Pregenerated sensors for SLC38A8 (Homo sapiens)
Ensembl gene IDs: ENSG00000166558Ensembl transcript IDs: ENST00000299709.8, ENST00000568003.1, ENST00000568178.1, ENST00000569816.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTaGATACAGCAGCCACGTAGGGTCAGCCCCCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LYEEKKWHRSPG*IQQPRRVSPRR Trigger: CCTCCGGGGGCTGACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTGGTGAAGCGCTGGTCTaGGTACCACGGCTGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAGEALV*VPRLRG Trigger: GCCCCGCAGCCGTGGTACGCAGACCAGCGCTTCACC...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTGCTGCCGCCGTGCTCTaGCCAAAGATGAAGGTGCCG | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAAAAVL*PKMKVP Trigger: CGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGC...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTCCACTCCGCCCGCTTTaGAGAAGGCCCAGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAPLRPL*RRPRGS Trigger: ACTTCCCCTGGGCCTTCTCCAAAGCGGGCGGAGTGG...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTGGGCTCAGTGAAGGATaGGACTCACGCACGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAGLSEG*DSRTRP Trigger: GGGCCTCGTGCGTGAGTCCCATCCTTCACTGAGCCC...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGGCAGGGTGAAGCGCTaGTCTGCGTACCACGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IQQPRRVSPRRAPSCPALGRVKR*SAYHGC Trigger: GCAGCCGTGGTACGCAGACCAGCGCTTCACCCTGCC...TAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTCATCGGTCTCCTGGCTaGATACAGCAGCCACGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAHRSPG*IQQPRR Trigger: CCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATG...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTCACCCATTGCACAGATaGGGCACAAACCTGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: QQPRRVSPRRAPSCPALAHPLHR*GTNLGR Trigger: TCTTCCCAGGTTTGTGCCTCATCTGTGCAATGGGTG...AGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAATGGCATCGGTCTCCTaGCTGCATACAGCAGCCACG | + |
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Preference number: 4 (lower is better) Translates to: IQQPRRVSPRRAPSCPALMASVS*LHTAAT Trigger: CGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCAT...TAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCTCTGCGTACCACGGCTaGGGGGCGGGCGGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVSAYHG*GAGGVP Trigger: TGGCACCCCGCCCGCCCCGCAGCCGTGGTACGCAGA...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAAGCAAGATTCGAGCTTaGCCAGGGGTGAGTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IQQPRRVSPRRAPSCPALSKIRA*PGVSES Trigger: TGACTCACTCACCCCTGGCCAAGCTCGAATCTTGCT...TAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCAGGCCCAGGGGAAGTTaGGCAGGCCAGCTCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVRPRGS*AGQLPA Trigger: CGCTGGGAGCTGGCCTGCTCAACTTCCCCTGGGCCT...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | ATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACCCGGACCCACAGCCCTaGGGGGTCGGCCAGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: IFMRKRNGIGLLAAYSSHPDPQP*GVGQGA Trigger: AGCGCCCTGGCCGACCCCTCAGGGCTGTGGGTCCGG...GTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | ATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAAACAGGCAGCCAGAGTaGCTAGGATGCTTGTGTATT | + |
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Preference number: 4 (lower is better) Translates to: IQQPRRVSPRRAPSCPALNRQPE*LGCLCI Trigger: AATACACAAGCATCCTAGGCACTCTGGCTGCCTGTT...TAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGCGGAGGGCCCCTTCCTaGCCGGCACTAGCTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGRRAPS*PALAAH Trigger: ATGGGCAGCTAGTGCCGGGCAGGAAGGGGCCCTCCG...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGACCATATCATTGCCTaGGTAGGACATCAAGACGTC | + |
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Preference number: 4 (lower is better) Translates to: IQQPRRVSPRRAPSCPALDHIIA*VGHQDV Trigger: GACGTCTTGATGTCCTACCCAGGCAATGATATGGTC...TAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCGGAGGCAGGGCTCAGTaGAGGATGGGACTCACGCAC | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVGGRAQ*RMGLTH Trigger: GTGCGTGAGTCCCATCCTTCACTGAGCCCTGCCTCC...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTGGCGAGCGTCACGGTaGCCCACAGGATGGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGWRASR*PTGWSA Trigger: CGCTGACCATCCTGTGGGTCACCGTGACGCTCGCCA...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGCGGGGCGGGCGGGGTaGCAGACAGGAGGGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVAGRAG*QTGGSH Trigger: GTGACTCCCTCCTGTCTGGCACCCCGCCCGCCCCGC...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGGACACCAGGGCCCAGTaGGAGAGGCTCCGTTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGDTRAQ*ERLRLR Trigger: GCGCAAACGGAGCCTCTCCCACTGGGCCCTGGTGTC...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCCACAGCTTCTCCAGCTaGTCCCCGATCACCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVHSFSS*SPITLR Trigger: CCTCAGGGTGATCGGGGACCAGCTGGAGAAGCTGTG...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCAGGCCACACAGCCCCCTaGCCACACCCTGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLYEEKKWHRSPGCIQQPGHTAP*PHPGRW Trigger: CCACCTACCAGGGTGTGGTCAGGGGGCTGTGTGGCC...TGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCCTCCTCCAGAAGTCCTaGATCACTGACCTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVLLQKS*ITDLPR Trigger: CCTGGGGAGGTCAGTGATGCAGGACTTCTGGAGGAG...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCCTGCCCGGCACTAGCTaGCCATCAGAACATCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVLPGTS*PSEHLP Trigger: TGGGAGATGTTCTGATGGGCAGCTAGTGCCGGGCAG...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGAGCAGGGGCAGGGTaGAGCGCTGGTCTGCGTACC | + |
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Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYRAGAG*SAGLRT Trigger: GGTACGCAGACCAGCGCTTCACCCTGCCCCTGCTCT...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTACAGACAGGGGCAGGATaGCCAGCACGGAGAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVQTGAG*PARRAG Trigger: CCCTGCTCTCCGTGCTGGTCATCCTGCCCCTGTCTG...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGGGTCCCCGATCACCCTaGGGAAGGCCACGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: QHLYEEKKWHRSPGCIQQGPRSP*GRPRRS Trigger: TGATCTCCGTGGCCTTCCTCAGGGTGATCGGGGACC...CTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTACATCTCCCAGACCGCTaGCGCCGTGCTCTGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVHLPDR*RRALPK Trigger: TTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATG...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGAAGGCCCCTGCTTCCTaGGGTCTGTCCCTCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: QHLYEEKKWHRSPGCIQQKAPAS*GLSLHG Trigger: GCCATGGAGGGACAGACCCCAGGAAGCAGGGGCCTT...CTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACCATCGAGGACAGAGTaGCAGCAGCCGTGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HLYEEKKWHRSPGCIQQPPSRTE*QQPWQG Trigger: ACCCTGCCACGGCTGCTGCCACTCTGTCCTCGATGG...TGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCGCAGCACTTGACTCTTaGTCCTATAGGCTCGACACC | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVAALDS*SYRLDT Trigger: GGTGTCGAGCCTATAGGACCAAGAGTCAAGTGCTGC...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCAGAGTGGCAGCAGCCGTaGCAGGGTGAGGCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HLYEEKKWHRSPGCIQQPEWQQP*QGEAFL Trigger: CAGAAAAGCCTCACCCTGCCACGGCTGCTGCCACTC...TGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACGAAGTCCTGCATCACTaGCCTCCCCAGGAAGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYEVLHH*PPQEEH Trigger: GTGCTCTTCCTGGGGAGGTCAGTGATGCAGGACTTC...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGTGCTCTGCCCAAAGATaGAGGTGCCGACCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: QHLYEEKKWHRSPGCIQQCSAQR*RCRPAQ Trigger: CTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCA...CTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACTTTCTGGAAGGCCCCTaGTTCCTGGGGTCTGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IFMRKRNGIGLLAAYSSHFLEGP*FLGSVP Trigger: AGGGACAGACCCCAGGAAGCAGGGGCCTTCCAGAAA...GTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCGGCTCCGTTTGCGCATaGTGCAGTAGATGGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSGSVCA*CSRWRR Trigger: CCGTCTCCATCTACTGCAGCATGCGCAAACGGAGCC...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | ATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGGGAGAGGCTCCGTTTaGGCATGCTGCAGTAGATGG | + |
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Preference number: 4 (lower is better) Translates to: IFMRKRNGIGLLAAYSSHGRGSV*ACCSRW Trigger: CCATCTACTGCAGCATGCGCAAACGGAGCCTCTCCC...GTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACGAGGACAGCAACAAGTaGTCAGGGCCATGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYEDSNK*SGPWVP Trigger: TGGGACCCATGGCCCTGACCACTTGTTGCTGTCCTC...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACGTGCCGGACAGTCTTTaGCTGTTGGGGATGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYVPDSL*LLGMGL Trigger: GAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCAC...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCGGGTCTGTCCCTCCATaGCACCAAATCCAACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: EEKKWHRSPGCIQQPRRVGSVPP*HQIQLL Trigger: TAAAAGTTGGATTTGGTGCCATGGAGGGACAGACCC...GACCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACAGGGTGAGGCTTTTCTaGAAGGCCCCTGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IFMRKRNGIGLLAAYSSHRVRLF*KAPASW Trigger: CCAGGAAGCAGGGGCCTTCCAGAAAAGCCTCACCCT...GTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCTCCGTTTGCGCATGCTaGAGTAGATGGAGACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSSVCAC*SRWRRQ Trigger: CTGCCGTCTCCATCTACTGCAGCATGCGCAAACGGA...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTATTTGGCTGTTGGGGATaGGACTCGGGCTTACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVFGCWG*DSGLLQ Trigger: CTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAA...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCAGCATGCTGCAGTAGATaGAGACGGCAGCTTCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: HLYEEKKWHRSPGCIQQPACCSR*RRQLRD Trigger: GTCACGAAGCTGCCGTCTCCATCTACTGCAGCATGC...TGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACATAAACCCCCGTCAGTaGATAGATGAGGCAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYINPRQ*IDEAAG Trigger: GCCTGCTGCCTCATCTATTCACTGACGGGGGTTTAT...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCAGGCTCGACACCCATTaGACAGATGAGGCACAAACC | + |
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Preference number: 4 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSRLDTH*TDEAQT Trigger: GGTTTGTGCCTCATCTGTGCAATGGGTGTCGAGCCT...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCGGGCTTACTCCAGGTaGCTCAGTTGCATTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSRAYSR*LSCISW Trigger: CCAAGAAATGCAACTGAGCCACCTGGAGTAAGCCCG...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCAATGCTTGTGTATTTCTaGAAGGCGATCTCCCGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLYEEKKWHRSPGCIQQPMLVYF*KAISRG Trigger: CCCGCGGGAGATCGCCTTCCAGAAATACACAAGCAT...TGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACCCAGGAAGAGCACGATaGGGTAGACAGTTACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYPGRAR*GRQLRW Trigger: CCATCGTAACTGTCTACCCCATCGTGCTCTTCCTGG...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGTCTCCAGCATCTTTATaGGGAAAAGAAATGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGSPASL*GKEMAS Trigger: CGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGA...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGGATGAGGCACAAACCTaGGAAGATGAAGATGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGDEAQT*EDEDEE Trigger: TTCTTCATCTTCATCTTCCCAGGTTTGTGCCTCATC...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CCA 90 bp | ATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGGTAGACAGTTACGATaGAGACAGCAAAAAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: IFMRKRNGIGLLAAYSSHGRQLR*RQQKGP Trigger: GGGTCCTTTTTGCTGTCTCCATCGTAACTGTCTACC...GTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACATCCAACTTTTAAGGTaGCGGACAGTCTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYIQLLR*RTVFGC Trigger: ACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGAT...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS GCA 90 bp | TGCATACAGCAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTaGCCGGCACTAGCTGCCCATCAGAACATCTCCCAGACCGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CIQQPRRVSPRRAPS*PALAAHQNISQTAA Trigger: GGCAGCGGTCTGGGAGATGTTCTGATGGGCAGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTGCTGTATGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 90 bp | AGAAGAGCGCGGCGTCCGCGCTTCCCCAAAAGGGAATTCTGGCTTTaGACCCGGCAGGCAGGAGAGCGGAACATCCGACACCAGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRARRPRFPKREFWL*TRQAGERNIRHQAR Trigger: CCTTGCCTGGTGTCGGATGTTCCGCTCTCCTGCCTGCCGGGTGCAAAGCCAGAATTCCCTTTTGGGGAAGCGCGGACGCCGCGCTCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569816.1 |
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| CDS TCA 90 bp | ATCAGAACATCTCCCAGACCGCTGCCGCCGTGCTCTGCCCAAAGATaGAGGTGCCGACCAGCACAGAGACCACTCCCCAGACCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRTSPRPLPPCSAQR*RCRPAQRPLPRPPG Trigger: GCCTGGAGGTCTGGGGAGTGGTCTCTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATGTTCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 90 bp | CTAGCTGCCCATCAGAACATCTCCCAGACCGCTGCCGCCGTGCTCTaGCCAAAGATGAAGGTGCCGACCAGCACAGAGACCACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAAHQNISQTAAAVL*PKMKVPTSTETTPQ Trigger: CTGGGGAGTGGTCTCTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATGTTCTGATGGGCAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 90 bp | TTCCTGCCCGGCACTAGCTGCCCATCAGAACATCTCCCAGACCGCTaGCGCCGTGCTCTGCCCAAAGATGAAGGTGCCGACCAGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPGTSCPSEHLPDR*RRALPKDEGADQHR Trigger: TCTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATGTTCTGATGGGCAGCTAGTGCCGGGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS CCA 90 bp | CCAGGGCCCAGTGGGAGAGGCTCCGTTTGCGCATGCTGCAGTAGATaGAGACGGCAGCTTCGTGACACTGAAACCCGAAGCAGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPSGRGSVCACCSR*RRQLRDTETRSRWW Trigger: CCACCATCTGCTTCGGGTTTCAGTGTCACGAAGCTGCCGTCTCCATCTACTGCAGCATGCGCAAACGGAGCCTCTCCCACTGGGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568178.1 |
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| CDS-3UTR CAA 90 bp | ATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGGGGGTGCCGGACAGTCTTaGGCTGTTGGGGATGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: MRKRNGIGLLAAYSSHVGGAGQS*AVGDGT Trigger: AGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACC...CCCTACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CCA 90 bp | CCCTCCATGGCACCAAATCCAACTTTTAAGGTGCCGGACAGTCTTTaGCTGTTGGGGATGGGACTCGGGCTTACTCCAGGTGGCTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSMAPNPTFKVPDSL*LLGMGLGLTPGGSV Trigger: AACTGAGCCACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGATTTGGTGCCATGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACCTCCAGGTGGCTCAGTaGCATTTCTTGGGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSIFMRKRNGIGLLAAYLQVAQ*HFLGPE Trigger: CTCTGGCCCCAAGAAATGCAACTGAGCCACCTGGAG...GTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CAA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCGACAGTCTTTGGCTGTaGGGGATGGGACTCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSDSLWL*GMGLGL Trigger: AAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTC...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CAA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGAGATCATGAGCAGGTaGAGGAGGAAGCAGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVEIMSR*RRKQAS Trigger: TGAGGCCTGCTTCCTCCTCAACCTGCTCATGATCTC...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CAA 90 bp | AGCATCTTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCACCTCCAGGCAGCACTaGACTCTTGGTCCTATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SIFMRKRNGIGLLAAYSSTSRQH*TLGPIG Trigger: GCCTATAGGACCAAGAGTCAAGTGCTGCCTGGAGGT...GCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CCA 90 bp | GACAGCAAAAAGGACCCGGGCCACAATGATGACCATATCATTGCCTaGGTAGGACATCAAGACGTCAGCAGAAACTTCTGTCCCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSKKDPGHNDDHIIA*VGHQDVSRNFCPKS Trigger: ACTTTTGGGACAGAAGTTTCTGCTGACGTCTTGATGTCCTACCCAGGCAATGATATGGTCATCATTGTGGCCCGGGTCCTTTTTGCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS-3UTR CAA 90 bp | TTTATGAGGAAAAGAAATGGCATCGGTCTCCTGGCTGCATACAGCAGCCACGTAGAGTGCCTAGGATGCTaGTGTATTTCTGGAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FMRKRNGIGLLAAYSSHVECLGC*CISGRR Trigger: TCGCCTTCCAGAAATACACAAGCATCCTAGGCACTC...TACGTGGCTGCTGTATGCAGCCAGGAGACCGATGCCATTTCTTTTCCTCATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS TCA 72 bp | CCACAGGATGGTCAGCGGCATCCGGACCCACAGCCCTaGGGGGTCGGCCAGGGCGCTGGGCCCCCATCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQDGQRHPDPQP*GVGQGAGPPSP Trigger: GGGGGATGGGGGCCCAGCGCCCTGGCCGACCCCTCAGGGCTGTGGGTCCGGATGCCGCTGACCATCCTGTGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 72 bp | CAGCCCCCGGAGGGCCCCTTCCTGCCCGGCACTAGCTaGCCATCAGAACATCTCCCAGACCGCTGCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: QPPEGPFLPGTS*PSEHLPDRCRR Trigger: ACGGCGGCAGCGGTCTGGGAGATGTTCTGATGGGCAGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 72 bp | GCTGGTCTGCGTACCACGGCTGCGGGGCGGGCGGGGTaGCAGACAGGAGGGAGTCACACAGCTTCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGLRTTAAGRAG*QTGGSHTASPA Trigger: AGCTGGAGAAGCTGTGTGACTCCCTCCTGTCTGGCACCCCGCCCGCCCCGCAGCCGTGGTACGCAGACCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000299709.8 ENST00000568178.1 ENST00000569816.1 |
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| CDS GCA 72 bp | CAGCCACGTAGGGTCAGCCCCCGGAGGGCCCCTTCCTaGCCGGCACTAGCTGCCCATCAGAACATCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPRRVSPRRAPS*PALAAHQNISQ Trigger: CTGGGAGATGTTCTGATGGGCAGCTAGTGCCGGGCAGGAAGGGGCCCTCCGGGGGCTGACCCTACGTGGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS TCA 72 bp | TCTCCCAGACCGCTGCCGCCGTGCTCTGCCCAAAGATaGAGGTGCCGACCAGCACAGAGACCACTCCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPRPLPPCSAQR*RCRPAQRPLPR Trigger: TCTGGGGAGTGGTCTCTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 72 bp | CGGCGTCCGCGCTTCCCCAAAAGGGAATTCTGGCTTTaGACCCGGCAGGCAGGAGAGCGGAACATCCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: RRPRFPKREFWL*TRQAGERNIRH Trigger: GTGTCGGATGTTCCGCTCTCCTGCCTGCCGGGTGCAAAGCCAGAATTCCCTTTTGGGGAAGCGCGGACGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569816.1 |
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| CDS CCA 72 bp | AGAGCGCGGCGTCCGCGCTTCCCCAAAAGGGAATTCTaGCTTTGCACCCGGCAGGCAGGAGAGCGGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: RARRPRFPKREF*LCTRQAGERNI Trigger: GATGTTCCGCTCTCCTGCCTGCCGGGTGCAAAGCCAGAATTCCCTTTTGGGGAAGCGCGGACGCCGCGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569816.1 |
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| CDS CAA 90 bp | AAGGCAGGGACCACTCCGCCCGCTTTGGAGAAGGCCCAGGGGAAGTaGAGCAGGCCAGCTCCCAGCGCGGACTTCATGAGGATGAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: KAGTTPPALEKAQGK*SRPAPSADFMRMKT Trigger: TGTCTTCATCCTCATGAAGTCCGCGCTGGGAGCTGGCCTGCTCAACTTCCCCTGGGCCTTCTCCAAAGCGGGCGGAGTGGTCCCTGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568178.1 |
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| CDS GCA 72 bp | GGCACTAGCTGCCCATCAGAACATCTCCCAGACCGCTaGCGCCGTGCTCTGCCCAAAGATGAAGGTGCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTSCPSEHLPDR*RRALPKDEGAD Trigger: GTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATGTTCTGATGGGCAGCTAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS GCA 72 bp | CCAGGGCCCAGTGGGAGAGGCTCCGTTTGCGCATGCTaGAGTAGATGGAGACGGCAGCTTCGTGACACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGPSGRGSVCAC*SRWRRQLRDTE Trigger: TTCAGTGTCACGAAGCTGCCGTCTCCATCTACTGCAGCATGCGCAAACGGAGCCTCTCCCACTGGGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568178.1 |
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| CDS GCA 72 bp | CATCAGAACATCTCCCAGACCGCTGCCGCCGTGCTCTaGCCAAAGATGAAGGTGCCGACCAGCACAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HQNISQTAAAVL*PKMKVPTSTET Trigger: GGTCTCTGTGCTGGTCGGCACCTTCATCTTTGGGCAGAGCACGGCGGCAGCGGTCTGGGAGATGTTCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
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| CDS CCA 72 bp | AGTGGGAGAGGCTCCGTTTGCGCATGCTGCAGTAGATaGAGACGGCAGCTTCGTGACACTGAAACCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRGSVCACCSR*RRQLRDTETRS Trigger: GCTTCGGGTTTCAGTGTCACGAAGCTGCCGTCTCCATCTACTGCAGCATGCGCAAACGGAGCCTCTCCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568178.1 |
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| CDS CAA 72 bp | GACTCGGGCTTACTCCAGGTGGCTCAGTTGCATTTCTaGGGGCCAGAGGGGTGGGAGAAGCAAGATTCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DSGLLQVAQLHF*GPEGWEKQDSS Trigger: GCTCGAATCTTGCTTCTCCCACCCCTCTGGCCCCAAGAAATGCAACTGAGCCACCTGGAGTAAGCCCGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CCA 72 bp | CTGTCCCTCCATGGTTTTAAGGTGCCGGACAGTCTTTaGCTGTTGGGGATGGGACTCGGGCTTACTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLHGFKVPDSL*LLGMGLGLTPG Trigger: ACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAACCATGGAGGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568178.1 |
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| CDS CAA 72 bp | CTCCATGGTTTTAAGGTGCCGGACAGTCTTTGGCTGTaGGGGATGGGACTCGGGCTTACTCCAGGTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHGFKVPDSLWL*GMGLGLTPGGS Trigger: TGAGCCACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAACCATGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568178.1 |
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| CDS CAA 90 bp | GGTCTGTCCCTCCATGGTTTTAAGGTGCCGGACAGTCTTTGGCTGTaGGGGATGGGACTCGGGCTTACTCCAGGTGGCTCAGTTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: GLSLHGFKVPDSLWL*GMGLGLTPGGSVAF Trigger: AAATGCAACTGAGCCACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAACCATGGAGGGACAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568178.1 |
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| CDS GCA 72 bp | TCTGTCCCTCCATGGCACCAAATCCAACTTTTAAGGTaGCGGACAGTCTTTGGCTGTTGGGGATGGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SVPPWHQIQLLR*RTVFGCWGWDS Trigger: CGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGATTTGGTGCCATGGAGGGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CCA 72 bp | GCACCAAATCCAACTTTTAAGGTGCCGGACAGTCTTTaGCTGTTGGGGATGGGACTCGGGCTTACTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: APNPTFKVPDSL*LLGMGLGLTPG Trigger: ACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGATTTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CAA 72 bp | AATCCAACTTTTAAGGTGCCGGACAGTCTTTGGCTGTaGGGGATGGGACTCGGGCTTACTCCAGGTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NPTFKVPDSLWL*GMGLGLTPGGS Trigger: TGAGCCACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CCA 72 bp | AGTCCTGCATCACTGACCTCCCCAGGAAGAGCACGATaGGGTAGACAGTTACGATGGAGACAGCAAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPASLTSPGRAR*GRQLRWRQQKG Trigger: TCCTTTTTGCTGTCTCCATCGTAACTGTCTACCCCATCGTGCTCTTCCTGGGGAGGTCAGTGATGCAGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS CAA 90 bp | ATGGCACCAAATCCAACTTTTAAGGTGCCGGACAGTCTTTGGCTGTaGGGGATGGGACTCGGGCTTACTCCAGGTGGCTCAGTTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: MAPNPTFKVPDSLWL*GMGLGLTPGGSVAF Trigger: AAATGCAACTGAGCCACCTGGAGTAAGCCCGAGTCCCATCCCCAACAGCCAAAGACTGTCCGGCACCTTAAAAGTTGGATTTGGTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS GCA 72 bp | GCACTTGACTCTTGGTCCTATAGGCTCGACACCCATTaGACAGATGAGGCACAAACCTGGGAAGATGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ALDSWSYRLDTH*TDEAQTWEDED Trigger: ATCTTCATCTTCCCAGGTTTGTGCCTCATCTGTGCAATGGGTGTCGAGCCTATAGGACCAAGAGTCAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299709.8 ENST00000568003.1 |
||
| CDS CCA 72 bp | AAGGACCCGGGCCACAATGATGACCATATCATTGCCTaGGTAGGACATCAAGACGTCAGCAGAAACTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KDPGHNDDHIIA*VGHQDVSRNFC Trigger: ACAGAAGTTTCTGCTGACGTCTTGATGTCCTACCCAGGCAATGATATGGTCATCATTGTGGCCCGGGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299709.8 |
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| CDS GCA 72 bp | GAGTGTGGGAGTGTCACACCAGTTTTAGGCTCAATCTaGACACAGGAGTCGAGCTTTGTTTTTGTGTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: ECGSVTPVLGSI*TQESSFVFVCL Trigger: TAAACACACAAAAACAAAGCTCGACTCCTGTGTGCAGATTGAGCCTAAAACTGGTGTGACACTCCCACACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000569816.1 |
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