)
Translates to: PHSGLLIWGSSRNRSAEDTNRLR*FNPRQQ
Trigger: CTGTTGTCTGGGATTAAATCATCTGAGCCTGTTAGT...ATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGATCTTTTTCGAGCGATaGGCCTTCTCAAAATCTGTC +
Preference number: 4 (lower is better)
Translates to: RTGERRERFGCHEKATVMIFFER*AFSKSV
Trigger: GACAGATTTTGAGAAGGCCCATCGCTCGAAAAAGAT...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CCA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCCCTAGGTGGGTAGTCTaGTCTGATTATCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: LRASMLSLGGRTGGPHISPRWVV*SDYQVT
Trigger: TGTCACCTGATAATCAGACCAGACTACCCACCTAGG...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
3UTR CAA 72 bp CTCTGTCTTACACAGAGTCATGGCCATCTTCTCCATTaGCTGATGAAGGAACTGATCATGCTGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LCLTQSHGHLLH*LMKELIMLGRS
Trigger: GGACCTCCCCAGCATGATCAGTTCCTTCATCAGCAAATGGAGAAGATGGCCATGACTCTGTGTAAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR GCA 90 bp AGAGATGACCAAGATCTCCATCCTCGCAGTGCAGATGTCAGTCTTCACACACCGCTCCTCCAAAGGTGTTaGAGAGAGAGAGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: RDDQDLHPRSADVSLHTPLLQRC*RERGSF
Trigger: AAAAGATCCTCTCTCTCTGCAACACCTTTGGAGGAG...CGGTGTGTGAAGACTGACATCTGCACTGCGAGGATGGAGATCTTGGTCATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GTGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGACGGTGACCGCCAGCTaGGCCGCGTCCCGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: VAQGHSARSWGTRGRGTRTVTAS*AASRRG
Trigger: GCCCCTGCGGGACGCGGCCAAGCTGGCGGTCACCGT...CCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCCACAGTGCTCGCTCTaGGGGGACGCGCGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: WPRATVLALGGRAAGGRGPQCSL*GDARPG
Trigger: CCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGG...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp TGGCCCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCGAGGCCGCTCACCACTaGAGGAAGACCATCCCGGCC +
Preference number: 5 (lower is better)
Translates to: WPRATVLALGGRAAGGRGEAAHH*RKTIPA
Trigger: GGCCGGGATGGTCTTCCTCAAGTGGTGAGCGGCCTC...GCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp AGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTGTCCCGGGAGGCCCCTaGTGCACAGGTGGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: RATVLALGGRAAGGRGLCVPGGP*CTGGGP
Trigger: TGGGCCACCACCTGTGCACAAGGGGCCTCCCGGGAC...ACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS TCA 90 bp CCAGGCCCTCAAAGACCGAGTGGGCCGACAGCGCGAAGGCCAGGCTaGGCAGGCGCACGGGGCTGGCGCGCGAGAGGCCCTGCACGCTCA +
Preference number: 5 (lower is better)
Translates to: PGPQRPSGPTARRPG*AGARGWRARGPARS
Trigger: TGAGCGTGCAGGGCCTCTCGCGCGCCAGCCCCGTGCGCCTGCTCAGCCTGGCCTTCGCGCTGTCGGCCCACTCGGTCTTTGAGGGCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS TCA 90 bp CCAGCTTGGCCGCGTCCCGCAGGGGCATGGCACTCCGGGCCATGCTaGTGCCCAGGGCCACGGCCACCAGTGTCTCGTGGACGGCCACCC +
Preference number: 5 (lower is better)
Translates to: PAWPRPAGAWHSGPC*CPGPRPPVSRGRPP
Trigger: GGGTGGCCGTCCACGAGACACTGGTGGCCGTGGCCCTGGGCATCAGCATGGCCCGGAGTGCCATGCCCCTGCGGGACGCGGCCAAGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS GCA 90 bp GCAGCACGGACGCCACGCTGCCCGGCACGCCCTGGGCGCTCTCAATaGCCAGGCCCAGGCCGATGCCCAGGGGGATCATGGCGCTTACGG +
Preference number: 5 (lower is better)
Translates to: AARTPRCPARPGRSQ*PGPGRCPGGSWRLR
Trigger: CCGTAAGCGCCATGATCCCCCTGGGCATCGGCCTGGGCCTGGGCATTGAGAGCGCCCAGGGCGTGCCGGGCAGCGTGGCGTCCGTGCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CCA 90 bp TGTGTCCGGCCCGGGGCTCCCGGCGGGCTCCGGCGGCAGGGACAATaGCGAGGCCGCTCACCACTTGAGGAAGACCATCCCGGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: CVRPGAPGGLRRQGQ*RGRSPLEEDHPGQD
Trigger: GTCCTGGCCGGGATGGTCTTCCTCAAGTGGTGAGCGGCCTCGCCATTGTCCCTGCCGCCGGAGCCCGCCGGGAGCCCCGGGCCGGACACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp CCAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTACGTCCGATCCGGCGTaGAAGGTCTCCAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: PGPQCSLLGDARPGDAACTSDPA*KVSRSM
Trigger: CATCGACCTGGAGACCTTCAACGCCGGATCGGACGT...ACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS TCA 90 bp CGGCGGGCTCCGGCGGCAGGGACAATGGCGAGGCCGCTCACCACTTaGGGAAGACCATCCCGGCCAGGACGGTGTAGCCCAGCACCAGGA +
Preference number: 5 (lower is better)
Translates to: RRAPAAGTMARPLTT*GRPSRPGRCSPAPG
Trigger: TCCTGGTGCTGGGCTACACCGTCCTGGCCGGGATGGTCTTCCTCAAGTGGTGAGCGGCCTCGCCATTGTCCCTGCCGCCGGAGCCCGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCAAGGACGGCTTCTCCTaGCGGAAGGTCAGGATCAGC +
Preference number: 5 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSKDGFS*RKVRIS
Trigger: GCTGATCCTGACCTTCCGCAAGGAGAAGCCGTCCTT...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp CAGGGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGAGCCCAACCACACAGTaGGAGGCTCATGTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: QGHSARSWGTRGRGTRPVSPTTQ*EAHVSV
Trigger: GACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCT...CACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp GGCCACAGTGCTCGCTCTTGGGGGACGCGCGGCCGGGGGACGCGGCCTGTGTCCACCAGGAAGAGGACCTaGAGCAGACGGTCACTCTTC +
Preference number: 5 (lower is better)
Translates to: GHSARSWGTRGRGTRPVSTRKRT*SRRSLF
Trigger: GAAGAGTGACCGTCTGCTCAAGGTCCTCTTCCTGGT...GGACACAGGCCGCGTCCCCCGGCCGCGCGTCCCCCAAGAGCGAGCACTGTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS-3UTR CAA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGGCGGGCAGCAGAGCGTaGAAGCACGTGGCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVAGSRA*KHVARN
Trigger: GTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGC...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS TCA 90 bp CTCGGACTGGCTCTCTTTGCTCCTCAATCTGCAGACAATGTATTGTaGGACCCTCCCGGGGGCCCCTCGTCCGCCGACTGGCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLALFAPQSADNVL*DPPGGPSSADWRRC
Trigger: GCAGCGGCGCCAGTCGGCGGACGAGGGGCCCCCGGGAGGGTCTCACAATACATTGTCTGCAGATTGAGGAGCAAAGAGAGCCAGTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590875.1
CDS-3UTR CAA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGGCACACCCTGGCTTTTaGCTTCTCCAAGGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQAHPGF*LLQGQQ
Trigger: CTGCTGGCCTTGGAGAAGCAAAAAGCCAGGGTGTGC...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp TCCCAGCCCTACCCACACTCGAGGGGAGGGAAGAGCATGGGGCGTGCGGAGCAGAACGGCGGGAAAGGTTaGGGTGCCATGAGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SQPYPHSRGGKSMGRAEQNGGKG*GAMRRP
Trigger: TGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTT...CTGCTCCGCACGCCCCATGCTCTTCCCTCCCCTCGAGTGTGGGTAGGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CCA 90 bp GCACACCCAAGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTCCCGGGGGCCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: AHPSPTMCYRAQPHS*RLMSQSSNSRGPLV
Trigger: GACGAGGGGCCCCCGGGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
CDS-3UTR CAA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACAAGCAGGGCCAGGGGTaGGGGGATAAGCTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNKQGQG*GDKLRA
Trigger: AGCCCTAAGCTTATCCCCCAACCCCTGGCCCTGCTT...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GAGGCTCAGGGTGTAGGATCGGGGGCACAGCCTGGTCCCGGGAGGCCCCTTGTGACCATGCACAGGATTTaGGCCACTAGCAATTTCACC +
Preference number: 5 (lower is better)
Translates to: EAQGVGSGAQPGPGRPLVTMHRI*ATSNFT
Trigger: GGTGAAATTGCTAGTGGCCAAAATCCTGTGCATGGT...CACAAGGGGCCTCCCGGGACCAGGCTGTGCCCCCGATCCTACACCCTGAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269740.9
CDS TCA 90 bp TCTCCTTGCGGAAGGTCAGGATCAGCTGCTCCAGGAAGACGGTCATaGAGAAGCCCAGCAGGAGGATGGTTTCGGCCAGCGGGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: SPCGRSGSAAPGRRS*RSPAGGWFRPAGSR
Trigger: CCGACTACCCGCTGGCCGAAACCATCCTCCTGCTGGGCTTCTTCATGACCGTCTTCCTGGAGCAGCTGATCCTGACCTTCCGCAAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589363.5
CDS TCA 90 bp CCCAGGGAGCCCTTACCTTTTCCCTCACAGCGGGCAGCAGAGCGTTaGAGCACGTGGCCAGAAACACCCCTCCTCCAAAGGTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PREPLPFPSQRAAER*STWPETPLLQRCCR
Trigger: TCTGCAACACCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGGTAAGGGCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS GCA 90 bp TGCAGGGCCAAACCATCTGTGGGCGCACACCCAAGTCCCACGATGTaGTACCGAGCCCAACCACACAGTTGGAGGCTCATGTCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: CRAKPSVGAHPSPTM*YRAQPHSWRLMSQS
Trigger: GGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGCGCCCACAGATGGTTTGGCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
ENST00000590875.1
CDS-3UTR CAA 90 bp AGGTCCACGTGGCCAGGCTCTGAGGGCTGCCCCAGCCAACAGACACTGACAAACATGCATCAGAGTCCCTaGGCCATAAGGTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: RSTWPGSEGCPSQQTLTNMHQSP*AIRCQG
Trigger: CCCTTGGCACCTTATGGCCAAGGGACTCTGATGCAT...GTTTGTCAGTGTCTGTTGGCTGGGGCAGCCCTCAGAGCCTGGCCACGTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACGACAAGTCCACCTGTaGGGAATCCCAGGTCTGGTC +
Preference number: 5 (lower is better)
Translates to: WPDRGPTLWAADMGELKERQVHL*GIPGLV
Trigger: GACCAGACCTGGGATTCCCAACAGGTGGACTTGTCG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp TGGCCTGACAGGGGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACCCACCCCCTCCCTTTaGATGAACTCAGCGCTAACC +
Preference number: 5 (lower is better)
Translates to: WPDRGPTLWAADMGELKEPTPSL*MNSALT
Trigger: GGTTAGCGCTGAGTTCATCAAAAGGGAGGGGGTGGG...TTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCCCCTGTCAGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp TCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGATGATGCTTGTCCTGGCTGGCTGTaGGCGGGGATGGCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: SGLLIWGSSRNRSAEDDACPGWL*AGMALG
Trigger: GCCAAGAGCCATCCCCGCCAACAGCCAGCCAGGACA...AGCATCATCCTCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CCA 90 bp TTTTGGCCACTAGCAATTTCACCATGGTGGCGGCTTGGGCTGCTCTaGTCACTGCAGGGCCAAACCATCTGTGGGCGCACACCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: FWPLAISPWWRLGLL*SLQGQTICGRTPKS
Trigger: GGACTTGGGTGTGCGCCCACAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAGTGGCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
CDS CCA 90 bp CGCCCACCATGCACAGGATTTTGGCCACTAGCAATTTCACCATGGTaGCGGCTTGGGCTGCTCTGGTCACTGCAGGGCCAAACCATCTCC +
Preference number: 5 (lower is better)
Translates to: RPPCTGFWPLAISPW*RLGLLWSLQGQTIS
Trigger: GGAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAGTGGCCAAAATCCTGTGCATGGTGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589363.5
CDS TCA 90 bp TCAGGACCTTCTGGAGCTTTTCCCTCACAGCGGGCAGCAGAGCGTTaGAGCACGTGGCCAGAAACACCCCTCCTCCAAAGGTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: SGPSGAFPSQRAAER*STWPETPLLQRCCR
Trigger: TCTGCAACACCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGCTCCAGAAGGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CCA 90 bp CGCCCACCATGCACAGGATTTTGGCCACTAGCAATTTCACCATGGTaGCGGCTTGGGCTGCTCTGGTCACTGCAGGGCCAAACCATCTGT +
Preference number: 5 (lower is better)
Translates to: RPPCTGFWPLAISPW*RLGLLWSLQGQTIC
Trigger: ACAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAGTGGCCAAAATCCTGTGCATGGTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
CDS CCA 90 bp GCACACCCAAGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTGTGAACATCAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: AHPSPTMCYRAQPHS*RLMSQSSNCEHQGH
Trigger: GTGCCCCTGATGTTCACAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590875.1
CDS-3UTR CAA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGCTTCCATGCTTTCGTaGGGAGGAAGAACAGGGGGT +
Preference number: 5 (lower is better)
Translates to: GPTLWAADMGELKEQVSRASMLS*GGRTGG
Trigger: ACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGC...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGAGCCCAACCACACAGTaGGAGGCTCATGTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: RTGERRERFGCHEKATVMSPTTQ*EAHVSV
Trigger: GACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCT...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCCCCAAGAGACAGACGTaGATCAGGAGAGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: ANRSGAVITAATSPLLGFPKRQT*IRRDEA
Trigger: TGCCTCATCTCTCCTGATCAACGTCTGTCTCTTGGG...GAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CCA 90 bp GCACACCCAAGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTCACTGCATTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: AHPSPTMCYRAQPHS*RLMSQSSNSLHSGL
Trigger: AAGACCTGAATGCAGTGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589166.1
CDS-3UTR CAA 90 bp CTTAGGGCTTCCATGCTTTCGTTGGGAGGAAGAACAGGGGGTCCTCATATCTCCAGAAGCCCCTGCCTCTaGACAGCCATACCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LRASMLSLGGRTGGPHISRSPCL*TAIPCE
Trigger: CTCACAGGGTATGGCTGTCAAGAGGCAGGGGCTTCT...GGAGATATGAGGACCCCCTGTTCTTCCTCCCAACGAAAGCATGGAAGCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS GCA 90 bp TTGGCATCAGTGTTGAAAATGCATCAGAGTCCCTTGGCCATAAGGTaGCAAGGGCTGCTGCTAGTGCCCAGGGAGCCCTTACCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LASVLKMHQSPLAIR*QGLLLVPREPLPFP
Trigger: GGGAAAAGGTAAGGGCTCCCTGGGCACTAGCAGCAGCCCTTGGCACCTTATGGCCAAGGGACTCTGATGCATTTTCAACACTGATGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAGGCCATCTTCTCCATTaGCTGATGAAGGAACTGATC +
Preference number: 5 (lower is better)
Translates to: GPTLWAADMGELKEQVSRGHLLH*LMKELI
Trigger: GATCAGTTCCTTCATCAGCAAATGGAGAAGATGGCC...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GCTAACCGATCTGGGGCGGTCATCACAGCTGCAACATCCCCTCTGCTGGGATTCGAGTATGGGAAGGACTaGAACTTGCTTCTAACCAGC +
Preference number: 5 (lower is better)
Translates to: ANRSGAVITAATSPLLGFEYGKD*NLLLTS
Trigger: GCTGGTTAGAAGCAAGTTCAAGTCCTTCCCATACTC...GAATCCCAGCAGAGGGGATGTTGCAGCTGTGATGACCGCCCCAGATCGGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp AGGACAGGAGAACGGCGGGAAAGGTTTGGGTGCCATGAGAAGGCCACTGTGATGACCATGCACAGGATTTaGGCCACTAGCAATTTCACC +
Preference number: 5 (lower is better)
Translates to: RTGERRERFGCHEKATVMTMHRI*ATSNFT
Trigger: GGTGAAATTGCTAGTGGCCAAAATCCTGTGCATGGT...CATCACAGTGGCCTTCTCATGGCACCCAAACCTTTCCCGCCGTTCTCCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS-3UTR CAA 90 bp GGACCCACACTCTGGGCTGCTGATATGGGGGAGCTCAAGGAACAGGTCAGCAGAAGGCCTTCACTGAACTaGGCATCAGTGTTGAAAATG +
Preference number: 5 (lower is better)
Translates to: GPTLWAADMGELKEQVSRRPSLN*ASVLKM
Trigger: CATTTTCAACACTGATGCCAAGTTCAGTGAAGGCCT...TCTGCTGACCTGTTCCTTGAGCTCCCCCATATCAGCAGCCCAGAGTGTGGGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CCA 72 bp GAGAGGCCCTGCACGCTCAGGCTGGGGCCGTGGCCGTaGGGCTCCACGTACAGCGCGTGGCCCCGCGCGCCC +
Preference number: 6 (lower is better)
Translates to: ERPCTLRLGPWP*GSTYSAWPRAP
Trigger: GGGCGCGCGGGGCCACGCGCTGTACGTGGAGCCCCACGGCCACGGCCCCAGCCTGAGCGTGCAGGGCCTCTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CCA 72 bp CGGGGCTGGCGCGCGAGAGGCCCTGCACGCTCAGGCTaGGGCCGTGGCCGTGGGGCTCCACGTACAGCGCGT +
Preference number: 6 (lower is better)
Translates to: RGWRARGPARSG*GRGRGAPRTAR
Trigger: ACGCGCTGTACGTGGAGCCCCACGGCCACGGCCCCAGCCTGAGCGTGCAGGGCCTCTCGCGCGCCAGCCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CCA 72 bp AGTCCAGCAACTCCCGGGGGCCCCTCGTCCGCCGACTaGCGCCGCTGCACGCCCAACGGCCGCGCAGTCTCG +
Preference number: 6 (lower is better)
Translates to: SPATPGGPSSAD*RRCTPNGRAVS
Trigger: CGAGACTGCGCGGCCGTTGGGCGTGCAGCGGCGCCAGTCGGCGGACGAGGGGCCCCCGGGAGTTGCTGGACT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
CDS CCA 72 bp GCCAAACCATCTCCCGGGGGCCCCTCGTCCGCCGACTaGCGCCGCTGCACGCCCAACGGCCGCGCAGTCTCG +
Preference number: 6 (lower is better)
Translates to: AKPSPGGPSSAD*RRCTPNGRAVS
Trigger: CGAGACTGCGCGGCCGTTGGGCGTGCAGCGGCGCCAGTCGGCGGACGAGGGGCCCCCGGGAGATGGTTTGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589363.5
CDS TCA 72 bp CAAAGACCGAGTGGGCCGACAGCGCGAAGGCCAGGCTaGGCAGGCGCACGGGGCTGGCGCGCGAGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: QRPSGPTARRPG*AGARGWRARGP
Trigger: AGGGCCTCTCGCGCGCCAGCCCCGTGCGCCTGCTCAGCCTGGCCTTCGCGCTGTCGGCCCACTCGGTCTTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS GCA 72 bp ACGCCACGCTGCCCGGCACGCCCTGGGCGCTCTCAATaGCCAGGCCCAGGCCGATGCCCAGGGGGATCATGG +
Preference number: 6 (lower is better)
Translates to: TPRCPARPGRSQ*PGPGRCPGGSW
Trigger: CCATGATCCCCCTGGGCATCGGCCTGGGCCTGGGCATTGAGAGCGCCCAGGGCGTGCCGGGCAGCGTGGCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CAA 72 bp CCCAGGGGGATCATGGCGCTTACGGTGACCGCCAGCTaGGCCGCGTCCCGCAGGGGCATGGCACTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: PRGIMALTVTAS*AASRRGMALRA
Trigger: GGCCCGGAGTGCCATGCCCCTGCGGGACGCGGCCAAGCTGGCGGTCACCGTAAGCGCCATGATCCCCCTGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS TCA 72 bp CCGCGTCCCGCAGGGGCATGGCACTCCGGGCCATGCTaGTGCCCAGGGCCACGGCCACCAGTGTCTCGTGGA +
Preference number: 6 (lower is better)
Translates to: PRPAGAWHSGPC*CPGPRPPVSRG
Trigger: TCCACGAGACACTGGTGGCCGTGGCCCTGGGCATCAGCATGGCCCGGAGTGCCATGCCCCTGCGGGACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS TCA 72 bp CCAGGCCGATGCCCAGGGGGATCATGGCGCTTACGGTaGCCGCCAGCTTGGCCGCGTCCCGCAGGGGCATGG +
Preference number: 6 (lower is better)
Translates to: PGRCPGGSWRLR*PPAWPRPAGAW
Trigger: CCATGCCCCTGCGGGACGCGGCCAAGCTGGCGGTCACCGTAAGCGCCATGATCCCCCTGGGCATCGGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CAA 90 bp AGGCCGATGCCCAGGGGGATCATGGCGCTTACGGTGACCGCCAGCTaGGCCGCGTCCCGCAGGGGCATGGCACTCCGGGCCATGCTGATG +
Preference number: 6 (lower is better)
Translates to: RPMPRGIMALTVTAS*AASRRGMALRAMLM
Trigger: CATCAGCATGGCCCGGAGTGCCATGCCCCTGCGGGACGCGGCCAAGCTGGCGGTCACCGTAAGCGCCATGATCCCCCTGGGCATCGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269740.9
ENST00000545664.5
CDS CAA 90 bp CGCACACCCAAGTCCCACGATGTGCTACCGAGCCCAACCACACAGTaGGAGGCTCATGTCTCAGTCCAGCAACTCCCGGGGGCCCCTCGT +
Preference number: 6 (lower is better)
Translates to: RTPKSHDVLPSPTTQ*EAHVSVQQLPGAPR
Trigger: ACGAGGGGCCCCCGGGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
CDS CCA 72 bp TGGGCTGCTCTGGTCACTGCAGGGCCAAACCATCTGTaGGCGCACACCCAAGTCCCACGATGTGCTACCGAG +
Preference number: 6 (lower is better)
Translates to: WAALVTAGPNHL*AHTQVPRCATE
Trigger: CTCGGTAGCACATCGTGGGACTTGGGTGTGCGCCCACAGATGGTTTGGCCCTGCAGTGACCAGAGCAGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
CDS CAA 90 bp GCCCAGGGAGCCCTTACCTTTTCCCTCACAGCGGGCAGCAGAGCGTaGAAGCACGTGGCCAGAAACACCCCTCCTCCAAAGGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: AQGALTFSLTAGSRA*KHVARNTPPPKVLQ
Trigger: CTGCAACACCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGGTAAGGGCTCCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS TCA 72 bp GCAGGAGGATGGTTTCGGCCAGCGGGTAGTCGGTGCTaGTGTGGCCGAGGCTCAGGACCTTCTGGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: AGGWFRPAGSRC*CGRGSGPSGAF
Trigger: AAAAGCTCCAGAAGGTCCTGAGCCTCGGCCACATCAGCACCGACTACCCGCTGGCCGAAACCATCCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CCA 72 bp AGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: SPTMCYRAQPHS*RLMSQSSNSRG
Trigger: CCCCCGGGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
CDS CAA 72 bp TCATACTCCGAGTCGCTGCCCACGTCCGATCCGGCGTaGAAGGTCTCCAGGTCGATGAAGGACGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SYSESLPTSDPA*KVSRSMKDGFS
Trigger: GGAGAAGCCGTCCTTCATCGACCTGGAGACCTTCAACGCCGGATCGGACGTGGGCAGCGACTCGGAGTATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589363.5
CDS TCA 72 bp TCTGGAGCTTTTCCCTCACAGCGGGCAGCAGAGCGTTaGAGCACGTGGCCAGAAACACCCCTCCTCCAAAGG +
Preference number: 6 (lower is better)
Translates to: SGAFPSQRAAER*STWPETPLLQR
Trigger: CCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGCTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS TCA 72 bp GGAAGGTCAGGATCAGCTGCTCCAGGAAGACGGTCATaGAGAAGCCCAGCAGGAGGATGGTTTCGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: GRSGSAAPGRRS*RSPAGGWFRPA
Trigger: CGCTGGCCGAAACCATCCTCCTGCTGGGCTTCTTCATGACCGTCTTCCTGGAGCAGCTGATCCTGACCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589363.5
CDS TCA 72 bp CCCTTACCTTTTCCCTCACAGCGGGCAGCAGAGCGTTaGAGCACGTGGCCAGAAACACCCCTCCTCCAAAGG +
Preference number: 6 (lower is better)
Translates to: PLPFPSQRAAER*STWPETPLLQR
Trigger: CCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGGTAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CAA 72 bp GCCCTTACCTTTTCCCTCACAGCGGGCAGCAGAGCGTaGAAGCACGTGGCCAGAAACACCCCTCCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: ALTFSLTAGSRA*KHVARNTPPPK
Trigger: CTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGGTAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CAA 90 bp CTCAGGACCTTCTGGAGCTTTTCCCTCACAGCGGGCAGCAGAGCGTaGAAGCACGTGGCCAGAAACACCCCTCCTCCAAAGGTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: LRTFWSFSLTAGSRA*KHVARNTPPPKVLQ
Trigger: CTGCAACACCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGCTCCAGAAGGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CAA 90 bp GATCCGGCGTTGAAGGTCTCCAGGTCGATGAAGGACGGCTTCTCCTaGCGGAAGGTCAGGATCAGCTGCTCCAGGAAGACGGTCATGAAG +
Preference number: 6 (lower is better)
Translates to: DPALKVSRSMKDGFS*RKVRISCSRKTVMK
Trigger: CTTCATGACCGTCTTCCTGGAGCAGCTGATCCTGACCTTCCGCAAGGAGAAGCCGTCCTTCATCGACCTGGAGACCTTCAACGCCGGATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589363.5
CDS GCA 72 bp AAACCATCTGTGGGCGCACACCCAAGTCCCACGATGTaGTACCGAGCCCAACCACACAGTTGGAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: KPSVGAHPSPTM*YRAQPHSWRLM
Trigger: CATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGCGCCCACAGATGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
ENST00000590875.1
CDS GCA 72 bp AAGGACGGCTTCTCCTTGCGGAAGGTCAGGATCAGCTaGTCCAGGAAGACGGTCATGAAGAAGCCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: KDGFSLRKVRIS*SRKTVMKKPSR
Trigger: CCTGCTGGGCTTCTTCATGACCGTCTTCCTGGAGCAGCTGATCCTGACCTTCCGCAAGGAGAAGCCGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589363.5
CDS CAA 72 bp TTCTGGAGCTTTTCCCTCACAGCGGGCAGCAGAGCGTaGAAGCACGTGGCCAGAAACACCCCTCCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: FWSFSLTAGSRA*KHVARNTPPPK
Trigger: CTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCTGCTGCCCGCTGTGAGGGAAAAGCTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269740.9
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CAA 90 bp CGCACACCCAAGTCCCACGATGTGCTACCGAGCCCAACCACACAGTaGGAGGCTCATGTCTCAGTCCAGCAACTCACTGCATTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: RTPKSHDVLPSPTTQ*EAHVSVQQLTAFRS
Trigger: AGACCTGAATGCAGTGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACTTGGGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589166.1
CDS CCA 72 bp TGCACAGGATTTTGGCCACTAGCAATTTCACCATGGTaGCGGCTTGGGCTGCTCTGGTCACTGCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: CTGFWPLAISPW*RLGLLWSLQGQ
Trigger: TTGGCCCTGCAGTGACCAGAGCAGCCCAAGCCGCCACCATGGTGAAATTGCTAGTGGCCAAAATCCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CAA 90 bp CCTTCACTGAACTTGGCATCAGTGTTGAAAATGCATCAGAGTCCCTaGGCCATAAGGTGCCAAGGGCTGCTGCTAGTGCCCAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: PSLNLASVLKMHQSP*AIRCQGLLLVPREP
Trigger: GGGCTCCCTGGGCACTAGCAGCAGCCCTTGGCACCTTATGGCCAAGGGACTCTGATGCATTTTCAACACTGATGCCAAGTTCAGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS GCA 72 bp TTTGGAACTCGGACTGGCTCTCTTTGCTCCTCAATCTaGAGACAATGTATTGTGAGACCCTCCCGGGGGCCC +
Preference number: 6 (lower is better)
Translates to: FGTRTGSLCSSI*RQCIVRPSRGP
Trigger: GGGCCCCCGGGAGGGTCTCACAATACATTGTCTGCAGATTGAGGAGCAAAGAGAGCCAGTCCGAGTTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590875.1
CDS CCA 72 bp AGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTCACTGCAT +
Preference number: 6 (lower is better)
Translates to: SPTMCYRAQPHS*RLMSQSSNSLH
Trigger: ATGCAGTGAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589166.1
CDS CCA 72 bp AGTCCCACGATGTGCTACCGAGCCCAACCACACAGTTaGAGGCTCATGTCTCAGTCCAGCAACTGTGAACAT +
Preference number: 6 (lower is better)
Translates to: SPTMCYRAQPHS*RLMSQSSNCEH
Trigger: ATGTTCACAGTTGCTGGACTGAGACATGAGCCTCCAACTGTGTGGTTGGGCTCGGTAGCACATCGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590875.1
CDS CAA 72 bp AACTTGGCATCAGTGTTGAAAATGCATCAGAGTCCCTaGGCCATAAGGTGCCAAGGGCTGCTGCTAGTGCCC +
Preference number: 6 (lower is better)
Translates to: NLASVLKMHQSP*AIRCQGLLLVP
Trigger: GGGCACTAGCAGCAGCCCTTGGCACCTTATGGCCAAGGGACTCTGATGCATTTTCAACACTGATGCCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CAA 90 bp AGAGCGTTGAAGCACGTGGCCAGAAACACCCCTCCTCCAAAGGTGTaGCAGAGAGAGAGGATCTTTTTCGAGCGATGGGCCTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: RALKHVARNTPPPKV*QRERIFFERWAFSK
Trigger: TTTTGAGAAGGCCCATCGCTCGAAAAAGATCCTCTCTCTCTGCAACACCTTTGGAGGAGGGGTGTTTCTGGCCACGTGCTTCAACGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5
CDS CCA 72 bp TGCACCTGGCCAGTTCTTCAGTTTTGGAACTCGGACTaGCTCTCTTTGCTCCTCAATCTGCAGACAATGTAT +
Preference number: 6 (lower is better)
Translates to: CTWPVLQFWNSD*LSLLLNLQTMY
Trigger: ATACATTGTCTGCAGATTGAGGAGCAAAGAGAGCCAGTCCGAGTTCCAAAACTGAAGAACTGGCCAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590875.1
CDS CAA 72 bp TCCGTCACCCTTACAGCATCAAGGCCTTCACTGAACTaGGCATCAGTGTTGAAAATGCATCAGAGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: SVTLTASRPSLN*ASVLKMHQSPL
Trigger: CAAGGGACTCTGATGCATTTTCAACACTGATGCCAAGTTCAGTGAAGGCCTTGATGCTGTAAGGGTGACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CAA 90 bp TTCCTACTTTCCGTCACCCTTACAGCATCAAGGCCTTCACTGAACTaGGCATCAGTGTTGAAAATGCATCAGAGTCCCTTGGCCATAAGG +
Preference number: 6 (lower is better)
Translates to: FLLSVTLTASRPSLN*ASVLKMHQSPLAIR
Trigger: CCTTATGGCCAAGGGACTCTGATGCATTTTCAACACTGATGCCAAGTTCAGTGAAGGCCTTGATGCTGTAAGGGTGACGGAAAGTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455372.2
CDS CCA 72 bp AAGGTGTTGCAGAGAGAGAGGATCTTTTTCGAGCGATaGGCCTTCTCAAAATCTGTCTCGATGATCTTCACG +
Preference number: 6 (lower is better)
Translates to: KVLQRERIFFER*AFSKSVSMIFT
Trigger: CGTGAAGATCATCGAGACAGATTTTGAGAAGGCCCATCGCTCGAAAAAGATCCTCTCTCTCTGCAACACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269740.9
ENST00000455372.2
ENST00000545664.5
ENST00000589166.1
ENST00000589363.5