RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC39A11 (Homo sapiens)

Ensembl gene IDs: ENSG00000133195

Ensembl transcript IDs: ENST00000255559.7, ENST00000542342.6, ENST00000578620.1, ENST00000579018.5, ENST00000579319.1, ENST00000579491.1, ENST00000579732.5, ENST00000579988.1, ENST00000580557.5, ENST00000581005.1, ENST00000581581.1, ENST00000582179.5, ENST00000582769.5, ENST00000583146.5, ENST00000583507.1, ENST00000583715.5, ENST00000584129.1, ENST00000633901.1, ENST00000633986.1

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGATGAGCAGTGCGATCCTCCTCCAGCTGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGG +
Preference number: 1 (lower is better)
Translates to: QDEQCDPPPAAAAGL*QIPSRRHRDSRTLW
Trigger: CCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR CCA 90 bp CTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTaGAAGGCCAGTGGCTGCCGCCTTCTTTCTCTGATATGCCTCACC +
Preference number: 1 (lower is better)
Translates to: LCQIPSRRHRDSRTL*KASGCRLLSLICLT
Trigger: GGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR CCA 90 bp TCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCTGATATGCCTCACCATTCTCACTCT +
Preference number: 1 (lower is better)
Translates to: SLEKAQGQQDPLEGQ*LPPSFSDMPHHSHS
Trigger: AGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR GCA 90 bp TCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATATGCCTCACCATTCTCACTCTTGTC +
Preference number: 1 (lower is better)
Translates to: SRRHRDSRTLWKASG*RLLSLICLTILTLV
Trigger: GACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR TCA 90 bp CCTCTCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATaGTGCTCCAGTTCCAACATTCTAGATGGGGAGAGGCTCAGCAGT +
Preference number: 1 (lower is better)
Translates to: PLWAGSALEGSLLSL*CSSSNILDGERLSS
Trigger: ACTGCTGAGCCTCTCCCCATCTAGAATGTTGGAACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 90 bp GGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTaGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTCCAACATTC +
Preference number: 1 (lower is better)
Translates to: GEVKEDMLLSGLARP*KVACYLYDAPVPTF
Trigger: GAATGTTGGAACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR TCA 90 bp AGAAATTTGGAAAGCGCGACAAATGGCCTTGCTCCTGGAATCCATTaGCAGCAGAGGCCTCCGAACAAACCCACACTCTGTCTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: RNLESATNGLAPGIH*QQRPPNKPTLCLSL
Trigger: AAGAGACAGACAGAGTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCAAATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR TCA 90 bp TTCTCAGCAGAGCCCACTGAAAGTCTCACGTGTGCCTTTAACCAATaGGGATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTG +
Preference number: 1 (lower is better)
Translates to: FSAEPTESLTCAFNQ*GWQALSVFEVDRSL
Trigger: CAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGTTAAAGGCACACGTGAGACTTTCAGTGGGCTCTGCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR TCA 90 bp TCACCCTTGGAAGCAATTGAATGTGTAAACTCTGAGAGCAGACACTaGCAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTT +
Preference number: 1 (lower is better)
Translates to: SPLEAIECVNSESRH*QCNACIPDSWAAFL
Trigger: AAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGAGTTTACACATTCAATTGCTTCCAAGGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 90 bp TTTAATGTGAAGAAAGAAGCTTGTTGTCCCATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCTTTCCCGGGGTCCGAAGCGTCTCAG +
Preference number: 1 (lower is better)
Translates to: FNVKKEACCPIEANH*CFFVWPFPGSEASQ
Trigger: CTGAGACGCTTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 90 bp AATGAGGATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTaGTACCCCTGTTGGAGAAGCTATGTAAGAAGGAGTAGGCTGGCT +
Preference number: 1 (lower is better)
Translates to: NEDGRPYLCLKWTGH*YPCWRSYVRRSRLA
Trigger: AGCCAGCCTACTCCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 90 bp AGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTaGAGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTT +
Preference number: 1 (lower is better)
Translates to: RPYLCLKWTGHCYPC*RSYVRRSRLASGLV
Trigger: AACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 90 bp GTGCCTTTAACCAATGAGGATGGCAGGCCTTATCTGTGTTTGAAGTaGACAGGTCATTGCTACCCCTGTTGGAGAAGCTATGTAAGAAGG +
Preference number: 1 (lower is better)
Translates to: VPLTNEDGRPYLCLK*TGHCYPCWRSYVRR
Trigger: CCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGTTAAAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 90 bp TCAACCAATCAAACCTCTGAATGTGTCTTCAATTTTGATCATCAGTaGTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTG +
Preference number: 1 (lower is better)
Translates to: STNQTSECVFNFDHQ*FGRTYIDPAQGWPL
Trigger: CAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATTGAAGACACATTCAGAGGTTTGATTGGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp CTCCAGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGGTTTGGACAACAAATaGGAAATGAAGGTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LQLLPPGCARFPREGTGTGLDNK*EMKVLG
Trigger: GCCCAGCACCTTCATTTCTCATTTGTTGTCCAAACC...TGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCTTCCTTTCCCATCCTaGGCCCTCTGGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAELPFPS*ALWQGL
Trigger: CAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCTGGCCACTCTGCCCTaGGTCACTAGGCCACCAAAA +
Preference number: 2 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAELATLP*VTRPPK
Trigger: TTTTGGTGGCCTAGTGACTCAGGGCAGAGTGGCCAG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACAGACATGCTCCTCTCTaGGCTGGCTCGGCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: RQMALLLESIDSRGLRTNRHAPL*AGSALE
Trigger: TTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCT...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCCACAGGGCTCACTGTaGGTTCACAGTTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEPQGSL*VHSCPH
Trigger: ATGAGGACAACTGTGAACTCACAGTGAGCCCTGTGG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCAATGCCTGCATACCTaGCTCCTGGGCTGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIQCLHT*LLGCLP
Trigger: AGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp CTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACAGAGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: LHFLPHWCYVLSFWTGHRGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...TCTGTGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR TCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCTTCCTTTCCCATCCTaGGCCCTCTGGCAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWLPFPS*ALWQGL
Trigger: CAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAG...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTGTGACCTTGAGGAGTTaGGAGGCAGATAGAAGGTCC +
Preference number: 2 (lower is better)
Translates to: SGLARPWKVACYLYDAPVVTLRS*EADRRS
Trigger: GGACCTTCTATCTGCCTCCCAACTCCTCAAGGTCAC...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATTGTGCCTTTAACCAATaGGGATGGCAGGCCTTATCT +
Preference number: 2 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDCAFNQ*GWQALS
Trigger: AGATAAGGCCTGCCATCCTCATTGGTTAAAGGCACA...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTTGCTGTTTCTTCGTATaGCCTTTCCCGGGGTCCGAA +
Preference number: 2 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLCCFFV*PFPGSE
Trigger: TTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCA...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGAGACATGCTCCTCTCTaGGCTGGCTCGGCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWRHAPL*AGSALE
Trigger: TTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCT...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAAATGGCCTTGCTCCTaGAATCCATTGACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDKWPCS*NPLTAE
Trigger: CTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTT...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CAA 90 bp AAGAAATTTGGAAAGCGCGACAAATGGCCTTGCTCCTGGAATCCATaGACAGCAGAGGCCTCCGAACAAACCCACACTCTGTCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: KKFGKRDKWPCSWNP*TAEASEQTHTLSVS
Trigger: AGAGACAGACAGAGTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCAAATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGGAATCTGTATTTCCATaGCACCTTAAAATTCCCCAT +
Preference number: 2 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALESVFP*HLKIPH
Trigger: ATGGGGAATTTTAAGGTGTCATGGAAATACAGATTC...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCT +
Preference number: 2 (lower is better)
Translates to: RQMALLLESIDSRGLRTNIEANH*CFFVWP
Trigger: AGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTAT...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp GCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 2 (lower is better)
Translates to: ALAPLLATLVLCFVFLDWWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...CCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGGGCTGGCTCGGCCTTaGAAGGTAGCTTGCTATCTT +
Preference number: 2 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWGLARP*KVACYL
Trigger: AAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACAGAATTTTCTAGTGCATGCAGTAGTAGGGTaGGTGATTCGGAGGGATAGG +
Preference number: 2 (lower is better)
Translates to: ATLVLCFVFLDWPQNFLVHAVVG*VIRRDR
Trigger: CCTATCCCTCCGAATCACTCACCCTACTACTGCATG...CACTAGAAAATTCTGTGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR GCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTACTAGGCCACCAAAATaGTTAGGAGACGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSITRPPK*LGDVFW
Trigger: CCAAAAGACGTCTCCTAAGCATTTTGGTGGCCTAGT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp AATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGAGGTGCTGGGCCAGATaGCAGTTTAGCTCCATGCAG +
Preference number: 2 (lower is better)
Translates to: NAALAPLLATLVLCFVFLRCWAR*QFSSMQ
Trigger: CTGCATGGAGCTAAACTGGCATCTGGCCCAGCACCT...CAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGGAAAGCGCGACAAATaGCCTTGCTCCTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWGKRDK*PCSWNP
Trigger: TGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CAA 90 bp TCACGTGTGCCTTTAACCAATGAGGATGGCAGGCCTTATCTGTGTTaGAAGTGGACAGGTCATTGCTACCCCTGTTGGAGAAGCTATGTA +
Preference number: 2 (lower is better)
Translates to: SRVPLTNEDGRPYLC*KWTGHCYPCWRSYV
Trigger: TACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGTTAAAGGCACACGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTCTGGCCACTCTGCCCTaGGTCACTAGGCCACCAAAA +
Preference number: 2 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPLATLP*VTRPPK
Trigger: TTTTGGTGGCCTAGTGACTCAGGGCAGAGTGGCCAG...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGACAACAAATGAGAAATaGAGGTGCTGGGCCAGATGC +
Preference number: 2 (lower is better)
Translates to: ALAPLLATLVLCFVFLDWTTNEK*RCWARC
Trigger: GCATCTGGCCCAGCACCTTCATTTCTCATTTGTTGT...CCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR GCA 90 bp TTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCAGGAGGGATAGGACAGTaGTGGCATTTCTCTCACTAT +
Preference number: 2 (lower is better)
Translates to: LAPLLATLVLCFVFLDWPGGIGQ*WHFSHY
Trigger: ATAGTGAGAGAAATGCCAGCACTGTCCTATCCCTCC...TGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR CCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTTGCTGTTTCTTCGTATaGCCTTTCCCGGGGTCCGAA +
Preference number: 2 (lower is better)
Translates to: RSYVRRSRLASGLVRLILCCFFV*PFPGSE
Trigger: TTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCA...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp AATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGCCGCCTTCTTTCTCTaGTATGCCTCACCATTCTCA +
Preference number: 2 (lower is better)
Translates to: NAALAPLLATLVLCFVFLAAFFL*YASPFS
Trigger: TGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGC...CAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGAGAGAGTCCATTCAGTaGCCAAAACAAAGAATCTGT +
Preference number: 2 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWRESIQ*PKQRIC
Trigger: ACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTCCACAGGGCTCACTGTaGGTTCACAGTTGTCCTCAT +
Preference number: 2 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPPQGSL*VHSCPH
Trigger: ATGAGGACAACTGTGAACTCACAGTGAGCCCTGTGG...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGAAATGGCTCCTTCTTTaGGTAATTGAAGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWKWLLL*VIEEFE
Trigger: CTCAAACTCTTCAATTACTCAAAGAAGGAGCCATTT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp ACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACAGAATTTTCTAGTGCTTTGGCCAGTTTAGCTCCATaGAGTAGTAGGGTGAGTGAT +
Preference number: 2 (lower is better)
Translates to: TGAMFCLSGLATEFSSALASLAP*SSRVSD
Trigger: ATCACTCACCCTACTACTGCATGGAGCTAAACTGGC...CAAAGCACTAGAAAATTCTGTGGCCAGTCCAGAAAGACAAAACATAGCACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR GCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTACTAGGCCACCAAAATaGTTAGGAGACGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPTRPPK*LGDVFW
Trigger: CCAAAAGACGTCTCCTAAGCATTTTGGTGGCCTAGT...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGAATCTGTATTTCCATaGCACCTTAAAATTCCCCAT +
Preference number: 2 (lower is better)
Translates to: RSYVRRSRLASGLVRLILESVFP*HLKIPH
Trigger: ATGGGGAATTTTAAGGTGTCATGGAAATACAGATTC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCATCTGAGAGCAGACACTaGCAATGCAATGCCTGCATA +
Preference number: 2 (lower is better)
Translates to: HNIPFLLILITVMRSCPSSESRH*QCNACI
Trigger: TATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGA...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCAAAATGGCCTTGCTCCTaGAATCCATTGACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: HNIPFLLILITVMRSCPSKWPCS*NPLTAE
Trigger: CTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTT...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR GCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCAATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCT +
Preference number: 2 (lower is better)
Translates to: HNIPFLLILITVMRSCPSIEANH*CFFVWP
Trigger: AGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTAT...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR TCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCAAGCTTGCTATCTTTATaGTGCTCCAGTTCCAACATT +
Preference number: 2 (lower is better)
Translates to: HNIPFLLILITVMRSCPSSLLSL*CSSSNI
Trigger: AATGTTGGAACTGGAGCATCATAAAGATAGCAAGCT...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 72 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTaGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCT +
Preference number: 3 (lower is better)
Translates to: SLGGGKGRHAPL*AGSALEGSLLS
Trigger: AGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGCTTAGGAGACGTCTTTaGGTAGCTCGCTTCTATAGG +
Preference number: 3 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALLRRRL*VARFYR
Trigger: CCTATAGAAGCGAGCTACCAAAAGACGTCTCCTAAG...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR TCA 72 bp GAAAGCGCGACAAATGGCCTTGCTCCTGGAATCCATTaGCAGCAGAGGCCTCCGAACAAACCCACACTCTGT +
Preference number: 3 (lower is better)
Translates to: ESATNGLAPGIH*QQRPPNKPTLC
Trigger: ACAGAGTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATGAAGTGGACAGGTCATaGCTACCCCTGTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDEVDRS*LPLLEK
Trigger: CTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTC...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCTTAGGAGACGTCTTTaGGTAGCTCGCTTCTATAGG +
Preference number: 3 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAELRRRL*VARFYR
Trigger: CCTATAGAAGCGAGCTACCAAAAGACGTCTCCTAAG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 72 bp AAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTaGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTT +
Preference number: 3 (lower is better)
Translates to: KEDMLLSGLARP*KVACYLYDAPV
Trigger: AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTTTGAGTTCTAGCAGTTaGCTGGTGTCTCCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSILSSSS*LVSPSL
Trigger: GAGACTTGGAGACACCAGCAAACTGCTAGAACTCAA...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 72 bp AAGAAAGAAGCTTGTTGTCCCATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCTTTCCCGGGGTCCGAA +
Preference number: 3 (lower is better)
Translates to: KKEACCPIEANH*CFFVWPFPGSE
Trigger: TTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCTTCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 72 bp ATGCCTAAGAAATTTGGAAAGCGCGACAAATGGCCTTaGTCCTGGAATCCATTGACAGCAGAGGCCTCCGAA +
Preference number: 3 (lower is better)
Translates to: MPKKFGKRDKWP*SWNPLTAEASE
Trigger: TTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCAAATTTCTTAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 72 bp AAGAAATTTGGAAAGCGCGACAAATGGCCTTGCTCCTaGAATCCATTGACAGCAGAGGCCTCCGAACAAACC +
Preference number: 3 (lower is better)
Translates to: KKFGKRDKWPCS*NPLTAEASEQT
Trigger: GGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCCAAATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATTGTGAAGAAAGAAGCTaGTTGTCCCATAGAAGCCAA +
Preference number: 3 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDCEERS*LSHRSQ
Trigger: TTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACA...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 72 bp GGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTaGTACCCCTGTTGGAGAAGCTATGTAAGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GRPYLCLKWTGH*YPCWRSYVRRS
Trigger: ACTCCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 72 bp CAAGTTCAAGACCCTGGCACTCTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCCAAATCCAACTCCAAC +
Preference number: 3 (lower is better)
Translates to: QVQDPGTLKGSR*RLFYSPKSNSN
Trigger: GTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGGGTCTTGAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
3UTR CCA 72 bp ACCAATGAGGATGGCAGGCCTTATCTGTGTTTGAAGTaGACAGGTCATTGCTACCCCTGTTGGAGAAGCTAT +
Preference number: 3 (lower is better)
Translates to: TNEDGRPYLCLK*TGHCYPCWRSY
Trigger: ATAGCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCTCTGGCAAGGCCTGTaGCAGCTCAAGAGTTTTTGT +
Preference number: 3 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWLWQGL*QLKSFC
Trigger: ACAAAAACTCTTGAGCTGCAACAGGCCTTGCCAGAG...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTTGCTCCTGGAATCCATaGACAGCAGAGGCCTCCGAA +
Preference number: 3 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPCSWNP*TAEASE
Trigger: TTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCA...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR TCA 72 bp GAAGCAATTGAATGTGTAAACTCTGAGAGCAGACACTaGCAATGCAATGCCTGCATACCTGACTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: EAIECVNSESRH*QCNACIPDSWA
Trigger: AGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGAGTTTACACATTCAATTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGTCATTGCTACCCCTGTaGGAGAAGCTATGTAAGAAG +
Preference number: 3 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWSLLPL*EKLCKK
Trigger: CTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGA...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp AATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGTGGAAACCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 3 (lower is better)
Translates to: NAALAPLLATLVLCFVFLWKPGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGGTTTCCA...CAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR-3UTR CAA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGAAATGCCTAAGAAATTaGGAAAGCGCGACAAATGGC +
Preference number: 3 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWKCLRN*ESATNG
Trigger: GCCATTTGTCGCGCTTTCCAAATTTCTTAGGCATTT...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR GCA 72 bp CAAACCTCTGAATGTGTCTTCAATTTTGATCATCAGTaGTTCGGAAGAACGTACATAGACCCAGCCCAAGGT +
Preference number: 3 (lower is better)
Translates to: QTSECVFNFDHQ*FGRTYIDPAQG
Trigger: ACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATTGAAGACACATTCAGAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR CCA 72 bp AATTTTTACCTTGAAAATCTATATTGTGGGTCAGAGTaGAGATATGATCAGCAGCAGGCCAAGGGACAGGCC +
Preference number: 3 (lower is better)
Translates to: NFYLENLYCGSE*RYDQQQAKGQA
Trigger: GGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGACCCACAATATAGATTTTCAAGGTAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581581.1
3UTR-3UTR CAA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTAAATGCCTAAGAAATTaGGAAAGCGCGACAAATGGC +
Preference number: 3 (lower is better)
Translates to: RSYVRRSRLASGLVRLILKCLRN*ESATNG
Trigger: GCCATTTGTCGCGCTTTCCAAATTTCTTAGGCATTT...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACATGTGAAGAAAGAAGCTaGTTGTCCCATAGAAGCCAA +
Preference number: 3 (lower is better)
Translates to: LKRESIQWPKQRICISMTCEERS*LSHRSQ
Trigger: TTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACA...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
3UTR-3UTR CAA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCAACTGTGAGTTCACAGTaGTCCTCATCCCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: HNIPFLLILITVMRSCPSTVSSQ*SSSPFL
Trigger: AAGGAAAGGGGATGAGGACAACTGTGAACTCACAGT...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CTCCAGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQLLPPGCARFPREGTGTAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...TGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCCGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp CCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGACGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGCARFPREGTGTAGPSGRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...TCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp AAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGAGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGTPRPGLTDGPLLMRQGAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...TCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR CCA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGAGTGCCAGGGTCGTCTaGGGGTCTTCTGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQSARVV*GSSAAP
Trigger: TGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACT...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR TCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCGGCAAGCAGGTCTCCTaGTGTGCAAGCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFGKQVS*CASCSW
Trigger: CCAGCTGCAGCTTGCACATCAGGAGACCTGCTTGCC...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGCGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGTGCACCAGTTCCACATaGCTGGGGAGGCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQCTSST*LGRPHS
Trigger: ACTGTGAGGCCTCCCCAGCCATGTGGAACTGGTGCA...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp GGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GCARFPREGTGTAGPSGRRAEVQ*QGRLGV
Trigger: GACCCCCAGACGACCCTGGCACTGAACTTCGGCTCT...CCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp CCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGCARFPREGTGTAGPSGGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...TCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR TCA 90 bp GCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGCATGCAGTAGTAGGGTaGGTGATTCGGAGGGATAGG +
Preference number: 4 (lower is better)
Translates to: AGLCQIPSRRHRDSRTLWHAVVG*VIRRDR
Trigger: CCTATCCCTCCGAATCACTCACCCTACTACTGCATG...CCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR TCA 90 bp ACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGATCACAGGAATCCCCACTCCACTaGCAGGGCCTGCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: TPRPGLTDGPLLMRQGSQESPLH*QGLHSP
Trigger: AGGACTATGCAGGCCCTGTCAGTGGAGTGGGGATTC...CTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR TCA 90 bp AAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGACGGGCCCCTTCTCATaGGGCAAGGATCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: KRDSEARPHRRAPSHEARTGPFS*GKDHRS
Trigger: TGACCTGTGATCCTTGCCTCATGAGAAGGGGCCCGT...CCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp AGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGGAATCCCGGATCCTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SGDMISSRPRDRPRNPGSSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...GGATCCGGGATTCCTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR GCA 90 bp GGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGCGTCTGGGGGTCTTCTaGTGCACCAGTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: GCARFPREGTGTAGPSGRRLGVF*CTSSTW
Trigger: CCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACG...CCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp ACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGATCACAGCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPRPGLTDGPLLMRQGSQPLEGQ*LPPSFS
Trigger: AGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGG...CTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR CCA 90 bp ACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGATCACAGGGGTCCATTCCCCTGTaGGAGACCAAGCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: TPRPGLTDGPLLMRQGSQGSIPL*ETKPLV
Trigger: CACCAATGGCTTGGTCTCCCACAGGGGAATGGACCC...CTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp CGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAACCCCCACGTCCATATTaGCTGACTCAGCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAVPDSLEKAQGQQDPLEPPRPY*LTQLSV
Trigger: GACACTGAGCTGAGTCAGGCAATATGGACGTGGGGG...TTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp GGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGAGGTGCTGGGCCAGATaGCAGTTTAGCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GCARFPREGTGTAGPSGRRCWAR*QFSSMQ
Trigger: CTGCATGGAGCTAAACTGGCATCTGGCCCAGCACCT...CCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp AAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGGCAGGTCTCCTGATGTaGAAGCTGCAGCTGGAACGT +
Preference number: 4 (lower is better)
Translates to: KRDSEARPHRRAPSHEARAGLLM*KLQLER
Trigger: ACGTTCCAGCTGCAGCTTGCACATCAGGAGACCTGC...CCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR CCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCGATGTGACCACACTCTaGATACCCAGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFDVTTL*IPSPLE
Trigger: TTCCAGAGGGCTGGGTATCCAGAGTGTGGTCACATC...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR TCA 90 bp GGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGAGCAAAGAGCTTGCCTaGAAGAAGCCCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: GCARFPREGTGTAGPSGRSKELA*KKPSST
Trigger: GGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCT...CCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGCGTGGCCATCTCAACTaGTGGGGCCAGAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALRGHLN*WGQKRP
Trigger: TGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACG...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: GCARFPREGTGTAGPSGRWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...CCTTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCCAGGGGCTCCACCATaGCGCTCAGCTGCCCATACC +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNPGAPP*RSAAHT
Trigger: GGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGCCAGTTTAGCTCCATaGAGTAGTAGGGTGAGTGAT +
Preference number: 4 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQASLAP*SSRVSD
Trigger: ATCACTCACCCTACTACTGCATGGAGCTAAACTGGC...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALPLEGQ*LPPSFS
Trigger: AGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGG...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGTATAGTGATGGCCAAGATGAGCAGTGCGATCCTCCTCCAGCTGCTGCCGCCGCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CIVMAKMSSAILLQLLPPPLEGQ*LPPSFS
Trigger: AGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGG...CGGCGGCAGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGAGACATGCTCCTCTCTaGGCTGGCTCGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALRHAPL*AGSALE
Trigger: TTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCT...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCTGGATACAGTAGGGTaGCCTCTCCAGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAELDTVG*PLQPPL
Trigger: CAGTGGGGGCTGGAGAGGGCACCCTACTGTATCCAG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAERAEVQ*QGRLGV
Trigger: GACCCCCAGACGACCCTGGCACTGAACTTCGGCTCT...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CTCCAGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGGGATAGGACAGTGCTaGCATTTCTCTCACTATTCA +
Preference number: 4 (lower is better)
Translates to: LQLLPPGCARFPREGTGTGIGQC*HFSHYS
Trigger: TGAATAGTGAGAGAAATGCCAGCACTGTCCTATCCC...TGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp AAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGAAGGATCACAGGTCATaGGATGTGACCACACTCTGG +
Preference number: 4 (lower is better)
Translates to: KRDSEARPHRRAPSHEARKDHRS*DVTTLW
Trigger: CCAGAGTGTGGTCACATCCCATGACCTGTGATCCTT...CCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR TCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAAGCCGCTCCAAGGGTaGAGCCAACAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDKPLQG*SQQPQG
Trigger: TCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTT...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCTTCCTTTCCCATCCTaGGCCCTCTGGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNLPFPS*ALWQGL
Trigger: CAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCAATGCCTGCATACCTaGCTCCTGGGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEQCLHT*LLGCLP
Trigger: AGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GAAGTCAGTCGGTGTCAGGAAGGCAGGTTAAGTCCAGGGCAGGAAACCAAGTTCGGGCATGGGGAGAGGTaGAGTCAGTCGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: EVSRCQEGRLSPGQETKFGHGER*SQSVSG
Trigger: TCCTGACACCGACTGACTTCACCTCTCCCCATGCCC...GAACTTGGTTTCCTGCCCTGGACTTAACCTGCCTTCCTGACACCGACTGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR TCA 90 bp CGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGGACCCTCTGGAAGGTTTGGACAACAAATaGGAAATGAAGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RAVPDSLEKAQGQQDPLEGLDNK*EMKVLG
Trigger: GCCCAGCACCTTCATTTCTCATTTGTTGTCCAAACC...TTCCAGAGGGTCCTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDRAEVQ*QGRLGV
Trigger: GACCCCCAGACGACCCTGGCACTGAACTTCGGCTCT...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CCTGGCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGTLKGSRCRLFYSPKSNAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...GTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR GCA 90 bp GCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCCACGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ALSKVADAVFSIAPNPTPRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...TGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCCGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCCAGGTGGAGAAGCCTaGCCCTCGCAAGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPPGGEA*PSQGKA
Trigger: AGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCCAGGTGGAGAAGCCTaGCCCTCGCAAGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIPGGEA*PSQGKA
Trigger: AGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTAGCCCCCAGAGGACGTaGCCATCTCAACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVSPQRT*PSQLLG
Trigger: CCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCT...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGAGTGCCAGGGTCGTCTaGGGGTCTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWSARVV*GSSAAP
Trigger: GGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGCCATTACCACTGATCTaGGCTTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALPLPLI*ASGMMS
Trigger: CGACATCATCCCCGAAGCCCAGATCAGTGGTAATGG...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTGTGCAAGCTGCAGCTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFCASCS*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGCTGCAGCTTGCACA...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTAAGCCGCTCCAAGGGTaGAGCCAACAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIKPLQG*SQQPQG
Trigger: TCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGTCCATCAGCCCCCGCTaGCACTCTCTCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWSISPR*HSLAGS
Trigger: GGAGCCGGCGAGAGAGTGGCAGCGGGGGCTGATGGA...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCTCCATCAGCCCCCGCTaGCACTCTCTCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFSISPR*HSLAGS
Trigger: GGAGCCGGCGAGAGAGTGGCAGCGGGGGCTGATGGA...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCTGGATACAGTAGGGTaGCCTCTCCAGCCCCCACTG +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPLDTVG*PLQPPL
Trigger: CAGTGGGGGCTGGAGAGGGCACCCTACTGTATCCAG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTGAGAGCTGCCCCAGCTaGTGTCATCCCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVESCPS*CHPPGE
Trigger: TTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTC...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCTGGGGGTCTTCTGCTaGACCCAAGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNLGVFC*TQVRHQ
Trigger: CTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATCGTCTGGGGGTCTTCTaGTGCACCCAAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDRLGVF*CTQVRH
Trigger: ATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACG...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCCGATCCTCCTCCAGCTaGTGCCGCCGGGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFRSSSS*CRRAVP
Trigger: TGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGATCG...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp GAAGTCAGTCGGTGTCAGGAAGGCAGGTTAAGTCCAGGGCAGGAAACCAAGTTCGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EVSRCQEGRLSPGQETKFGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...GAACTTGGTTTCCTGCCCTGGACTTAACCTGCCTTCCTGACACCGACTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR CCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACAGAAAGCTCTCCAGGTaGAGAAGCCTGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNRKLSR*RSLPLA
Trigger: TGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCT...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGGGGCTGGCTCGGCCTTaGAAGGTAGCTTGCTATCTT +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEGLARP*KVACYL
Trigger: AAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCC...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATGACCCAGCCCAAGGTTaGCCTTTGGGGTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDDPAQG*PLGSDS
Trigger: GCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTC...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGTTTGTCTTTCTGGACTaGCCACAGAATTTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQFVFLD*PQNFLV
Trigger: CACTAGAAAATTCTGTGGCCAGTCCAGAAAGACAAA...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp AGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGGAATCCCGGATCCCATGACATGAGGGCATaGGGAGAGGTGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SGDMISSRPRDRPRNPGSHDMRA*GEVKSV
Trigger: GACTGACTTCACCTCTCCCCATGCCCTCATGTCATG...GGATCCGGGATTCCTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579319.1
ENST00000581581.1
CDS-3UTR CCA 90 bp CTCCAGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACATTTCTTGCAGCTAAATaGAAACCTGGAACGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LQLLPPGCARFPREGTGTFLAAK*KPGTLC
Trigger: ACACAACGTTCCAGGTTTCCATTTAGCTGCAAGAAA...TGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR CAA 72 bp GGAAAGCGCGACAAATGGCCTTGCTCCTGGAATCCATaGACAGCAGAGGCCTCCGAACAAACCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: GKRDKWPCSWNP*TAEASEQTHTL
Trigger: CAGAGTGTGGGTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCTGGCCACTCTGCCCTaGGTCACTAGGCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSILATLP*VTRPPK
Trigger: TTTTGGTGGCCTAGTGACTCAGGGCAGAGTGGCCAG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTGCTCCTGGAATCCATTaGCAGCAGAGGCCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIAPGIH*QQRPPN
Trigger: GTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGC...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGCAATGCCTGCATACCTaGCTCCTGGGCTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWQCLHT*LLGCLP
Trigger: AGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTG...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGGAATCCCGGATCCGGAACAGATAAGACATaGCATGAGGGCATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SGDMISSRPRDRPRNPGSGTDKT*HEGMGR
Trigger: TCTCCCCATGCCCTCATGTCATGTCTTATCTGTTCC...GGATCCGGGATTCCTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579319.1
ENST00000581581.1
CDS-3UTR TCA 90 bp AAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGGAAAGACAGTCCTGGTaGTGTTTTCATCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: KRDSEARPHRRAPSHEARERQSW*CFHLRN
Trigger: GTTTCTCAGATGAAAACATCACCAGGACTGTCTTTC...CCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGTACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPYEHES*PSCCHP
Trigger: GGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTA...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGAGAAAGCTCTCCAGGTaGAGAAGCCTGCCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWRKLSR*RSLPLA
Trigger: TGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCTACAAATCCCAGGATaGAGGCCCAGGATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAELQIPG*RPRMPV
Trigger: AACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTAGACATGCTCCTCTCTaGGCTGGCTCGGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIRHAPL*AGSALE
Trigger: TTCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGAAATGGCCTTGCTCCTaGAATCCATTGACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALKWPCS*NPLTAE
Trigger: CTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTT...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGGACCCAGCCCAAGGTTaGCCTTTGGGGTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWDPAQG*PLGSDS
Trigger: GCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTC...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGCAGGCCAACGTCCAGTaGCATCATCACTACAAATCC +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEQANVQ*HHHYKS
Trigger: GGATTTGTAGTGATGATGTCACTGGACGTTGGCCTG...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGCTCAGCAGAGCCCACTaGAAGTCTCACGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWLSRAH*KSHVCL
Trigger: AAGGCACACGTGAGACTTTCAGTGGGCTCTGCTGAG...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCTCAGCAGAGCCCACTaGAAGTCTCACGTGTGCCTT +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSILSRAH*KSHVCL
Trigger: AAGGCACACGTGAGACTTTCAGTGGGCTCTGCTGAG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp ATTGTGGGTCAGAGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGGGGAACAGATAAGACATaGCATGAGGGCATGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IVGQSGDMISSRPRDRPRGTDKT*HEGMGR
Trigger: TCTCCCCATGCCCTCATGTCATGTCTTATCTGTTCC...CCTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGACCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGAGAGCTGCCCCAGCTaGTGTCATCCCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTESCPS*CHPPGE
Trigger: TTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCTACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPYEHES*PSCCHP
Trigger: GGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTA...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATTGCCAACATGACCCCTaGAGCAAAGCCAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDCQHDP*SKAKTS
Trigger: GGAAGTCTTGGCTTTGCTGCAGGGGTCATGTTGGCA...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGACCAATAGGAAGCTaGCAACATGACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDRPIGS*QHDPCS
Trigger: GCTGCAGGGGTCATGTTGGCAGCTTCCTATTGGTCT...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTCTGGGGGTCTTCTGCTaGACCCAAGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLLGVFC*TQVRHQ
Trigger: CTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAG...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCAGAGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGGAATCCCGGCTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: SEWRYDQQQAKGQAKESRLKGSR*RLFYSP
Trigger: GGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAG...CCGGGATTCCTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR GCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGACCATGCCGCTCAGCTaGCCATACCAGAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWTMPLS*PYQKAL
Trigger: GAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACGATGGAGGCCCAGGATaGCAGTTTCCCATTACCACT +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNDGGPG*QFPITT
Trigger: AGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATC...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCT +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALIEANH*CFFVWP
Trigger: AGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTAT...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATA +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDGHLNC*GQKRPI
Trigger: TATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCC...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGAGCGTAGGGCAGGATaGGCTCAGCCAGCACCACGG +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILERRAG*AQPAPR
Trigger: CCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACTGCTGTTTCTTCGTATaGCCTTTCCCGGGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNCCFFV*PFPGSE
Trigger: TTCGGACCCCGGGAAAGGCCATACGAAGAAACAGCA...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAAGCCGCTCCAAGGGTaGAGCCAACAGCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFKPLQG*SQQPQG
Trigger: TCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTT...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR TCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATGCCGCCTTCTTTCTCTaGTATGCCTCACCATTCTCA +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDAAFFL*YASPFS
Trigger: TGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGC...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCAGGCCAACGTCCAGTaGCATCATCACTACAAATCC +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNQANVQ*HHHYKS
Trigger: GGATTTGTAGTGATGATGTCACTGGACGTTGGCCTG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGCAGGAGGTTCTCTTaGGGCCAGCAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFSRRFS*GQQFEA
Trigger: GGCCTCGAACTGCTGGCCTCAAGAGAACCTCCTGCT...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR TCA 90 bp GAAAATCTATATTGTGGGTCAGAGTGGAGATATGATCAGCAGCAGGCCAAGGGAGGGCATGGGGAGAGGTaGAGTCAGTCGGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ENLYCGSEWRYDQQQAKGGHGER*SQSVSG
Trigger: TCCTGACACCGACTGACTTCACCTCTCCCCATGCCC...TCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGACCCACAATATAGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR GCA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACATCCATCAGCCCCCGCTaGCACTCTCTCGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LKRESIQWPKQRICISMTSISPR*HSLAGS
Trigger: GGAGCCGGCGAGAGAGTGGCAGCGGGGGCTGATGGA...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTTGCCAACATGACCCCTaGAGCAAAGCCAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSICQHDP*SKAKTS
Trigger: GGAAGTCTTGGCTTTGCTGCAGGGGTCATGTTGGCA...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTAGACCAATAGGAAGCTaGCAACATGACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVRPIGS*QHDPCS
Trigger: GCTGCAGGGGTCATGTTGGCAGCTTCCTATTGGTCT...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCCTGGGGGTCTTCTGCTaGACCCAAGTGAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTLGVFC*TQVRHQ
Trigger: CTGATGCCTCACTTGGGTGCAGCAGAAGACCCCCAG...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFRAEVQ*QGRLGV
Trigger: GACCCCCAGACGACCCTGGCACTGAACTTCGGCTCT...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATTCCTCCTCCAGCTGCTaGCGCCGGGCTGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNSSSSC*RRAVPD
Trigger: ATCTGGCACAGCCCGGCGGCAGCAGCTGGAGGAGGA...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCACCATGCCGCTCAGCTaGCCATACCAGAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPTMPLS*PYQKAL
Trigger: GAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGT...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGGATGGAGGCCCAGGATaGCAGTTTCCCATTACCACT +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWDGGPG*QFPITT
Trigger: AGTGGTAATGGGAAACTGGCATCCTGGGCCTCCATC...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATA +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPGHLNC*GQKRPI
Trigger: TATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCC...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTAGCCCCCAGAGGACGTaGCCATCTCAACTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILSPQRT*PSQLLG
Trigger: CCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCT...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTCCCTCGGGGAAATTCTaGATCCCGATTCCAATGGCC +
Preference number: 4 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLPSGKF*IPIPMA
Trigger: GGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGG...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTCTACAAATCCCAGGATaGAGGCCCAGGATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVLQIPG*RPRMPV
Trigger: AACTGGCATCCTGGGCCTCCATCCTGGGATTTGTAG...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGGTGACCTTGAGGAGTTaGGAGGCAGATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPVTLRS*EADRRS
Trigger: GGACCTTCTATCTGCCTCCCAACTCCTCAAGGTCAC...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTGGAAAGCGCGACAAATaGCCTTGCTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIGKRDK*PCSWNP
Trigger: TGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCC...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCCCAAGGTTGGCCTTTaGGGTCTGATAGCATTCACA +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNPKVGL*GLIAFT
Trigger: TGTGAATGCTATCAGACCCCAAAGGCCAACCTTGGG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCAGTTCGAGGCCACCCTaGCCAACACAGCAACACCCT +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTSSRPP*PTQQHP
Trigger: AGGGTGTTGCTGTGTTGGCCAGGGTGGCCTCGAACT...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR TCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACATTCTCACTCTTGTCTaGAAGAAGCCCAGCTCTACC +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNILTLV*KKPSST
Trigger: GGTAGAGCTGGGCTTCTTTCAGACAAGAGTGAGAAT...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542342.6
CDS-3UTR TCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGAGCAGGAGGTTCTCTTaGGGCCAGCAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRSRRFS*GQQFEA
Trigger: GGCCTCGAACTGCTGGCCTCAAGAGAACCTCCTGCT...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGAGAGCTGCCCCAGCTaGTGTCATCCCCCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILESCPS*CHPPGE
Trigger: TTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTGCTGCCGCCGGGCTGTaGCAGATTCCCTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPAAAGL*QIPSRR
Trigger: CCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGC...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGACTAGGCCACCAAAATaGTTAGGAGACGTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAETRPPK*LGDVFW
Trigger: CCAAAAGACGTCTCCTAAGCATTTTGGTGGCCTAGT...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCGCGACAAATGGCCTTaGTCCTGGAATCCATTGACA +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPRDKWP*SWNPLT
Trigger: TGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTAAGTGGACAGGTCATTaGTACCCCTGTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVKWTGH*YPCWRS
Trigger: GCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTT...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGCCAGGGTCGTCTaGGGGTCTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNSARVV*GSSAAP
Trigger: GGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACT...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWPLEGQ*LPPSFS
Trigger: AGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGG...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCCCATTACCACTGATCTaGGCTTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPPLPLI*ASGMMS
Trigger: CGACATCATCCCCGAAGCCCAGATCAGTGGTAATGG...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGAGAGAGTCCATTCAGTaGCCAAAACAAAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALRESIQ*PKQRIC
Trigger: ACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCT...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTGGAAAGCGCGACAAATaGCCTTGCTCCTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLGKRDK*PCSWNP
Trigger: TGGATTCCAGGAGCAAGGCCATTTGTCGCGCTTTCC...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGTTCGAGGCCACCCTaGCCAACACAGCAACACCCT +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFSSRPP*PTQQHP
Trigger: AGGGTGTTGCTGTGTTGGCCAGGGTGGCCTCGAACT...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR TCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGCTCCTGGAATCCATTaGCAGCAGAGGCCTCCGAAC +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILAPGIH*QQRPPN
Trigger: GTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGGGCCTTATCTGTGTTTaGAGTGGACAGGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPGLICV*SGQVIA
Trigger: AGCAATGACCTGTCCACTTCAAACACAGATAAGGCC...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGTGTGCCTTTAACCAATaGGGATGGCAGGCCTTATCT +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWCAFNQ*GWQALS
Trigger: AGATAAGGCCTGCCATCCTCATTGGTTAAAGGCACA...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTCTGAGAGCAGACACTaGCAATGCAATGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVSESRH*QCNACI
Trigger: TATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGTCTGAGAGCAGACACTaGCAATGCAATGCCTGCATA +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPSESRH*QCNACI
Trigger: TATGCAGGCATTGCATTGTCAGTGTCTGCTCTCAGA...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGGGAGGAATGGGGAGTaGCTGCTAATAAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTGRNGE*LLISMQ
Trigger: CTGCATGCTTATTAGCAGTCACTCCCCATTCCTCCC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPLKGSR*RLFYSP
Trigger: GGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTCTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVLKGSR*RLFYSP
Trigger: GGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAG...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTCGCGACAAATGGCCTTaGTCCTGGAATCCATTGACA +
Preference number: 4 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLRDKWP*SWNPLT
Trigger: TGTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCG...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCAAGTGGACAGGTCATTaGTACCCCTGTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPKWTGH*YPCWRS
Trigger: GCTTCTCCAACAGGGGTAGCAATGACCTGTCCACTT...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACTGCAGCAAAGAGCTTaGCTGAAAGAAGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAPLLATLVLCFVFLDWPLQQRA*LKEAQL
Trigger: GAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAG...TGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACAAGTGCCAGGGTCGTCTaGGGGTCTTCTGCTGCACCC +
Preference number: 4 (lower is better)
Translates to: LKRESIQWPKQRICISMTSARVV*GSSAAP
Trigger: GGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACT...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGCCTCTGGAAGGCCAGTaGCTGCCGCCTTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRPLEGQ*LPPSFS
Trigger: AGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGG...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp TATTGTGGGTCAGAGTGGAGATATGATCAGCAGCAGGCCAAGGGACAGGCCAAGAACAGCGAGACCCTCTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: YCGSEWRYDQQQAKGQAKNSETL*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGAGGGTCTCGCTGTT...CTTGGCCTGTCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGACCCACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGAAATGGCCTTGCTCCTaGAATCCATTGACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWKWPCS*NPLTAE
Trigger: CTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATCATTGCTACCCCTGTTaGAGAAGCTATGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDHCYPC*RSYVRR
Trigger: CCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATG...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGGAGGGAGGGAGGAATaGGGAGTGACTGCTAATAAG +
Preference number: 4 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTGGREE*GVTANK
Trigger: CTTATTAGCAGTCACTCCCCATTCCTCCCTCCCTCC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp CTGGCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCATGACATGAGGGCATaGGGAGAGGTGAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LALSKVADAVFSIAPNPTHDMRA*GEVKSV
Trigger: GACTGACTTCACCTCTCCCCATGCCCTCATGTCATG...AGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR TCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTCTTCCTTTCCCATCCTaGGCCCTCTGGCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPLPFPS*ALWQGL
Trigger: CAGGCCTTGCCAGAGGGCTCAGGATGGGAAAGGAAG...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGATGTGTCTTCAATTTTaGTCATCAGTGCTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEMCLQF*SSVLRK
Trigger: CTTCCGAAGCACTGATGATCAAAATTGAAGACACAT...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATTACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNYEHES*PSCCHP
Trigger: GGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTA...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCTGCCAACATGACCCCTaGAGCAAAGCCAAGACTTCC +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFCQHDP*SKAKTS
Trigger: GGAAGTCTTGGCTTTGCTGCAGGGGTCATGTTGGCA...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATCGTGGCCATCTCAACTaGTGGGGCCAGAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNRGHLN*WGQKRP
Trigger: TGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACG...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATCGTCTGGGGGTCTTCTaGTGCACCCAAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNRLGVF*CTQVRH
Trigger: ATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACG...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACCCTTGGAAGGTAGCTTaGTATCTTTATGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RQMALLLESIDSRGLRTNPWKVA*YLYDAP
Trigger: TGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGG...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATA +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFGHLNC*GQKRPI
Trigger: TATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCC...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGTGACCTTGAGGAGTTaGGAGGCAGATAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWVTLRS*EADRRS
Trigger: GGACCTTCTATCTGCCTCCCAACTCCTCAAGGTCAC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGGGCTGGCTCGGCCTTaGAAGGTAGCTTGCTATCTT +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILGLARP*KVACYL
Trigger: AAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTCATTGCTACCCCTGTTaGAGAAGCTATGTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIHCYPC*RSYVRR
Trigger: CCTTCTTACATAGCTTCTCCAACAGGGGTAGCAATG...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTATCTGTGTTTGAAGTaGACAGGTCATTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: SGLARPWKVACYLYDAPVYLCLK*TGHCYP
Trigger: GGGGTAGCAATGACCTGTCCACTTCAAACACAGATA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGTATCTGTGTTTGAAGTaGACAGGTCATTGCTACCCC +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWYLCLK*TGHCYP
Trigger: GGGGTAGCAATGACCTGTCCACTTCAAACACAGATA...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp ACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACAGAATTTTCTAGTGCTTCCAGTTCCACATGGCTaGGGAGGCCTCACAGTCATG +
Preference number: 4 (lower is better)
Translates to: TLVLCFVFLDWPQNFLVLPVPHG*GGLTVM
Trigger: CATGACTGTGAGGCCTCCCCAGCCATGTGGAACTGG...AAGCACTAGAAAATTCTGTGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584129.1
3UTR CAA 72 bp CCTTTAACCAATGAGGATGGCAGGCCTTATCTGTGTTaGAAGTGGACAGGTCATTGCTACCCCTGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLTNEDGRPYLC*KWTGHCYPCWR
Trigger: TCTCCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATCCTCATTGGTTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGCCGCCTTCTTTCTCTaGTATGCCTCACCATTCTCA +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWAAFFL*YASPFS
Trigger: TGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTCCACAGGGCTCACTGTaGGTTCACAGTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILPQGSL*VHSCPH
Trigger: ATGAGGACAACTGTGAACTCACAGTGAGCCCTGTGG...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGAAATGGCTCCTTCTTTaGGTAATTGAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAEKWLLL*VIEEFE
Trigger: CTCAAACTCTTCAATTACTCAAAGAAGGAGCCATTT...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGAGACCAATAGGAAGCTaGCAACATGACCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRRPIGS*QHDPCS
Trigger: GCTGCAGGGGTCATGTTGGCAGCTTCCTATTGGTCT...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR GCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTCGTCTGGGGGTCTTCTaGTGCACCCAAGTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPRLGVF*CTQVRH
Trigger: ATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACG...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp TTTACCTTGAAAATCTATATTGTGGGTCAGAGTGGAGATATGATCAGCAGCAGGGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FTLKIYIVGQSGDMISSRGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...CCTGCTGCTGATCATATCTCCACTCTGACCCACAATATAGATTTTCAAGGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR GCA 90 bp GCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCCACTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALSKVADAVFSIAPNPTPLKGSR*RLFYSP
Trigger: GGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAG...TGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR CCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGGGAGGGAGGGAGGAATaGGGAGTGACTGCTAATAAG +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRGGREE*GVTANK
Trigger: CTTATTAGCAGTCACTCCCCATTCCTCCCTCCCTCC...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR TCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGGCCTTATCTGTGTTTaGAGTGGACAGGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWGLICV*SGQVIA
Trigger: AGCAATGACCTGTCCACTTCAAACACAGATAAGGCC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGATGTGTCTTCAATTTTaGTCATCAGTGCTTCGGAAG +
Preference number: 4 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWMCLQF*SSVLRK
Trigger: CTTCCGAAGCACTGATGATCAAAATTGAAGACACAT...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCCAACAAATCATGGCAGAAGGTaGAGCAAACACGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LSKVADAVFSIAPNPTPTNHGRR*SKHVLE
Trigger: TTCCAGGACGTGTTTGCTTCACCTTCTGCCATGATT...TGTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR TCA 90 bp ACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCACAGAATTTTCTAGTGCTTTGCACGTCCATATTGCCTaGCTCAGCTCAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGAMFCLSGLATEFSSALHVHIA*LSSVSA
Trigger: TGCAGACACTGAGCTGAGTCAGGCAATATGGACGTG...CAAAGCACTAGAAAATTCTGTGGCCAGTCCAGAAAGACAAAACATAGCACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATTGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGAGAGAGTCCATTCAGTaGCCAAAACAAAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPRESIQ*PKQRIC
Trigger: ACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCT...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCAGCTTGCTATCTTTATaGTGCTCCAGTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPSLLSL*CSSSNI
Trigger: AATGTTGGAACTGGAGCATCATAAAGATAGCAAGCT...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTAAATGGCTCCTTCTTTaGGTAATTGAAGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSIKWLLL*VIEEFE
Trigger: CTCAAACTCTTCAATTACTCAAAGAAGGAGCCATTT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp AATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGACAACAAATGAGAAATaGAGGTGCTGGGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: NAALAPLLATLVLCFVFLTTNEK*RCWARC
Trigger: GCATCTGGCCCAGCACCTTCATTTCTCATTTGTTGT...CAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR GCA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACATGGAAGGCCAGTGGCTaGCGCCTTCTTTCTCTGATA +
Preference number: 4 (lower is better)
Translates to: LKRESIQWPKQRICISMTWKASG*RLLSLI
Trigger: TATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCA...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp AAGATCAAGTTCAACTCAAGAAAGACAGTCCTGGTGATGTTTTCATCTGAGAAAGGCCAAGATGAGCAGTaGGATCCTCCTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KIKFNSRKTVLVMFSSEKGQDEQ*DPPPAA
Trigger: AGCAGCTGGAGGAGGATCGCACTGCTCATCTTGGCC...TTTCTCAGATGAAAACATCACCAGGACTGTCTTTCTTGAGTTGAACTTGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR GCA 90 bp AATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGGAGGGATAGGACAGTaGTGGCATTTCTCTCACTAT +
Preference number: 4 (lower is better)
Translates to: NAALAPLLATLVLCFVFLGGIGQ*WHFSHY
Trigger: ATAGTGAGAGAAATGCCAGCACTGTCCTATCCCTCC...CAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGAACAGCGAGACCCTCTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWNSETL*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGAGGGTCTCGCTGTT...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGGGAATAGTGGTAGGTTaGGTACAGTGGCTTACACCT +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRGIVVG*VQWLTP
Trigger: AGGTGTAAGCCACTGTACCCAACCTACCACTATTCC...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp GCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCCAGAAGCAAACACGTCCTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALSKVADAVFSIAPNPTPEANTS*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGGACGTGTTTGCTTC...TGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR CCA 90 bp GAAAATCTATATTGTGGGTCAGAGTGGAGATATGATCAGCAGCAGGCCAAGGGATATTGTGGGTCAGAGTaGAGATATGATCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ENLYCGSEWRYDQQQAKGYCGSE*RYDQQQ
Trigger: CTGCTGCTGATCATATCTCCACTCTGACCCACAATA...TCCCTTGGCCTGCTGCTGATCATATCTCCACTCTGACCCACAATATAGATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581581.1
CDS-3UTR TCA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTGAATCTGTATTTCCATaGCACCTTAAAATTCCCCAT +
Preference number: 4 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLESVFP*HLKIPH
Trigger: ATGGGGAATTTTAAGGTGTCATGGAAATACAGATTC...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCATGATACCGTTTAAATaGAAGTCAGTCCCGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFMIPFK*KSVPVR
Trigger: CCTAACCGGGACTGACTTTCATTTAAACGGTATCAT...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCACGTGGCCATCTCAACTaGTGGGGCCAGAAGAGACCA +
Preference number: 4 (lower is better)
Translates to: HNIPFLLILITVMRSCPSRGHLN*WGQKRP
Trigger: TGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACG...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTAATTTTGATCATCAGTaGTTCGGAAGAACGTACATA +
Preference number: 4 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSINFDHQ*FGRTYI
Trigger: TATGTACGTTCTTCCGAAGCACTGATGATCAAAATT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp ACATCCAGGATCATTAATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATTCTTGCCACACTGGTaGTATGTTTTGTCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TSRIINAALAPLLATLVLFLPHW*YVLSFW
Trigger: CCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAA...TAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATTAATGATCCTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTCCCAAGGTTGGCCTTTaGGGTCTGATAGCATTCACA +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPPKVGL*GLIAFT
Trigger: TGTGAATGCTATCAGACCCCAAAGGCCAACCTTGGG...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATGGAATAGTGGTAGGTTaGGTACAGTGGCTTACACCT +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNGIVVG*VQWLTP
Trigger: AGGTGTAAGCCACTGTACCCAACCTACCACTATTCC...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp ACATCCAGGATCATTAATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTACACTTCTTGCCACACTaGTGCTATGTTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSRIINAALAPLLATLVLHFLPH*CYVLSF
Trigger: GAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTG...TAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATTAATGATCCTGGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CCA 90 bp GCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTCCAGGAAACTTACAATCATaGCAGAAGGTGAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: ALSKVADAVFSIAPNPTPGNLQS*QKVKQT
Trigger: TGTTTGCTTCACCTTCTGCCATGATTGTAAGTTTCC...TGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR GCA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTCCTTGGAAGGTAGCTTaGTATCTTTATGATGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSYVRRSRLASGLVRLILPWKVA*YLYDAP
Trigger: TGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGG...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp AAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATAGTGGTAGGCACCCTTGTCTCTACTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: KSVGFLYRVMRVFRNSGRHPCLY*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGTAGAGACAAGGGTG...CCTACCACTATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CCA 90 bp TTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCATATGTTTTGTCTTTCTaGACTGGCCACAGAATTTTC +
Preference number: 4 (lower is better)
Translates to: LAPLLATLVLCFVFLDWPYVLSF*TGHRIF
Trigger: GAAAATTCTGTGGCCAGTCCAGAAAGACAAAACATA...TGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR TCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATATGATACCGTTTAAATaGAAGTCAGTCCCGGTTAGG +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNMIPFK*KSVPVR
Trigger: CCTAACCGGGACTGACTTTCATTTAAACGGTATCAT...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR GCA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACAATAGAAGCCAACCACTaGTGTTTCTTCGTATGGCCT +
Preference number: 4 (lower is better)
Translates to: LKRESIQWPKQRICISMTIEANH*CFFVWP
Trigger: AGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTAT...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CCA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATCACCCTTGTCTCTACTaGAACGTTGTGTATAGTGAT +
Preference number: 4 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNHPCLY*NVVYSD
Trigger: ATCACTATACACAACGTTCCAGTAGAGACAAGGGTG...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR TCA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACAAGCTTGCTATCTTTATaGTGCTCCAGTTCCAACATT +
Preference number: 4 (lower is better)
Translates to: LKRESIQWPKQRICISMTSLLSL*CSSSNI
Trigger: AATGTTGGAACTGGAGCATCATAAAGATAGCAAGCT...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR GCA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTAATTTTGATCATCAGTaGTTCGGAAGAACGTACATA +
Preference number: 4 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPNFDHQ*FGRTYI
Trigger: TATGTACGTTCTTCCGAAGCACTGATGATCAAAATT...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR TCA 90 bp CACAACATCCCCTTTTTATTGATATTAATCACAGTTATGAGGTCTTGTCCATCAGAATCTGTATTTCCATaGCACCTTAAAATTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HNIPFLLILITVMRSCPSESVFP*HLKIPH
Trigger: ATGGGGAATTTTAAGGTGTCATGGAAATACAGATTC...TGATGGACAAGACCTCATAACTGTGATTAATATCAATAAAAAGGGGATGTTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS GCA 90 bp GCGTGGTCCGCGGACCACCCAACCCCCTTCCAAGCTCCAGGTGGCTaGCCTTCCAAGTCCCACACTCTTGTCCTGATGGCCTCCGACCCC +
Preference number: 5 (lower is better)
Translates to: AWSADHPTPFQAPGG*PSKSHTLVLMASDP
Trigger: GGGGTCGGAGGCCATCAGGACAAGAGTGTGGGACTTGGAAGGGCAGCCACCTGGAGCTTGGAAGGGGGTTGGGTGGTCCGCGGACCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578620.1
CDS GCA 90 bp AGCAAGTGGGAGGGGCCTGGGAGCAGCTGGATTTGTAGCTGCCTCTaGTCCCAGGAATCCCGGGTACCCCCACACACCGCTAGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SKWEGPGSSWICSCL*SQESRVPPHTARVP
Trigger: GGGCACCCTAGCGGTGTGTGGGGGTACCCGGGATTCCTGGGAGCAGAGGCAGCTACAAATCCAGCTGCTCCCAGGCCCCTCCCACTTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583507.1
CDS CCA 90 bp CGTAGACCATGGCACCGGCAGCAAAGGCCAGAGCGTAGGGCAGGATaGGCTCAGCCAGCACCACGGCAAAGGCACCAAAGACCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: RRPWHRQQRPERRAG*AQPAPRQRHQRPRP
Trigger: TGGCCGGGGTCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCCATGGTCTACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
CDS GCA 90 bp AGCCAGAGCAAGTGGGAGGGGCCTGGGAGCAGCTGGATTTGTAGCTaGCTCTGCTCCCAGGAATCCCGGGTACCCCCACACACCGCTAGG +
Preference number: 5 (lower is better)
Translates to: SQSKWEGPGSSWICS*LCSQESRVPPHTAR
Trigger: CCTAGCGGTGTGTGGGGGTACCCGGGATTCCTGGGAGCAGAGGCAGCTACAAATCCAGCTGCTCCCAGGCCCCTCCCACTTGCTCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583507.1
CDS GCA 90 bp GCCGCTCAGCTGCCCATACCAGAAAGCTCTCCAGGTGGAGAAGCCTaGCCCTCGCAAGGGAAGGCTGACAGCCAGGCCCTCGGGGAAATT +
Preference number: 5 (lower is better)
Translates to: AAQLPIPESSPGGEA*PSQGKADSQALGEI
Trigger: AATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
ENST00000582769.5
CDS CCA 90 bp CAAAGCGTGGTCCGCGGACCACCCAACCCCCTTCCAAGCTCCAGGTaGCTGCCCTTCCAAGTCCCACACTCTTGTCCTGATGGCCTCCGA +
Preference number: 5 (lower is better)
Translates to: QSVVRGPPNPLPSSR*LPFQVPHSCPDGLR
Trigger: TCGGAGGCCATCAGGACAAGAGTGTGGGACTTGGAAGGGCAGCCACCTGGAGCTTGGAAGGGGGTTGGGTGGTCCGCGGACCACGCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578620.1
CDS GCA 90 bp GCCTTGGAGCATGCTGGATACAGCCCCTTCCAAGCTCCAGGTGGCTaGCCTTCCAAGTCCCACACTCTTGTCCTGATGGCCTCCGACCCC +
Preference number: 5 (lower is better)
Translates to: ALEHAGYSPFQAPGG*PSKSHTLVLMASDP
Trigger: GGGGTCGGAGGCCATCAGGACAAGAGTGTGGGACTTGGAAGGGCAGCCACCTGGAGCTTGGAAGGGGCTGTATCCAGCATGCTCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580557.5
CDS CCA 90 bp CCCCAGGTGAAGAAGGTCCCCAGCAAGGCCTGGAACACAGAGCTGTaGCCTTGGAGCATGCTGGATACAGTAGGGTGCCCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PQVKKVPSKAWNTEL*PWSMLDTVGCPLQP
Trigger: GGGCTGGAGAGGGCACCCTACTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000581005.1
ENST00000582179.5
CDS GCA 90 bp CGTAGAGCCGAAGTTCAGTGCCAGGGTCGTCTGGGGGTCTTCTGCTaGACCAGTTCCACATGGCTGGGGAGGCCTCACAGTCATGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRAEVQCQGRLGVFC*TSSTWLGRPHSHGR
Trigger: TCTGCCATGACTGTGAGGCCTCCCCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS GCA 90 bp CAACGTAGAGCCGAAGTTCAGTGCCAGGGTCGTCTGGGGGTCTTCTaGTGCACCAGTTCCACATGGCTGGGGAGGCCTCACAGTCATGGC +
Preference number: 5 (lower is better)
Translates to: QRRAEVQCQGRLGVF*CTSSTWLGRPHSHG
Trigger: GCCATGACTGTGAGGCCTCCCCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS CCA 90 bp GGCAAAGGCACCGAAGCCCCCAGAGGACGTGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATAGGAAGCTGCCAACATGACCCCTGC +
Preference number: 5 (lower is better)
Translates to: GKGTEAPRGRGHLNC*GQKRPIGSCQHDPC
Trigger: GCAGGGGTCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000583146.5
CDS CCA 90 bp CCCCAGGTGAAGAAGGTCCCCAGCAAGGCCTGGAACACAGAGCTGTaGCCTTGGAGCATGCTGGATACAGCTGCCACAGCAGCACATGGG +
Preference number: 5 (lower is better)
Translates to: PQVKKVPSKAWNTEL*PWSMLDTAATAAHG
Trigger: CCCATGTGCTGCTGTGGCAGCTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578620.1
ENST00000579018.5
CDS CCA 90 bp CAGCCACAGGGAAGAAGGCAAAGGCACCGAAGCCCCCAGAGGACGTaGCCATCTCAACTGCTGGGGCCAGAAGAGACCAATAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QPQGRRQRHRSPQRT*PSQLLGPEETNRKL
Trigger: CAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS CCA 90 bp GGCAAAGGCACCGAAGCCCCCAGAGGACGTGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATAGGAAGCTGCCAACATGACCTGTCC +
Preference number: 5 (lower is better)
Translates to: GKGTEAPRGRGHLNC*GQKRPIGSCQHDLS
Trigger: GGACAGGTCATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582179.5
CDS-3UTR CAA 90 bp AGCTGCTGCCGCCGGGCTGTGCCAGATTCCCTCGAGAAGGCACAGGGACAGCAGCACTGGTGCTATGTTTaGTCTTTCTGGACTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SCCRRAVPDSLEKAQGQQHWCYV*SFWTGH
Trigger: GTGGCCAGTCCAGAAAGACAAAACATAGCACCAGTG...CTGCTGTCCCTGTGCCTTCTCGAGGGAATCTGGCACAGCCCGGCGGCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CAA 90 bp CTCAGACTGAGGCAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCGCTGCAGCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LRLRQKGLRGQASQTGPFAAAGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGCTGCAGC...GAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTGCCTCAGTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS-3UTR CAA 90 bp AAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATGAGGCAAGGTGGGAGACCAAGCCATaGGTGTACACTGAGGGTCCA +
Preference number: 5 (lower is better)
Translates to: KRDSEARPHRRAPSHEARWETKP*VYTEGP
Trigger: TGGACCCTCAGTGTACACCAATGGCTTGGTCTCCCA...CCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS TCA 90 bp GAGGCATCAGGAGGTCAGCCAAGTAGACAAAAGCCGCTCCAAGGGTaGAGCCAACAGCCACAGGGAAGAAGGCAAAGGCACCGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: EASGGQPSRQKPLQG*SQQPQGRRQRHRSP
Trigger: GGGGCTTCGGTGCCTTTGCCTTCTTCCCTGTGGCTGTTGGCTTCACCCTTGGAGCGGCTTTTGTCTACTTGGCTGACCTCCTGATGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS CCA 90 bp CCCCAGGTGAAGAAGGTCCCCAGCAAGGCCTGGAACACAGAGCTGTaGCCTTGGAGCATGCTGGATACAGCTGCACAGGACAGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: PQVKKVPSKAWNTEL*PWSMLDTAAQDSQQ
Trigger: TTGCTGACTGTCCTGTGCAGCTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTGTTCCAGGCCTTGCTGGGGACCTTCTTCACCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583146.5
CDS CCA 90 bp GATTCCCAGTCAAGTTCCAGAGGTCCAGCTAACAGCCAGAGCAAGTaGGAGGGGCCTGGGAGCAGCTGGATTTGTAGCTGCCTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DSQSSSRGPANSQSK*EGPGSSWICSCLCS
Trigger: GGAGCAGAGGCAGCTACAAATCCAGCTGCTCCCAGGCCCCTCCCACTTGCTCTGGCTGTTAGCTGGACCTCTGGAACTTGACTGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583507.1
CDS TCA 90 bp CAAAAGGGACTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATaGGGCAAGGATCACAGGTCATGGGATGTGACCACACTCTGGATA +
Preference number: 5 (lower is better)
Translates to: QKGLRGQASQTGPFS*GKDHRSWDVTTLWI
Trigger: TATCCAGAGTGTGGTCACATCCCATGACCTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAGTCCCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS CCA 90 bp GCCCCTCGCAAGGGAAGGCTGACAGCCAGGCCCTCGGGGAAATTCTaGATCCCGATTCCAATGGCCAAATTCCTGGCACTCTCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: APRKGRLTARPSGKF*IPIPMAKFLALSKV
Trigger: TACCTTTGAGAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTTGCGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000582769.5
CDS-3UTR CAA 90 bp TCCTTAGGGGGAGGTAAAGGAAGACATGCTCCTCTCTGGGCTGGCTCGGCCTTGGCCCAAGGTTGGCCTTaGGGGTCTGATAGCATTCAC +
Preference number: 5 (lower is better)
Translates to: SLGGGKGRHAPLWAGSALAQGWP*GSDSIH
Trigger: GTGAATGCTATCAGACCCCAAAGGCCAACCTTGGGC...CAAGGCCGAGCCAGCCCAGAGAGGAGCATGTCTTCCTTTACCTCCCCCTAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS GCA 90 bp GAAACAGCACTAGGGCTGCTGGGCCTTAGTGGAGCTGCACACACATaGCCTAACTCCACGAGGGGGAATCCAGCAGAAGGATTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ETALGLLGLSGAAHT*PNSTRGNPAEGFRS
Trigger: AGACCTGAATCCTTCTGCTGGATTCCCCCTCGTGGAGTTAGGGCATGTGTGTGCAGCTCCACTAAGGCCCAGCAGCCCTAGTGCTGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578620.1
ENST00000579018.5
ENST00000583507.1
CDS GCA 90 bp AGCTGCCAACATGACCTGTCCACTAGAGAATACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCCCCAGGTGAAGAAGGTCCCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SCQHDLSTREYEHES*PSCCHPPGEEGPQQ
Trigger: TTGCTGGGGACCTTCTTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGGTCATGTTGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582179.5
CDS CCA 90 bp AGGGGGAATCCAGCAGAAGGATTCAGGTCTGGGCGGAGAGGACTGTaGAAAAGTTCTCTAATGCCTCGCTACTCAAAGCGTGGTCCGCGG +
Preference number: 5 (lower is better)
Translates to: RGNPAEGFRSGRRGL*KSSLMPRYSKRGPR
Trigger: CCGCGGACCACGCTTTGAGTAGCGAGGCATTAGAGAACTTTTCCACAGTCCTCTCCGCCCAGACCTGAATCCTTCTGCTGGATTCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578620.1
ENST00000579018.5
ENST00000583507.1
CDS CCA 90 bp CAGCAAAGAGCTTGCCTGAAAGAAGCCCAGCTCTACCTATCCGGATaGAAAGTTCACTCTCAGGGAAGAGCAGCGCGGGACCCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: QQRACLKEAQLYLSG*KVHSQGRAARDPQD
Trigger: ATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582179.5
ENST00000584129.1
CDS TCA 90 bp ACAGCAGGACCCTCTGGAAGGCCAGTGGCTGCCGCCTTCTTTCTCTaGTATGCCTCACCATTCTCACTCTTGTCTGAAAGAAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TAGPSGRPVAAAFFL*YASPFSLLSERSPA
Trigger: AGCTGGGCTTCTTTCAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542342.6
ENST00000579491.1
ENST00000582769.5
CDS TCA 90 bp ACAACTGTCCCAAAACTTCCAAGGTCAGGCCTAGGAAGTCAGGCCTaGGTGATGCTGGGGACGGATCTGCTCTTGGTCCAAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: TTVPKLPRSGLGSQA*VMLGTDLLLVQALS
Trigger: AGAGAGTGCTTGGACCAAGAGCAGATCCGTCCCCAGCATCACTCAGGCCTGACTTCCTAGGCCTGACCTTGGAAGTTTTGGGACAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS TCA 90 bp AGACGGGCCCCTTCTCATGAGGCAAGGATCACAGGTCATGGGATGTaGCCACACTCTGGATACCCAGCCCTCTGGAATTCTCCATCCAAA +
Preference number: 5 (lower is better)
Translates to: RRAPSHEARITGHGM*PHSGYPALWNSPSK
Trigger: TTTGGATGGAGAATTCCAGAGGGCTGGGTATCCAGAGTGTGGTCACATCCCATGACCTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS GCA 90 bp CTCAGGATCAGACTTCTTCTTCATCAACGTAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTCTTCTGCTGCACCCAAGTGAGGCAT +
Preference number: 5 (lower is better)
Translates to: LRIRLLLHQRRAEVQ*QGRLGVFCCTQVRH
Trigger: ATGCCTCACTTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCTGATCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS GCA 90 bp CTCAGGATCAGACTTCTTCTTCATCAACGTAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTCTTCTGCTGCACCAGTTCCACATGG +
Preference number: 5 (lower is better)
Translates to: LRIRLLLHQRRAEVQ*QGRLGVFCCTSSTW
Trigger: CCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCTGATCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS CCA 90 bp AGAGCCACACCACCCCAGATGCTCAACAGAGCAACAGCATACACGTaGGCTCATGCGTCAAGACAAAGGCTGTTACTTCCCATCACGGCA +
Preference number: 5 (lower is better)
Translates to: RATPPQMLNRATAYT*AHASRQRLLLPITA
Trigger: TGCCGTGATGGGAAGTAACAGCCTTTGTCTTGACGCATGAGCCCACGTGTATGCTGTTGCTCTGTTGAGCATCTGGGGTGGTGTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATCACAGAGCTGTGGCCTaGGAGCATGCTGGATACAGT +
Preference number: 5 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDHRAVA*EHAGYS
Trigger: ACTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTG...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTGGGCTGGCTCGGCCTaGGAAGGTAGCTTGCTATCT +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVWAGSA*EGSLLS
Trigger: AGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATTGCTCCTGGAATCCATaGACAGCAGAGGCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDCSWNP*TAEASE
Trigger: TTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCA...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS TCA 90 bp ACAGCAGGACCCTCTGGAAGGCCAGTGGCTGCCGCCTTCTTTCTCTaGTATGCCTCACCATTCTCACTCTTGTCTATCCGGATGGAAAGT +
Preference number: 5 (lower is better)
Translates to: TAGPSGRPVAAAFFL*YASPFSLLSIRMES
Trigger: ACTTTCCATCCGGATAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCTGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000579732.5
ENST00000580557.5
CDS GCA 90 bp ACCACCCCAGATGCTCAACAGAGCAACAGCATACACGTGGGCTCATaGGTCAAGACAAAGGCTGTTACTTCCCATCACGGCACAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TTPDAQQSNSIHVGS*VKTKAVTSHHGTEK
Trigger: CTTCTCTGTGCCGTGATGGGAAGTAACAGCCTTTGTCTTGACGCATGAGCCCACGTGTATGCTGTTGCTCTGTTGAGCATCTGGGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS CCA 90 bp CATTCTCACTCTTGTCTGAAAGAAGCCCAGCTCTACCTATCCGGATaGAAAGTTCACTCTCAGGGAAGAGCAGCGCGGGACCCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: HSHSCLKEAQLYLSG*KVHSQGRAARDPQD
Trigger: ATCCTGAGGGTCCCGCGCTGCTCTTCCCTGAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGACAAGAGTGAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542342.6
ENST00000579491.1
ENST00000582769.5
ENST00000583146.5
CDS CCA 90 bp GATCTGCTCTTGGTCCAAGCACTCTCTGGCTCTCTCCTTTATCCCTaGGAGGTCACCATCCCAGGGAGGTCATCTCAGGGTCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: DLLLVQALSGSLLYP*EVTIPGRSSQGLSF
Trigger: AAATGAAAGACCCTGAGATGACCTCCCTGGGATGGTGACCTCCCAGGGATAAAGGAGAGAGCCAGAGAGTGCTTGGACCAAGAGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS-3UTR CAA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTTGGGCTGGCTCGGCCTaGGAAGGTAGCTTGCTATCT +
Preference number: 5 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLWAGSA*EGSLLS
Trigger: AGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCA...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS TCA 90 bp TCTCTCACTATTCATCCTACCACCAGCCCCCACGTCCATATTGCCTaGCTCAGCTCAGTGTCTGCAGCAAAGAGCTTGCCTGAAAGAAGC +
Preference number: 5 (lower is better)
Translates to: SLTIHPTTSPHVHIA*LSSVSAAKSLPERS
Trigger: GCTTCTTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGCTGGTGGTAGGATGAATAGTGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS GCA 90 bp AGGACCCTCTGGAAGGCCAGTGGCTGCCGCCTTCTTTCTCTGATATaGCTCACCATTCTCACTCTTGTCTATCCGGATGGAAAGTTCACT +
Preference number: 5 (lower is better)
Translates to: RTLWKASGCRLLSLI*LTILTLVYPDGKFT
Trigger: AGTGAACTTTCCATCCGGATAGACAAGAGTGAGAATGGTGAGGCATATCAGAGAAAGAAGGCGGCAGCCACTGGCCTTCCAGAGGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000579732.5
ENST00000580557.5
CDS CCA 90 bp AGCCCCAAATCCAACTCCAACAGCGAGACCCTAGTTTCACACAGCTaGGGAGGCCTCAGGAAACTTACAATCATGGCAGAAGGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SPKSNSNSETLVSHS*GGLRKLTIMAEGEA
Trigger: TGCTTCACCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCTGTGTGAAACTAGGGTCTCGCTGTTGGAGTTGGATTTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR CAA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCCACAGAGCTGTGGCCTaGGAGCATGCTGGATACAGT +
Preference number: 5 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPHRAVA*EHAGYS
Trigger: ACTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTG...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCTGCTCCTGGAATCCATaGACAGCAGAGGCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPCSWNP*TAEASE
Trigger: TTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCA...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCGCGACAAATGGCCTaGCTCCTGGAATCCATTGAC +
Preference number: 5 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPARQMA*LLESID
Trigger: GTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGC...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATCTCTGGCAAGGCCTGTaGCAGCTCAAGAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDLWQGL*QLKSFC
Trigger: ACAAAAACTCTTGAGCTGCAACAGGCCTTGCCAGAG...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GACAATGCAATGCCTGCATACCTGACTCCTGGGCTGCCTTCCTTCTCAGCAGAGAGGCCTTATCTGTGTTaGAAGTGGACAGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: DNAMPAYLTPGLPSFSAERPYLC*KWTGHC
Trigger: GCAATGACCTGTCCACTTCAAACACAGATAAGGCCT...CTCTGCTGAGAAGGAAGGCAGCCCAGGAGTCAGGTATGCAGGCATTGCATTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GCATTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGGCCCCCACGTCCATATaGCCTGACTCAGCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: ALAPLLATLVLCFVFLDWAPTSI*PDSAQC
Trigger: ACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGC...CCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS TCA 90 bp CCATATTGCCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTTGCCTaGAAGAAGCCCAGCTCTACCTATCCGGATGGAAAGTTCACTCTC +
Preference number: 5 (lower is better)
Translates to: PYCLTQLSVCSKELA*KKPSSTYPDGKFTL
Trigger: GAGAGTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582179.5
ENST00000584129.1
CDS GCA 90 bp ACGTCCATATTGCCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTTaGCTGAAAGAAGCCCAGCTCTACCTATCCGGATGGAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: TSILPDSAQCLQQRA*LKEAQLYLSGWKVH
Trigger: GTGAACTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582179.5
ENST00000584129.1
CDS-3UTR CAA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACACTGTGAGTTCACAGTaGTCCTCATCCCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: RQMALLLESIDSRGLRTNTVSSQ*SSSPFL
Trigger: AAGGAAAGGGGATGAGGACAACTGTGAACTCACAGT...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACTTGAGTTCTAGCAGTTaGCTGGTGTCTCCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: RQMALLLESIDSRGLRTNLSSSS*LVSPSL
Trigger: GAGACTTGGAGACACCAGCAAACTGCTAGAACTCAA...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCTCTGGCAAGGCCTGTaGCAGCTCAAGAGTTTTTGT +
Preference number: 5 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPLWQGL*QLKSFC
Trigger: ACAAAAACTCTTGAGCTGCAACAGGCCTTGCCAGAG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TGGGAGGCAGATAGAAGGTCCCGAAGTGGAGATTTCCCTGATCTGAAGTTCCTTGAAGTGGACAGGTCATaGCTACCCCTGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: WEADRRSRSGDFPDLKFLEVDRS*LPLLEK
Trigger: CTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTC...AAGGAACTTCAGATCAGGGAAATCTCCACTTCGGGACCTTCTATCTGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CAGAGGTACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCCACAGAGCTGTGGCCTaGGAGCATGCTGGATACAGT +
Preference number: 5 (lower is better)
Translates to: QRYCSKSVGFLYRVMRVFHRAVA*EHAGYS
Trigger: ACTGTATCCAGCATGCTCCAAGGCCACAGCTCTGTG...GAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579732.5
CDS-3UTR CAA 90 bp GCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCGCTTAGGAGACGTCTTTaGGTAGCTCGCTTCTATAGG +
Preference number: 5 (lower is better)
Translates to: ACCPIEANHCCFFVWPFPLRRRL*VARFYR
Trigger: CCTATAGAAGCGAGCTACCAAAAGACGTCTCCTAAG...CGGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTCTTAGGAGACGTCTTTaGGTAGCTCGCTTCTATAGG +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVLRRRL*VARFYR
Trigger: CCTATAGAAGCGAGCTACCAAAAGACGTCTCCTAAG...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTACTGTGAGTTCACAGTaGTCCTCATCCCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVTVSSQ*SSSPFL
Trigger: AAGGAAAGGGGATGAGGACAACTGTGAACTCACAGT...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGGCCCAAGGTTGGCCTTaGGGGTCTGATAGCATTCAC +
Preference number: 5 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWAQGWP*GSDSIH
Trigger: GTGAATGCTATCAGACCCCAAAGGCCAACCTTGGGC...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTCACCATTCTCACTCTaGTCTGAAAGAAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVSPFSL*SERSPA
Trigger: AGCTGGGCTTCTTTCAGACAAGAGTGAGAATGGTGA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542342.6
CDS-3UTR CAA 90 bp CGACAAATGGCCTTGCTCCTGGAATCCATTGACAGCAGAGGCCTCCGAACAAACTGTGAAGAAAGAAGCTaGTTGTCCCATAGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: RQMALLLESIDSRGLRTNCEERS*LSHRSQ
Trigger: TTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACA...GTTTGTTCGGAGGCCTCTGCTGTCAATGGATTCCAGGAGCAAGGCCATTTGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTGCGCGACAAATGGCCTaGCTCCTGGAATCCATTGAC +
Preference number: 5 (lower is better)
Translates to: RSYVRRSRLASGLVRLILARQMA*LLESID
Trigger: GTCAATGGATTCCAGGAGCAAGGCCATTTGTCGCGC...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAAATGCCTAAGAAATTaGGAAAGCGCGACAAATGGC +
Preference number: 5 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDKCLRN*ESATNG
Trigger: GCCATTTGTCGCGCTTTCCAAATTTCTTAGGCATTT...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGTCATTGCTACCCCTGTaGGAGAAGCTATGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWSLLPL*EKLCKK
Trigger: CTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGA...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGCTTGTTGTCCCATAGAAGCCAACCACTGCTGTTTCTTCGTATGGCCTTTCCCAGGCCTTATCTGTGTTaGAAGTGGACAGGTCATTGC +
Preference number: 5 (lower is better)
Translates to: SLLSHRSQPLLFLRMAFPRPYLC*KWTGHC
Trigger: GCAATGACCTGTCCACTTCAAACACAGATAAGGCCT...GGGAAAGGCCATACGAAGAAACAGCAGTGGTTGGCTTCTATGGGACAACAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GATGGCAGGCCTTATCTGTGTTTGAAGTGGACAGGTCATTGCTACCCCTGTTGGGCAGGAGATTCACCCTaGGAAGCAATTGAATGTGTA +
Preference number: 5 (lower is better)
Translates to: DGRPYLCLKWTGHCYPCWAGDSP*EAIECV
Trigger: TACACATTCAATTGCTTCCAAGGGTGAATCTCCTGC...CCAACAGGGGTAGCAATGACCTGTCCACTTCAAACACAGATAAGGCCTGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATCACAGTTATGAGGTCTaGTCCATCAGAAAGCACAAT +
Preference number: 5 (lower is better)
Translates to: CFGRTYIDPAQGWPLGSDHSYEV*SIRKHN
Trigger: ATTGTGCTTTCTGATGGACAAGACCTCATAACTGTG...ATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CTGGCACTCTCAAAGGTAGCAGATGCCGTCTTTTCTATAGCCCCAAATCCAACTACACGTCCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LALSKVADAVFSIAPNPTTRPGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGGACGTGT...AGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS-3UTR CAA 90 bp ACATCCAGGATCATTAATGCTGCATTAGCTCCACTTCTTGCCACACTGGTGCTATCTGCAGCAAAGAGCTaGCCTGAAAGAAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TSRIINAALAPLLATLVLSAAKS*PERSPA
Trigger: AGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAGA...TAGCACCAGTGTGGCAAGAAGTGGAGCTAATGCAGCATTAATGATCCTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CAA 90 bp AATTTTGATCATCAGTGCTTCGGAAGAACGTACATAGACCCAGCCCAAGGTTGGAGACCCTCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: NFDHQCFGRTYIDPAQGWRPSGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGAGGGTCT...CCAACCTTGGGCTGGGTCTATGTACGTTCTTCCGAAGCACTGATGATCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTTGTGAAGAAAGAAGCTaGTTGTCCCATAGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVCEERS*LSHRSQ
Trigger: TTGGCTTCTATGGGACAACAAGCTTCTTTCTTCACA...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TCTGGGCTGGCTCGGCCTTGGAAGGTAGCTTGCTATCTTTATGATGCTCCAGTTCACAGTTATGAGGTCTaGTCCATCAGAAAGCACAAT +
Preference number: 5 (lower is better)
Translates to: SGLARPWKVACYLYDAPVHSYEV*SIRKHN
Trigger: ATTGTGCTTTCTGATGGACAAGACCTCATAACTGTG...AACTGGAGCATCATAAAGATAGCAAGCTACCTTCCAAGGCCGAGCCAGCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGGGTGATGAGAGTATTCAGGAATAGTGGTAGGTTGGGTACAGTGGCTTACACCGTCTCTACTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RVMRVFRNSGRLGTVAYTVSTGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGTAGAGAC...GGTGTAAGCCACTGTACCCAACCTACCACTATTCCTGAATACTCTCATCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CAA 90 bp TTAGCTCCACTTCTTGCCACACTGGTGCTATGTTTTGTCTTTCTGGACTGGCCATGGAAACCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LAPLLATLVLCFVFLDWPWKPGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGGTTTCCA...TGGCCAGTCCAGAAAGACAAAACATAGCACCAGTGTGGCAAGAAGTGGAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS-3UTR CAA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTGAAGTGGACAGGTCATaGCTACCCCTGTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPEVDRS*LPLLEK
Trigger: CTTCTCCAACAGGGGTAGCAATGACCTGTCCACTTC...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp GGAAGAACGTACATAGACCCAGCCCAAGGTTGGCCTTTGGGGTCTGATAGCATTAATGTGTCTTCAATTTaGATCATCAGTGCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: GRTYIDPAQGWPLGSDSINVSSI*IISASE
Trigger: TTCCGAAGCACTGATGATCAAAATTGAAGACACATT...AATGCTATCAGACCCCAAAGGCCAACCTTGGGCTGGGTCTATGTACGTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTAGACCCTCTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPRPSGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGAGGGTCT...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp AGAAGCTATGTAAGAAGGAGTAGGCTGGCTTCTGGTCTAGTTCGACTCATTCTTTCATTGCTACCCCTGTaGGAGAAGCTATGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: RSYVRRSRLASGLVRLILSLLPL*EKLCKK
Trigger: CTTCTTACATAGCTTCTCCAACAGGGGTAGCAATGA...AAGAATGAGTCGAACTAGACCAGAAGCCAGCCTACTCCTTCTTACATAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp TACTGCTCAAAGAGTGTGGGGTTTCTTTACAGGGTGATGAGAGTATTCAGGAATGTCTCTACTGGAACGTaGTGTATAGTGATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: YCSKSVGFLYRVMRVFRNVSTGT*CIVMAK
Trigger: CTTGGCCATCACTATACACAACGTTCCAGTAGAGAC...ATTCCTGAATACTCTCATCACCCTGTAAAGAAACCCCACACTCTTTGAGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS-3UTR CAA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACATTGAGTTCTAGCAGTTaGCTGGTGTCTCCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LKRESIQWPKQRICISMTLSSSS*LVSPSL
Trigger: GAGACTTGGAGACACCAGCAAACTGCTAGAACTCAA...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CCACAGCAGATTCCAAAACTCTTTCATTCACTTGAGTTAACTGAAATGGCTCCTGCAGGAGATTCACCCTaGGAAGCAATTGAATGTGTA +
Preference number: 5 (lower is better)
Translates to: PQQIPKLFHSLELTEMAPAGDSP*EAIECV
Trigger: TACACATTCAATTGCTTCCAAGGGTGAATCTCCTGC...AGGAGCCATTTCAGTTAACTCAAGTGAATGAAAGAGTTTTGGAATCTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS-3UTR CAA 90 bp CTGAAGAGAGAGTCCATTCAGTGGCCAAAACAAAGAATCTGTATTTCCATGACAAATGTGTCTTCAATTTaGATCATCAGTGCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: LKRESIQWPKQRICISMTNVSSI*IISASE
Trigger: TTCCGAAGCACTGATGATCAAAATTGAAGACACATT...TGTCATGGAAATACAGATTCTTTGTTTTGGCCACTGAATGGACTCTCTCTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255559.7
ENST00000542342.6
CDS GCA 72 bp CTCTCCAGCCCCCACTGCACTTCCATCAGCCCCCGCTaGCACTCTCTCGCCGGCTCCACTCCCGCAGTCACT +
Preference number: 6 (lower is better)
Translates to: LSSPHCTSISPR*HSLAGSTPAVT
Trigger: AGTGACTGCGGGAGTGGAGCCGGCGAGAGAGTGGCAGCGGGGGCTGATGGAAGTGCAGTGGGGGCTGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000579018.5
ENST00000583507.1
CDS GCA 72 bp GAGGGGCCTGGGAGCAGCTGGATTTGTAGCTGCCTCTaGTCCCAGGAATCCCGGGTACCCCCACACACCGCT +
Preference number: 6 (lower is better)
Translates to: EGPGSSWICSCL*SQESRVPPHTA
Trigger: AGCGGTGTGTGGGGGTACCCGGGATTCCTGGGAGCAGAGGCAGCTACAAATCCAGCTGCTCCCAGGCCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583507.1
CDS GCA 72 bp CTGCCCATACCAGAAAGCTCTCCAGGTGGAGAAGCCTaGCCCTCGCAAGGGAAGGCTGACAGCCAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LPIPESSPGGEA*PSQGKADSQAL
Trigger: GAGGGCCTGGCTGTCAGCCTTCCCTTGCGAGGGGCAGGCTTCTCCACCTGGAGAGCTTTCTGGTATGGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
ENST00000582769.5
CDS GCA 72 bp CAAAGGCACCAAAGACCCCGGCCAGGGGCTCCACCATaGCGCTCAGCTGCCCATACCAGAAAGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: QRHQRPRPGAPP*RSAAHTRKLSR
Trigger: CCTGGAGAGCTTTCTGGTATGGGCAGCTGAGCGGCATGGTGGAGCCCCTGGCCGGGGTCTTTGGTGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
CDS GCA 72 bp GCCGAAGTTCAGTGCCAGGGTCGTCTGGGGGTCTTCTaGTGCACCAGTTCCACATGGCTGGGGAGGCCTCAC +
Preference number: 6 (lower is better)
Translates to: AEVQCQGRLGVF*CTSSTWLGRPH
Trigger: GTGAGGCCTCCCCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS GCA 72 bp AAGTGGGAGGGGCCTGGGAGCAGCTGGATTTGTAGCTaGCTCTGCTCCCAGGAATCCCGGGTACCCCCACAC +
Preference number: 6 (lower is better)
Translates to: KWEGPGSSWICS*LCSQESRVPPH
Trigger: GTGTGGGGGTACCCGGGATTCCTGGGAGCAGAGGCAGCTACAAATCCAGCTGCTCCCAGGCCCCTCCCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583507.1
CDS CCA 72 bp TGGCACCGGCAGCAAAGGCCAGAGCGTAGGGCAGGATaGGCTCAGCCAGCACCACGGCAAAGGCACCAAAGA +
Preference number: 6 (lower is better)
Translates to: WHRQQRPERRAG*AQPAPRQRHQR
Trigger: TCTTTGGTGCCTTTGCCGTGGTGCTGGCTGAGCCCATCCTGCCCTACGCTCTGGCCTTTGCTGCCGGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
CDS CCA 72 bp GTCCGCGGACCACCCAACCCCCTTCCAAGCTCCAGGTaGCTGCCCTTCCAAGTCCCACACTCTTGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: VRGPPNPLPSSR*LPFQVPHSCPD
Trigger: ATCAGGACAAGAGTGTGGGACTTGGAAGGGCAGCCACCTGGAGCTTGGAAGGGGGTTGGGTGGTCCGCGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578620.1
CDS TCA 72 bp CTCCGAGGCCAGGCCTCACAGACGGGCCCCTTCTCATaGGGCAAGGATCACAGGTCATGGGATGTGACCACA +
Preference number: 6 (lower is better)
Translates to: LRGQASQTGPFS*GKDHRSWDVTT
Trigger: TGTGGTCACATCCCATGACCTGTGATCCTTGCCTCATGAGAAGGGGCCCGTCTGTGAGGCCTGGCCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS GCA 72 bp GAAGTTCAGTGCCAGGGTCGTCTGGGGGTCTTCTGCTaGACCAGTTCCACATGGCTGGGGAGGCCTCACAGT +
Preference number: 6 (lower is better)
Translates to: EVQCQGRLGVFC*TSSTWLGRPHS
Trigger: ACTGTGAGGCCTCCCCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS CCA 72 bp GGAAGAAGGCAAAGGCACCGAAGCCCCCAGAGGACGTaGCCATCTCAACTGCTGGGGCCAGAAGAGACCAAT +
Preference number: 6 (lower is better)
Translates to: GRRQRHRSPQRT*PSQLLGPEETN
Trigger: ATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGTGCCTTTGCCTTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS CCA 72 bp GTCTGGGGGTCTTCTGCTGCACCAGTTCCACATGGCTaGGGAGGCCTCACAGTCATGGCAGAAAGCGAAAGG +
Preference number: 6 (lower is better)
Translates to: VWGSSAAPVPHG*GGLTVMAESER
Trigger: CCTTTCGCTTTCTGCCATGACTGTGAGGCCTCCCCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579491.1
CDS CCA 72 bp GCTGGGGACGGATCTGCTCTTGGTCCAAGCACTCTCTaGCTCTCTCCTTTATCCCTGGGAGGTCACCATCCC +
Preference number: 6 (lower is better)
Translates to: AGDGSALGPSTL*LSPLSLGGHHP
Trigger: GGGATGGTGACCTCCCAGGGATAAAGGAGAGAGCCAGAGAGTGCTTGGACCAAGAGCAGATCCGTCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS CAA 90 bp CAGGCAGTGGCTGTCACGCTCACGGGCAAGACCTCACCTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: QAVAVTLTGKTSPGT*CIVMAKMSSAILLQ
Trigger: CTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGGTGAGGTCTTGCCCGTGAGCGTGACAGCCACTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579491.1
ENST00000633901.1
CDS TCA 72 bp CGAAGCGTCTCAGCCCTAGCCCAGGCCAACGTCCAGTaGCATCATCACTACAAATCCCAGGATGGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: RSVSALAQANVQ*HHHYKSQDGGP
Trigger: TGGGCCTCCATCCTGGGATTTGTAGTGATGATGTCACTGGACGTTGGCCTGGGCTAGGGCTGAGACGCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579988.1
CDS GCA 72 bp CCGCCTCTGTCCACTAGAGAATACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCCCCAGGTGAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: PPLSTREYEHES*PSCCHPPGEEG
Trigger: ACCTTCTTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGAGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579018.5
ENST00000579732.5
ENST00000580557.5
ENST00000581005.1
ENST00000583146.5
CDS CCA 72 bp ACCGAAGCCCCCAGAGGACGTGGCCATCTCAACTGCTaGGGCCAGAAGAGACCAATAGGAAGCTGCCAACAT +
Preference number: 6 (lower is better)
Translates to: TEAPRGRGHLNC*GQKRPIGSCQH
Trigger: ATGTTGGCAGCTTCCTATTGGTCTCTTCTGGCCCCAGCAGTTGAGATGGCCACGTCCTCTGGGGGCTTCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS CCA 72 bp ATCAACGTAGAGCCGAAGTTCAGTGCCAGGGTCGTCTaGGGGTCTTCTGCTGCACCAGTTCCACATGGCTGG +
Preference number: 6 (lower is better)
Translates to: INVEPKFSARVV*GSSAAPVPHGW
Trigger: CCAGCCATGTGGAACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS CCA 72 bp GGAGCATGCTGGATACAGCCCCTTCCAAGCTCCAGGTaGCTGCCCTTCCAAGTCCCACACTCTTGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: GACWIQPLPSSR*LPFQVPHSCPD
Trigger: ATCAGGACAAGAGTGTGGGACTTGGAAGGGCAGCCACCTGGAGCTTGGAAGGGGCTGTATCCAGCATGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580557.5
CDS TCA 72 bp CATTCCCCTGTGGGAGACCAAGCCATTGGTGTACACTaGGGGTCCAAACAGGTCCACCTTCTGGCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: HSPVGDQAIGVH*GSKQVHLLASR
Trigger: CCTGCTTGCCAGAAGGTGGACCTGTTTGGACCCTCAGTGTACACCAATGGCTTGGTCTCCCACAGGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS CCA 72 bp AAGGGAAGGCTGACAGCCAGGCCCTCGGGGAAATTCTaGATCCCGATTCCAATGGCCAAATTCCTGGCACTC +
Preference number: 6 (lower is better)
Translates to: KGRLTARPSGKF*IPIPMAKFLAL
Trigger: GAGTGCCAGGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000582769.5
CDS CCA 72 bp TTGGTCCAAGCACTCTCTGGCTCTCTCCTTTATCCCTaGGAGGTCACCATCCCAGGGAGGTCATCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: LVQALSGSLLYP*EVTIPGRSSQG
Trigger: ACCCTGAGATGACCTCCCTGGGATGGTGACCTCCCAGGGATAAAGGAGAGAGCCAGAGAGTGCTTGGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS TCA 72 bp CCAAAACTTCCAAGGTCAGGCCTAGGAAGTCAGGCCTaGGTGATGCTGGGGACGGATCTGCTCTTGGTCCAA +
Preference number: 6 (lower is better)
Translates to: PKLPRSGLGSQA*VMLGTDLLLVQ
Trigger: TTGGACCAAGAGCAGATCCGTCCCCAGCATCACTCAGGCCTGACTTCCTAGGCCTGACCTTGGAAGTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS GCA 72 bp CATGACCTGTCCACTAGAGAATACGAACACGAGAGCTaGCCCAGCTGCTGTCATCCCCCAGGTGAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: HDLSTREYEHES*PSCCHPPGEEG
Trigger: ACCTTCTTCACCTGGGGGATGACAGCAGCTGGGGCAGCTCTCGTGTTCGTATTCTCTAGTGGACAGGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582179.5
CDS CCA 72 bp CTCCACGAGGGGGAATCCAGCAGAAGGATTCAGGTCTaGGCGGAGAGGACTGTGGAAAAGTTCTCTAATGCC +
Preference number: 6 (lower is better)
Translates to: LHEGESSRRIQV*AERTVEKFSNA
Trigger: GGCATTAGAGAACTTTTCCACAGTCCTCTCCGCCCAGACCTGAATCCTTCTGCTGGATTCCCCCTCGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578620.1
ENST00000579018.5
ENST00000583507.1
CDS CAA 72 bp GCTGTCACGCTCACGGGCAAGACCTCACCTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATC +
Preference number: 6 (lower is better)
Translates to: AVTLTGKTSPGT*CIVMAKMSSAI
Trigger: GATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGGTGAGGTCTTGCCCGTGAGCGTGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579491.1
ENST00000633901.1
CDS TCA 72 bp ATTCATCCTACCACCAGCCCCCACGTCCATATTGCCTaGCTCAGCTCAGTGTCTGCAGCAAAGAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: IHPTTSPHVHIA*LSSVSAAKSLP
Trigger: AGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGCTGGTGGTAGGATGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS GCA 72 bp AGACTTCTTCTTCATCAACGTAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTCTTCTGCTGCACCCAA +
Preference number: 6 (lower is better)
Translates to: RLLLHQRRAEVQ*QGRLGVFCCTQ
Trigger: TTGGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000579732.5
ENST00000580557.5
ENST00000582179.5
ENST00000583146.5
CDS GCA 72 bp AGACTTCTTCTTCATCAACGTAGAGCCGAAGTTCAGTaGCAGGGTCGTCTGGGGGTCTTCTGCTGCACCAGT +
Preference number: 6 (lower is better)
Translates to: RLLLHQRRAEVQ*QGRLGVFCCTS
Trigger: ACTGGTGCAGCAGAAGACCCCCAGACGACCCTGGCACTGAACTTCGGCTCTACGTTGATGAAGAAGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579491.1
ENST00000582769.5
ENST00000584129.1
CDS GCA 72 bp TTGCCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTTaGCTGAAAGAAGCCCAGCTCTACCTATCCGGATGG +
Preference number: 6 (lower is better)
Translates to: LPDSAQCLQQRA*LKEAQLYLSGW
Trigger: CCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582179.5
ENST00000584129.1
CDS CCA 72 bp CCACCCCAGATGCTCAACAGAGCAACAGCATACACGTaGGCTCATGCGTCAAGACAAAGGCTGTTACTTCCC +
Preference number: 6 (lower is better)
Translates to: PPQMLNRATAYT*AHASRQRLLLP
Trigger: GGGAAGTAACAGCCTTTGTCTTGACGCATGAGCCCACGTGTATGCTGTTGCTCTGTTGAGCATCTGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS TCA 72 bp CTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTTGCCTaGAAGAAGCCCAGCTCTACCTATCCGGATGGAAAG +
Preference number: 6 (lower is better)
Translates to: LTQLSVCSKELA*KKPSSTYPDGK
Trigger: CTTTCCATCCGGATAGGTAGAGCTGGGCTTCTTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582179.5
ENST00000584129.1
CDS TCA 72 bp GTCCAAACAGGTCCACCTTCTGGCAAGCAGGTCTCCTaGTGTGCAAGCTGCAGCTGGAACGTTGTGTATAGT +
Preference number: 6 (lower is better)
Translates to: VQTGPPSGKQVS*CASCSWNVVYS
Trigger: ACTATACACAACGTTCCAGCTGCAGCTTGCACATCAGGAGACCTGCTTGCCAGAAGGTGGACCTGTTTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS TCA 72 bp AATTCTCCATCCAAAGTAGTGGAATCCCCACTCCACTaGCAGGGCCTGCATAGTCCTCTTCCCTGGGTCCAT +
Preference number: 6 (lower is better)
Translates to: NSPSKVVESPLH*QGLHSPLPWVH
Trigger: ATGGACCCAGGGAAGAGGACTATGCAGGCCCTGTCAGTGGAGTGGGGATTCCACTACTTTGGATGGAGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS GCA 72 bp CACTATTCATCCTACCACCAGCCCCCACGTCCATATTaGCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: HYSSYHQPPRPY*LTQLSVCSKEL
Trigger: AAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGCTGGTGGTAGGATGAATAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS GCA 72 bp GATGCTCAACAGAGCAACAGCATACACGTGGGCTCATaGGTCAAGACAAAGGCTGTTACTTCCCATCACGGC +
Preference number: 6 (lower is better)
Translates to: DAQQSNSIHVGS*VKTKAVTSHHG
Trigger: GCCGTGATGGGAAGTAACAGCCTTTGTCTTGACGCATGAGCCCACGTGTATGCTGTTGCTCTGTTGAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581005.1
CDS CCA 72 bp CCAGCAGAAGGATTCAGGTCTGGGCGGAGAGGACTGTaGAAAAGTTCTCTAATGCCTCGCTACTCAAAGCGT +
Preference number: 6 (lower is better)
Translates to: PAEGFRSGRRGL*KSSLMPRYSKR
Trigger: ACGCTTTGAGTAGCGAGGCATTAGAGAACTTTTCCACAGTCCTCTCCGCCCAGACCTGAATCCTTCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578620.1
ENST00000579018.5
ENST00000583507.1
CDS CCA 72 bp GGCAAGGATCACAGGTCATGGGATGTGACCACACTCTaGATACCCAGCCCTCTGGAATTCTCCATCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GKDHRSWDVTTL*IPSPLEFSIQS
Trigger: ACTTTGGATGGAGAATTCCAGAGGGCTGGGTATCCAGAGTGTGGTCACATCCCATGACCTGTGATCCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS CAA 72 bp TCACTATTCATCCTACCACCAGCCCCCACGTCCATATaGCCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCT +
Preference number: 6 (lower is better)
Translates to: SLFILPPAPTSI*PDSAQCLQQRA
Trigger: AGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGCTGGTGGTAGGATGAATAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS CAA 72 bp AGCAGGTCTCCTGATGTGCAAGCTGCAGCTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATC +
Preference number: 6 (lower is better)
Translates to: SRSPDVQAAAGT*CIVMAKMSSAI
Trigger: GATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGCTGCAGCTTGCACATCAGGAGACCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583715.5
CDS CAA 90 bp GCATTTCTCTCACTATTCATCCTACCACCAGCCCCCACGTCCATATaGCCTGACTCAGCTCAGTGTCTGCAGCAAAGAGCTTGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: AFLSLFILPPAPTSI*PDSAQCLQQRACLK
Trigger: TTTCAGGCAAGCTCTTTGCTGCAGACACTGAGCTGAGTCAGGCAATATGGACGTGGGGGCTGGTGGTAGGATGAATAGTGAGAGAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584129.1
CDS TCA 72 bp GTTGTTCCGCTTCCAAGAGTCAGTTCAAGAGGCTGGTaGAGTTGCAGAAGTGGAAACAGCACTAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: VVPLPRVSSRGW*SCRSGNSTRAA
Trigger: AGCAGCCCTAGTGCTGTTTCCACTTCTGCAACTTCACCAGCCTCTTGAACTGACTCTTGGAAGCGGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578620.1
ENST00000579018.5
ENST00000583507.1
CDS CCA 72 bp AAGGGAAGGCTGACAGCCAGGCCCTCGGGGAAATTCTaGATCCCGATTCCAATGGCCAAATTCATATATGGT +
Preference number: 6 (lower is better)
Translates to: KGRLTARPSGKF*IPIPMAKFIYG
Trigger: ACCATATATGAATTTGGCCATTGGAATCGGGATCCAGAATTTCCCCGAGGGCCTGGCTGTCAGCCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579988.1
CDS CAA 72 bp GGCCAACACAGCAACACCCTTGTCTCTACTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATC +
Preference number: 6 (lower is better)
Translates to: GQHSNTLVSTGT*CIVMAKMSSAI
Trigger: GATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGTAGAGACAAGGGTGTTGCTGTGTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579732.5
ENST00000633986.1
CDS CAA 72 bp TCATGGCAGAAGGTGAAGCAAACACGTCCTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATC +
Preference number: 6 (lower is better)
Translates to: SWQKVKQTRPGT*CIVMAKMSSAI
Trigger: GATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGGACGTGTTTGCTTCACCTTCTGCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS CAA 90 bp AACTTACAATCATGGCAGAAGGTGAAGCAAACACGTCCTGGAACGTaGTGTATAGTGATGGCCAAGATGAGCAGTGCGATCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: NLQSWQKVKQTRPGT*CIVMAKMSSAILLQ
Trigger: CTGGAGGAGGATCGCACTGCTCATCTTGGCCATCACTATACACAACGTTCCAGGACGTGTTTGCTTCACCTTCTGCCATGATTGTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579319.1
CDS GCA 72 bp AATGGCCAAATTCCTGGCACTCTCAAAGGTAGCAGATaGCGTCTTTTCTATAGCCCCAAATCCAACTCCAAC +
Preference number: 6 (lower is better)
Translates to: NGQIPGTLKGSR*RLFYSPKSNSN
Trigger: GTTGGAGTTGGATTTGGGGCTATAGAAAAGACGGCATCTGCTACCTTTGAGAGTGCCAGGAATTTGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255559.7
ENST00000542342.6
ENST00000582769.5
CDS CAA 72 bp CTGCAGATACACCTTCTGTACAAGCCGAACATAGATTaGGATAGCGACACACAGTCACCTTTCCTGGTCAAA +
Preference number: 6 (lower is better)
Translates to: LQIHLLYKPNID*DSDTQSPFLVK
Trigger: TTTGACCAGGAAAGGTGACTGTGTGTCGCTATCCAAATCTATGTTCGGCTTGTACAGAAGGTGTATCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579988.1
CDS GCA 72 bp CTGGAGAACAGACATCATTTCTTTCCCGTTAAACATTaGTCAATAATCCCAAATAGGGGGCACTGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LENRHHFFPVKH*SIIPNRGHCRA
Trigger: AGCTCTGCAGTGCCCCCTATTTGGGATTATTGAGCAATGTTTAACGGGAAAGAAATGATGTCTGTTCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579491.1