RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A13 (Homo sapiens)

Ensembl gene IDs: ENSG00000165915

Ensembl transcript IDs: ENST00000354884.8, ENST00000362021.9, ENST00000524928.1, ENST00000526614.5, ENST00000527091.1, ENST00000528979.1, ENST00000529740.1, ENST00000531419.5, ENST00000531865.5, ENST00000531974.5, ENST00000533076.5

Found 607 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCGGGCCTGGGGACCAGCAGTGCGGTAGCCACACCCTTTGGCTaGTGCCCCTCTGCTGATGCCACCCGCCACAACCACCCGCCACGC +
Preference number: 1 (lower is better)
Translates to: LPGLGTSSAVATPFG*CPSADATRHNHPPR
Trigger: GCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAAGGGTGTGGCTACCGCACTGCTGGTCCCCAGGCCCGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 90 bp GATGCCACCCGCCACAACCACCCGCCACGCCCGTACCTACTCCCTTaGGGGACTGGGTACAGATGGCGAAGCCAGCGCCCAGTAGGCCCC +
Preference number: 1 (lower is better)
Translates to: DATRHNHPPRPYLLP*GTGYRWRSQRPVGP
Trigger: GGGGCCTACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR TCA 90 bp GACCAGCAGTGCGGTAGCCACACCCTTTGGCTGGTGCCCCTCTGCTaGTGCCACCCGCCACAACCACCCGCCACGCCCGTACCTACTCCC +
Preference number: 1 (lower is better)
Translates to: DQQCGSHTLWLVPLC*CHPPQPPATPVPTP
Trigger: GGGAGTAGGTACGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAAGGGTGTGGCTACCGCACTGCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 90 bp GGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTaGTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTGCTTGGG +
Preference number: 1 (lower is better)
Translates to: GGGQLWSSLHPGSLG*SHSRGPSRARPLLG
Trigger: CCCAAGCAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTGC +
Preference number: 1 (lower is better)
Translates to: QWEVGSSGVPCTLDP*AALTPGVPAGQGLC
Trigger: GCAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR GCA 90 bp CCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTCTTCCTCGCTGCTTACTCCGGGAGG +
Preference number: 1 (lower is better)
Translates to: PWAALTPGVPAGQGL*LGPVLLFLAAYSGR
Trigger: CCTCCCGGAGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR GCA 90 bp TCTGCAGCGGGAGAACACCCAACTGGGTACCCAAGGCACTGTGTGTaGTCCCCACCTCCCGGGCCTGGGGACCAGCAGTGCGGTAGCCAC +
Preference number: 1 (lower is better)
Translates to: SAAGEHPTGYPRHCV*SPPPGPGDQQCGSH
Trigger: GTGGCTACCGCACTGCTGGTCCCCAGGCCCGGGAGGTGGGGAGCACACACAGTGCCTTGGGTACCCAGTTGGGTGTTCTCCCGCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 90 bp GGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTGCTTaGGACCAGTGCTGCTCTTCCTCGCTGCTTACTCCGGGAGGTGAA +
Preference number: 1 (lower is better)
Translates to: GLLSLPGSQQGKASA*DQCCSSSLLTPGGE
Trigger: TTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 90 bp GCAGCTTGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGC +
Preference number: 1 (lower is better)
Translates to: AAWLRSIGQSRPGAG*QSRPPEGRSRGSPC
Trigger: GCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCAAGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR TCA 90 bp CAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTGCCGTCTCCTCTGCAGCGGGAGAAC +
Preference number: 1 (lower is better)
Translates to: QGARSPRRCRESRQR*RAGPRLPSPLQREN
Trigger: GTTCTCCCGCTGCAGAGGAGACGGCAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 90 bp GGATGGCAAAGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTaGGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGATAT +
Preference number: 1 (lower is better)
Translates to: GWQSRPPEGRSRGSP*APAGPDALSAQVRY
Trigger: ATATCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACTTTGCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATaGGATCTCATCCAGGGCACCAGGGCAGTGACAAGGGTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: ARPSQARAIGGGHLE*DLIQGTRAVTRVGW
Trigger: CCAACCCACCCTTGTCACTGCCCTGGTGCCCTGGATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR CCA 90 bp TACAAGCGCTCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATaGTTGTCAGGAGCCCGATCTGCAGGGAGGGGAGCCGTGGCTGCG +
Preference number: 1 (lower is better)
Translates to: YKRSPHGGSHAGGWP*LSGARSAGRGAVAA
Trigger: CGCAGCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGAGCGCTTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 90 bp GAACAGTGTGAGGTGGGAAAGATCTCGGCCAGCTGCAGAGTAGGCTaGCTCTGGGCCAGAGGCCAGAGGCCAGAGGGAGGAGGTAGAGGA +
Preference number: 1 (lower is better)
Translates to: EQCEVGKISASCRVG*LWARGQRPEGGGRG
Trigger: TCCTCTACCTCCTCCCTCTGGCCTCTGGCCTCTGGCCCAGAGGCAGCCTACTCTGCAGCTGGCCGAGATCTTTCCCACCTCACACTGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 90 bp GGCGTCAGCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCG +
Preference number: 1 (lower is better)
Translates to: GVSQGKWLGIMASAL*RSTFLSADNVEPSP
Trigger: CGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCTGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR GCA 90 bp GGGCTGAGCACCCCACTCGCCCACTCATTCCACAGAGGTTTACTCTaGTCTGAGCTGGCTCTGGGTGGGCACTGTGTTGGCCACTGGAAA +
Preference number: 1 (lower is better)
Translates to: GLSTPLAHSFHRGLL*SELALGGHCVGHWK
Trigger: TTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCTCTGTGGAATGAGTGGGCGAGTGGGGTGCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 90 bp CTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGGAAATaGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTG +
Preference number: 1 (lower is better)
Translates to: LWSGPAEYLGVSQGK*LGIMASALCRSTFL
Trigger: CAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR TCA 90 bp GAGCACCCCACTCGCCCACTCATTCCACAGAGGTTTACTCTGCTCTaGGCTGGCTCTGGGTGGGCACTGTGTTGGCCACTGGAAATACAG +
Preference number: 1 (lower is better)
Translates to: EHPTRPLIPQRFTLL*AGSGWALCWPLEIQ
Trigger: CTGTATTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCTCTGTGGAATGAGTGGGCGAGTGGGGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 90 bp TGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATT +
Preference number: 1 (lower is better)
Translates to: CLAGGSFSLAATRPL*LSHMRSQSESEHLI
Trigger: AATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR CCA 90 bp AGACAGGACTCACTCACACACTCACAGGCGCTGGGAAGGAAAGGATaGATAGAGTGCCCAGGGGAGCAGGCCCAGGAACCAAATTTAGAT +
Preference number: 1 (lower is better)
Translates to: RQDSLTHSQALGRKG*IECPGEQAQEPNLD
Trigger: ATCTAAATTTGGTTCCTGGGCCTGCTCCCCTGGGCACTCTATCCATCCTTTCCTTCCCAGCGCCTGTGAGTGTGTGAGTGAGTCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGGAGGGGAGCCGTGGCTaGGGGGTCTGTGTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLEGSRG*GVCVEG
Trigger: GCCCTCAACACAGACCCCGCAGCCACGGCTCCCCTC...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGCGTGTTGGCCAGGAATaGGCTCCCAGGGCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLRVGQE*APRAAL
Trigger: CAGGGCTGCCCTGGGAGCTCATTCCTGGCCAACACG...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTGTCAGGAGCCCGATCTaGAGGGAGGGGAGCCGTGGC +
Preference number: 2 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPVRSPI*REGSRG
Trigger: GCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGAC...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGGCCGGAGCACATTCCTaGGCGCTGACAACGTGGAGC +
Preference number: 2 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLAGAHS*ALTTWS
Trigger: GCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGC...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGGACAGGCGCTACACTaGGCCCCGGACCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: RARPGCGVGQLSTWASAKGQALH*APDPAQ
Trigger: CTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCGGGCAGGGCCAGGCCTaGCTGTGGAGTGGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: HLPPVWREAHSLSQPLALGQGQA*LWSGPA
Trigger: AGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCC...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGCGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTGAA +
Preference number: 2 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLRPGAG*QSRPPE
Trigger: TTCAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCG...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CAA 90 bp GCAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTaGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: AVGGGQLWSSLHPGS*GCSHSRGPSRARPL
Trigger: CAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGCCTGGATCCTTGGGCTaGTCTCACTCCCGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RARPGCGVGQLSTWASAKPGSLG*SHSRGP
Trigger: GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGG...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTTCTCTGGCCTGGGGCTaGTCCCTGCCCGGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAASLAWG*SLPGRL
Trigger: CAGCCTGCCGGGCAGGGAGCAGCCCCAGGCCAGAGA...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGCTGCCAGGGCGTGTTaGCCAGGAATGAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPAARAC*PGMSSQ
Trigger: CTGGGAGCTCATTCCTGGCCAACACGCCCTGGCAGC...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCCTGGGGCTGCTCCCTaGCCGGCAGGCTGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAPGAAP*PAGCCL
Trigger: CAAACAGCAGCCTGCCGGGCAGGGAGCAGCCCCAGG...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGCCTGGGGCTGCTCCCTaGCCGGCAGGCTGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: WAALEFPAPWILGLLSLPPGAAP*PAGCCL
Trigger: CAAACAGCAGCCTGCCGGGCAGGGAGCAGCCCCAGG...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCAGCAGAAGCAGCTGCTaGAGGGAGCGCCACGGGTCC +
Preference number: 2 (lower is better)
Translates to: PPVWREAHSLSQPLALSASRSSC*RERHGS
Trigger: GGACCCGTGGCGCTCCCTGCAGCAGCTGCTTCTGCT...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
3UTR-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCATCCTGGCCATCCCTaGGCGTGGGCACCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLHPGHP*AWAPGP
Trigger: GGGGCCTGGTGCCCACGCCCAGGGATGGCCAGGATG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR CAA 90 bp AAGCGCTCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTGCAGGGAGGGGAGCCGTGGCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: KRSPHGGSHAGGWPW*SGARSAGRGAVAAG
Trigger: CCCCGCAGCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGAGCGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTGTACGATATACACACTaGGCCCCCTGCCCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPVRYTH*APCPSP
Trigger: TGGGGAAGGGCAGGGGGCTCAGTGTGTATATCGTAC...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGAGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRAGQGL*LGPVLL
Trigger: GAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGC...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTGGAGGTGGCAAGAGCTaGTGGTGCTGCCAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAGGGKS*WCCQGV
Trigger: CACGCCCTGGCAGCACCAGCAGCTCTTGCCACCTCC...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACA +
Preference number: 2 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPEVTTA*LGTGAT
Trigger: TGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGG +
Preference number: 2 (lower is better)
Translates to: HLPPVWREAHSLSQPLALCTLDP*AALTPG
Trigger: CCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCATGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGG +
Preference number: 2 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPCTLDP*AALTPG
Trigger: CCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGAGCTGCCAGGGCGTGTTaGCCAGGAATGAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRAARAC*PGMSSQ
Trigger: CTGGGAGCTCATTCCTGGCCAACACGCCCTGGCAGC...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAARASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 2 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCCCGGGCTCACTATGTaGCTGCTCCAGGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAPGLTM*LLQESL
Trigger: CAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGG...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAGGACAGGCGCTACACTaGGCCCCGGACCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: ASALCRSTFLSADNVEPSGQALH*APDPAQ
Trigger: CTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCC...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGAGTTCCCTGCACCCTaGATCCTTGGGCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: RARPGCGVGQLSTWASAKEFPAP*ILGLLS
Trigger: TGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGAGTGCTGAGTGGGGCTaGGGTACAGGAGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: WAALEFPAPWILGLLSLPSAEWG*GTGAPA
Trigger: GGCAGGTGCTCCTGTACCCCAGCCCCACTCAGCACT...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGCCCAGAACTCCCACTaGGACCAGGGCCCAGAGACC +
Preference number: 2 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLAQNSH*DQGPET
Trigger: GGTCTCTGGGCCCTGGTCCCAGTGGGAGTTCTGGGC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR-3UTR TCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCAGGTTTACTCTGCTCTaGGCTGGCTCTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: HLPPVWREAHSLSQPLALRFTLL*AGSGWA
Trigger: TGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCT...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCATCCGAGCATCTTATTaGTGCAGGGGGCAGGGGCGT +
Preference number: 2 (lower is better)
Translates to: PPVWREAHSLSQPLALSAIRASY*CRGQGR
Trigger: ACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGAT...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 2 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 2 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGTCTGCTTGGGACCAGTaGTGCTCTTCCTCGCTGCTT +
Preference number: 2 (lower is better)
Translates to: RARPGCGVGQLSTWASAKSAWDQ*CSSSLL
Trigger: AAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGA...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAGGACAGGCGCTACACTaGGCCCCGGACCCAGCACAG +
Preference number: 2 (lower is better)
Translates to: PEERVLGSASQLTTRSWGGQALH*APDPAQ
Trigger: CTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCC...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAGAGTTCCCTGCACCCTaGATCCTTGGGCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPEFPAP*ILGLLS
Trigger: TGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTC...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGTGACAAGGGTGGGTTaGGCAGCTGGGGCCCAGAAC +
Preference number: 2 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLVTRVG*AAGAQN
Trigger: GTTCTGGGCCCCAGCTGCCCAACCCACCCTTGTCAC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR-3UTR CCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCCAAGCGCTCACCTCATaGGGGATCTCATGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: HLPPVWREAHSLSQPLALQALTS*GISCRR
Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGAGCGCTTG...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp AGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTGAAGGGCAGGTGGAGTGGGCCAGCTaGGTACCTGGGCGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: REHVHQGDVEKAARGEGQVEWAS*VPGRQP
Trigger: TGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCAC...CTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 2 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR GCA 90 bp AGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTGAAGGGCAGAGCCCAGCCCCAGAGTaGCATGCTGGACAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: REHVHQGDVEKAARGEGQSPAPE*HAGQAQ
Trigger: CTGGGCCTGTCCAGCATGGCACTCTGGGGCTGGGCT...CTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACA +
Preference number: 2 (lower is better)
Translates to: WAALEFPAPWILGLLSLPEVTTA*LGTGAT
Trigger: TGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGCTCACTACTAGGAGCTaGGGACTGTCAGTGCTGAGT +
Preference number: 2 (lower is better)
Translates to: RARPGCGVGQLSTWASAKLTTRS*GLSVLS
Trigger: ACTCAGCACTGACAGTCCCCAGCTCCTAGTAGTGAG...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCTCTCCTGGTCATCCTaGCCATCCCTGGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: RPSQARAIGGGHLEWDLILSWSS*PSLGVG
Trigger: GCCCACGCCCAGGGATGGCCAGGATGACCAGGAGAG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR-3UTR CCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCAGGTCAGCAAAGGCCTaGTGGAGGAGTCCATGTAAG +
Preference number: 2 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGRSAKA*WRSPCK
Trigger: CTTACATGGACTCCTCCACCAGGCCTTTGCTGACCT...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTTGCCTCTCCTTTCTTTaGCTTAGAAGTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPCLSFL*LRSGEG
Trigger: TCCTTCCCCACTTCTAAGCCAAAGAAAGGAGAGGCA...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACGGCAGGCTGCTGTTTaGCAGCTGGAGGTGGCAAGA +
Preference number: 2 (lower is better)
Translates to: ASALCRSTFLSADNVEPSRQAAV*QLEVAR
Trigger: TCTTGCCACCTCCAGCTGCCAAACAGCAGCCTGCCG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR TCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 2 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR TCA 90 bp AGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTGAAGGGCAGCTGGGACCCCCATCCTaGGTATGGCAGAGATGGCAG +
Preference number: 2 (lower is better)
Translates to: REHVHQGDVEKAARGEGQLGPPS*VWQRWQ
Trigger: CTGCCATCTCTGCCATACTCAGGATGGGGGTCCCAG...CTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCACGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 2 (lower is better)
Translates to: PRRARTAPLPRCPHRAEARASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 2 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGAACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 2 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAGGCAAGGCCTCTGCTTaGGACCAGTGCTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PEERVLGSASQLTTRSWGGKASA*DQCCSS
Trigger: GGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCC...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp GTCTCCTCTGCAGCGGGAGAACACCCAACTGGGTACCCAAGGCACTGTGTGTGCTTTGGCAGCTGGAGGTaGCAAGAGCTGCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VSSAAGEHPTGYPRHCVCFGSWR*QELLVL
Trigger: CAGCACCAGCAGCTCTTGCCACCTCCAGCTGCCAAA...GCACACACAGTGCCTTGGGTACCCAGTTGGGTGTTCTCCCGCTGCAGAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CAA 90 bp TGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGGAAATGGTaGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: WSGPAEYLGVSQGKW*GIMASALCRSTFLS
Trigger: GCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR TCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 2 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGTCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 2 (lower is better)
Translates to: WAALEFPAPWILGLLSLPSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTTCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 2 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGGCTCACTATGTGCCTaGTCCAGGAGTCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERGSLCA*SRSPWP
Trigger: GGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCCCCGGGCTCACTATGTaGCTGCTCCAGGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSPGLTM*LLQESL
Trigger: CAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGG...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCAAGCTGCAGAGTAGGCTaGCTCTGGGCCAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: SILLLQGAGASASGKVNPSCRVG*LWARGQ
Trigger: CTGGCCTCTGGCCCAGAGGCAGCCTACTCTGCAGCT...TGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGATGCCTCTCCTTTCTTTaGCTTAGAAGTGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRCLSFL*LRSGEG
Trigger: TCCTTCCCCACTTCTAAGCCAAAGAAAGGAGAGGCA...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGGTGGCAAGAGCTGCTaGTGCTGCCAGGGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSGGKSC*CCQGVL
Trigger: CAACACGCCCTGGCAGCACCAGCAGCTCTTGCCACC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCCAGAATCCCTCTCCTaGTCATCCTGGCCATCCCTG +
Preference number: 2 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIPESLS*SSWPSL
Trigger: CAGGGATGGCCAGGATGACCAGGAGAGGGATTCTGG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR-3UTR CCA 90 bp GTCTCCTCTGCAGCGGGAGAACACCCAACTGGGTACCCAAGGCACTGTGTGTGCCTGGGAAGGAAAGGATaGATAGAGTGCCCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: VSSAAGEHPTGYPRHCVCLGRKG*IECPGE
Trigger: CTCCCCTGGGCACTCTATCCATCCTTTCCTTCCCAG...GCACACACAGTGCCTTGGGTACCCAGTTGGGTGTTCTCCCGCTGCAGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCCACATTCCTGAGCGCTaGCAACGTGGAGCCCTCACC +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERHIPER*QRGALT
Trigger: GGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTG...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp GGTCCTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAGGCTCACTATGTGCCTaGTCCAGGAGTCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: GPLLPRGQGARSPRRCREGSLCA*SRSPWP
Trigger: GGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCC...TTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAGCACCATTACCACGATaGCCGCACAGAGCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PEERVLGSASQLTTRSWGAPLPR*PHRAEA
Trigger: TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGC...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR TCA 90 bp GCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 2 (lower is better)
Translates to: AEYLPPVWREAHSLSQPLYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...GAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
3UTR-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGCTGCTCTTCCTCGCTaGTTACTCCGGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSAALPR*LLREVK
Trigger: CTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp CTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGGCAAGGCCTCTGCTTaGGACCAGTGCTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LFFQEVREHVHQGDVEKAGKASA*DQCCSS
Trigger: GGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCC...GGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERGQLST*ASAKGN
Trigger: ATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGC +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERMASAL*RSTFLS
Trigger: GCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCAT...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp CTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAAT +
Preference number: 2 (lower is better)
Translates to: LFFQEVREHVHQGDVEKAGQLST*ASAKGN
Trigger: ATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCC...GGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCTCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 2 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR TCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 2 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR CCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGAGAGTAGGCTGCCTCTaGGCCAGAGGCCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTRVGCL*ARGQRP
Trigger: TGGCCTCTGGCCTCTGGCCCAGAGGCAGCCTACTCT...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGAATCACAGCAAAGTTaGTATAAAACCATCCAGACC +
Preference number: 2 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERESQQS*YKTIQT
Trigger: GGTCTGGATGGTTTTATAGCAACTTTGCTGTGATTC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGTCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 2 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR CAA 90 bp TTTGGCTGGTGCCCCTCTGCTGATGCCACCCGCCACAACCACCCGCCACGCCCGGCTGCGGGGTCTGTGTaGAGGGCTGAGCACCCCACT +
Preference number: 3 (lower is better)
Translates to: FGWCPSADATRHNHPPRPAAGSV*RAEHPT
Trigger: AGTGGGGTGCTCAGCCCTCAACACAGACCCCGCAGC...CGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 72 bp CCACCCGCCACGCCCGTACCTACTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCAGCGCCCAGTAGGCCC +
Preference number: 3 (lower is better)
Translates to: PPATPVPTPLGD*VQMAKPAPSRP
Trigger: GGGCCTACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGGGCGTGGCGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CAA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGGGCAAGGCCTCTGCTaGGGACCAGTGCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPGQGLC*GPVLLF
Trigger: GAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCC...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR TCA 72 bp TGCGGTAGCCACACCCTTTGGCTGGTGCCCCTCTGCTaGTGCCACCCGCCACAACCACCCGCCACGCCCGTA +
Preference number: 3 (lower is better)
Translates to: CGSHTLWLVPLC*CHPPQPPATPV
Trigger: TACGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAAGGGTGTGGCTACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTaGGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SRPPEGRSRGSP*APAGPDALSAQ
Trigger: CTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 72 bp CGCCACAACCACCCGCCACGCCCGTACCTACTCCCTTaGGGGACTGGGTACAGATGGCGAAGCCAGCGCCCA +
Preference number: 3 (lower is better)
Translates to: RHNHPPRPYLLP*GTGYRWRSQRP
Trigger: TGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGGGCGTGGCGGGTGGTTGTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CAA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCACTGCACCCTGGATCCTaGGGCTGCTCTCACTCCCGG +
Preference number: 3 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPLHPGS*GCSHSR
Trigger: CCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAG...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR TCA 72 bp GGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTaGCAACGTGGAGCCCTCACCGCCCCCACCTACCCC +
Preference number: 3 (lower is better)
Translates to: GFSTLPEHIPER*QRGALTAPTYP
Trigger: GGGGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR TCA 72 bp AGGGCAGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTaGGTACCTGGGCGTCAGCCAAGGGAAATGGTTGGG +
Preference number: 3 (lower is better)
Translates to: RAGPGLAVEWAS*VPGRQPREMVG
Trigger: CCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp AAGGTGACAGGGCGGCAAGGAGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACACTGGGCCCCGGACCC +
Preference number: 3 (lower is better)
Translates to: KVTGRQGEVTTA*LGTGATLGPGP
Trigger: GGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTCTCCTTGCCGCCCTGTCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp GTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAA +
Preference number: 3 (lower is better)
Translates to: VGSSGVPCTLDP*AALTPGVPAGQ
Trigger: TTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp AGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTaGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: SGRWAALEFPAP*ILGLLSLPGSQ
Trigger: CTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp CTGGGGACCAGCAGTGCGGTAGCCACACCCTTTGGCTaGTGCCCCTCTGCTGATGCCACCCGCCACAACCAC +
Preference number: 3 (lower is better)
Translates to: LGTSSAVATPFG*CPSADATRHNH
Trigger: GTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAAGGGTGTGGCTACCGCACTGCTGGTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp GCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTCTTCCTCGCTGCTTAC +
Preference number: 3 (lower is better)
Translates to: ALTPGVPAGQGL*LGPVLLFLAAY
Trigger: GTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp CTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTGAAGGGAGGTCCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LRSIGQSRPGAG*QSRPPEGRSRG
Trigger: ACCTCTGGACCTCCCTTCAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CAA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTTGGGTGGGCACTGTGTaGGCCACTGGAAATACAGCA +
Preference number: 3 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPWVGTV*ATGNTA
Trigger: TGCTGTATTTCCAGTGGCCAACACAGTGCCCACCCA...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp AGAGGTGAAGGGCAGGACCCAGGCTGCCGTCTCCTCTaGAGCGGGAGAACACCCAACTGGGTACCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: RGEGQDPGCRLL*SGRTPNWVPKA
Trigger: TGCCTTGGGTACCCAGTTGGGTGTTCTCCCGCTGCAGAGGAGACGGCAGCCTGGGTCCTGCCCTTCACCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CAA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCAGTGACAAGGGTGGGTaGGGCAGCTGGGGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLSDKGG*GSWGPE
Trigger: TTCTGGGCCCCAGCTGCCCAACCCACCCTTGTCACT...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR TCA 72 bp GGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTaGGCGCTGACAACGTGGAGCCCTCACCGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: GLWLQHSAGAHS*ALTTWSPHRPH
Trigger: GTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR TCA 72 bp GAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTaGTGCCCTGAGTGCTCAGGTACGATATACACACTG +
Preference number: 3 (lower is better)
Translates to: EVQRFTLRPSGA*CPECSGTIYTL
Trigger: CAGTGTGTATATCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp AGGCCTCTGCTTGGGACCAGTGCTGCTCTTCCTCGCTaGTTACTCCGGGAGGTGAAGGTGACAGGGCGGCAA +
Preference number: 3 (lower is better)
Translates to: RPLLGTSAALPR*LLREVKVTGRQ
Trigger: TTGCCGCCCTGTCACCTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR GCA 72 bp TCCCAGCAGGGCAAGGCCTCTGCTTGGGACCAGTGCTaGTCTTCCTCGCTGCTTACTCCGGGAGGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: SQQGKASAWDQC*SSSLLTPGGEG
Trigger: ACCTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp CACACCACATACATCCACACGCACCTCCCTCCTGTCTaGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCC +
Preference number: 3 (lower is better)
Translates to: HTTYIHTHLPPV*REAHSLSQPLA
Trigger: GGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGATGTATGTGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp GCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAATGGTTGGGGATTATGG +
Preference number: 3 (lower is better)
Translates to: ARPGCGVGQLST*ASAKGNGWGLW
Trigger: CCATAATCCCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp TCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATaGTTGTCAGGAGCCCGATCTGCAGGGAGGGGAGCC +
Preference number: 3 (lower is better)
Translates to: SPHGGSHAGGWP*LSGARSAGRGA
Trigger: GGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp GCTGCCCTACAAGCGCTCACCTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTTGTCAGGAGCCCGATC +
Preference number: 3 (lower is better)
Translates to: AALQALTSWGIS*RRMAMVVRSPI
Trigger: GATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGAGCGCTTGTAGGGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 72 bp AGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATaGGATCTCATCCAGGGCACCAGGGCAGTGACAAGG +
Preference number: 3 (lower is better)
Translates to: SQARAIGGGHLE*DLIQGTRAVTR
Trigger: CCTTGTCACTGCCCTGGTGCCCTGGATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR CCA 72 bp TCACTCACACACTCACAGGCGCTGGGAAGGAAAGGATaGATAGAGTGCCCAGGGGAGCAGGCCCAGGAACCA +
Preference number: 3 (lower is better)
Translates to: SLTHSQALGRKG*IECPGEQAQEP
Trigger: TGGTTCCTGGGCCTGCTCCCCTGGGCACTCTATCCATCCTTTCCTTCCCAGCGCCTGTGAGTGTGTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR-3UTR CAA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTGCA +
Preference number: 3 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSGGWPW*SGARSA
Trigger: TGCAGATCGGGCTCCTGACAACCATGGCCATCCTCC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR TCA 72 bp GTGCCCAGGGGAGCAGGCCCAGGAACCAAATTTAGATaGGGAGGTCAGCAAAGGCCTGGTGGAGGAGTCCAT +
Preference number: 3 (lower is better)
Translates to: VPRGAGPGTKFR*GGQQRPGGGVH
Trigger: ATGGACTCCTCCACCAGGCCTTTGCTGACCTCCTCATCTAAATTTGGTTCCTGGGCCTGCTCCCCTGGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR TCA 72 bp ACTCGCCCACTCATTCCACAGAGGTTTACTCTGCTCTaGGCTGGCTCTGGGTGGGCACTGTGTTGGCCACTG +
Preference number: 3 (lower is better)
Translates to: TRPLIPQRFTLL*AGSGWALCWPL
Trigger: CAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCTCTGTGGAATGAGTGGGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp GGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCACAGAGTGAATCCGAG +
Preference number: 3 (lower is better)
Translates to: GGSFSLAATRPL*LSHMRSQSESE
Trigger: CTCGGATTCACTCTGTGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
3UTR-3UTR CAA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGTTGAGAGTTGCAGCTaGGCTGCGCTCCATCGGTCA +
Preference number: 3 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERVESCS*AALHRS
Trigger: TGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAAC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 72 bp CAGCTGAGTACCTGGGCGTCAGCCAAGGGAAATGGTTaGGGATTATGGCTTCAGCACTCTGCCGGAGCACAT +
Preference number: 3 (lower is better)
Translates to: QLSTWASAKGNG*GLWLQHSAGAH
Trigger: ATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR TCA 72 bp GGGTGGGCACTGTGTTGGCCACTGGAAATACAGCAGTaGCTAAAGGGGACAAGGAACCTGCCTTCACGAAGC +
Preference number: 3 (lower is better)
Translates to: GWALCWPLEIQQ*LKGTRNLPSRS
Trigger: GCTTCGTGAAGGCAGGTTCCTTGTCCCCTTTAGTCACTGCTGTATTTCCAGTGGCCAACACAGTGCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR GCA 72 bp CAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGCGCTGACAACGTGGAG +
Preference number: 3 (lower is better)
Translates to: QGKWLGIMASAL*RSTFLSADNVE
Trigger: CTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CCA 72 bp CCCACTCATTCCACAGAGGTTTACTCTGCTCTGAGCTaGCTCTGGGTGGGCACTGTGTTGGCCACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: PTHSTEVYSALS*LWVGTVLATGN
Trigger: ATTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCTCTGTGGAATGAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CCA 72 bp CATTCCACAGAGGTTTACTCTGCTCTGAGCTGGCTCTaGGTGGGCACTGTGTTGGCCACTGGAAATACAGCA +
Preference number: 3 (lower is better)
Translates to: HSTEVYSALSWL*VGTVLATGNTA
Trigger: TGCTGTATTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCTCTGTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCCCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGCGCCCCAGCGGGGCCTaGTGCCCTGAGTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRRPSGA*CPECSG
Trigger: ACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCG...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGGCATGCCACGTACGTaGGGCGGCGGCGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRGMPRT*GGGGGD
Trigger: ATCGCCGCCGCCGCCGCCGCACGTACGTGGCATGCC...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS-3UTR GCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCGGGCAGGACCCAGGCTaGCGTCTCCTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGGQDPG*RLLCSG
Trigger: CCCGCTGCAGAGGAGACGGCAGCCTGGGTCCTGCCC...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTGGCTGGGCCAGACAGTaGCCTCCATTGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPGWARQ*PPLSAA
Trigger: CGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCC...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAAGCCGCCCCAGCCTTaGCCCCTAGGCCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPKPPQP*PLGRLG
Trigger: CCCCAGGCGGCCTAGGGGCCAAGGCTGGGGCGGCTT...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAAAGCCGCCCCAGCCTTaGCCCCTAGGCCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPKPPQP*PLGRLG
Trigger: CCCCAGGCGGCCTAGGGGCCAAGGCTGGGGCGGCTT...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCCTGGGGCTGCTCCCTaGCCGGCAGGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGPGAAP*PAGCCL
Trigger: CAAACAGCAGCCTGCCGGGCAGGGAGCAGCCCCAGG...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGCCTGGGGCTGCTCCCTaGCCGGCAGGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRPGAAP*PAGCCL
Trigger: CAAACAGCAGCCTGCCGGGCAGGGAGCAGCCCCAGG...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCTCTCTGGCCTGGGGCTaGTCCCTGCCCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCSLAWG*SLPGRL
Trigger: CAGCCTGCCGGGCAGGGAGCAGCCCCAGGCCAGAGA...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTCTGGCCTGGGGCTaGTCCCTGCCCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALSLAWG*SLPGRL
Trigger: CAGCCTGCCGGGCAGGGAGCAGCCCCAGGCCAGAGA...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGGGACAGGCGCTACACTaGGCCCCGGACCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRGQALH*APDPAQ
Trigger: CTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCC...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
3UTR CAA 72 bp CCGCCACAACCACCCGCCACGCCCGTACCTACTCCCTaGGGGGACTGGGTACAGATGGCGAAGCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PPQPPATPVPTP*GDWVQMAKPAP
Trigger: GGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGGGCGTGGCGGGTGGTTGTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKESRQR*RAGPRL
Trigger: CAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGCGTGTTGGCCAGGAATaGGCTCCCAGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRRVGQE*APRAAL
Trigger: CAGGGCTGCCCTGGGAGCTCATTCCTGGCCAACACG...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGCTGGGACCCCCATCCTaGGTATGGCAGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLLGPPS*VWQRWQ
Trigger: CTGCCATCTCTGCCATACTCAGGATGGGGGTCCCAG...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTCCCCTAAGGGCCCTGTaGGTGGCAGTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPPLRAL*VAVLFL
Trigger: GAGGAAGAGGACTGCCACTCACAGGGCCCTTAGGGG...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGGCATGCCACGTACGTaGGGCGGCGGCGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLGMPRT*GGGGGD
Trigger: ATCGCCGCCGCCGCCGCCGCACGTACGTGGCATGCC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp AGTCGCCCACCTGAAGGGAGGTCCAGAGGTTCACCCTGCGCCCCAGCGGGGCCTCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SRPPEGRSRGSPCAPAGPRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...AGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGACCTCCCTTCAGGTGGGCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCACAAAAGGCCACCGTaGGGCGGCGGCGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLHKRPP*GGGGGD
Trigger: ATCGCCGCCGCCGCCGCCGCACGGTGGCCTTTTGTG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS-3UTR GCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCGAGGGGAGCCGTGGCTaGGGGGTCTGTGTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTEGSRG*GVCVEG
Trigger: GCCCTCAACACAGACCCCGCAGCCACGGCTCCCCTC...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCCCAAGGCACTGTGTGTaGTCCCCACCTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGPRHCV*SPPPGP
Trigger: AGGCCCGGGAGGTGGGGAGCACACACAGTGCCTTGG...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp TTTGGCTGGTGCCCCTCTGCTGATGCCACCCGCCACAACCACCCGCCACGCCCGGCTGCCAGGGCGTGTTaGCCAGGAATGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FGWCPSADATRHNHPPRPAARAC*PGMSSQ
Trigger: CTGGGAGCTCATTCCTGGCCAACACGCCCTGGCAGC...CGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCGGCCAGGCCTGGCTGTaGAGTGGGCCAGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSGQAWL*SGPAEY
Trigger: GTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCC...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGGGGCAGGGCCAGGCCTaGCTGTGGAGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSGQGQA*LWSGPA
Trigger: AGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCC...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGGGCAGGGCCAGGCCTaGCTGTGGAGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLGQGQA*LWSGPA
Trigger: AGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTGACAGTGGCCTCCATTaGGCGCGGCGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPDSGLH*ARRQQQ
Trigger: CTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTC...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGACGTGTTGGCCAGGAATaGGCTCCCAGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRRVGQE*APRAAL
Trigger: CAGGGCTGCCCTGGGAGCTCATTCCTGGCCAACACG...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGGCCGGAGCACATTCCTaGGCGCTGACAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRAGAHS*ALTTWS
Trigger: GCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGC...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGTGGAGTGGGCCAGCTaGGTACCTGGGCGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRVEWAS*VPGRQP
Trigger: TGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCAC...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCGTCTGTGTTGAGGGCTaGGCACCCCACTCGCCCACT +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSVCVEG*APHSPT
Trigger: AGTGGGCGAGTGGGGTGCTCAGCCCTCAACACAGAC...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCAGGGACATCCAGGCATaGCACGTACGTGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTRDIQA*HVRAAA
Trigger: CGCCGCCGCACGTACGTGGCATGCCTGGATGTCCCT...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS-3UTR GCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCHQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAHQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTG...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGGAGTTGCAGCTTGGCTaGGCTCCATCGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLELQLG*APSVKA
Trigger: GGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTC...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGGGCTGCCGTCTCCTCTaGAGCGGGAGAACACCCAAC +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRGCRLL*SGRTPN
Trigger: GTTGGGTGTTCTCCCGCTGCAGAGGAGACGGCAGCC...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CTGTTGAGAGTTGCAGCTTGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGGCAGGACCCAGGCTaGCGTCTCCTCTGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LLRVAAWLRSIGQSRPGAGQDPG*RLLCSG
Trigger: CCCGCTGCAGAGGAGACGGCAGCCTGGGTCCTGCCC...TGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCAGCAGAAGCAGCTGCTaGAGGGAGCGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCSRSSC*RERHGS
Trigger: GGACCCGTGGCGCTCCCTGCAGCAGCTGCTTCTGCT...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCTGGATCCTTGGGCTaGTCTCACTCCCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCPGSLG*SHSRGP
Trigger: GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCGGAGGTGGCAAGAGCTaGTGGTGCTGCCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPGGGKS*WCCQGV
Trigger: CACGCCCTGGCAGCACCAGCAGCTCTTGCCACCTCC...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CTGTTGAGAGTTGCAGCTTGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCATCTCTGGCCTGGGGCTaGTCCCTGCCCGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRVAAWLRSIGQSRPGASLAWG*SLPGRL
Trigger: CAGCCTGCCGGGCAGGGAGCAGCCCCAGGCCAGAGA...TGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPEEEEP*ARHATA
Trigger: GGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTC...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCACCACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLPHHQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGG...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGCGGCGGCAGCAGCAGTaGGGTCTTTGTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRRRQQQ*GLCWGP
Trigger: AGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCG...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCGGCGGCAGCAGCAGTaGGGTCTTTGTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCRRQQQ*GLCWGP
Trigger: AGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGGCTGGGCCAGACAGTaGCCTCCATTGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLGWARQ*PPLSAA
Trigger: CGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTGGACAGGCGCTACACTaGGCCCCGGACCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPGQALH*APDPAQ
Trigger: CTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCC...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGCTLDP*AALTPG
Trigger: CCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGAGTGCTGAGTGGGGCTaGGGTACAGGAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKSAEWG*GTGAPA
Trigger: GGCAGGTGCTCCTGTACCCCAGCCCCACTCAGCACT...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGCTGCCAGGGCGTGTTaGCCAGGAATGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKAARAC*PGMSSQ
Trigger: CTGGGAGCTCATTCCTGGCCAACACGCCCTGGCAGC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGGTGGCAAGAGCTGCTaGTGCTGCCAGGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKGGKSC*CCQGVL
Trigger: CAACACGCCCTGGCAGCACCAGCAGCTCTTGCCACC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GGGCCAGCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GPAEYLPPVWREAHSLSQPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...CTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR TCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TTTGGCTGGTGCCCCTCTGCTGATGCCACCCGCCACAACCACCCGCCACGCCCGCAGCCAGCCCGTGGGTaGAGTTATCGATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FGWCPSADATRHNHPPRPQPARG*SYRWCW
Trigger: CCAACACCATCGATAACTTCACCCACGGGCTGGCTG...CGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCGTGTTGGCCAGGAATaGGCTCCCAGGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAARVGQE*APRAAL
Trigger: CAGGGCTGCCCTGGGAGCTCATTCCTGGCCAACACG...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCCACATTCCTGAGCGCTaGCAACGTGGAGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSHIPER*QRGALT
Trigger: GGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTG...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGTGGAGTGGGCCAGCTaGGTACCTGGGCGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPVEWAS*VPGRQP
Trigger: TGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCAC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPHQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTG...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGAGCGCTGTTGAGAGTTaGAGCTTGGCTGCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLSAVES*SLAALH
Trigger: ATGGAGCGCAGCCAAGCTGCAACTCTCAACAGCGCT...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAGGCTGCCGTCTCCTCTaGAGCGGGAGAACACCCAAC +
Preference number: 4 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPGCRLL*SGRTPN
Trigger: GTTGGGTGTTCTCCCGCTGCAGAGGAGACGGCAGCC...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGAGCAGAAGCAGCTGCTaGAGGGAGCGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSSRSSC*RERHGS
Trigger: GGACCCGTGGCGCTCCCTGCAGCAGCTGCTTCTGCT...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354884.8
ENST00000362021.9
CDS-3UTR GCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTATCCGAGCATCTTATTaGTGCAGGGGGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPIRASY*CRGQGR
Trigger: ACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGAT...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGCCCGGGCTCACTATGTaGCTGCTCCAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRPGLTM*LLQESL
Trigger: CAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGG...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCAGCAGAAGCAGCTGCTaGAGGGAGCGCCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSASRSSC*RERLWG
Trigger: TCCCCACAGGCGCTCCCTGCAGCAGCTGCTTCTGCT...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCTGCCCCTCACCACCTaGAGGGGGCGGCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLLPLTT*RGRQCQ
Trigger: CTGGCATTGCCGCCCCCTGCAGGTGGTGAGGGGCAG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPEEEEP*ARHATA
Trigger: GGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTC...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACCTCACCACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPPHHQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGG...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCGGCGGCAGCAGCAGTaGGGTCTTTGTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLRRQQQ*GLCWGP
Trigger: AGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTACTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPTPLGD*VQMAKP
Trigger: TGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGT...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGACCCAACTACTCCCTTaGGGGACTGGGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLTQLLP*GTGYRW
Trigger: CCATCTGTACCCAGTCCCCCAAGGGAGTAGTTGGGT...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS-3UTR CCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTCTLDP*AALTPG
Trigger: CCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCAAGCCGCCCCAGCCTTaGCCCCTAGGCCGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVKPPQP*PLGRLG
Trigger: CCCCAGGCGGCCTAGGGGCCAAGGCTGGGGCGGCTT...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGGTGGCAAGAGCTGCTaGTGCTGCCAGGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCGGKSC*CCQGVL
Trigger: CAACACGCCCTGGCAGCACCAGCAGCTCTTGCCACC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGGCCAGGCCTGGCTGTaGAGTGGGCCAGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLGQAWL*SGPAEY
Trigger: GTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGAGCCACACCCTTTGGCTaGTGCCCCTCTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRATPFG*CPSADA
Trigger: GGCATCAGCAGAGGGGCACCAGCCAAAGGGTGTGGC...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGAGAGTAGGCTGCCTCTaGGCCAGAGGCCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRRVGCL*ARGQRP
Trigger: TGGCCTCTGGCCTCTGGCCCAGAGGCAGCCTACTCT...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCSCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCGAGTTGCAGCTTGGCTaGGCTCCATCGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSELQLG*APSVKA
Trigger: GGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTC...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACCTGGATCCTTGGGCTaGTCTCACTCCCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPPGSLG*SHSRGP
Trigger: GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGG...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCAGCTCTGGAGTTCCCTaGACCCTGGATCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGSSGVP*TLDPWA
Trigger: AGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCT...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTAAGAGCTGCTGGTGCTaGCAGGGCGTGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAKSCWC*QGVLAR
Trigger: CCTGGCCAACACGCCCTGGCAGCACCAGCAGCTCTT...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGAAGAGCTGCTGGTGCTaGCAGGGCGTGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLKSCWC*QGVLAR
Trigger: CCTGGCCAACACGCCCTGGCAGCACCAGCAGCTCTT...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCAGGAGGTGGCAAGAGCTaGTGGTGCTGCCAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPGGGKS*WCCQGV
Trigger: CACGCCCTGGCAGCACCAGCAGCTCTTGCCACCTCC...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGGGCTCACTATGTGCCTaGTCCAGGAGTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSGSLCA*SRSPWP
Trigger: GGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCC...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGGGCAGGACCCAGGCTaGCGTCTCCTTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASGQDPG*RLLPLG
Trigger: CCCCAAGGGAAGGAGACGGCAGCCTGGGTCCTGCCC...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLEEEEP*ARHATA
Trigger: GGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCACTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGTPLGD*VQMAKP
Trigger: TGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGT...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCGGCAAGGCCTCTGCTTaGGACCAGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALGKASA*DQCCSS
Trigger: GGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCC...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGGAGTTCCCTGCACCCTaGATCCTTGGGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHREFPAP*ILGLLS
Trigger: TGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTC...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGAGGTGGGCAGCTCTaGAGTTCCCTGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPGGGQL*SSLHPG
Trigger: TCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGAGTGCTGAGTGGGGCTaGGGTACAGGAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSSAEWG*GTGAPA
Trigger: GGCAGGTGCTCCTGTACCCCAGCCCCACTCAGCACT...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCAGTGCTGAGTGGGGCTaGGGTACAGGAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLSAEWG*GTGAPA
Trigger: GGCAGGTGCTCCTGTACCCCAGCCCCACTCAGCACT...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCCGGCAGGCTGCTGTTTaGCAGCTGGAGGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPRQAAV*QLEVAR
Trigger: TCTTGCCACCTCCAGCTGCCAAACAGCAGCCTGCCG...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGGGCAGGGCCAGGCCTaGCTGTGGAGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIGQGQA*LWSGPA
Trigger: AGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACTCACGGTGGAGGCATaGGCAGGGGGAGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSLTVEA*AGGAGS
Trigger: GCTGCCTGCTCCCCCTGCCCATGCCTCCACCGTGAG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCTCTCCTGGTCATCCTaGCCATCCCTGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLLSWSS*PSLGVG
Trigger: GCCCACGCCCAGGGATGGCCAGGATGACCAGGAGAG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR CAA 72 bp CCTCATGGGGGATCTCATGCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTGCAGGGAGGGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PHGGSHAGGWPW*SGARSAGRGAV
Trigger: CACGGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCCCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR TCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGATGGCAGGAGCATCCCTaGGCTGGACCGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGWQEHP*AGPGGL
Trigger: GAGGCCTCCCGGTCCAGCTCAGGGATGCTCCTGCCA...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCACATTCCTGAGCGCTaGCAACGTGGAGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLHIPER*QRGALT
Trigger: GGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAAGGTTTACTCTGCTCTaGGCTGGCTCTGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPRFTLL*AGSGWA
Trigger: TGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACCT...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACTGGTGCCCCTCTGCTaGTGCCACCCGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSLVPLC*CHPPQP
Trigger: TGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp GCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGTGGAGTGGGCCAGCTaGGTACCTCCCTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: AEYLPPVWREAHSLSQPLVEWAS*VPPSCL
Trigger: CAGACAGGAGGGAGGTACTCAGCTGGCCCACTCCAC...GAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSSCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLSCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCTGCTCTTCCTCGCTaGTTACTCCGGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRAALPR*LLREVK
Trigger: CTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGC...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCTCTGCTTGGGACCAGTaGTGCTCTTCCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGSAWDQ*CSSSLL
Trigger: AAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGA...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCAGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPAGQGL*LGPVLL
Trigger: GAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGC...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACCCGGGCTCACTATGTaGCTGCTCCAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPPGLTM*LLQESL
Trigger: CAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGG...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCAGCCCCTCACCTTCTTaGTCACAAGGAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSSPSPS*SQGSWQ
Trigger: CTGCCAGCTTCCTTGTGAGCAAGAAGGTGAGGGGCT...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCATCCAGAGGTTCACCCTaGGCCCCAGCGGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSSRGSP*APAGPD
Trigger: ATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCTGGA...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCTGCAGGGGGCGGCAATaGCAGGCCAGGCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLICRGRQ*QARPGQ
Trigger: TTGGCCTGGCCTGGCCTGGCATTGCCGCCCCCTGCA...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCTCCTGGCACTGTCTTaGCCCTGGCGTGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLLLALS*PWRVAS
Trigger: TGAGGCCACACGCCAGGGGCAAGACAGTGCCAGGAG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKLLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGACCTCACCACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGPHHQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGG...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGGCTGGGCCAGACAGTaGCCTCCATTGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIGWARQ*PPLSAA
Trigger: CGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGCCACAGCCAGCCCGTaGGTGAAGTTATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCATASP*VKLSMV
Trigger: CACCATCGATAACTTCACCCACGGGCTGGCTGTGGC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGAAGTCGCCCACCTCATaGGGGATCTCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRKSPTS*GISCRR
Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGGGCGACTT...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354884.8
ENST00000362021.9
CDS-3UTR CCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGACTGGGTACAGATaGCGAAGCCAGCGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPGTGYR*RSQRPV
Trigger: TACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGGGACTGGGTACAGATaGCGAAGCCAGCGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLGTGYR*RSQRPV
Trigger: TACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGACTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRTPLGD*VQMAKP
Trigger: TGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGT...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACA +
Preference number: 4 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPEVTTA*LGTGAT
Trigger: TGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCGQLST*ASAKGN
Trigger: ATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGGGGCAGGGCCAGGCCTaGCTGTGGAGTGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EEREQHHYHDARTEQKQLGQGQA*LWSGPA
Trigger: AGCTGGCCCACTCCACAGCCAGGCCTGGCCCTGCCC...CAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCACAGGTCTCCTCTACTCCCTTaGGGGACTGGGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: NHSMAGDRRYTGPRTQHRSPLLP*GTGYRW
Trigger: CCATCTGTACCCAGTCCCCCAAGGGAGTAGAGGAGA...CCTGTGCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS-3UTR CCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTACTCTGCTCTGAGCTaGCTCTGGGTGGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALYSALS*LWVGTV
Trigger: CACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTA...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCAAGCGCTCACCTCATaGGGGATCTCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCQALTS*GISCRR
Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGAGCGCTTG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTGAA +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPRPGAG*QSRPPE
Trigger: TTCAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCG...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp AGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTGAAGGGCAGGGGAACGGCTCACGGTaGAGGCATGGGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: REHVHQGDVEKAARGEGQGNGSR*RHGQGE
Trigger: CTCCCCCTGCCCATGCCTCCACCGTGAGCCGTTCCC...CTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCGCCAACTTCTCCCTaGTGGCCCAGCTTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCPPTSP*WPSLSS
Trigger: AGAAGACAAGCTGGGCCACCAGGGAGAAGTTGGCGG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCTTGCCCCTGGCGTGTaGCCTCACTTACCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLLAPGV*PHLPGL
Trigger: CAGCCCTGGTAAGTGAGGCCACACGCCAGGGGCAAG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCCCATCTCTAGGGGAATaGCAAGCAACGGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTPSLGE*QATGRP
Trigger: GGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGG...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCCCATCTCTAGGGGAATaGCAAGCAACGGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALPSLGE*QATGRP
Trigger: GGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGG...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGACCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGCAGCCAGCCCGTGGGTaGAGTTATCGATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPQPARG*SYRWCW
Trigger: CCAACACCATCGATAACTTCACCCACGGGCTGGCTG...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGGCATGCCACGTACGTaGGGCGGCGGCGGCGGCGAT +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIGMPRT*GGGGGD
Trigger: ATCGCCGCCGCCGCCGCCGCACGTACGTGGCATGCC...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp GGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGCGAGAACAGCAGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GAGASASGKVNPRRARTAAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...TGCTGTTCTCGCTCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCGGAGCCCGATCTTCTTaGTCACAAGGAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAGARSS*SQGSWQ
Trigger: CTGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCC...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR GCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGGAGTTGCAGCTTGGCTaGGCTCCATCGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLELQLG*APSVKA
Trigger: GGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTC...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GGGCCAGCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGGAGTTGCAGCTTGGCTaGGCTCCATCGGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GPAEYLPPVWREAHSLSQELQLG*APSVKA
Trigger: GGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTC...CTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCGCACCATTACCACGATaGCCGCACAGAGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPAPLPR*PHRAEA
Trigger: TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGC...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCGCTTGGGACCAGTGCTaGTCTTCCTCGCTGCTTACT +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAAWDQC*SSSLLT
Trigger: AGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGC...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCTGCTTGGGACCAGTaGTGCTCTTCCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSASAWDQ*CSSSLL
Trigger: AAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGA...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGGCAAGAGCTGCTGGTaGTGCCAGGGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIGKSCW*CQGVLA
Trigger: GGCCAACACGCCCTGGCAGCACCAGCAGCTCTTGCC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGGGCCCCTGGGGGCTaGCCTACAAGCGCTCACCTC +
Preference number: 4 (lower is better)
Translates to: TKSENSTITTMPAQSRSSWAPGG*PTSAHL
Trigger: GAGGTGAGCGCTTGTAGGGCAGCCCCCAGGGGCCCA...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAAGCCCCAGAGTGCCATaGTGGACAGGCCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGSPRVP*WTGPAP
Trigger: TGGGGCTGGGCCTGTCCAGCATGGCACTCTGGGGCT...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCTGCTGCTGCAGGCTCTaGCCCTCACCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLICCCRL*PSPPAG
Trigger: CCCTGCAGGTGGTGAGGGGCAGAGCCTGCAGCAGCA...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCLLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCCCTCACCACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAPHHQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGG...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGGCCACAGCCAGCCCGTaGGTGAAGTTATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLATASP*VKLSMV
Trigger: CACCATCGATAACTTCACCCACGGGCTGGCTGTGGC...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACA +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPEVTTA*LGTGAT
Trigger: TGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTGAGTTCCCTGCACCCTaGATCCTTGGGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAEFPAP*ILGLLS
Trigger: TGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTC...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAGGAGGTGGGCAGCTCTaGAGTTCCCTGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSGGGQL*SSLHPG
Trigger: TCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCC...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGTGCCTCTCCTTTCTTTaGCTTAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLCLSFL*LRSGEG
Trigger: TCCTTCCCCACTTCTAAGCCAAAGAAAGGAGAGGCA...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTTTTGGCAGCTGGAGGTaGCAAGAGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPFGSWR*QELLVL
Trigger: CAGCACCAGCAGCTCTTGCCACCTCCAGCTGCCAAA...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGTTTGGCAGCTGGAGGTaGCAAGAGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSFGSWR*QELLVL
Trigger: CAGCACCAGCAGCTCTTGCCACCTCCAGCTGCCAAA...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCTTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPLPLGD*VQMAKP
Trigger: TGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAAG...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCGCCCAGAACTCCCACTaGGACCAGGGCCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIAQNSH*DQGPET
Trigger: GGTCTCTGGGCCCTGGTCCCAGTGGGAGTTCTGGGC...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
3UTR CAA 72 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTaGGAATGGGATCTCATCCAGGGCACCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGH*EWDLIQGTRAV
Trigger: CACTGCCCTGGTGCCCTGGATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TKSENSTITTMPAQSRSSPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp GGTCCTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAACCCCCAGGGCGAAGCTaGGCAGCTGCTTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GPLLPRGQGARSPRRCREPPGRS*AAASGA
Trigger: GGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGG...TTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGACAGTGGCCTCCATTaGGCGCGGCGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSDSGLH*ARRQQQ
Trigger: CTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGESRQR*RAGPRL
Trigger: CAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGGCAGGAGCATCCCTaGGCTGGACCGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERWQEHP*AGPGGL
Trigger: GAGGCCTCCCGGTCCAGCTCAGGGATGCTCCTGCCA...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGGCAGGAGCATCCCTaGGCTGGACCGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSWQEHP*AGPGGL
Trigger: GAGGCCTCCCGGTCCAGCTCAGGGATGCTCCTGCCA...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGCCGGAGCACATTCCTaGGCGCTGACAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIAGAHS*ALTTWS
Trigger: GCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCAGGCATGCCACGTACTaGAAAACACAAAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGRHATY*KTQKAT
Trigger: GGTGGCCTTTTGTGTTTTTCAGTACGTGGCATGCCT...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS-3UTR TCA 90 bp TGGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTCTGGAAATACAGCAGTaGCTAAAGGGGACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: WAGLPGLTMCLLQESLAPLEIQQ*LKGTRN
Trigger: GTTCCTTGTCCCCTTTAGTCACTGCTGTATTTCCAG...AGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTGGTCCCCTCCTCCTTaGTGTCCAGGAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALWSPPP*CPGTSS
Trigger: AGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCA...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRSWGIS*RRMAMV
Trigger: AACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: HLPPVWREAHSLSQPLALSWGIS*RRMAMV
Trigger: AACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...GAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCAGCAGAAGCAGCTGCTaGAGGGAGCGCCACGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKSENSTITTMPAQSRSSSRSSC*RERHGS
Trigger: GGACCCGTGGCGCTCCCTGCAGCAGCTGCTTCTGCT...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCTCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGTCTGCTTGGGACCAGTaGTGCTCTTCCTCGCTGCTT +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSSAWDQ*CSSSLL
Trigger: AAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGCAGA...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTGAAGGGCAGGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: REHVHQGDVEKAARGEGQAGQGL*LGPVLL
Trigger: GAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGC...CTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCACCTGGATCCTTGGGCTaGTCTCACTCCCGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PRRARTAPLPRCPHRAEAPGSLG*SHSRGP
Trigger: GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGG...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGGGTACAGGAGCACCTaGCTCTCCTTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCGYRST*LSFLWL
Trigger: AAGCCAAAGAAAGGAGAGGCAGGTGCTCCTGTACCC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGGCAAGAGCTGCTGGTaGTGCCAGGGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGGKSCW*CQGVLA
Trigger: GGCCAACACGCCCTGGCAGCACCAGCAGCTCTTGCC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCGGCAAGAGCTGCTGGTaGTGCCAGGGCGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCGKSCW*CQGVLA
Trigger: GGCCAACACGCCCTGGCAGCACCAGCAGCTCTTGCC...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCCCTGGGGCTGCTCCCTaGCCGGCAGGCTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSPGAAP*PAGCCL
Trigger: CAAACAGCAGCCTGCCGGGCAGGGAGCAGCCCCAGG...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGGCTCACTATGTGCCTaGTCCAGGAGTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIGSLCA*SRSPWP
Trigger: GGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPMASAL*RSTFLS
Trigger: GCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCAT...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGAGCCCAGCCCCAGAGTaGCATGCTGGACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EEREQHHYHDARTEQKQLSPAPE*HAGQAQ
Trigger: CTGGGCCTGTCCAGCATGGCACTCTGGGGCTGGGCT...CAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCTACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIYQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTA...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAEEEEP*ARHATA
Trigger: GGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTC...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPLLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGACCTCACCACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRPHHQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGG...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCACGGCGGCAGCAGCAGTaGGGTCTTTGTTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRRARTAPLPRCPHRAEARRQQQ*GLCWGP
Trigger: AGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCG...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAGGCTGGGCCAGACAGTaGCCTCCATTGAGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRGWARQ*PPLSAA
Trigger: CGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCC...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp GCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCACAGCCAGCCCGTaGGTGAAGTTATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: AEYLPPVWREAHSLSQPLATASP*VKLSMV
Trigger: CACCATCGATAACTTCACCCACGGGCTGGCTGTGGC...GAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCCGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVRPGAG*QSRPPH
Trigger: ATGAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCG...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGGGACTGGGTACAGATaGCGAAGCCAGCGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASGTGYR*RSQRPV
Trigger: TACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCC...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGGCAAGGCCTCTGCTTaGGACCAGTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASGKASA*DQCCSS
Trigger: GGAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCC...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGAGGTGGGCAGCTCTaGAGTTCCCTGCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVGGGQL*SSLHPG
Trigger: TCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCC...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCCTCACTACTAGGAGCTaGGGACTGTCAGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPLTTRS*GLSVLS
Trigger: ACTCAGCACTGACAGTCCCCAGCTCCTAGTAGTGAG...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCACTACTAGGAGCTaGGGACTGTCAGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCLTTRS*GLSVLS
Trigger: ACTCAGCACTGACAGTCCCCAGCTCCTAGTAGTGAG...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCTCACTACTAGGAGCTaGGGACTGTCAGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSALTTRS*GLSVLS
Trigger: ACTCAGCACTGACAGTCCCCAGCTCCTAGTAGTGAG...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAGGTGGCAAGAGCTGCTaGTGCTGCCAGGGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGGGKSC*CCQGVL
Trigger: CAACACGCCCTGGCAGCACCAGCAGCTCTTGCCACC...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGCGGCAGGCTGCTGTTTaGCAGCTGGAGGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASRQAAV*QLEVAR
Trigger: TCTTGCCACCTCCAGCTGCCAAACAGCAGCCTGCCG...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GGTTTACTCTGCTCTGAGCTGGCTCTGGGTGGGCACTGTGTTGGCCACTGGAAAGGCCAGGCCTGGCTGTaGAGTGGGCCAGCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GLLCSELALGGHCVGHWKGQAWL*SGPAEY
Trigger: GTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCC...TTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCCCAACAAGGAGTACTaGGAACAGGAACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAPNKEY*EQEQTR
Trigger: CCTGGTCTGTTCCTGTTCCCAGTACTCCTTGTTGGG...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCAGGTCAGCAAAGGCCTaGTGGAGGAGTCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTRSAKA*WRSPCK
Trigger: CTTACATGGACTCCTCCACCAGGCCTTTGCTGACCT...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCCCAACTTCTCCCTGGTaGCCCAGCTTGTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAPTSPW*PSLSSE
Trigger: TTCAGAAGACAAGCTGGGCCACCAGGGAGAAGTTGG...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp GGAGTGGGCCAGCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTTCTCAGGGCTGCCTCTaGTGCCTGTCCCACTTCATG +
Preference number: 4 (lower is better)
Translates to: GVGQLSTSLLSGGRLILSSQGCL*CLSHFM
Trigger: CATGAAGTGGGACAGGCACCAGAGGCAGCCCTGAGA...AGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGCTGGCCCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCTCACTTACCAGGGCTaGCGCTGCACGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLILTYQG*RCTCRP
Trigger: GGGCCTACACGTGCAGCGCCAGCCCTGGTAAGTGAG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCGTGACAAGGGTGGGTTaGGCAGCTGGGGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIVTRVG*AAGAQN
Trigger: GTTCTGGGCCCCAGCTGCCCAACCCACCCTTGTCAC...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp AGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCCAGGCCCCAGCTTCTaGGCGCAGCATGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RSRDSRHRWNPHGCHWNRPGPSF*AQHGPH
Trigger: ATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGG...GCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR TCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCATCAGGATGCCAGCAATaGCCCACAGCCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSSGCQQ*PTAPAV
Trigger: AACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGA...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERESRQR*RAGPRL
Trigger: CAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp AGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCAGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SILLLQGAGASASGKVNPESRQR*RAGPRL
Trigger: CAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTC...TGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGCGGGGCCTGATGCCCTaGGTGCTCAGGTACGATATA +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASRGLMP*VLRYDI
Trigger: TATATCGTACCTGAGCACTCAGGGCATCAGGCCCCG...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CAGTGGGAGGTGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QWEVGSSGVPCTLDPWAAASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...AGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCACCTCCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLISCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCCACAGCCCCAGCTGTTaGTGCTGCTGCAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TKSENSTITTMPAQSRSSHSPSC*CCCRLC
Trigger: GCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTG...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCCGAGCATCTTATTGCTaGAGGGGGCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCRASYC*RGQGRR
Trigger: CCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCG...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTACAGGAGCACCTaGCTCTCCTTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: WAALEFPAPWILGLLSLPGYRST*LSFLWL
Trigger: AAGCCAAAGAAAGGAGAGGCAGGTGCTCCTGTACCC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCCCCGGGCTCACTATGTaGCTGCTCCAGGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCPGLTM*LLQESL
Trigger: CAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGG...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCCCTGGGGACCAGCAGTaGGGTAGCCACACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGPGDQQ*GSHTLW
Trigger: CCAAAGGGTGTGGCTACCGCACTGCTGGTCCCCAGG...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCATGGAATCCACATGGCTaGCACTGGAATCGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPWNPHG*HWNRQS
Trigger: GCTCTGGCGATTCCAGTGGCAGCCATGTGGATTCCA...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCAGGGACATCCAGGCATaGCACGTATTGGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLRDIQA*HVLGRD
Trigger: ATCTCTGCCCAATACGTGGCATGCCTGGATGTCCCT...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSEEEEP*ARHATA
Trigger: GGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: AEYLPPVWREAHSLSQPLLLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...GAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGATCTTTGTTGGGGGCCTaGCTGGTCCCCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGSLLGA*LVPSSL
Trigger: CAAGGAGGAGGGGACCAGCCAGGCCCCCAACAAAGA...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCTCTTTGTTGGGGGCCTaGCTGGTCCCCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVSLLGA*LVPSSL
Trigger: CAAGGAGGAGGGGACCAGCCAGGCCCCCAACAAAGA...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGAAGTCGCCCACCTCATaGGGGATCTCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASKSPTS*GISCRR
Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGGGCGACTT...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR CCA 90 bp GAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCGGCCCGGAGCAGGATaGCAAAGTCGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: EEREQHHYHDARTEQKQLRPGAG*QSRPPH
Trigger: ATGAGGTGGGCGACTTTGCCATCCTGCTCCGGGCCG...CAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp ACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGTTGAGAGTTGCAGCTTaGCTGCGCTCCATCGGTCAA +
Preference number: 4 (lower is better)
Translates to: TRTSLLSGGRLILSRSHSLRVAA*LRSIGQ
Trigger: TTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAA...CGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAGAGGTAACCACAGCATaGCTGGGGACAGGCGCTACA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSEVTTA*LGTGAT
Trigger: TGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCACCCTGGATCCTTaGGCTGCTCTCACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCCTLDP*AALTPG
Trigger: CCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCAATGGTTGGGGATTATaGCTTCAGCACTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCNGWGL*LQHSAG
Trigger: TCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATT...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCGCCCCCACCTACCGCCAAGGGAAATGGTTaGGGATTATGGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RSTFLSADNVEPSPPPPTAKGNG*GLWLQH
Trigger: GTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC...GGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAAGGATCAGAGAACAGTaGCGGCCAGGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSRIREQ*RPGQQQ
Trigger: CTGCTGCTGTCCTGGCCGCCACTGTTCTCTGATCCT...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCAGGGAACAGTGTGAGGTaGGAAAGATCTCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPGNSVR*ERSRPA
Trigger: AGCTGGCCGAGATCTTTCCCACCTCACACTGTTCCC...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCAGCTGCAGGCTGCTaGGGTGAGGAGCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LFFQEVREHVHQGDVEKAAAAGC*GEELQP
Trigger: GGGCTGGAGCTCCTCACCCCAGCAGCCTGCAGCTGC...GGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGCCGTCTCCTTCCCTTaGGGGACTGGGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIAVSFP*GTGYRW
Trigger: CCATCTGTACCCAGTCCCCCAAGGGAAGGAGACGGC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCGCACTGTCTTGCCCCTaGCGTGTGGCCTCACTTACC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIALSCP*RVASLT
Trigger: GGTAAGTGAGGCCACACGCCAGGGGCAAGACAGTGC...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCTCAGGATGCCAGCAATaGCCCACAGCCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGISGCQQ*PTAPAV
Trigger: AACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGA...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGATCAGGATGCCAGCAATaGCCCACAGCCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGSGCQQ*PTAPAV
Trigger: AACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGA...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCCAGCCAGCCCGTGGGTaGAGTTATCGATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVQPARG*SYRWCW
Trigger: CCAACACCATCGATAACTTCACCCACGGGCTGGCTG...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCCAGCCAGCCCGTGGGTaGAGTTATCGATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIQPARG*SYRWCW
Trigger: CCAACACCATCGATAACTTCACCCACGGGCTGGCTG...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGCCGGAGCACATTCCTaGGCGCTGACAACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERAGAHS*ALTTWS
Trigger: GCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGTGGAGTGGGCCAGCTaGGTACCTGGGCGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRVEWAS*VPGRQP
Trigger: TGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCAC...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp GAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCAGGGATGAGAGCCTTAGATaGGGGCGCTGGCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: ENSTITTMPAQSRSSCCRDESLR*GRWQWR
Trigger: CCTCCATTGCCAGCGCCCTCATCTAAGGCTCTCATC...CCTGCAGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp CACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCCACGCCTAGCAGCTTaGCAGAGGCACCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: HEEREQHHYHDARTEQKQPRLAA*QRHPTR
Trigger: CCTTGTTGGGTGCCTCTGTCAAGCTGCTAGGCGTGG...CTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCAAAGTCGCCCACCTaGAGGGAGGTCCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PRRARTAPLPRCPHRAEAAKSPT*REVQRF
Trigger: GAACCTCTGGACCTCCCTTCAGGTGGGCGACTTTGC...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGAGGGACATCCAGGCATaGCACGTACGTGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KKQRLQTQVESTWLPLESRDIQA*HVRAAA
Trigger: CGCCGCCGCACGTACGTGGCATGCCTGGATGTCCCT...CGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCGAAGCTGAGCAGCTaGTTCAGGCGCCAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIAKLSS*FRRQAP
Trigger: TGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGC...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR GCA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGCACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRHQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTG...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KKQRLQTQVESTWLPLESHQGWR*TCRPRL
Trigger: AAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTG...CGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCACCATTACCACGATaGCCGCACAGAGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASAPLPR*PHRAEA
Trigger: TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGC...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCATCCGAGCATCTTATTaGTGCAGGGGGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIIRASY*CRGQGR
Trigger: ACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGAT...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 4 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGCGAGAACAGCAGCTGCTCTTCCTCGCTaGTTACTCCGGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GAGASASGKVNPRRARTAAALPR*LLREVK
Trigger: CTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGC...TGCTGTTCTCGCTCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCAAGAGCTGCTGGTGCTaGCAGGGCGTGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERKSCWC*QGVLAR
Trigger: CCTGGCCAACACGCCCTGGCAGCACCAGCAGCTCTT...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGGCTCACTATGTGCCTaGTCCAGGAGTCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRGSLCA*SRSPWP
Trigger: GGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCC...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGCTGCAGAGTAGGCTaGCTCTGGGCCAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRSCRVG*LWARGQ
Trigger: CTGGCCTCTGGCCCAGAGGCAGCCTACTCTGCAGCT...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCGCTACTCAGGGATCCTaGCCTAGGACTTCTAAAATG +
Preference number: 4 (lower is better)
Translates to: PPVWREAHSLSQPLALSAATQGS*PRTSKM
Trigger: CATTTTAGAAGTCCTAGGGCAGGATCCCTGAGTAGC...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCATCTTTGTTGGGGGCCTaGCTGGTCCCCTCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PRRARTAPLPRCPHRAEASLLGA*LVPSSL
Trigger: CAAGGAGGAGGGGACCAGCCAGGCCCCCAACAAAGA...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGAGCCACAGCCAGCCCGTaGGTGAAGTTATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGATASP*VKLSMV
Trigger: CACCATCGATAACTTCACCCACGGGCTGGCTGTGGC...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCAGGAAGTCGCCCACCTCATaGGGGATCTCATGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ENSTITTMPAQSRSSCCRKSPTS*GISCRR
Trigger: CCTCCTGCATGAGATCCCCCATGAGGTGGGCGACTT...CCTGCAGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGACCGTACCTACTCCCTTaGGGGACTGGGTACAGATGG +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGPYLLP*GTGYRW
Trigger: CCATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGG...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCCATCTCTAGGGGAATaGCAAGCAACGGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLIPSLGE*QATGRP
Trigger: GGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR TCA 90 bp AGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTTCAGGATGCCAGCAATaGCCCACAGCCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RARTAPLPRCPHRAEAAASGCQQ*PTAPAV
Trigger: AACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGA...AGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGTATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCGTACGATATACACACTaGGCCCCCTGCCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TKSENSTITTMPAQSRSSVRYTH*APCPSP
Trigger: TGGGGAAGGGCAGGGGGCTCAGTGTGTATATCGTAC...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCCTCTGCTGGGGCTCTTaGGAGCACACTCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCLCWGS*EHTQLS
Trigger: TGAGAGCTGAGTGTGCTCTCAAGAGCCCCAGCAGAG...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRSCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCAGGAGCGCTGTTGAGAGTTaGAGCTTGGCTGCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ENSTITTMPAQSRSSCCRSAVES*SLAALH
Trigger: ATGGAGCGCAGCCAAGCTGCAACTCTCAACAGCGCT...CCTGCAGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGCACCATTACCACGATaGCCGCACAGAGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIAPLPR*PHRAEA
Trigger: TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCATCCGAGCATCTTATTaGTGCAGGGGGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGIRASY*CRGQGR
Trigger: ACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGAT...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp TCACAGGCGCTGGGAAGGAAAGGATGGATAGAGTGCCCAGGGGAGCAGGCCCAGACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 4 (lower is better)
Translates to: SQALGRKGWIECPGEQAQTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...CTGGGCCTGCTCCCCTGGGCACTCTATCCATCCTTTCCTTCCCAGCGCCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGCTGCTCTTCCTCGCTaGTTACTCCGGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGAALPR*LLREVK
Trigger: CTTCACCTCCCGGAGTAAGCAGCGAGGAAGAGCAGC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGCTTGGGACCAGTGCTaGTCTTCCTCGCTGCTTACT +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIAWDQC*SSSLLT
Trigger: AGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCAGCTCTGGAGTTCCCTaGACCCTGGATCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGSSGVP*TLDPWA
Trigger: AGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCT...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GGTCCTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAACAGAGCAGAAGCAGCTaGTGCAGGGAGCGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GPLLPRGQGARSPRRCREQSRSS*CRERLW
Trigger: CCACAGGCGCTCCCTGCAGCAGCTGCTTCTGCTCTG...TTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp AGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCATCCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RPSQARAIGGGHLEWDLILLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...GATGAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGGGACTGGGTACAGATaGCGAAGCCAGCGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRGTGYR*RSQRPV
Trigger: TACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCC...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCTGCCTCTCCTTTCTTTaGCTTAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLCLSFL*LRSGEG
Trigger: TCCTTCCCCACTTCTAAGCCAAAGAAAGGAGAGGCA...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCTTTGGCAGCTGGAGGTaGCAAGAGCTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGFGSWR*QELLVL
Trigger: CAGCACCAGCAGCTCTTGCCACCTCCAGCTGCCAAA...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCCGGCAGGCTGCTGTTTaGCAGCTGGAGGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERRQAAV*QLEVAR
Trigger: TCTTGCCACCTCCAGCTGCCAAACAGCAGCCTGCCG...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGGQLST*ASAKGN
Trigger: ATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCGGGAGAACACCCAACTaGGTACCCAAGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIGRTPN*VPKALC
Trigger: ACACAGTGCCTTGGGTACCCAGTTGGGTGTTCTCCC...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCCTGGGAAGGAAAGGATaGATAGAGTGCCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVLGRKG*IECPGE
Trigger: CTCCCCTGGGCACTCTATCCATCCTTTCCTTCCCAG...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524928.1
3UTR CAA 72 bp CCAGCTGAGTACCTGGGCGTCAGCCAAGGGAAATGGTaGGGGATTATGGCTTCAGCACTCTGCCGGAGCACA +
Preference number: 4 (lower is better)
Translates to: PAEYLGVSQGKW*GIMASALCRST
Trigger: TGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCATATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR TCA 90 bp CTGTTGAGAGTTGCAGCTTGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGAACCAAATTTAGATaGGGAGGTCAGCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLRVAAWLRSIGQSRPGAGTKFR*GGQQRP
Trigger: AGGCCTTTGCTGACCTCCTCATCTAAATTTGGTTCC...TGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGAGCTGTTGCTGCTGCTaGAGGCTCTGCCCCTCACCA +
Preference number: 4 (lower is better)
Translates to: KKQRLQTQVESTWLPLESSCCCC*RLCPSP
Trigger: TGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCT...CGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp GAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCAGGTGGTCCCCTCCTCCTTaGTGTCCAGGAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: ENSTITTMPAQSRSSCCRWSPPP*CPGTSS
Trigger: AGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCA...CCTGCAGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVSWGIS*RRMAMV
Trigger: AACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCATCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGGTACAGGAGCACCTaGCTCTCCTTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVGYRST*LSFLWL
Trigger: AAGCCAAAGAAAGGAGAGGCAGGTGCTCCTGTACCC...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGGGCCAGGCCTGGCTGTGGAGTGGGCCAGCTGAGTACCTGGGCGTCAGCCAAGGAATCACAGCAAAGTTaGTATAAAACCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: RARPGCGVGQLSTWASAKESQQS*YKTIQT
Trigger: GGTCTGGATGGTTTTATAGCAACTTTGCTGTGATTC...CTTGGCTGACGCCCAGGTACTCAGCTGGCCCACTCCACAGCCAGGCCTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCTGGAATCCACATGGCTaGCACTGGAATCGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAWNPHG*HWNRQS
Trigger: GCTCTGGCGATTCCAGTGGCAGCCATGTGGATTCCA...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGACCGGGCCCATACAACTaGCAGGACGTTCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRPGPYN*QDVLFP
Trigger: AGGGAACAGAACGTCCTGGCAGTTGTATGGGCCCGG...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp CCTGAGGAAAGGGTCTTAGGAAGCGCCTCCCAGCTCACTACTAGGAGCTGGGGATTGAGAGTTGCAGCTTaGCTGCGCTCCATCGGTCAA +
Preference number: 4 (lower is better)
Translates to: PEERVLGSASQLTTRSWGLRVAA*LRSIGQ
Trigger: TTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAA...TCCCCAGCTCCTAGTAGTGAGCTGGGAGGCGCTTCCTAAGACCCTTTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCTTGAGAGTTGCAGCTTaGCTGCGCTCCATCGGTCAA +
Preference number: 4 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVLRVAA*LRSIGQ
Trigger: TTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAA...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAAATGGTTGGGGATTATaGCTTCAGCACTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ASALCRSTFLSADNVEPSNGWGL*LQHSAG
Trigger: TCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATT...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGAATGGTTGGGGATTATaGCTTCAGCACTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASNGWGL*LQHSAG
Trigger: TCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATT...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCCAAGGGAAATGGTTaGGGATTATGGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CGHRVNPSILLLQGAGASAKGNG*GLWLQH
Trigger: GTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp AGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCAGGCCAGCTGAGTACCTaGGCGTCAGCCAAGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SILLLQGAGASASGKVNPGQLST*ASAKGN
Trigger: ATTTCCCTTGGCTGACGCCCAGGTACTCAGCTGGCC...TGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp AGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCATACCTCCCTCCTGTCTaGCGGGAGGCTCATTCTCTC +
Preference number: 4 (lower is better)
Translates to: SILLLQGAGASASGKVNPYLPPV*REAHSL
Trigger: GAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTA...TGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533076.5
3UTR CAA 72 bp CACATATGCGGTCACAGAGTGAATCCGAGCATCTTATaGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HICGHRVNPSIL*LQGAGASASGK
Trigger: TTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGACCATCTCTAGGGGAATaGCAAGCAACGGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRPSLGE*QATGRP
Trigger: GGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGG...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGTCAGGATGCCAGCAATaGCCCACAGCCCCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KKQRLQTQVESTWLPLESSGCQQ*PTAPAV
Trigger: AACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGA...CGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR TCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGACAGTGGCCTCCATTaGGCGCGGCGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTDSGLH*ARRQQQ
Trigger: CTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR TCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCCAGCCAGCCCGTGGGTaGAGTTATCGATGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIQPARG*SYRWCW
Trigger: CCAACACCATCGATAACTTCACCCACGGGCTGGCTG...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR TCA 90 bp AGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGGTCTCTTAAGTCTCTaGCCCTCATCAGCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: RARTAPLPRCPHRAEAAAGLLSL*PSSASH
Trigger: ATGGGAGGCTGATGAGGGTCAGAGACTTAAGAGACC...AGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp GAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCTGGTCCCCTCCTCCTTaGTGTCCAGGAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: EAETPDTGGIHMAATGIAWSPPP*CPGTSS
Trigger: AGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCA...GGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp GAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGTGGTCCCCTCCTCCTTaGTGTCCAGGAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: EEREQHHYHDARTEQKQLWSPPP*CPGTSS
Trigger: AGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCA...CAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp AGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTTCATGGGGGATCTCATaGAGGAGGATGGCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RARTAPLPRCPHRAEAAASWGIS*RRMAMV
Trigger: AACCATGGCCATCCTCCTGCATGAGATCCCCCATGA...AGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCAGCGCTGTTGAGAGTTaGAGCTTGGCTGCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSSAVES*SLAALH
Trigger: ATGGAGCGCAGCCAAGCTGCAACTCTCAACAGCGCT...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGCACCATTACCACGATaGCCGCACAGAGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERAPLPR*PHRAEA
Trigger: TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCACTCGCCCTCTCTaGCTCTCACATATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LFFQEVREHVHQGDVEKAATRPL*LSHMRS
Trigger: TGACCGCATATGTGAGAGGCAGAGAGGGCGAGTGGC...GGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGCTTGGGACCAGTGCTaGTCTTCCTCGCTGCTTACT +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERAWDQC*SSSLLT
Trigger: AGTAAGCAGCGAGGAAGAGCAGCACTGGTCCCAAGC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRMASAL*RSTFLS
Trigger: GCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCAT...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR GCA 90 bp AGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCAGCCCCTCACCTTCTTaGTCACAAGGAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSRDSRHRWNPHGCHWNRSPSPS*SQGSWQ
Trigger: CTGCCAGCTTCCTTGTGAGCAAGAAGGTGAGGGGCT...GCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGTCAGGAGCCCGATCTaGAGGGAGGGGAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTVRSPI*REGSRG
Trigger: GCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGAC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCACAGCCAGCCCGTaGGTGAAGTTATCGATGGTG +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIATASP*VKLSMV
Trigger: CACCATCGATAACTTCACCCACGGGCTGGCTGTGGC...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp AAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCACAGGTGGAATCCACATaGCTGCCACTGGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: KQRLQTQVESTWLPLESPQVEST*LPLESP
Trigger: TGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTG...TGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAGACTCCAGACACAGGTaGAATCCACATGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRDSRHR*NPHGCH
Trigger: GTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTC...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGGGTGGGCACTGTGTTaGCCACTGGAAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRGWALC*PLEIQQ
Trigger: CTGCTGTATTTCCAGTGGCCAACACAGTGCCCACCC...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGTGCAGGGAGCGCCTGTaGGGAGGGAACGGCTCACGG +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTCRERL*GGNGSR
Trigger: CCGTGAGCCGTTCCCTCCCCACAGGCGCTCCCTGCA...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCCTGGGTTAGTTTCTTaGCAAAGAAAAGCTACTCAG +
Preference number: 4 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLPGLVS*QRKATQ
Trigger: CTGAGTAGCTTTTCTTTGCCAAGAAACTAACCCAGG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
3UTR CAA 72 bp TACTCTGCTCTGAGCTGGCTCTGGGTGGGCACTGTGTaGGCCACTGGAAATACAGCAGTGACTAAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: YSALSWLWVGTV*ATGNTAVTKGD
Trigger: GTCCCCTTTAGTCACTGCTGTATTTCCAGTGGCCAACACAGTGCCCACCCAGAGCCAGCTCAGAGCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR TCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCCCATCTCTAGGGGAATaGCAAGCAACGGGAAGACCC +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIPSLGE*QATGRP
Trigger: GGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGG...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR TCA 90 bp AGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCCCAGCTTGTCTTCTaGAGCTTTCTGTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: RARTAPLPRCPHRAEAAAAQLVF*SFLSIS
Trigger: TGAGATGGACAGAAAGCTTCAGAAGACAAGCTGGGC...AGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCAGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KQRLQTQVESTWLPLESPASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...TGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR GCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGGTCCCCTCCTCCTTaGTGTCCAGGAACATCTTCT +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSWSPPP*CPGTSS
Trigger: AGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCA...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGAGCCCGATCTTCTTaGTCACAAGGAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRGARSS*SQGSWQ
Trigger: CTGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCC...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR CCA 90 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCTTCTGAGCGCAGCATaGTCCCCATCTCTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KKQRLQTQVESTWLPLESLLSAA*SPSLGE
Trigger: TTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAG...CGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCTGCCTCTCCTTTCTTTaGCTTAGAAGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGICLSFL*LRSGEG
Trigger: TCCTTCCCCACTTCTAAGCCAAAGAAAGGAGAGGCA...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGCAGGTGGAATCCACATaGCTGCCACTGGAATCGCCA +
Preference number: 4 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRQVEST*LPLESP
Trigger: TGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTG...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CCA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGACTCCAGACACAGGTaGAATCCACATGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QEAETPDTGGIHMAATGIDSRHR*NPHGCH
Trigger: GTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTC...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAAGGCATGCCACGTATTaGGCAGAGATAGCGACTGAG +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRRHATY*AEIATE
Trigger: CTCAGTCGCTATCTCTGCCCAATACGTGGCATGCCT...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR TCA 90 bp CCACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCATATGCGGTCACAGAGTaGATCCGAGCATCTTATTGC +
Preference number: 4 (lower is better)
Translates to: PRRARTAPLPRCPHRAEAYAVTE*IRASYC
Trigger: GCAATAAGATGCTCGGATTCACTCTGTGACCGCATA...TGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp TTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGATCTGCCTCTCACATATaGGGTCACAGAGTGAATCCG +
Preference number: 4 (lower is better)
Translates to: LLLQGAGASASGKVNPRRSASHI*GHRVNP
Trigger: CGGATTCACTCTGTGACCGCATATGTGAGAGGCAGA...TCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCACCTCTGGCCACATGTaGACACCACATACATCCACA +
Preference number: 4 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSTSGHM*TPHTST
Trigger: TGTGGATGTATGTGGTGTGCACATGTGGCCAGAGGT...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGCAGGGCAAGGCCTCTaGTTGGGACCAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTAGQGL*LGPVLL
Trigger: GAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCCTGC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp AAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCCTAGGACTTCTAAAATaGCCCCCTCCCTGTATGCAA +
Preference number: 4 (lower is better)
Translates to: KSENSTITTMPAQSRSSCLGLLK*PPPCMQ
Trigger: TTGCATACAGGGAGGGGGGCATTTTAGAAGTCCTAG...GCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGCTGCCAGGGCGTGTTaGCCAGGAATGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTAARAC*PGMSSQ
Trigger: CTGGGAGCTCATTCCTGGCCAACACGCCCTGGCAGC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGCCAAGGGAAATGGTTaGGGATTATGGCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERAKGNG*GLWLQH
Trigger: GTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCCCAAAATGGAATCCCTaGGTTAGTTTCTTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQSESEHLIAAGGRGVGIPKWNP*VSFLAK
Trigger: CTTTGCCAAGAAACTAACCCAGGGATTCCATTTTGG...GATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGAGCTCTGGAGTTCCCTaGACCCTGGATCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTSSGVP*TLDPWA
Trigger: AGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCT...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CCA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGTTCATGTTGCACTGTTaGCCTTCCTTAGACCGCCAA +
Preference number: 4 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRFMLHC*PSLDRQ
Trigger: TTGGCGGTCTAAGGAAGGCCAACAGTGCAACATGAA...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGGAGCCCGATCTTCTTaGTCACAAGGAAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTGARSS*SQGSWQ
Trigger: CTGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGATGGCTTCAGCACTCTaGCGGAGCACATTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTMASAL*RSTFLS
Trigger: GCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCAT...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR GCA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGAATCACAGCAAAGTTaGTATAAAACCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGESQQS*YKTIQT
Trigger: GGTCTGGATGGTTTTATAGCAACTTTGCTGTGATTC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGGCTTCGGGCAGCAGATaGAGAAACACATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTASGSR*RNTLPK
Trigger: CTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGC...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAGAATCACAGCAAAGTTaGTATAAAACCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: ILLLQGAGASASGKVNPRESQQS*YKTIQT
Trigger: GGTCTGGATGGTTTTATAGCAACTTTGCTGTGATTC...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CCA 90 bp AGTTGCTATAAAACCATCCAGACCTCTCGATGGCCACTTCTGAAAACATCCACGTTGAGAGTTGCAGCTTaGCTGCGCTCCATCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SCYKTIQTSRWPLLKTSTLRVAA*LRSIGQ
Trigger: TTGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAA...CGTGGATGTTTTCAGAAGTGGCCATCGAGAGGTCTGGATGGTTTTATAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR GCA 90 bp CTCTTCTTCCAAGAGGTCAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGAATCACAGCAAAGTTaGTATAAAACCATCCAGACC +
Preference number: 4 (lower is better)
Translates to: LFFQEVREHVHQGDVEKAESQQS*YKTIQT
Trigger: GGTCTGGATGGTTTTATAGCAACTTTGCTGTGATTC...GGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTGACCTCTTGGAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS TCA 90 bp CGAGGCCGGGCTCTGCAGCCGGCTGGGCCAGACAGTGGCCTCCATTaGGCGCGGCGGCAGCAGCAGTGGGGTCTTTGTTGGGGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: RGRALQPAGPDSGLH*ARRQQQWGLCWGPG
Trigger: GCCAGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000529740.1
ENST00000533076.5
CDS GCA 90 bp GCCGCTGACTTTGATGCTCCGGACCACGGCACCGAGGCCGGGCTCTaGAGCCGGCTGGGCCAGACAGTGGCCTCCATTGAGCGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AADFDAPDHGTEAGL*SRLGQTVASIERGG
Trigger: GCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCGGTGCCGTGGTCCGGAGCATCAAAGTCAGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000529740.1
ENST00000533076.5
CDS CCA 90 bp TTGATGCTCCGGACCACGGCACCGAGGCCGGGCTCTGCAGCCGGCTaGGCCAGACAGTGGCCTCCATTGAGCGCGGCGGCAGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LMLRTTAPRPGSAAG*ARQWPPLSAAAAAV
Trigger: CACTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCGGTGCCGTGGTCCGGAGCATCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000529740.1
ENST00000533076.5
CDS-3UTR CAA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLRQWPP*SAAAAA
Trigger: TGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCT...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp GAGGTAACCACAGCATGGCTGGGGACAGGCGCTACACTGGGCCCCGGACCCAGCGCAGTGGGGTCTTTGTaGGGGGCCTGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: EVTTAWLGTGATLGPGPSAVGSL*GAWLVP
Trigger: GGGGACCAGCCAGGCCCCCAACAAAGACCCCACTGC...GCTGGGTCCGGGGCCCAGTGTAGCGCCTGTCCCCAGCCATGCTGTGGTTACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGCAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS TCA 90 bp CGCCATGCCACAGCCAGGGCAGGGACATCCAGGCATGCCACGTACTaGAAAACACAAAAGGCCACCGTGCGGCGGCGGCGGCGGCGATCC +
Preference number: 5 (lower is better)
Translates to: RHATARAGTSRHATY*KTQKATVRRRRRRS
Trigger: GGATCGCCGCCGCCGCCGCCGCACGGTGGCCTTTTGTGTTTTTCAGTACGTGGCATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS-3UTR CAA 90 bp TTTGGCTGGTGCCCCTCTGCTGATGCCACCCGCCACAACCACCCGCCACGCCCGGACTCGCTTTCCTTGTaGTCCAGGCGACAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: FGWCPSADATRHNHPPRPDSLSL*SRRQAV
Trigger: GACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTC...CGGGCGTGGCGGGTGGTTGTGGCGGGTGGCATCAGCAGAGGGGCACCAGCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGGCAGTGGGGTCTTTGTaGGGGGCCTGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLAVGSL*GAWLVP
Trigger: GGGGACCAGCCAGGCCCCCAACAAAGACCCCACTGC...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp CCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PPVWREAHSLSQPLALSARQWPP*SAAAAA
Trigger: TGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCT...GGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp AGAGGTTCACCCTGCGCCCCAGCGGGGCCTGATGCCCTGAGTGCTCAGGTACGAAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: RGSPCAPAGPDALSAQVRRQWPP*SAAAAA
Trigger: TGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCT...TCGTACCTGAGCACTCAGGGCATCAGGCCCCGCTGGGGCGCAGGGTGAACCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS GCA 90 bp AGGAAGGTCAGGATGCCAGCAATGACCCACAGCCCCAGCTGTTGCTaGTGCTGCAGGCTCTGCCCCTCACCACCAGGGCTGGCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: RKVRMPAMTHSPSCC*CCRLCPSPPGLALH
Trigger: GTGCAGCGCCAGCCCTGGTGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGACCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000531419.5
ENST00000531865.5
ENST00000533076.5
CDS CCA 90 bp CCTTTCCAAGAGCTCCAGGGCAAGGGCAGTGAGGAAGAGGAGCCTTaGGCCCGCCATGCCACAGCCAGGGCAGGGACATCCAGGCATGCC +
Preference number: 5 (lower is better)
Translates to: PFQELQGKGSEEEEP*ARHATARAGTSRHA
Trigger: GGCATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTCACTGCCCTTGCCCTGGAGCTCTTGGAAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000527091.1
ENST00000531419.5
ENST00000531865.5
ENST00000531974.5
ENST00000533076.5
CDS CCA 90 bp CCTGGCACTGTCTTGCCCCTGGCGTGTGGCCTCACTTACCAGGGCTaGCGCTGCACGTGTAGGCCCAGGCTTCGGGCAGCAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGTVLPLACGLTYQG*RCTCRPRLRAADAE
Trigger: TTCTGCATCTGCTGCCCGAAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTAAGTGAGGCCACACGCCAGGGGCAAGACAGTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CAA 90 bp GGGCAGGGCTGCCCGGGCTCACTATGTGCCTGCTCCAGGAGTCCCTGGCCCCTGAGGAGCCCGATCTTCTaGCTCACAAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GQGCPGSLCACSRSPWPLRSPIF*LTRKLA
Trigger: TGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCCT...CAGGGGCCAGGGACTCCTGGAGCAGGCACATAGTGAGCCCGGGCAGCCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354884.8
ENST00000362021.9
CDS CCA 90 bp CAAAGTCGCCCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATaGTTGTCAGGAGCCCGATCTGCAGGGAGGGGAGCCGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: QSRPPHGGSHAGGWP*LSGARSAGRGAVAA
Trigger: CGCAGCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGGGCGACTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528979.1
CDS-3UTR CAA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGCAAGGCCTCTGCTaGGGACCAGTGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: WAALEFPAPWILGLLSLPGQGLC*GPVLLF
Trigger: GAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCC...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAGCCACGCCTAGCAGCTaGACAGAGGCACCCAACAAG +
Preference number: 5 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPATPSS*TEAPNK
Trigger: CTTGTTGGGTGCCTCTGTCAAGCTGCTAGGCGTGGC...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCACTCCTGGCACTGTCTaGCCCCTGGCGTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLTPGTV*PLACGL
Trigger: GAGGCCACACGCCAGGGGCAAGACAGTGCCAGGAGT...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS TCA 90 bp CAGGGAGCACGTTCACCAAGGCGATGTAGAGAAAGCCGCCAGAGGTaGAGGGCAGGACCCAGGCTGCCGTCTCCTTCCCTTGGGGGACTG +
Preference number: 5 (lower is better)
Translates to: QGARSPRRCRESRQR*RAGPRLPSPSLGGL
Trigger: CAGTCCCCCAAGGGAAGGAGACGGCAGCCTGGGTCCTGCCCTTCACCTCTGGCGGCTTTCTCTACATCGCCTTGGTGAACGTGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTTCT +
Preference number: 5 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCGGWPW*SGARSS
Trigger: AGAAGATCGGGCTCCTGACAACCATGGCCATCCTCC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR CAA 90 bp AGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTTCT +
Preference number: 5 (lower is better)
Translates to: SSLHPGSLGCSHSRGPSRGGWPW*SGARSS
Trigger: AGAAGATCGGGCTCCTGACAACCATGGCCATCCTCC...CCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354884.8
ENST00000362021.9
CDS-3UTR CAA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCGTTGAGAGTTGCAGCTaGGCTGCGCTCCATCGGTCA +
Preference number: 5 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCVESCS*AALHRS
Trigger: TGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAAC...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp TGGCTGCGCTCCATCGGTCAAAGCCGGCCCGGAGCAGGATGGCAAAGTCGCCCAGTTGAGAGTTGCAGCTaGGCTGCGCTCCATCGGTCA +
Preference number: 5 (lower is better)
Translates to: WLRSIGQSRPGAGWQSRPVESCS*AALHRS
Trigger: TGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAAC...TGGGCGACTTTGCCATCCTGCTCCGGGCCGGCTTTGACCGATGGAGCGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCAGGGCAAGGCCTCTGCTaGGGACCAGTGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPGQGLC*GPVLLF
Trigger: GAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCC...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp TGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGCTGCACCCTGGATCCTaGGGCTGCTCTCACTCCCGG +
Preference number: 5 (lower is better)
Translates to: CGHRVNPSILLLQGAGASLHPGS*GCSHSR
Trigger: CCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAG...CGACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp CTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCCTCTGCTGGGGCTCTaGAGAGCACACTCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LLSGGRLILSRSHSPSLPPLLGL*RAHSAL
Trigger: GAGAGCTGAGTGTGCTCTCAAGAGCCCCAGCAGAGG...AGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS GCA 90 bp ACTGTCTTGCCCCTGGCGTGTGGCCTCACTTACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTTCGGGCAGCAGATGCAGAAACACAT +
Preference number: 5 (lower is better)
Translates to: TVLPLACGLTYQGWR*TCRPRLRAADAETH
Trigger: ATGTGTTTCTGCATCTGCTGCCCGAAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTAAGTGAGGCCACACGCCAGGGGCAAGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CAA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCGACTCGCTTTCCTTGTaGTCCAGGCGACAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLDSLSL*SRRQAV
Trigger: GACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTC...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CAA 90 bp GCCAGGCCAAGCCAAGCCAGGGCCATAGGAGGGGGCCATTTGGAATGGGATCTCCAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: ARPSQARAIGGGHLEWDLQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...GAGATCCCATTCCAAATGGCCCCCTCCTATGGCCCTGGCTTGGCTTGGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS-3UTR CAA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCTGGTCCCCTCCTCCTaGCTGTCCAGGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLLVPSS*LSRNIF
Trigger: GAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAG...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGCAGTGGGGTCTTTGTaGGGGGCCTGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGAVGSL*GAWLVP
Trigger: GGGGACCAGCCAGGCCCCCAACAAAGACCCCACTGC...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp GAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCTGCAGGAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ENSTITTMPAQSRSSCCRRQWPP*SAAAAA
Trigger: TGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCT...CCTGCAGCAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp TCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCCTCGTTGAGAGTTGCAGCTaGGCTGCGCTCCATCGGTCA +
Preference number: 5 (lower is better)
Translates to: SCLAGGSFSLAATRPLCLVESCS*AALHRS
Trigger: TGACCGATGGAGCGCAGCCAAGCTGCAACTCTCAAC...GAGGCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGGTCTCCTCTACTCCCTaGGGGGACTGGGTACAGATG +
Preference number: 5 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLVSSTP*GDWVQM
Trigger: CATCTGTACCCAGTCCCCCAAGGGAGTAGAGGAGAC...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS-3UTR CAA 90 bp CCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGCAAGCCCCTCACCTTCTaGCTCACAAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: PSCLAGGSFSLAATRPLCKPLTF*LTRKLA
Trigger: TGCCAGCTTCCTTGTGAGCAAGAAGGTGAGGGGCTT...GCAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp GGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGCGAGAACAGCAGCTGCGGGGTCTGTGTaGAGGGCTGAGCACCCCACT +
Preference number: 5 (lower is better)
Translates to: GAGASASGKVNPRRARTAAAGSV*RAEHPT
Trigger: AGTGGGGTGCTCAGCCCTCAACACAGACCCCGCAGC...TGCTGTTCTCGCTCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp CTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCTGGGTGGGCACTGTGTaGGCCACTGGAAATACAGCA +
Preference number: 5 (lower is better)
Translates to: LWSSLHPGSLGCSHSRGPWVGTV*ATGNTA
Trigger: TGCTGTATTTCCAGTGGCCAACACAGTGCCCACCCA...GGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: ASALCRSTFLSADNVEPSQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp GGAGTGGGCCAGCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCTGGTCCCCTCCTCCTaGCTGTCCAGGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: GVGQLSTSLLSGGRLILSLVPSS*LSRNIF
Trigger: GAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAG...AGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGCTGGCCCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAGCAGTGGGGTCTTTGTaGGGGGCCTGGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: ILLLQGAGASASGKVNPRAVGSL*GAWLVP
Trigger: GGGGACCAGCCAGGCCCCCAACAAAGACCCCACTGC...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp ATCCACACGCACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACACCCAACTACTCCCTaGGGGGACTGGGTACAGATG +
Preference number: 5 (lower is better)
Translates to: IHTHLPPVWREAHSLSQPHPTTP*GDWVQM
Trigger: CATCTGTACCCAGTCCCCCAAGGGAGTAGTTGGGTG...TGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTGCGTGTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS-3UTR CAA 90 bp ACGAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCCTGCACCCTGGATCCTaGGGCTGCTCTCACTCCCGG +
Preference number: 5 (lower is better)
Translates to: TKSENSTITTMPAQSRSSLHPGS*GCSHSR
Trigger: CCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAG...GCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp TGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGGGGTCCCAGCAGGGCAAGGCAGCCAAGGGAAATGGTaGGGGATTATGGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: CTLDPWAALTPGVPAGQGSQGKW*GIMASA
Trigger: TGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCT...GCCTTGCCCTGCTGGGACCCCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCACCCGTACCTACTCCCTaGGGGGACTGGGTACAGATG +
Preference number: 5 (lower is better)
Translates to: ASALCRSTFLSADNVEPSPVPTP*GDWVQM
Trigger: CATCTGTACCCAGTCCCCCAAGGGAGTAGGTACGGG...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS GCA 90 bp GCTGGGGCTCTTGAGAGCACACTCAGCTCTCAGGGCTGCCTCTGGTaGCTGTCCCACTTCATGTTGCACTGTTGGCCTTCCTTAGACCGC +
Preference number: 5 (lower is better)
Translates to: AGALESTLSSQGCLW*LSHFMLHCWPSLDR
Trigger: GCGGTCTAAGGAAGGCCAACAGTGCAACATGAAGTGGGACAGGCACCAGAGGCAGCCCTGAGAGCTGAGTGTGCTCTCAAGAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp ATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGACTCGCTTTCCTTGTaGTCCAGGCGACAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: MRSQSESEHLIAAGGRGVDSLSL*SRRQAV
Trigger: GACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTC...GACGCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp GTCTCCTCTGCAGCGGGAGAACACCCAACTGGGTACCCAAGGCACTGTGTGTGCCTGGTCCCCTCCTCCTaGCTGTCCAGGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: VSSAAGEHPTGYPRHCVCLVPSS*LSRNIF
Trigger: GAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAG...GCACACACAGTGCCTTGGGTACCCAGTTGGGTGTTCTCCCGCTGCAGAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCCTGCACCCTGGATCCTaGGGCTGCTCTCACTCCCGG +
Preference number: 5 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERLHPGS*GCSHSR
Trigger: CCGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAG...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp GGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGAAGAGCGAGAACAGCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTGCA +
Preference number: 5 (lower is better)
Translates to: GAGASASGKVNPRRARTAGGWPW*SGARSA
Trigger: TGCAGATCGGGCTCCTGACAACCATGGCCATCCTCC...TGCTGTTCTCGCTCTTCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS-3UTR CAA 90 bp GGGCCAGCTGAGTACCTCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCTTCATGTTGCACTGTaGGCCTTCCTTAGACCGCCA +
Preference number: 5 (lower is better)
Translates to: GPAEYLPPVWREAHSLSQLHVAL*AFLRPP
Trigger: TGGCGGTCTAAGGAAGGCCAACAGTGCAACATGAAG...CTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGAGGTACTCAGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CCA 90 bp TCTCAGGGCTGCCTCTGGTGCCTGTCCCACTTCATGTTGCACTGTTaGCCTTCCTTAGACCGCCAACTTCTCCCTGGTGGCCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: SQGCLWCLSHFMLHC*PSLDRQLLPGGPAC
Trigger: ACAAGCTGGGCCACCAGGGAGAAGTTGGCGGTCTAAGGAAGGCCAACAGTGCAACATGAAGTGGGACAGGCACCAGAGGCAGCCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp GAAGAGCGAGAACAGCACCATTACCACGATGCCCGCACAGAGCAGAAGCAGCTGCAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: EEREQHHYHDARTEQKQLQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...CAGCTGCTTCTGCTCTGTGCGGGCATCGTGGTAATGGTGCTGTTCTCGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524928.1
ENST00000533076.5
CDS-3UTR CAA 90 bp GCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCTGACAACGTGGAGCCCTCAAGGAGCCCGATCTTCTaGCTCACAAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASALCRSTFLSADNVEPSRSPIF*LTRKLA
Trigger: TGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCCT...TGAGGGCTCCACGTTGTCAGCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354884.8
ENST00000362021.9
CDS-3UTR CAA 90 bp GAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCTGAGCGCGGGCAAGGCCTCTGCTaGGGACCAGTGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: EMVGDYGFSTLPEHIPERGQGLC*GPVLLF
Trigger: GAAGAGCAGCACTGGTCCCAAGCAGAGGCCTTGCCC...GCGCTCAGGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp TGGGCAGCTCTGGAGTTCCCTGCACCCTGGATCCTTGGGCTGCTCTCACTCCCGAGCCAAGGGAAATGGTaGGGGATTATGGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: WAALEFPAPWILGLLSLPSQGKW*GIMASA
Trigger: TGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCT...CGGGAGTGAGAGCAGCCCAAGGATCCAGGGTGCAGGGAACTCCAGAGCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp TCCCTCCTGTCTGGCGGGAGGCTCATTCTCTCTCGCAGCCACTCGCCCTCTCTGAGCCAAGGGAAATGGTaGGGGATTATGGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SLLSGGRLILSRSHSPSLSQGKW*GIMASA
Trigger: TGCTGAAGCCATAATCCCCAACCATTTCCCTTGGCT...CAGAGAGGGCGAGTGGCTGCGAGAGAGAATGAGCCTCCCGCCAGACAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp CATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGGGCTGCCGTCTCCTTCCCTaGGGGGACTGGGTACAGATG +
Preference number: 5 (lower is better)
Translates to: HMRSQSESEHLIAAGGRGCRLLP*GDWVQM
Trigger: CATCTGTACCCAGTCCCCCAAGGGAAGGAGACGGCA...GCCCCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS TCA 90 bp GAGGAAGAAGCATCTAGGAGCAGGCAGGGGCCACGCCTAGCAGCTTaGCAGAGGCACCCAACAAGGAGTACTGGGAACAGGAACAGACCA +
Preference number: 5 (lower is better)
Translates to: EEEASRSRQGPRLAA*QRHPTRSTGNRNRP
Trigger: TGGTCTGTTCCTGTTCCCAGTACTCCTTGTTGGGTGCCTCTGTCAAGCTGCTAGGCGTGGCCCCTGCCTGCTCCTAGATGCTTCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS CCA 90 bp TCTGCTGGGGCTCTTGAGAGCACACTCAGCTCTCAGGGCTGCCTCTaGTGCCTGTCCCACTTCATGTTGCACTGTTGGCCTTCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: SAGALESTLSSQGCL*CLSHFMLHCWPSLD
Trigger: GTCTAAGGAAGGCCAACAGTGCAACATGAAGTGGGACAGGCACCAGAGGCAGCCCTGAGAGCTGAGTGTGCTCTCAAGAGCCCCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp GCCAAGGGAAATGGTTGGGGATTATGGCTTCAGCACTCTGCCGGAGCACATTCCGACTCGCTTTCCTTGTaGTCCAGGCGACAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: AKGNGWGLWLQHSAGAHSDSLSL*SRRQAV
Trigger: GACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTC...GGAATGTGCTCCGGCAGAGTGCTGAAGCCATAATCCCCAACCATTTCCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
CDS-3UTR CAA 90 bp AGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGCCAGGACTCGCTTTCCTaGTTGTCCAGGCGACAGGCC +
Preference number: 5 (lower is better)
Translates to: RSRDSRHRWNPHGCHWNRQDSLS*LSRRQA
Trigger: GGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTG...GCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CAA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCGACTCGCTTTCCTTGTaGTCCAGGCGACAGGCCGTC +
Preference number: 5 (lower is better)
Translates to: QEAETPDTGGIHMAATGIDSLSL*SRRQAV
Trigger: GACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTC...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CAA 90 bp AGCATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTTCT +
Preference number: 5 (lower is better)
Translates to: SILLLQGAGASASGKVNPGGWPW*SGARSS
Trigger: AGAAGATCGGGCTCCTGACAACCATGGCCATCCTCC...TGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCCTGGTCCCCTCCTCCTaGCTGTCCAGGAACATCTTC +
Preference number: 5 (lower is better)
Translates to: QEAETPDTGGIHMAATGILVPSS*LSRNIF
Trigger: GAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAG...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS-3UTR CAA 90 bp TCACATATGCGGTCACAGAGTGAATCCGAGCATCTTATTGCTGCAGGGGGCAGGAGGAGCCCGATCTTCTaGCTCACAAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SHMRSQSESEHLIAAGGRRSPIF*LTRKLA
Trigger: TGCCAGCTTCCTTGTGAGCAAGAAGATCGGGCTCCT...CCTGCCCCCTGCAGCAATAAGATGCTCGGATTCACTCTGTGACCGCATATGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000533076.5
CDS-3UTR CAA 90 bp CAAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTGCCACTGGAATCAAGCCCCTCACCTTCTaGCTCACAAGGAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: QEAETPDTGGIHMAATGIKPLTF*LTRKLA
Trigger: TGCCAGCTTCCTTGTGAGCAAGAAGGTGAGGGGCTT...GATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531419.5
CDS TCA 90 bp ACCCCACCGGGCCCATACAACTGCCAGGACGTTCTGTTCCCTCCCTaGGTTCCAAAATGGAATCCCTGGGTTAGTTTCTTGGCAAAGAAA +
Preference number: 5 (lower is better)
Translates to: TPPGPYNCQDVLFPP*VPKWNPWVSFLAKK
Trigger: TTTCTTTGCCAAGAAACTAACCCAGGGATTCCATTTTGGAACTCAGGGAGGGAACAGAACGTCCTGGCAGTTGTATGGGCCCGGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS-3UTR CAA 90 bp ATCTTATTGCTGCAGGGGGCAGGGGCGTCGGCATCAGGGAAAGTTAATCCACGACCCTGGGTTAGTTTCTaGGCAAAGAAAAGCTACTCA +
Preference number: 5 (lower is better)
Translates to: ILLLQGAGASASGKVNPRPWVSF*AKKSYS
Trigger: TGAGTAGCTTTTCTTTGCCAAGAAACTAACCCAGGG...TCGTGGATTAACTTTCCCTGATGCCGACGCCCCTGCCCCCTGCAGCAATAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CCA 90 bp TGTTCCCTCCCTGAGTTCCAAAATGGAATCCCTGGGTTAGTTTCTTaGCAAAGAAAAGCTACTCAGGGATCCTGCCCTAGGACTTCTAAA +
Preference number: 5 (lower is better)
Translates to: CSLPEFQNGIPGLVS*QRKATQGSCPRTSK
Trigger: TTTAGAAGTCCTAGGGCAGGATCCCTGAGTAGCTTTTCTTTGCCAAGAAACTAACCCAGGGATTCCATTTTGGAACTCAGGGAGGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS GCA 72 bp CAGCCAGGGCAGGGACATCCAGGCATGCCACGTACGTaGGGCGGCGGCGGCGGCGATCCGGGCGGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: QPGQGHPGMPRT*GGGGGDPGGPS
Trigger: GCTGGGGCCGCCCGGATCGCCGCCGCCGCCGCCGCACGTACGTGGCATGCCTGGATGTCCCTGCCCTGGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000362021.9
ENST00000531419.5
ENST00000531974.5
CDS CAA 90 bp CCGAGGCCGGGCTCTGCAGCCGGCTGGGCCAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCAGTGGGGTCTTTGTTGGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PRPGSAAGWARQWPP*SAAAAAVGSLLGAW
Trigger: CCAGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000529740.1
ENST00000533076.5
CDS GCA 72 bp CCCCTGGCGTGTGGCCTCACTTACCAGGGCTGGCGCTaGACGTGTAGGCCCAGGCTTCGGGCAGCAGATGCA +
Preference number: 6 (lower is better)
Translates to: PLACGLTYQGWR*TCRPRLRAADA
Trigger: TGCATCTGCTGCCCGAAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTAAGTGAGGCCACACGCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS CCA 72 bp CAGGACCCAGGCTGCCGTCTCCTTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCAGCGCCCAGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: QDPGCRLLPLGD*VQMAKPAPSRP
Trigger: GGGCCTACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAAGGAGACGGCAGCCTGGGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CCA 72 bp GTCTTGCCCCTGGCGTGTGGCCTCACTTACCAGGGCTaGCGCTGCACGTGTAGGCCCAGGCTTCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: VLPLACGLTYQG*RCTCRPRLRAA
Trigger: TGCTGCCCGAAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTAAGTGAGGCCACACGCCAGGGGCAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531974.5
CDS CAA 72 bp GGCTCTGCAGCCGGCTGGGCCAGACAGTGGCCTCCATaGAGCGCGGCGGCAGCAGCAGTGGGGTCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: GSAAGWARQWPP*SAAAAAVGSLL
Trigger: CAACAAAGACCCCACTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000524928.1
ENST00000526614.5
ENST00000529740.1
ENST00000533076.5
CDS CAA 90 bp AGTCGCCCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTGCAGGGAGGGGAGCCGTGGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: SRPPHGGSHAGGWPW*SGARSAGRGAVAAG
Trigger: CCCCGCAGCCACGGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGGGCGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528979.1
CDS CCA 72 bp GCAGCGGGAGAACACCCAACTACTCCCTTGGGGGACTaGGTACAGATGGCGAAGCCAGCGCCCAGTAGGCCC +
Preference number: 6 (lower is better)
Translates to: AAGEHPTTPLGD*VQMAKPAPSRP
Trigger: GGGCCTACTGGGCGCTGGCTTCGCCATCTGTACCCAGTCCCCCAAGGGAGTAGTTGGGTGTTCTCCCGCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS TCA 72 bp ACAGCCAGGGCAGGGACATCCAGGCATGCCACGTACTaGAAAACACAAAAGGCCACCGTGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TARAGTSRHATY*KTQKATVRRRR
Trigger: CCGCCGCCGCCGCACGGTGGCCTTTTGTGTTTTTCAGTACGTGGCATGCCTGGATGTCCCTGCCCTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354884.8
CDS GCA 72 bp AGAGGTGAAGGGCAGGACCCAGGCTGCCGTCTCCTCTaGAGCGGGAGAACACCCAACTACTCCCTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: RGEGQDPGCRLL*SGRTPNYSLGG
Trigger: TCCCCCAAGGGAGTAGTTGGGTGTTCTCCCGCTGCAGAGGAGACGGCAGCCTGGGTCCTGCCCTTCACCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362021.9
CDS CCA 72 bp CCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATaGTTGTCAGGAGCCCGATCTGCAGGGAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PPHGGSHAGGWP*LSGARSAGRGA
Trigger: GGCTCCCCTCCCTGCAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528979.1
CDS GCA 72 bp AGCAGAGACTCCAGACACAGGTGGAATCCACATGGCTaGCACTGGAATCGCCAGAGCCCCACTGGCCCCAAG +
Preference number: 6 (lower is better)
Translates to: SRDSRHRWNPHG*HWNRQSPTGPK
Trigger: CTTGGGGCCAGTGGGGCTCTGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524928.1
ENST00000529740.1
ENST00000531419.5
CDS GCA 72 bp GCCACGTACAGAGCGTCTGAGCATCCAAATGCTGGGTaGACAGCAATGGGGCCCTGTGTCTCCACACCCTAC +
Preference number: 6 (lower is better)
Translates to: ATYRASEHPNAG*TAMGPCVSTPY
Trigger: GTAGGGTGTGGAGACACAGGGCCCCATTGCTGTGCACCCAGCATTTGGATGCTCAGACGCTCTGTACGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527091.1
CDS CCA 72 bp AAGAAGCAGAGACTCCAGACACAGGTGGAATCCACATaGCTGCCACTGGAATCGCCAGAGCCCCACTGGCCC +
Preference number: 6 (lower is better)
Translates to: KKQRLQTQVEST*LPLESPEPHWP
Trigger: GGGCCAGTGGGGCTCTGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524928.1
ENST00000529740.1
ENST00000531419.5
CDS CAA 90 bp CTGTTGGCCTTCCTTAGACCGCCAACTTCTCCCTGGTGGCCCAGCTaGTCTTCTGAAGCTTTCTGTCCATCTCACCCCACCGGGCCCATA +
Preference number: 6 (lower is better)
Translates to: LLAFLRPPTSPWWPS*SSEAFCPSHPTGPI
Trigger: TATGGGCCCGGTGGGGTGAGATGGACAGAAAGCTTCAGAAGACAAGCTGGGCCACCAGGGAGAAGTTGGCGGTCTAAGGAAGGCCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CCA 72 bp TGCCTCTGGTGCCTGTCCCACTTCATGTTGCACTGTTaGCCTTCCTTAGACCGCCAACTTCTCCCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: CLWCLSHFMLHC*PSLDRQLLPGG
Trigger: GCCACCAGGGAGAAGTTGGCGGTCTAAGGAAGGCCAACAGTGCAACATGAAGTGGGACAGGCACCAGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS TCA 72 bp CATTTACTCTGTCACTTTCCCCTCTGCTGGGGCTCTTaGGAGCACACTCAGCTCTCAGGGCTGCCTCTGGTG +
Preference number: 6 (lower is better)
Translates to: HLLCHFPLCWGS*EHTQLSGLPLV
Trigger: CACCAGAGGCAGCCCTGAGAGCTGAGTGTGCTCTCAAGAGCCCCAGCAGAGGGGAAAGTGACAGAGTAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CCA 72 bp CCACCTCATGGGGGATCTCATGCAGGAGGATGGCCATaGTTGTCAGGAGCCCGATCTTCTTGCTCACAAGGA +
Preference number: 6 (lower is better)
Translates to: PPHGGSHAGGWP*LSGARSSCSQG
Trigger: TCCTTGTGAGCAAGAAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000531865.5
ENST00000533076.5
CDS CCA 72 bp CCTAGCAGCTTGACAGAGGCACCCAACAAGGAGTACTaGGAACAGGAACAGACCAGGGGCTCAGGATCAGAG +
Preference number: 6 (lower is better)
Translates to: PSSLTEAPNKEY*EQEQTRGSGSE
Trigger: CTCTGATCCTGAGCCCCTGGTCTGTTCCTGTTCCCAGTACTCCTTGTTGGGTGCCTCTGTCAAGCTGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524928.1
CDS CAA 72 bp CCTCATGGGGGATCTCATGCAGGAGGATGGCCATGGTaGTCAGGAGCCCGATCTTCTTGCTCACAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: PHGGSHAGGWPW*SGARSSCSQGS
Trigger: GCTTCCTTGTGAGCAAGAAGATCGGGCTCCTGACAACCATGGCCATCCTCCTGCATGAGATCCCCCATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354884.8
ENST00000362021.9
ENST00000531865.5
ENST00000533076.5
CDS CCA 72 bp GCACTGTTGGCCTTCCTTAGACCGCCAACTTCTCCCTaGTGGCCCAGCTTGTCTTCTGAAGCTTTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: ALLAFLRPPTSP*WPSLSSEAFCP
Trigger: TGGACAGAAAGCTTCAGAAGACAAGCTGGGCCACCAGGGAGAAGTTGGCGGTCTAAGGAAGGCCAACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS CAA 72 bp TTCCTTAGACCGCCAACTTCTCCCTGGTGGCCCAGCTaGTCTTCTGAAGCTTTCTGTCCATCTCACCCCACC +
Preference number: 6 (lower is better)
Translates to: FLRPPTSPWWPS*SSEAFCPSHPT
Trigger: GGTGGGGTGAGATGGACAGAAAGCTTCAGAAGACAAGCTGGGCCACCAGGGAGAAGTTGGCGGTCTAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5
CDS TCA 72 bp GGCCCATACAACTGCCAGGACGTTCTGTTCCCTCCCTaGGTTCCAAAATGGAATCCCTGGGTTAGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: GPYNCQDVLFPP*VPKWNPWVSFL
Trigger: CAAGAAACTAACCCAGGGATTCCATTTTGGAACTCAGGGAGGGAACAGAACGTCCTGGCAGTTGTATGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533076.5