RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC38A7 (Homo sapiens)

Ensembl gene IDs: ENSG00000103042

Ensembl transcript IDs: ENST00000219320.9, ENST00000562149.5, ENST00000562397.5, ENST00000563196.5, ENST00000564010.5, ENST00000564100.5, ENST00000564391.1, ENST00000564720.5, ENST00000564964.1, ENST00000565785.5, ENST00000566598.5, ENST00000566953.5, ENST00000567930.1, ENST00000569209.1, ENST00000570101.5, ENST00000570214.5

Found 697 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATCTGGGGACTGGACAGAGGCCCAGCCAGCCTCCAACCAGCTTCTaGTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGGCAGG +
Preference number: 1 (lower is better)
Translates to: HLGTGQRPSQPPTSF*FLDRTALSGGRLGR
Trigger: CCTGCCGAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGGCTGGCTGGGCCTCTGTCCAGTCCCCAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 90 bp CCCTGGGAAGACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTCAGGGATGAAGAGCGCCAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: PWEDEDEAGGQASND*DHLADVRDEERQQQ
Trigger: CTGCTGCTGGCGCTCTTCATCCCTGACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTCTTCCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR TCA 90 bp GGCCAGATTCCAGCTCCTTCTCCTGACTGGTCTGTCTCTGTGCAATaGCTCCACTTACATCCCTTGACCCCCGAAACACGGCACTGGGGG +
Preference number: 1 (lower is better)
Translates to: GQIPAPSPDWSVSVQ*LHLHPLTPETRHWG
Trigger: CCCCCAGTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGACCAGTCAGGAGAAGGAGCTGGAATCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CCA 90 bp TCTCTTCGCCCTCTCTGGGGTAACAATTCCAGTGTGACATCAATGTaGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: SLRPLWGNNSSVTSM*LATEARPDGRALLR
Trigger: CCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACATTGATGTCACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR GCA 90 bp GCGACCAATGGCAAAGGCCTTGTGTTCCCTGGGAGGCAGTGGTTATaGCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAA +
Preference number: 1 (lower is better)
Translates to: ATNGKGLVFPGRQWL*QEIHKDGVGCGLAE
Trigger: TTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR CCA 90 bp GATCAGGCACCAAGAGGGGATGTGAGAAAAGGCAGTTTATCCATCTaGGGACTGGACAGAGGCCCAGCCAGCCTCCAACCAGCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: DQAPRGDVRKGSLSI*GLDRGPASLQPASA
Trigger: AGCAGAAGCTGGTTGGAGGCTGGCTGGGCCTCTGTCCAGTCCCCAGATGGATAAACTGCCTTTTCTCACATCCCCTCTTGGTGCCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 90 bp GAGATAGCCTATCTCTTCGCCCTCTCTGGGGTAACAATTCCAGTGTaGCATCAATGTGGCTGGCCACTGAGGCCAGGCCTGATGGACGTG +
Preference number: 1 (lower is better)
Translates to: EIAYLFALSGVTIPV*HQCGWPLRPGLMDV
Trigger: CACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACATTGATGTCACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGATAGGCTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CCA 90 bp GTTCCTGCGACCAATGGCAAAGGCCTTGTGTTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTG +
Preference number: 1 (lower is better)
Translates to: VPATNGKGLVFPGRQ*LCQEIHKDGVGCGL
Trigger: CAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGGTCGCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR CCA 90 bp AGGGATGCCCAGCCTGGACCATCAGGTTTGATGAAAGAGACAGGGTaGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAG +
Preference number: 1 (lower is better)
Translates to: RDAQPGPSGLMKETG*GPSRPGKCLLAMGK
Trigger: CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGGCTGGGCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 90 bp TGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGTCTGAATCTACCTaGCTATGCATTTGCATGACTTCAGTGCTACCGTTGGAAGTGGCC +
Preference number: 1 (lower is better)
Translates to: WWGLPRKVWTRSEST*LCICMTSVLPLEVA
Trigger: GGCCACTTCCAACGGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAACCCCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 90 bp AAGAGGGGCCCATCTCAGACACAAAAGCAGATACTCCCAACCTTATaGGGAAAGCTAACGGAGGAATACTCACAGCACCGTGGCACGGGA +
Preference number: 1 (lower is better)
Translates to: KRGPSQTQKQILPTL*GKLTEEYSQHRGTG
Trigger: TCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGGGCCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 90 bp CAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTC +
Preference number: 1 (lower is better)
Translates to: QSLEEDVRMSSHQLE*SWTKNGPIALRDGF
Trigger: GAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGTCCACGATCATTCCAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 90 bp GACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGTCTaGATCTACCTGACTATGCATTTGCATGACTTCAGTGCTACCGTT +
Preference number: 1 (lower is better)
Translates to: DRFMVGVAQEGVDKV*IYLTMHLHDFSATV
Trigger: AACGGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 90 bp ACCATCAGGTTTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATG +
Preference number: 1 (lower is better)
Translates to: TIRFDERDRVGPLKA*EMSISYGKEADRFM
Trigger: CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAAACCTGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 90 bp TCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCTTTCTTATaGGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGA +
Preference number: 1 (lower is better)
Translates to: SIVILQREVRLDSFL*DLPTLFTRGFQAWR
Trigger: TCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCGCACGGGACGGCCCTTaGCTTCAGAGCCGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCARDGP*LQSRAG
Trigger: GCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGC...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR GCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACCGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNRHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR GCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTCGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSRHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR GCA 90 bp ATGTGGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGGAGGAGGAGAGGGATaGCCAGCCTGGACCATCAGG +
Preference number: 2 (lower is better)
Translates to: MWLATEARPDGRALLRRLGGGEG*PAWTIR
Trigger: CCTGATGGTCCAGGCTGGGCATCCCTCTCCTCCTCC...CAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR GCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCCTTCTTAGATCGGACTaGCCTGAGTGGCGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCLLRSD*PEWRAA
Trigger: AGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAG...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCAGGGTCCTCTATGATGTaGGACTTCCTGCCGCCATCC +
Preference number: 2 (lower is better)
Translates to: EARPDGRALLRRLVREPPGSSMM*DFLPPS
Trigger: GGATGGCGGCAGGAAGTCTCACATCATAGAGGACCC...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCAAGTGGCCAGGCTCCTaGGGAAGCTACCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLKWPGS*GSYHWP
Trigger: AGGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTT...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCCTATGGGAAAGAGGCTaGCAGGTTCATGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: LTPETRHWGTAALLTRLSLWERG*QVHGGG
Trigger: ACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAG...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp GGCTCCCAGGGTGACCAAGAGGACTCCGTAGCTGACCAGCACCCACCAGCTGGCCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTC +
Preference number: 2 (lower is better)
Translates to: GSQGDQEDSVADQHPPAGQASND*DHLADV
Trigger: GACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTG...GCCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCTTGGTCACCCTGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR GCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 2 (lower is better)
Translates to: KKVSGRYTLILTSPAHTERHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 2 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCAGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: EARPDGRALLRRLVREPPGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGAAGCTACCACTGGCCTaGGGTAATGAGCACAACCCC +
Preference number: 2 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWKLPLA*GNEHNP
Trigger: GGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLRRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGTCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 2 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR TCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGGGTCCTCTATGATGTaGGACTTCCTGCCGCCATCC +
Preference number: 2 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEGSSMM*DFLPPS
Trigger: GGATGGCGGCAGGAAGTCTCACATCATAGAGGACCC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR GCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGGCAGGCTCAAATGCTaGCCATCAGTGACAACCCAG +
Preference number: 2 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLGRLKC*PSVTTQ
Trigger: CTGGGTTGTCACTGATGGGCAGCATTTGAGCCTGCC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR GCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACTCAGGAAGCCACAGATaGCTTCCCCATTTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHSGSHR*LPHFRL
Trigger: CAGCCTAAAATGGGGAAGGCATCTGTGGCTTCCTGA...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565785.5
3UTR-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 2 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTAT +
Preference number: 2 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNGPLKA*EMSISY
Trigger: ATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCC...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCTCTCTTCGCCCTCTCTaGGGTAACAATTCCAGTGTG +
Preference number: 2 (lower is better)
Translates to: LTPETRHWGTAALLTRLSSLRPL*GNNSSV
Trigger: CACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGA...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCATCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 2 (lower is better)
Translates to: EARPDGRALLRRLVREPPSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGAAGGGGACTGGATTTaGGCTGTCCAGAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTREGDWI*AVQRCG
Trigger: CCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACGGTGTGGACAAGGTCTaGATCTACCTGACTATGCAT +
Preference number: 2 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNGVDKV*IYLTMH
Trigger: ATGCATAGTCAGGTAGATTCAGACCTTGTCCACACC...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR GCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCTACTCAGGACAGGGTaGTCTGTGGAGGATGGTGGC +
Preference number: 2 (lower is better)
Translates to: KKVSGRYTLILTSPAHTELLRTG*SVEDGG
Trigger: GCCACCATCCTCCACAGAGCACCCTGTCCTGAGTAG...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR GCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCAGGAAGTCTGATTGGTaGCTGGGATTGGCCAAAGTG +
Preference number: 2 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCRKSDW*LGLAKV
Trigger: CACTTTGGCCAATCCCAGGCACCAATCAGACTTCCT...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 2 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTAGGCTGACAGGTTCATaGTGGGGGTTGCCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPRLTGS*WGLPRK
Trigger: CTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCT...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCAGGAGGAAGTCTGATTaGTGCCTGGGATTGGCCAAA +
Preference number: 2 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCRRKSD*CLGLAK
Trigger: TTTGGCCAATCCCAGGCACCAATCAGACTTCCTCCT...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CAA 90 bp TCCCTGGGAGGCAGTGGTTATGCCAAGAGATCCACAAAGATGGCGTaGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCAAG +
Preference number: 2 (lower is better)
Translates to: SLGGSGYAKRSTKMA*AVVWPKMKAPRVTK
Trigger: CTTGGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR TCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGAAGGGGACTGGATTTaGGCTGTCCAGAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGEGDWI*AVQRCG
Trigger: CCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRRRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 2 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 2 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 2 (lower is better)
Translates to: KKVSGRYTLILTSPAHTEVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAGACTCTCTTCACCCGTaGATTCCAGGCATGGAGAAG +
Preference number: 2 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRDSLHP*IPGMEK
Trigger: CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTC...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTCTCTGTGGAGGATGGTaGCCTTCTGTCCATAGTCAT +
Preference number: 2 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSLCGGW*PSVHSH
Trigger: ATGACTATGGACAGAAGGCCACCATCCTCCACAGAG...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCAGGGCAGCTGAGGGGCTaGGGTGGTCAAAACGGGAAT +
Preference number: 2 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTAGQLRG*GGQNGN
Trigger: ATTCCCGTTTTGACCACCTCAGCCCCTCAGCTGCCC...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp ACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCACCAGCTGGCTGGTTTaGCCTCTTCCATCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: TKMALAVVWPKMKAPRVTTSWLV*PLPSQR
Trigger: TCTCTGAGATGGAAGAGGTCAAACCAGCCAGCTGGT...GGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CCA 90 bp AGGCACAGCCCTGGGAAGACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTCATAGCTCTAAGAGATaGGTTCCTGCGACCAATGGC +
Preference number: 2 (lower is better)
Translates to: RHSPGKTKMKQAARPPMTHSSKR*VPATNG
Trigger: GCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATG...AGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTCTTCCCAGGGCTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR TCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCAAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 2 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTARRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCACTGGATTCTTTCTTATaGGATCTACCGACTCTCTTC +
Preference number: 2 (lower is better)
Translates to: EARPDGRALLRRLVREPPLDSFL*DLPTLF
Trigger: GAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAG...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTAAGTGGCCAGGCTCCTaGGGAAGCTACCACTGGCCT +
Preference number: 2 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAKWPGS*GSYHWP
Trigger: AGGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTT...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 2 (lower is better)
Translates to: SERFSAFSITHPAASEKRVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAAGCTACCACTGGCCTaGGGTAATGAGCACAACCCC +
Preference number: 2 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKKLPLA*GNEHNP
Trigger: GGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTT...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCACTATGGGAAAGAGGCTaGCAGGTTCATGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTALWERG*QVHGGG
Trigger: ACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAG...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR TCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCGGCCAGGCCTCCAATaGCTGAGATCACCTTGCCGA +
Preference number: 2 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKRPGLQ*LRSPCR
Trigger: TCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR TCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGAGAGTTTGGCTTGAATaGGGCACAGCCCTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVRVWLE*GTALGR
Trigger: TCTTCCCAGGGCTGTGCCTCATTCAAGCCAAACTCT...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGACATAGCTCTAAGAGATaGGTTCCTGCGACCAATGGC +
Preference number: 2 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRHSSKR*VPATNG
Trigger: GCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATG...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGACTCTCTTCACCCGTaGATTCCAGGCATGGAGAAG +
Preference number: 2 (lower is better)
Translates to: SERFSAFSITHPAASEKRDSLHP*IPGMEK
Trigger: CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 2 (lower is better)
Translates to: SERFSAFSITHPAASEKRVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGAGGGATGCCCAGCCTaGACCATCAGGTTTGATGAA +
Preference number: 2 (lower is better)
Translates to: SERFSAFSITHPAASEKREGCPA*TIRFDE
Trigger: TTCATCAAACCTGATGGTCCAGGCTGGGCATCCCTC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp ATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTAATGAGGCACAGCCCTaGGAAGACGAAGATGAAGCA +
Preference number: 2 (lower is better)
Translates to: IHKDGVGCGLAEDEGSQGNEAQP*EDEDEA
Trigger: TGCTTCATCTTCGTCTTCCCAGGGCTGTGCCTCATT...ACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR CAA 90 bp CCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGTGGTTATGCCAAGAGATCCACAAAG +
Preference number: 2 (lower is better)
Translates to: PIALRDGFLRPMAKA*CSLGGSGYAKRSTK
Trigger: CTTTGTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR TCA 90 bp TTATGCCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 2 (lower is better)
Translates to: LCQEIHKDGVGCGLAEDERQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...TTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 2 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTAT +
Preference number: 2 (lower is better)
Translates to: SERFSAFSITHPAASEKRGPLKA*EMSISY
Trigger: ATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAATCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 2 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR GCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGTTCATGGTGGGGGTTaGCCAGGAAGGTGTGGACAA +
Preference number: 2 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKVHGGG*PGRCGQ
Trigger: TTGTCCACACCTTCCTGGGCAACCCCCACCATGAAC...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGCTGACAGGTTCATGGTaGGGGTTGCCCAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELTGSW*GLPRKV
Trigger: CACCTTCCTGGGCAACCCCCACCATGAACCTGTCAG...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCATGTCATCCCACCAGTTaGAATGATCGTGGACTAAGA +
Preference number: 2 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTACHPTS*NDRGLR
Trigger: TCTTAGTCCACGATCATTCCAACTGGTGGGATGACA...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCTCTGTGGAGGATGGTaGCCTTCTGTCCATAGTCAT +
Preference number: 2 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKLCGGW*PSVHSH
Trigger: ATGACTATGGACAGAAGGCCACCATCCTCCACAGAG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAGGGATGCCCAGCCTaGACCATCAGGTTTGATGAA +
Preference number: 2 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEEGCPA*TIRFDE
Trigger: TTCATCAAACCTGATGGTCCAGGCTGGGCATCCCTC...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGATGTCATCCCACCAGTTaGAATGATCGTGGACTAAGA +
Preference number: 2 (lower is better)
Translates to: SVEDGGLLSIVILQREVRCHPTS*NDRGLR
Trigger: TCTTAGTCCACGATCATTCCAACTGGTGGGATGACA...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGTTGCCCAGGAAGGTGTaGACAAGGTCTGAATCTACC +
Preference number: 2 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELPRKV*TRSEST
Trigger: GGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAA...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR TCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGAGGTCTGAATCTACCTaGCTATGCATTTGCATGACT +
Preference number: 2 (lower is better)
Translates to: PSQTQKQILPTLWGKLTERSEST*LCICMT
Trigger: AGTCATGCAAATGCATAGTCAGGTAGATTCAGACCT...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CAA 90 bp ATGTGGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: MWLATEARPDGRALLRRLGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...CAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR GCA 72 bp CCAGCCTCCAACCAGCTTCTGCTTCTTAGATCGGACTaGCCTGAGTGGCGGGCGGCTCGGCAGGGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: PASNQLLLLRSD*PEWRAARQGVP
Trigger: AGGGACCCCCTGCCGAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 3 (lower is better)
Translates to: KKVSGRYTLILTSPAHTEGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR GCA 72 bp ACTGGACAGAGGCCCAGCCAGCCTCCAACCAGCTTCTaGTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGG +
Preference number: 3 (lower is better)
Translates to: TGQRPSQPPTSF*FLDRTALSGGR
Trigger: CCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGGCTGGCTGGGCCTCTGTCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CCA 72 bp CTCCACTTACATCCCTTGACCCCCGAAACACGGCACTaGGGGACTGCAGCCCTGCTGACCAGGCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: LHLHPLTPETRH*GTAALLTRLSS
Trigger: GGAGGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp GGCTCCCAGGGTGACCAAGAGGACTCCGTAGCTGACCAGCACCCACCAGCTGGCCCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: GSQGDQEDSVADQHPPAGPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...GCCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCTTGGTCACCCTGGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CAA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGACTTCAGTGCTACCGTaGGAAGTGGCCAGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWTSVLP*EVARLL
Trigger: CAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp CCAGGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTaGCAGAGCTTGGTGCTGTGCCACAGACTGACAGAA +
Preference number: 3 (lower is better)
Translates to: PGCPPSPVRDWC*QSLVLCHRLTE
Trigger: TTCTGTCAGTCTGTGGCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGTGTGGGGCCTGAGTTaGCCCCAGTCCCTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRVWGLS*PQSLEE
Trigger: CTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACAC...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 72 bp GGTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTaGCCCCCGAAACACGGCACTGGGGGACTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: GLSLCNDSTYIP*PPKHGTGGLQP
Trigger: GGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 72 bp CACAGATGCCTGTCCCCATGTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCACTCCACCCCAGGTCT +
Preference number: 3 (lower is better)
Translates to: HRCLSPCRQRGL*PWQLSPLHPRS
Trigger: AGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACAGGCATCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR CCA 72 bp GCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTaGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGAT +
Preference number: 3 (lower is better)
Translates to: AGRGLDLSCPEV*GLSLPQSLEED
Trigger: ATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp AGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTaGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACAT +
Preference number: 3 (lower is better)
Translates to: RNTHSTVARDGP*LQSRAGTVCKH
Trigger: ATGTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp GGGAAGAGGGGACAAGGAAATGCTAGGGGCTCCAGGTaGAGGAGGAAGTCTGATTGGTGCCTGGGATTGGCC +
Preference number: 3 (lower is better)
Translates to: GKRGQGNARGSR*RRKSDWCLGLA
Trigger: GGCCAATCCCAGGCACCAATCAGACTTCCTCCTCCACCTGGAGCCCCTAGCATTTCCTTGTCCCCTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCCCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: TSVLPLEVARLLRKLPLAPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR-3UTR CAA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGGTGTGGGGCCTGAGTTaGCCCCAGTCCCTGGAAGAG +
Preference number: 3 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKVWGLS*PQSLEE
Trigger: CTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACAC...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 72 bp GACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTCAGGGATGAAGAGCGC +
Preference number: 3 (lower is better)
Translates to: DEDEAGGQASND*DHLADVRDEER
Trigger: GCGCTCTTCATCCCTGACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CAA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCCTGGACCATCAGGTTaGATGAAAGAGACAGGGTGG +
Preference number: 3 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPPGPSG*MKETGW
Trigger: CCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CAA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCACCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTAPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR GCA 72 bp GGGAAACTTCCAGGCCAGTGTGGCAGGCTCAAATGCTaGCCATCAGTGACAACCCAGCTGCCTTTTTGTTTG +
Preference number: 3 (lower is better)
Translates to: GKLPGQCGRLKC*PSVTTQLPFCL
Trigger: CAAACAAAAAGGCAGCTGGGTTGTCACTGATGGGCAGCATTTGAGCCTGCCACACTGGCCTGGAAGTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR GCA 72 bp AGGCTGGTAAGAGAGCCCCCACTGTCCCCAATTATGTaGGTGGGAGAGACTGAGCTACACAGTGAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: RLVREPPLSPIM*VGETELHSEVR
Trigger: TCTCACTTCACTGTGTAGCTCAGTCTCTCCCACGCACATAATTGGGGACAGTGGGGGCTCTCTTACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CCA 72 bp CAGCCTGGACCATCAGGTTTGATGAAAGAGACAGGGTaGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCT +
Preference number: 3 (lower is better)
Translates to: QPGPSGLMKETG*GPSRPGKCLLA
Trigger: AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp GGGAGGTGGGGAGATAGCCTATCTCTTCGCCCTCTCTaGGGTAACAATTCCAGTGTGACATCAATGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GRWGDSLSLRPL*GNNSSVTSMWL
Trigger: CAGCCACATTGATGTCACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGATAGGCTATCTCCCCACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR CCA 72 bp ACCAATGGCAAAGGCCTTGTGTTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCACAAAGATGGCGTTGGC +
Preference number: 3 (lower is better)
Translates to: TNGKGLVFPGRQ*LCQEIHKDGVG
Trigger: GCCAACGCCATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR-3UTR CAA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGATGACTGAGATCACCTaGCCGATGTCAGGGATGAAG +
Preference number: 3 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVMTEIT*PMSGMK
Trigger: CTTCATCCCTGACATCGGCAAGGTGATCTCAGTCAT...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
3UTR CCA 72 bp CTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTaGGGGTTGCCCAGGAAGGTGTGGACAAGGTCTGAA +
Preference number: 3 (lower is better)
Translates to: LLAMGKRLTGSW*GLPRKVWTRSE
Trigger: TTCAGACCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp AAAATCCAGACTGGAAGGGAAACTTCCAGGCCAGTGTaGCAGGCTCAAATGCTGCCCATCAGTGACAACCCA +
Preference number: 3 (lower is better)
Translates to: KIQTGRETSRPV*QAQMLPISDNP
Trigger: TGGGTTGTCACTGATGGGCAGCATTTGAGCCTGCCACACTGGCCTGGAAGTTTCCCTTCCAGTCTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 72 bp GGACAAGGTCTGAATCTACCTGACTATGCATTTGCATaGCTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCC +
Preference number: 3 (lower is better)
Translates to: GQGLNLPDYAFA*LQCYRWKWPGS
Trigger: GGAGCCTGGCCACTTCCAACGGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTAGATTCAGACCTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp TTTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTATGGGAAAGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: FDERDRVGPLKA*EMSISYGKEAD
Trigger: GTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR-3UTR CAA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCATACCTGACTATGCATTaGCATGACTTCAGTGCTACC +
Preference number: 3 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTAYLTMH*HDFSAT
Trigger: GGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTA...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 72 bp GAAGAGGATGTCCGGATGTCATCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGCCCCATAGCTCTAAGA +
Preference number: 3 (lower is better)
Translates to: EEDVRMSSHQLE*SWTKNGPIALR
Trigger: TCTTAGAGCTATGGGGCCATTCTTAGTCCACGATCATTCCAACTGGTGGGATGACATCCGGACATCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
3UTR TCA 72 bp ATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGTCTaGATCTACCTGACTATGCATTTGCATGACTTCAGT +
Preference number: 3 (lower is better)
Translates to: MVGVAQEGVDKV*IYLTMHLHDFS
Trigger: ACTGAAGTCATGCAAATGCATAGTCAGGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAACCCCCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR CCA 72 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATaGGGAAAGCTAACGGAGGAATACTCACAGCACCGT +
Preference number: 3 (lower is better)
Translates to: PSQTQKQILPTL*GKLTEEYSQHR
Trigger: ACGGTGCTGTGAGTATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
3UTR TCA 72 bp ATTCTCCAGAGGGAAGTCAGACTGGATTCTTTCTTATaGGATCTACCGACTCTCTTCACCCGTGGATTCCAG +
Preference number: 3 (lower is better)
Translates to: ILQREVRLDSFL*DLPTLFTRGFQ
Trigger: CTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAGTCTGACTTCCCTCTGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACGGACTGCAGCCCTGCTaGCCAGGCTGTCCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNGLQPC*PGCPPS
Trigger: GCTAGGAGGACAGCCTGGTCAGCAGGGCTGCAGTCC...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGCGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGRHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGTGTACCAAGGGCCGCTaGCCCCCTCCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: HAQDDEGSGNGHGHVLRGCTKGR*PPPALS
Trigger: CGAAAGAGCCGGAGGGGGCCAGCGGCCCTTGGTACA...CCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTCGGACTGCCCTGAGTaGCGGGCGGCTCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASESDCPE*RAARQG
Trigger: CCCCTGCCGAGCCGCCCGCCACTCAGGGCAGTCCGA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCAGAGGACTCCGTAGCTaGCCAGCACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSRGLRS*PAPTSW
Trigger: CCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCT...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCATCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPSTQGL*SSRARS
Trigger: GGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGA...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTAACCAGACCAGCGTCTaGAGCACTCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSNQTSV*STRRRR
Trigger: GCGGCGGCGGCGAGTGCTGCAGACGCTGGTCTGGTT...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCGGAGGAGGAGAGGGATaGCCAGCCTGGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSGGGEG*PAWTIR
Trigger: CCTGATGGTCCAGGCTGGGCATCCCTCTCCTCCTCC...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACTCCAGGAAGCCGGCCTaGTCAGGATGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHSRKPA*SGCSLG
Trigger: CCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGA...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp AGGGTGAGCAGGAACCAGACCAGCGTCTGCAGCACTCGCCGCCGCCGCTCCCGCCACCCACCAGCTGGCTaGTTTGACCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RVSRNQTSVCSTRRRRSRHPPAG*FDLFHL
Trigger: GAGATGGAAGAGGTCAAACCAGCCAGCTGGTGGGTG...GCGGGAGCGGCGGCGGCGAGTGCTGCAGACGCTGGTCTGGTTCCTGCTCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp AGGGTGAGCAGGAACCAGACCAGCGTCTGCAGCACTCGCCGCCGCCGCTCCCGCGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RVSRNQTSVCSTRRRRSRGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...GCGGGAGCGGCGGCGGCGAGTGCTGCAGACGCTGGTCTGGTTCCTGCTCACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACCGGCCTAGGACTGGGTaGAGACCCTCTGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNRPRTG*RPSGWV
Trigger: TACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCG...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
3UTR CAA 72 bp TGGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTaGCTGAGGAGGCTGGTAAGAGAGCCCCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: WLATEARPDGRA*LRRLVREPPLS
Trigger: GGACAGTGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGAGGCTGCTGGGAAGTTaGGTAACCCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWRLLGS*VTLHPG
Trigger: GCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGAAGTGGCCAGGCTCCTaGGGAAGCTACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWKWPGS*GSYHWP
Trigger: AGGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACCCCCAAGTGTGGAAGTaGTGCCTCTGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNPQVWK*CLCPDP
Trigger: GGGGTCTGGACAGAGGCACCACTTCCACACTTGGGG...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCCACGTCCTCCTCCACTaGCACCCCCTGGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLHVLLH*HPLVAQ
Trigger: CTGCGCTACCAGGGGGTGCCAGTGGAGGAGGACGTG...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGGTCAGGGACTGGTGCTaGCAGAGCTTGGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWVRDWC*QSLVLC
Trigger: GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGAC...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCCCCGAAACACGGCACTaGGGGACTGCAGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLPETRH*GTAALL
Trigger: CAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGG...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAACAGAGGGACGGGCGTaGGGCGAGGACGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRTEGRA*GEDARI
Trigger: GATCCTGGCGTCCTCGCCCCACGCCCGTCCCTCTGT...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRRQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR TCA 90 bp GGCTCCCAGGGTGACCAAGAGGACTCCGTAGCTGACCAGCACCCACCAGCTGGCAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: GSQGDQEDSVADQHPPAGRQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...GCCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCTTGGTCACCCTGGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp GGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGCCGGCCAGGCCTCCAATaGCTGAGATCACCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: GHGHVLRGIGQEHVRIHSRPGLQ*LRSPCR
Trigger: TCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCG...GCTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSRRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCTGCAGGGAAAGGGTCTaGGCTTTTCCGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLCRERV*AFPRWR
Trigger: CCGCCACCGCGGAAAAGCTCAGACCCTTTCCCTGCA...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570101.5
CDS-3UTR GCA 90 bp GGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCCTGATGGGCTGTaGCAGAGGCGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGEHAQDDEGSGNGHGHVLPDGL*QRRLLL
Trigger: AAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAG...GACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACCAAGTGTGGAAGTGGTaGCTCTGTCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHQVWKW*LCPDPQ
Trigger: CTGGGGGTCTGGACAGAGGCACCACTTCCACACTTG...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACCAGACCAGCGTCTaGAGCACTCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EVQDRVGGEHAQDDEGSGNQTSV*STRRRR
Trigger: GCGGCGGCGGCGAGTGCTGCAGACGCTGGTCTGGTT...GCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GGCTCCCAGGGTGACCAAGAGGACTCCGTAGCTGACCAGCACCCACCAGCTGGCGGGCTACTTCTGTGCTaGCTTCAGCAGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSQGDQEDSVADQHPPAGGLLLC*LQQSWR
Trigger: CCTCCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCC...GCCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCTTGGTCACCCTGGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGCTTCCCACTCACTCTTaGGGGCTGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGLPTHS*GLCPHR
Trigger: CCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAG...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACCTTCCCACTCACTCTTaGGGGCTGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHLPTHS*GLCPHR
Trigger: CCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAG...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACAGGTCCTCTCATTGCTaGCCTGGGAGCAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNRSSHC*PGSSRP
Trigger: TGGCCTACTGCTCCCAGGCCAGCAATGAGAGGACCT...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGTCCAGGAAGCCGGCCTaGTCAGGATGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DDEGSGNGHGHVLRGIGQSRKPA*SGCSLG
Trigger: CCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGA...CTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp GGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCGCGTTGGCTGTGGTCTaGCCGAAGATGAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGEHAQDDEGSGNGHGHVALAVV*PKMKAP
Trigger: GGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGC...GACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGCACGGGACGGCCCTTaGCTTCAGAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLARDGP*LQSRAG
Trigger: GCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGGCTAGGGGCTCCAGGTaGAGGAGGAAGTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGARGSR*RRKSDW
Trigger: CCAATCAGACTTCCTCCTCCACCTGGAGCCCCTAGC...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCAGTCAGGGACTGGTGCTaGCAGAGCTTGGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPVRDWC*QSLVLC
Trigger: GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGAC...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCCGAAACACGGCACTaGGGGACTGCAGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPPETRH*GTAALL
Trigger: CAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGG...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCCGGCCTAGGACTGGGTaGAGACCCTCTGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLRPRTG*RPSGWV
Trigger: TACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCG...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570101.5
CDS-3UTR TCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSQASND*DHLADV
Trigger: GACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTG...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWQASND*DHLADV
Trigger: GACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTG...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCGAAGGGGACTGGATTTaGGCTGTCCAGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCEGDWI*AVQRCG
Trigger: CCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTC...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCCCCACACAGAGGGTCTaGAAGGTTCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSPTQRV*KVLSLL
Trigger: GAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTGGG...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGTCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTESTQGL*SSRARS
Trigger: GGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGA...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCCAAGTGTGGAAGTGGTaGCTCTGTCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCQVWKW*LCPDPQ
Trigger: CTGGGGGTCTGGACAGAGGCACCACTTCCACACTTG...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACATACCCATCTGCAGTaGGATGCCTGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: QRPRPCPPRDRTGARQDPHTHLQ*DACCHA
Trigger: GGCGTGGCAGCAGGCATCGCACTGCAGATGGGTATG...TGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCACCAGCATACCCATCTaGAGTGCGATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GEHAQDDEGSGNGHGHVLTSIPI*SAMPAA
Trigger: GGCAGCAGGCATCGCACTGCAGATGGGTATGCTGGT...GAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp ATGTGGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGGTAGGTCCTCTCATTaGTGGCCTGGGAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: MWLATEARPDGRALLRRLGRSSH*WPGSSR
Trigger: CCTACTGCTCCCAGGCCAGCAATGAGAGGACCTACC...CAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGTAGGTCCTCTCATTaGTGGCCTGGGAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EHAQDDEGSGNGHGHVLRGRSSH*WPGSSR
Trigger: CCTACTGCTCCCAGGCCAGCAATGAGAGGACCTACC...TCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAAACCAGACCAGCGTCTaGAGCACTCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRNQTSV*STRRRR
Trigger: GCGGCGGCGGCGAGTGCTGCAGACGCTGGTCTGGTT...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGGTTCATGGTGGGGGTTaGCCAGGAAGGTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWVHGGG*PGRCGQ
Trigger: TTGTCCACACCTTCCTGGGCAACCCCCACCATGAAC...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACTGGCTTCAGCAGAGCTaGAGGAAACTGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNWLQQS*RKLSGS
Trigger: AGAGCCGCTCAGTTTCCTCCAGCTCTGCTGAAGCCA...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATATTGTTGATGCTGACCTaGGCCATGGCCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: AQDDEGSGNGHGHVLRGILLMLT*AMAPRA
Trigger: GGCTCTCGGGGCCATGGCCCAGGTCAGCATCAACAA...TATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGTGTACCAAGGGCCGCTaGCCCCCTCCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLCTKGR*PPPALS
Trigger: CGAAAGAGCCGGAGGGGGCCAGCGGCCCTTGGTACA...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGATCCAGGAAGCCGGCCTaGTCAGGATGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRSRKPA*SGCSLG
Trigger: CCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGA...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCTCCAGGAAGCCGGCCTaGTCAGGATGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVSRKPA*SGCSLG
Trigger: CCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGA...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCCACGTCCTCCTCCACTaGCACCCCCTGGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: TKMALAVVWPKMKAPRVTHVLLH*HPLVAQ
Trigger: CTGCGCTACCAGGGGGTGCCAGTGGAGGAGGACGTG...GGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTGCGTTGGCTGTGGTCTaGCCGAAGATGAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSALAVV*PKMKAP
Trigger: GGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGC...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCCACAAAGATGGCGTTaGCTGTGGTCTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWPQRWR*LWSGRR
Trigger: TCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGG...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGCCACAAAGATGGCGTTaGCTGTGGTCTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRPQRWR*LWSGRR
Trigger: TCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGG...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGCACGGGACGGCCCTTaGCTTCAGAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRARDGP*LQSRAG
Trigger: GCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCATCGGACTGCCCTGAGTaGCGGGCGGCTCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTASDCPE*RAARQG
Trigger: CCCCTGCCGAGCCGCCCGCCACTCAGGGCAGTCCGA...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGATGGAGACCCTCTGGCTaGGTAAAGGCGCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRWRPSG*VKARQS
Trigger: GCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCA...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGATACTGTGGGGTAACCTaGGGAGGAGCTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRYCGVT*GGAPGP
Trigger: GGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTA...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCATACTGTGGGGTAACCTaGGGAGGAGCTCCGGGACCC +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPYCGVT*GGAPGP
Trigger: GGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTA...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGCTCCCAGTCCAGCCTaGGGTTGGAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLAPSPA*GWSPEI
Trigger: TATCTCAGGGCTCCAACCCCAGGCTGGACTGGGAGC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570101.5
CDS-3UTR TCA 90 bp CGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGCAGGCCTCCAATGACTaGGATCACCTTGCCGATGTC +
Preference number: 4 (lower is better)
Translates to: RPRPCPPRDRTGARQDPQQASND*DHLADV
Trigger: GACATCGGCAAGGTGATCTCAGTCATTGGAGGCCTG...CTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGAGAGTTTGGCTTGAATaGGGCACAGCCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRRVWLE*GTALGR
Trigger: TCTTCCCAGGGCTGTGCCTCATTCAAGCCAAACTCT...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGACCAGCTGGCTGGTTTaGCCTCTTCCATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRTSWLV*PLPSQR
Trigger: TCTCTGAGATGGAAGAGGTCAAACCAGCCAGCTGGT...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGACCAGCTGGCTGGTTTaGCCTCTTCCATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWTSWLV*PLPSQR
Trigger: TCTCTGAGATGGAAGAGGTCAAACCAGCCAGCTGGT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGAGAGGACTCCGTAGCTaGCCAGCACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTERGLRS*PAPTSW
Trigger: CCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCT...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGGACTGCAGCCCTGCTaGCCAGGCTGTCCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGGLQPC*PGCPPS
Trigger: GCTAGGAGGACAGCCTGGTCAGCAGGGCTGCAGTCC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACTGGGGTTGGAGCCCTaGGATAGAAAGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPLGLEP*DRKGGL
Trigger: CAGCCCACCCTTTCTATCTCAGGGCTCCAACCCCAG...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGACTCCCTGATGGGCTGTaGCAGAGGCGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRLPDGL*QRRLLL
Trigger: AAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAG...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp ACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCGCTCCCCGGCATCCGTaGTCAAGTCCCACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TKMALAVVWPKMKAPRVTAPRHP*SSPTRC
Trigger: ACAGCGAGTGGGACTTGAGCACGGATGCCGGGGAGC...GGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTGCTCCCCGGCATCCGTaGTCAAGTCCCACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPAPRHP*SSPTRC
Trigger: ACAGCGAGTGGGACTTGAGCACGGATGCCGGGGAGC...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCATACCCATCTGCAGTaGGATGCCTGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVHTHLQ*DACCHA
Trigger: GGCGTGGCAGCAGGCATCGCACTGCAGATGGGTATG...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACATACCCATCTGCAGTaGGATGCCTGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPHTHLQ*DACCHA
Trigger: GGCGTGGCAGCAGGCATCGCACTGCAGATGGGTATG...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTTGTTGATGCTGACCTaGGCCATGGCCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASELLMLT*AMAPRA
Trigger: GGCTCTCGGGGCCATGGCCCAGGTCAGCATCAACAA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCAGATGGCCCCAAGTGTaGAAGTGGTGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GEHAQDDEGSGNGHGHVLRWPQV*KWCLCP
Trigger: TGGACAGAGGCACCACTTCCACACTTGGGGCCATCT...GAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCAAGATGGCCCCAAGTGTaGAAGTGGTGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPRWPQV*KWCLCP
Trigger: TGGACAGAGGCACCACTTCCACACTTGGGGCCATCT...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGGAAACCAATCTCCCTaGGGATGGAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DDEGSGNGHGHVLRGIGQGNQSP*GWRGAG
Trigger: TCCTGCCCCTCTCCATCCCCAGGGAGATTGGTTTCC...CTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGTCCAGGAAGCCGGCCTaGTCAGGATGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTESRKPA*SGCSLG
Trigger: CCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGA...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCCACCCACCAGCTGGCTaGTTTGACCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCHPPAG*FDLFHL
Trigger: GAGATGGAAGAGGTCAAACCAGCCAGCTGGTGGGTG...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCTGGGTGGAGACCCTCTaGCTGGGTAAAGGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLAWVETL*LGKGAA
Trigger: TGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCA...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGGCGATTCCCAGGCCTaGAGCGAGAAGGGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRGDSQA*SEKGGL
Trigger: TAGCCCACCCTTCTCGCTCCAGGCCTGGGAATCGCC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGCTCCCAGTCCAGCCTaGGGTTGGAGCCCTGAGATA +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEAPSPA*GWSPEI
Trigger: TATCTCAGGGCTCCAACCCCAGGCTGGACTGGGAGC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGAGGCTGCTGGGAAGTTaGGTAACCCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTERLLGS*VTLHPG
Trigger: GCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCT...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGAGAGGACTCCGTAGCTaGCCAGCACCCACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSTKMALAVVWPKMKAPRRGLRS*PAPTSW
Trigger: CCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCT...CCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVRRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGAAGTGGCCAGGCTCCTaGGGAAGCTACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRKWPGS*GSYHWP
Trigger: AGGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTT...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAGTGGAGGAGGAAGTCTaGTTGGTGCCTGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRVEEEV*LVPGIG
Trigger: GCCAATCCCAGGCACCAATCAGACTTCCTCCTCCAC...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGTGCAGGGAAAGGGTCTaGGCTTTTCCGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLCRERV*AFPRWR
Trigger: CCGCCACCGCGGAAAAGCTCAGACCCTTTCCCTGCA...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGGGGTTGGAGCCCTaGGATAGAAAGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPLGLEP*DRKGGL
Trigger: CAGCCCACCCTTTCTATCTCAGGGCTCCAACCCCAG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCATTTGGGCTACTTCTGTaGTGGCTTCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPFGLLL*WLQQSW
Trigger: CCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCCAAA...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AGGCACAGCCCTGGGAAGACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTTGTGCCAGAGGCGGTTaGTCCTTCTCCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RHSPGKTKMKQAARPPMTCARGG*SFSPKV
Trigger: GACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA...AGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTCTTCCCAGGGCTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCCTCCCTGATGGGCTGTaGCAGAGGCGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLALPDGL*QRRLLL
Trigger: AAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAG...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGCGGACTCTTCTCAACCTaGTCTTTCTCCCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GHGHVLRGIGQEHVRIHSGLFST*SFSLMG
Trigger: GCCCATCAGGGAGAAAGAGCAGGTTGAGAAGAGTCC...GCTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCTGCCTTACAACCACATaGCTCAGGGAGCTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GGEHAQDDEGSGNGHGHVCLTTT*LRELSN
Trigger: GTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCA...GACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGTCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSSTQGL*SSRARS
Trigger: GGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGA...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCATACCCATCTGCAGTaGGATGCCTGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLHTHLQ*DACCHA
Trigger: GGCGTGGCAGCAGGCATCGCACTGCAGATGGGTATG...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGCGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKRHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCTACTCAGGACAGGGTaGTCTGTGGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASELLRTG*SVEDGG
Trigger: GCCACCATCCTCCACAGAGCACCCTGTCCTGAGTAG...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCCTTCTTAGATCGGACTaGCCTGAGTGGCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLALLRSD*PEWRAA
Trigger: AGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAG...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGACGGCACTGGGGGACTaGAGCCCTGCTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVTALGD*SPADQA
Trigger: AGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGT...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCAGCCTGATGCCCACATaGTCAGGCCAGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVSLMPT*SGQRCR
Trigger: CCTACATCGCTGGCCTGAGCATGTGGGCATCAGGCT...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCGCAGAGGGAAGAGTTTaGGCTACTTCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GEHAQDDEGSGNGHGHVLAEGRV*ATSVLA
Trigger: AGCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGC...GAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACTTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNFLQGL*VLPYNH
Trigger: GTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAA...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGTGTACCAAGGGCCGCTaGCCCCCTCCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSCTKGR*PPPALS
Trigger: CGAAAGAGCCGGAGGGGGCCAGCGGCCCTTGGTACA...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCGGAAACCAATCTCCCTaGGGATGGAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVGNQSP*GWRGAG
Trigger: TCCTGCCCCTCTCCATCCCCAGGGAGATTGGTTTCC...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWGQDVP*GHLFIW
Trigger: CCAGATAAAGAGATGACCCCAGGGAACATCCTGACC...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGCACGTCCTCCTCCACTaGCACCCCCTGGTAGCGCAG +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRHVLLH*HPLVAQ
Trigger: CTGCGCTACCAGGGGGTGCCAGTGGAGGAGGACGTG...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCAAGCTACCACTGGCCTaGGGTAATGAGCACAACCCC +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLKLPLA*GNEHNP
Trigger: GGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTT...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGACTGACAGGTTCATGGTaGGGGTTGCCCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRLTGSW*GLPRKV
Trigger: CACCTTCCTGGGCAACCCCCACCATGAACCTGTCAG...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACCCCCAATTATGTGCGTaGGAGAGACTGAGCTACACA +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNPQLCA*ERLSYT
Trigger: TGTGTAGCTCAGTCTCTCCCACGCACATAATTGGGG...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACTCTCTTCGCCCTCTCTaGGGTAACAATTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNSLRPL*GNNSSV
Trigger: CACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGA...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGAGGAGGAAGTCTGATTaGTGCCTGGGATTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWRRKSD*CLGLAK
Trigger: TTTGGCCAATCCCAGGCACCAATCAGACTTCCTCCT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTGGCAGTTTATCCATCTaGGGACTGGACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSGSLSI*GLDRGP
Trigger: TGGGCCTCTGTCCAGTCCCCAGATGGATAAACTGCC...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCAGCCCTGTCAGGGACTaGTGCTGGCAGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLASPVRD*CWQSLV
Trigger: CACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCT...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLARQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCTATGGGAAAGAGGCTaGCAGGTTCATGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVLWERG*QVHGGG
Trigger: ACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAG...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTTGTGCCAGAGGCGGTTaGTCCTTCTCCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPCARGG*SFSPKV
Trigger: GACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTGGTAGGTCCTCTCATTaGTGGCCTGGGAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPGRSSH*WPGSSR
Trigger: CCTACTGCTCCCAGGCCAGCAATGAGAGGACCTACC...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGAGGAGGAGAGGGATaGCCAGCCTGGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRGGGEG*PAWTIR
Trigger: CCTGATGGTCCAGGCTGGGCATCCCTCTCCTCCTCC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCACGATCTCAGCTCATTaGAGTCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLTISAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGACTGCAATGAGCTGAGATCGT...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAGGCAGGCTCAAATGCTaGCCATCAGTGACAACCCAG +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRGRLKC*PSVTTQ
Trigger: CTGGGTTGTCACTGATGGGCAGCATTTGAGCCTGCC...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAACGGCACTGGGGGACTaGAGCCCTGCTGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKTALGD*SPADQA
Trigger: AGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGT...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTAGCCTGATGCCCACATaGTCAGGCCAGCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPSLMPT*SGQRCR
Trigger: CCTACATCGCTGGCCTGAGCATGTGGGCATCAGGCT...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCTTCACTTCAGGCTaGTGCATGCTGAAATCCGAA +
Preference number: 4 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHVFTSG*CMLKSE
Trigger: TTCGGATTTCAGCATGCAGCAGCCTGAAGTGAAGAC...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCTTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LTPETRHWGTAALLTRLSFSPKV*DLILLT
Trigger: AGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAA...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp ACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCAGGTCCTCTCATTGCTaGCCTGGGAGCAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TKMALAVVWPKMKAPRVTRSSHC*PGSSRP
Trigger: TGGCCTACTGCTCCCAGGCCAGCAATGAGAGGACCT...GGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAATGTACCAAGGGCCGCTaGCCCCCTCCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKCTKGR*PPPALS
Trigger: CGAAAGAGCCGGAGGGGGCCAGCGGCCCTTGGTACA...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGGAAACCAATCTCCCTaGGGATGGAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRGNQSP*GWRGAG
Trigger: TCCTGCCCCTCTCCATCCCCAGGGAGATTGGTTTCC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGAAGCTGGCATATTTCTaGAAACCAATCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGNGHGHVLRGIGQEHVRKLAYF*KPISLG
Trigger: CCCCAGGGAGATTGGTTTCCAGAAATATGCCAGCTT...CCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACAAGCTGGCATATTTCTaGAAACCAATCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNKLAYF*KPISLG
Trigger: CCCCAGGGAGATTGGTTTCCAGAAATATGCCAGCTT...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: RPRPCPPRDRTGARQDPQGQDVP*GHLFIW
Trigger: CCAGATAAAGAGATGACCCCAGGGAACATCCTGACC...CTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCAATGAGGCACAGCCCTaGGAAGACGAAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCNEAQP*EDEDEA
Trigger: TGCTTCATCTTCGTCTTCCCAGGGCTGTGCCTCATT...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCAAAGCTACCACTGGCCTaGGGTAATGAGCACAACCCC +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPKLPLA*GNEHNP
Trigger: GGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTT...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGACAGGTTCATGGTaGGGGTTGCCCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPLTGSW*GLPRKV
Trigger: CACCTTCCTGGGCAACCCCCACCATGAACCTGTCAG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGCTAGGGGCTCCAGGTaGAGGAGGAAGTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRARGSR*RRKSDW
Trigger: CCAATCAGACTTCCTCCTCCACCTGGAGCCCCTAGC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGGCAGTTTATCCATCTaGGGACTGGACAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEGSLSI*GLDRGP
Trigger: TGGGCCTCTGTCCAGTCCCCAGATGGATAAACTGCC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGAGGACGCCAGGATCTaGACCCCTGCAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKREDARI*TPAGKG
Trigger: CCCTTTCCCTGCAGGGGTCCAGATCCTGGCGTCCTC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTAAGGCGCGGCAGAGCTaGCGCAACAGAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAKARQS*RNRGTG
Trigger: GCCCGTCCCTCTGTTGCGCCAGCTCTGCCGCGCCTT...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCGATTCCCAGGCCTaGAGCGAGAAGGGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRGDSQA*SEKGGL
Trigger: TAGCCCACCCTTCTCGCTCCAGGCCTGGGAATCGCC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGTCACAGTGGGTAGCTaGCAGAGCCAGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLVTVGS*QSQNRS
Trigger: GCTTCTATTCTGGCTCTGCCAGCTACCCACTGTGAC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570101.5
CDS-3UTR TCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGAGAGCTGGAGGAAACTaGGCGGCTCTCACGCTTACT +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTERAGGN*AALTLT
Trigger: AGTAAGCGTGAGAGCCGCTCAGTTTCCTCCAGCTCT...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGAGGCTGCTGGGAAGTTaGGTAACCCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRRLLGS*VTLHPG
Trigger: GCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCT...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGAGGCTGCTGGGAAGTTaGGTAACCCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVRLLGS*VTLHPG
Trigger: GCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCT...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAAGAGTTTGGCTTGAATaGGGCACAGCCCTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRRVWLE*GTALGR
Trigger: TCTTCCCAGGGCTGTGCCTCATTCAAGCCAAACTCT...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGGGTCCTCTATGATGTaGGACTTCCTGCCGCCATCC +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGGSSMM*DFLPPS
Trigger: GGATGGCGGCAGGAAGTCTCACATCATAGAGGACCC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAAGTGGCCAGGCTCCTaGGGAAGCTACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKKWPGS*GSYHWP
Trigger: AGGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTT...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCCACCAAGAGGGGATGTaGGAAAAGGCAGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCHQEGM*EKAVYP
Trigger: TGGATAAACTGCCTTTTCTCACATCCCCTCTTGGTG...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGTGTGCCAGAGGCGGTTaGTCCTTCTCCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLCARGG*SFSPKV
Trigger: GACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGCTCCCTGATGGGCTGTaGCAGAGGCGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRLPDGL*QRRLLL
Trigger: AAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAG...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGGACTCTTCTCAACCTaGTCTTTCTCCCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEGLFST*SFSLMG
Trigger: GCCCATCAGGGAGAAAGAGCAGGTTGAGAAGAGTCC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCTGCCTTACAACCACATaGCTCAGGGAGCTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVCLTTT*LRELSN
Trigger: GTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCA...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGCAAGTGTGGAAGTGGTaGCTCTGTCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLQVWKW*LCPDPQ
Trigger: CTGGGGGTCTGGACAGAGGCACCACTTCCACACTTG...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TGTCCCCATGTAGACAGCGAGGGCTATGACCATGGCAGCTGTCACCACTCCACCGCACACCTGTCAGCTTaGCACACACAGCCCATACCA +
Preference number: 4 (lower is better)
Translates to: CPHVDSEGYDHGSCHHSTAHLSA*HTQPIP
Trigger: TGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGC...GGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp AACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACGTCTTCACTTCAGGCTaGTGCATGCTGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: NGHGHVLRGIGQEHVRIHVFTSG*CMLLKT
Trigger: CGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGAC...GTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS-3UTR GCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGCTCATTGCAGTCTCTaGCTCCTGGGTTTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRAHCSL*LLGLSG
Trigger: GCCGCTTAAACCCAGGAGGCAGAGACTGCAATGAGC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCTCCAACCAGCTTCTaGTTCTTAGATCGGACTGCC +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEPPTSF*FLDRTA
Trigger: GGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCATCAGGAAGCCACAGATaGCTTCCCCATTTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRPRPCPPRDRTGARQDPSGSHR*LPHFRL
Trigger: CAGCCTAAAATGGGGAAGGCATCTGTGGCTTCCTGA...TGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTTGGCTTCAGCAGAGCTaGAGGAAACTGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPWLQQS*RKLSGS
Trigger: AGAGCCGCTCAGTTTCCTCCAGCTCTGCTGAAGCCA...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGCTACTTCTGTGCTaGCTTCAGCAGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRGLLLC*LQQSWR
Trigger: CCTCCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCC...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGGGCTACTTCTGTGCTaGCTTCAGCAGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLGLLLC*LQQSWR
Trigger: CCTCCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAGCAGAGGGAAGAGTTTaGGCTACTTCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRAEGRV*ATSVLA
Trigger: AGCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGC...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGCTTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GHGHVLRGIGQEHVRIHSFSPKV*DLILLT
Trigger: AGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAA...GCTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGCCCCAAGTGTGGAAGTaGTGCCTCTGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVPQVWK*CLCPDP
Trigger: GGGGTCTGGACAGAGGCACCACTTCCACACTTGGGG...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCAGATGGCCCCAAGTGTaGAAGTGGTGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLARWPQV*KWCLCP
Trigger: TGGACAGAGGCACCACTTCCACACTTGGGGCCATCT...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAAGGTGTAGACAGCGATaGCCACCTCACATAGCACAC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRRCRQR*PPHIAH
Trigger: GTGTGCTATGTGAGGTGGCCATCGCTGTCTACACCT...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCTGTACCAAGGGCCGCTaGCCCCCTCCGGCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFCTKGR*PPPALS
Trigger: CGAAAGAGCCGGAGGGGGCCAGCGGCCCTTGGTACA...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCCACAAAGATGGCGTTaGCTGTGGTCTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPPQRWR*LWSGRR
Trigger: TCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCACAGCCCTGGGAAGACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTAGAGATCCACAAAGATaGCGTTGGCTGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RHSPGKTKMKQAARPPMTRDPQR*RWLWSG
Trigger: GCCAGACCACAGCCAACGCCATCTTTGTGGATCTCT...AGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTCTTCCCAGGGCTGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GACAGCGAGGGCTATGACCATGGCAGCTGTCACCACTCCACCCCAGGTCTTCACTTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: DSEGYDHGSCHHSTPGLHFPGRQ*LCQEIH
Trigger: GTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAA...GTGAAGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGAGGCTGACAGGTTCATaGTGGGGGTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLRLTGS*WGLPRK
Trigger: CTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCAGAGGGATGCCCAGCCTaGACCATCAGGTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPEGCPA*TIRFDE
Trigger: TTCATCAAACCTGATGGTCCAGGCTGGGCATCCCTC...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGCACGGGACGGCCCTTaGCTTCAGAGCCGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMARDGP*LQSRAG
Trigger: GCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGC...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGATACTCCCAACCTTATaGGGAAAGCTAACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGILPTL*GKLTEE
Trigger: TTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTAT...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCAGTGTGACATCAATGTaGCTGGCCACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLASVTSM*LATEAR
Trigger: CCTGGCCTCAGTGGCCAGCCACATTGATGTCACACT...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCACCTTTACAGAGGTTTTaGGGAAGAGGGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPPLQRF*GRGDKE
Trigger: TTCCTTGTCCCCTCTTCCCCAAAACCTCTGTAAAGG...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGGAGGACGCCAGGATCTaGACCCCTGCAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQEDARI*TPAGKG
Trigger: CCCTTTCCCTGCAGGGGTCCAGATCCTGGCGTCCTC...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGAAGGCGCGGCAGAGCTaGCGCAACAGAGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKKARQS*RNRGTG
Trigger: GCCCGTCCCTCTGTTGCGCCAGCTCTGCCGCGCCTT...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570101.5
CDS-3UTR CCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAAGGGTGGGCTACTGTaGGGTAACCTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKKGGLL*GNLGRS
Trigger: GCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTT...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGAGTCCAGCCTGGGGTTaGAGCCCTGAGATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTESPAWG*SPEIER
Trigger: CCTTTCTATCTCAGGGCTCCAACCCCAGGCTGGACT...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
3UTR CAA 72 bp CTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTaGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LDLSCPEVWGLS*PQSLEEDVRMS
Trigger: TGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAAGAGCTGGAGGAAACTaGGCGGCTCTCACGCTTACT +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRRAGGN*AALTLT
Trigger: AGTAAGCGTGAGAGCCGCTCAGTTTCCTCCAGCTCT...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAAGAGCTGGAGGAAACTaGGCGGCTCTCACGCTTACT +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGRAGGN*AALTLT
Trigger: AGTAAGCGTGAGAGCCGCTCAGTTTCCTCCAGCTCT...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACACGGCCAGGCCTCCAATaGCTGAGATCACCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTRPGLQ*LRSPCR
Trigger: TCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCG...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGGTCCTCTATGATGTaGGACTTCCTGCCGCCATCC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRGSSMM*DFLPPS
Trigger: GGATGGCGGCAGGAAGTCTCACATCATAGAGGACCC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGAGGAGGGGTCCTCTATaGTGTGAGACTTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRRRGPL*CETSCR
Trigger: GCGGCAGGAAGTCTCACATCATAGAGGACCCCTCCT...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGCTGGATTCTTTCTTATaGGATCTACCGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGLDSFL*DLPTLF
Trigger: GAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAG...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GTGAGACTTCCTGCCGCCATCCACGGCACTGCCAGGACTGGGGAGCAGGAAGGGAGGTCTGAATCTACCTaGCTATGCATTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: VRLPAAIHGTARTGEQEGRSEST*LCICMT
Trigger: AGTCATGCAAATGCATAGTCAGGTAGATTCAGACCT...CCCTTCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCGGCAGGAAGTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGGGCAGCTGAGGGGCTaGGGTGGTCAAAACGGGAAT +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKGQLRG*GGQNGN
Trigger: ATTCCCGTTTTGACCACCTCAGCCCCTCAGCTGCCC...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGAAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRKVCGF*LTTTCL
Trigger: GAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTT...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGCACACCTGTCAGCTTaGCACACACAGCCCATACCA +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLAHLSA*HTQPIP
Trigger: TGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGGCTATAATCTTGTCCTaGTGGTCGCCAATGATGATT +
Preference number: 4 (lower is better)
Translates to: HAQDDEGSGNGHGHVLRGAIILS*WSPMMI
Trigger: AATCATCATTGGCGACCAGCAGGACAAGATTATAGC...CCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR GCA 90 bp GCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGGAGGCAGTGGTTATaGCAAGAGATCCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: AQDDEGSGNGHGHVLRGIGRQWL*QEIHKD
Trigger: ATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCC...TATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGCTACTCAGGACAGGGTaGTCTGTGGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKLLRTG*SVEDGG
Trigger: GCCACCATCCTCCACAGAGCACCCTGTCCTGAGTAG...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTGGAGGAGGAGAGGGATaGCCAGCCTGGACCATCAGG +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAGGGEG*PAWTIR
Trigger: CCTGATGGTCCAGGCTGGGCATCCCTCTCCTCCTCC...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACAGAGCTTGGTGCTGTaGCACAGACTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPQSLVL*HRLTEN
Trigger: GTTTTCTGTCAGTCTGTGGCACAGCACCAAGCTCTG...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEFLQGL*VLPYNH
Trigger: GTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACACCCCAAGTGTGGAAGTaGTGCCTCTGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTPQVWK*CLCPDP
Trigger: GGGGTCTGGACAGAGGCACCACTTCCACACTTGGGG...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGAGGTCCTCTCATTGCTaGCCTGGGAGCAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRRSSHC*PGSSRP
Trigger: TGGCCTACTGCTCCCAGGCCAGCAATGAGAGGACCT...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTAGGTGTAGACAGCGATaGCCACCTCACATAGCACAC +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPRCRQR*PPHIAH
Trigger: GTGTGCTATGTGAGGTGGCCATCGCTGTCTACACCT...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGTCTCGACGCTCAGGAAGCTaGCATATTTCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: GVGEVHPDSDQPSPHRGSRRSGS*HISGNQ
Trigger: TTGGTTTCCAGAAATATGCCAGCTTCCTGAGCGTCG...AGACCCTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGCGACGCTCAGGAAGCTaGCATATTTCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: DDEGSGNGHGHVLRGIGQRRSGS*HISGNQ
Trigger: TTGGTTTCCAGAAATATGCCAGCTTCCTGAGCGTCG...CTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGAGAGATCCACAAAGATaGCGTTGGCTGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRRDPQR*RWLWSG
Trigger: GCCAGACCACAGCCAACGCCATCTTTGTGGATCTCT...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGACTCTCTTCACCCGTaGATTCCAGGCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRDSLHP*IPGMEK
Trigger: CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGCTGACAGGTTCATGGTaGGGGTTGCCCAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVLTGSW*GLPRKV
Trigger: CACCTTCCTGGGCAACCCCCACCATGAACCTGTCAG...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGCCCTGTCAGGGACTaGTGCTGGCAGAGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQSPVRD*CWQSLV
Trigger: CACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCT...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGACAGAGGGACGGGCGTaGGGCGAGGACGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTETEGRA*GEDARI
Trigger: GATCCTGGCGTCCTCGCCCCACGCCCGTCCCTCTGT...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGATGGAGACCCTCTGGCTaGGTAAAGGCGCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRWRPSG*VKARQS
Trigger: GCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCA...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
3UTR CAA 72 bp GGCAGTGGTTATGCCAAGAGATCCACAAAGATGGCGTaGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGYAKRSTKMA*AVVWPKMKAPR
Trigger: CCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAACCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLRQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQRQRGL*PWQLSP
Trigger: TGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCT...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGTCCCCATGTAGACAGCGAGGGCTATGACCATGGCAGCTGTCACCACTCCACCTCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: CPHVDSEGYDHGSCHHSTSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...GGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGGTGTGGACAAGGTCTaGATCTACCTGACTATGCAT +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEGVDKV*IYLTMH
Trigger: ATGCATAGTCAGGTAGATTCAGACCTTGTCCACACC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGCCCACACAGAGGGTCTaGAAGGTTCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVPTQRV*KVLSLL
Trigger: GAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTGGG...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGGTAACAATTCCAGTGTaGCATCAATGTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEVTIPV*HQCGWP
Trigger: TGGCCAGCCACATTGATGTCACACTGGAATTGTTAC...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCGGGCAGCTGAGGGGCTaGGGTGGTCAAAACGGGAAT +
Preference number: 4 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFGQLRG*GGQNGN
Trigger: ATTCCCGTTTTGACCACCTCAGCCCCTCAGCTGCCC...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGTGGAGGAGGAAGTCTaGTTGGTGCCTGGGATTGGC +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKVEEEV*LVPGIG
Trigger: GCCAATCCCAGGCACCAATCAGACTTCCTCCTCCAC...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp ATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTTTTGGGCTACTTCTGTaGTGGCTTCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IHKDGVGCGLAEDEGSQGFGLLL*WLQQSW
Trigger: CCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCCAAA...ACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATTTGGGCTACTTCTGTaGTGGCTTCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRFGLLL*WLQQSW
Trigger: CCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCCAAA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGGACTCTTCTCAACCTaGTCTTTCTCCCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLGLFST*SFSLMG
Trigger: GCCCATCAGGGAGAAAGAGCAGGTTGAGAAGAGTCC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCTCCCCGGCATCCGTaGTCAAGTCCCACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKAPRHP*SSPTRC
Trigger: ACAGCGAGTGGGACTTGAGCACGGATGCCGGGGAGC...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGTCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMSTQGL*SSRARS
Trigger: GGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGA...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACCAGCATACCCATCTaGAGTGCGATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQTSIPI*SAMPAA
Trigger: GGCAGCAGGCATCGCACTGCAGATGGGTATGCTGGT...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGCTACTCAGGACAGGGTaGTCTGTGGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQLLRTG*SVEDGG
Trigger: GCCACCATCCTCCACAGAGCACCCTGTCCTGAGTAG...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGTTCATGGTGGGGGTTaGCCAGGAAGGTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRVHGGG*PGRCGQ
Trigger: TTGTCCACACCTTCCTGGGCAACCCCCACCATGAAC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGTTTAAGCGGCTCTGCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRFKRLC*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGCAGAGCCGCTTAAA...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGTTTAAGCGGCTCTGCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVFKRLC*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGCAGAGCCGCTTAAA...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGTCCCCAATTATGTaGGTGGGAGAGACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPLSPIM*VGETEL
Trigger: TAGCTCAGTCTCTCCCACGCACATAATTGGGGACAG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGATTGTTGATGCTGACCTaGGCCATGGCCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRLLMLT*AMAPRA
Trigger: GGCTCTCGGGGCCATGGCCCAGGTCAGCATCAACAA...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACCCCAAGTGTGGAAGTaGTGCCTCTGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRPQVWK*CLCPDP
Trigger: GGGGTCTGGACAGAGGCACCACTTCCACACTTGGGG...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGAGGTGTAGACAGCGATaGCCACCTCACATAGCACAC +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLRCRQR*PPHIAH
Trigger: GTGTGCTATGTGAGGTGGCCATCGCTGTCTACACCT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGGAAACCAATCTCCCTaGGGATGGAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLGNQSP*GWRGAG
Trigger: TCCTGCCCCTCTCCATCCCCAGGGAGATTGGTTTCC...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGGTCATCTCTTTATCTaGCCAGATGTACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: EGSGNGHGHVLRGIGQEHGHLFI*PDVLDD
Trigger: ATCATCAAGTACATCTGGCCAGATAAAGAGATGACC...GTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGCGTTGGCTGTGGTCTaGCCGAAGATGAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRALAVV*PKMKAP
Trigger: GGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGC...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGATTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGFPGRQ*LCQEIH
Trigger: GTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAA...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGTTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLFPGRQ*LCQEIH
Trigger: GTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAA...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGACTCTCTTCACCCGTaGATTCCAGGCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLDSLHP*IPGMEK
Trigger: CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCTCTGTGGAGGATGGTaGCCTTCTGTCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLLCGGW*PSVHSH
Trigger: ATGACTATGGACAGAAGGCCACCATCCTCCACAGAG...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGTGCTCTGTGGAGGATaGTGGCCTTCTGTCCATAGT +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGVLCGG*WPSVHS
Trigger: ACTATGGACAGAAGGCCACCATCCTCCACAGAGCAC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGGACAGGGTGCTCTGTaGAGGATGGTGGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLGQGAL*RMVAFC
Trigger: ACAGAAGGCCACCATCCTCCACAGAGCACCCTGTCC...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGAAGCTACCACTGGCCTaGGGTAATGAGCACAACCCC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRKLPLA*GNEHNP
Trigger: GGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTT...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGTTGCCCAGGAAGGTGTaGACAAGGTCTGAATCTACC +
Preference number: 4 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRLPRKV*TRSEST
Trigger: GGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAA...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCCCCAATTATGTGCGTaGGAGAGACTGAGCTACACA +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPPQLCA*ERLSYT
Trigger: TGTGTAGCTCAGTCTCTCCCACGCACATAATTGGGG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTAGAGCTGGAGGAAACTaGGCGGCTCTCACGCTTACT +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLRAGGN*AALTLT
Trigger: AGTAAGCGTGAGAGCCGCTCAGTTTCCTCCAGCTCT...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGACCAGCTGGCTGGTTTaGCCTCTTCCATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKTSWLV*PLPSQR
Trigger: TCTCTGAGATGGAAGAGGTCAAACCAGCCAGCTGGT...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTGAAGGGGACTGGATTTaGGCTGTCCAGAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAEGDWI*AVQRCG
Trigger: CCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTC...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTCTATGGGAAAGAGGCTaGCAGGTTCATGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLLWERG*QVHGGG
Trigger: ACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAG...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCGTAACAATTCCAGTGTaGCATCAATGTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLAVTIPV*HQCGWP
Trigger: TGGCCAGCCACATTGATGTCACACTGGAATTGTTAC...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGTCCACTTACATCCCTTaGCCCCCGAAACACGGCACT +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQSTYIP*PPKHGT
Trigger: AGTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGA...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGAGAGGACTCCGTAGCTaGCCAGCACCCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWRGLRS*PAPTSC
Trigger: ACAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCT...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564100.5
CDS-3UTR GCA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGTTTGGGCTACTTCTGTaGTGGCTTCAGCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKFGLLL*WLQQSW
Trigger: CCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCCAAA...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTTGTGCCAGAGGCGGTTaGTCCTTCTCCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLACARGG*SFSPKV
Trigger: GACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGCTCCCCGGCATCCGTaGTCAAGTCCCACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMAPRHP*SSPTRC
Trigger: ACAGCGAGTGGGACTTGAGCACGGATGCCGGGGAGC...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACAAGTGTGGAAGTGGTaGCTCTGTCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRQVWKW*LCPDPQ
Trigger: CTGGGGGTCTGGACAGAGGCACCACTTCCACACTTG...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAACCAGCATACCCATCTaGAGTGCGATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRTSIPI*SAMPAA
Trigger: GGCAGCAGGCATCGCACTGCAGATGGGTATGCTGGT...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGCACACCTGTCAGCTTaGCACACACAGCCCATACCA +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTAHLSA*HTQPIP
Trigger: TGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGC...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCGCTATAATCTTGTCCTaGTGGTCGCCAATGATGATT +
Preference number: 4 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLAIILS*WSPMMI
Trigger: AATCATCATTGGCGACCAGCAGGACAAGATTATAGC...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGTCTTCACTTCAGGCTaGTGCATGCTGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGVFTSG*CMLLKT
Trigger: CGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGAC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGGAGGCAGTGGTTATaGCAAGAGATCCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTEGRQWL*QEIHKD
Trigger: ATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCC...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCAGCTCATTGCAGTCTCTaGCTCCTGGGTTTAAGCGGC +
Preference number: 4 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTAAHCSL*LLGLSG
Trigger: GCCGCTTAAACCCAGGAGGCAGAGACTGCAATGAGC...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGTGTGGCAGGCTCAAATaGTGCCCATCAGTGACAACC +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRCGRLK*CPSVTT
Trigger: GGTTGTCACTGATGGGCAGCATTTGAGCCTGCCACA...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCTTCTTAGATCGGACTaGCCTGAGTGGCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKLLRSD*PEWRAA
Trigger: AGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGACAGAGCTTGGTGCTGTaGCACAGACTGACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRQSLVL*HRLTEN
Trigger: GTTTTCTGTCAGTCTGTGGCACAGCACCAAGCTCTG...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCACTGGTCTGTCTCTGTaGAATGACTCCACTTACATC +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVTGLSL*NDSTYI
Trigger: GATGTAAGTGGAGTCATTGCACAGAGACAGACCAGT...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTTGGCTTCAGCAGAGCTaGAGGAAACTGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLWLQQS*RKLSGS
Trigger: AGAGCCGCTCAGTTTCCTCCAGCTCTGCTGAAGCCA...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGAGGTGTAGACAGCGATaGCCACCTCACATAGCACAC +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSRCRQR*PPHIAH
Trigger: GTGTGCTATGTGAGGTGGCCATCGCTGTCTACACCT...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp GAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGGTAAGAGAGCCCCCAGGTCATCTCTTTATCTaGCCAGATGTACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: EARPDGRALLRRLVREPPGHLFI*PDVLDD
Trigger: ATCATCAAGTACATCTGGCCAGATAAAGAGATGACC...TGGGGGCTCTCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLGQDVP*GHLFIW
Trigger: CCAGATAAAGAGATGACCCCAGGGAACATCCTGACC...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGAATGAGGCACAGCCCTaGGAAGACGAAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLNEAQP*EDEDEA
Trigger: TGCTTCATCTTCGTCTTCCCAGGGCTGTGCCTCATT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGACATAGCTCTAAGAGATaGGTTCCTGCGACCAATGGC +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGHSSKR*VPATNG
Trigger: GCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATG...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTGTCATCCCACCAGTTaGAATGATCGTGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASECHPTS*NDRGLR
Trigger: TCTTAGTCCACGATCATTCCAACTGGTGGGATGACA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGCTGTCCAGAGGTGTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCTGTCATCCCACCAGTTaGAATGATCGTGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: SCPEVWGLSLPQSLEEDVCHPTS*NDRGLR
Trigger: TCTTAGTCCACGATCATTCCAACTGGTGGGATGACA...GACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACACCTCTGGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGACTCTGTGGAGGATGGTaGCCTTCTGTCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGLCGGW*PSVHSH
Trigger: ATGACTATGGACAGAAGGCCACCATCCTCCACAGAG...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAAGGCTGACAGGTTCATaGTGGGGGTTGCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRRLTGS*WGLPRK
Trigger: CTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCT...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGAGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGGPLKA*EMSISY
Trigger: ATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCC...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCCTTTACAGAGGTTTTaGGGAAGAGGGGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTEPLQRF*GRGDKE
Trigger: TTCCTTGTCCCCTCTTCCCCAAAACCTCTGTAAAGG...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGTGGGTGGAGACCCTCTaGCTGGGTAAAGGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMWVETL*LGKGAA
Trigger: TGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCA...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
3UTR CAA 72 bp CTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGTGGTTATGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: LRDGFLRPMAKA*CSLGGSGYAKR
Trigger: TCTCTTGGCATAACCACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATCTCACGCTTACTCATaGAATGGAGCTTGGGGGATT +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRSHAYS*NGAWGI
Trigger: AATCCCCCAAGCTCCATTTCATGAGTAAGCGTGAGA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219320.9
CDS-3UTR TCA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACTGGATTCTTTCTTATaGGATCTACCGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPLDSFL*DLPTLF
Trigger: GAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAG...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGTCTGTCTCTGTGCAATaGCTCCACTTACATCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLSVSVQ*LHLHPL
Trigger: CAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGA...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCCTGAGGAAGCTACCACTGGCCTGGGGTAATGAGCACAACCCCTACTCAGGATCTCACGCTTACTCATaGAATGGAGCTTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: LLRKLPLAWGNEHNPYSGSHAYS*NGASGQ
Trigger: CTGTCCTGAAGCTCCATTTCATGAGTAAGCGTGAGA...TCCTGAGTAGGGGTTGTGCTCATTACCCCAGGCCAGTGGTAGCTTCCTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGTGCCTTACAACCACATaGCTCAGGGAGCTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQCLTTT*LRELSN
Trigger: GTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCA...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GACAGCGAGGGCTATGACCATGGCAGCTGTCACCACTCCACCCCAGGTCTTCACGCTATAATCTTGTCCTaGTGGTCGCCAATGATGATT +
Preference number: 4 (lower is better)
Translates to: DSEGYDHGSCHHSTPGLHAIILS*WSPMMI
Trigger: AATCATCATTGGCGACCAGCAGGACAAGATTATAGC...GTGAAGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGGGAGGCAGTGGTTATaGCAAGAGATCCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRGRQWL*QEIHKD
Trigger: ATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCC...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATACGCCATCCACGGCACTaGCAGGACTGGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIRHPRH*QDWGAG
Trigger: TCCTGCTCCCCAGTCCTGGCAGTGCCGTGGATGGCG...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAACGATCTCAGCTCATTaGAGTCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKTISAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGACTGCAATGAGCTGAGATCGT...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGAGGAAGTCTGATTGGTaGCTGGGATTGGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRRKSDW*LGLAKV
Trigger: CACTTTGGCCAATCCCAGGCACCAATCAGACTTCCT...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTCCTCCAACCAGCTTCTaGTTCTTAGATCGGACTGCC +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLPPTSF*FLDRTA
Trigger: GGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGTTGTTGATGCTGACCTaGGCCATGGCCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELLMLT*AMAPRA
Trigger: GGCTCTCGGGGCCATGGCCCAGGTCAGCATCAACAA...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAAGATGGCCCCAAGTGTaGAAGTGGTGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRRWPQV*KWCLCP
Trigger: TGGACAGAGGCACCACTTCCACACTTGGGGCCATCT...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGATAATCTTGTCCTGCTaGTCGCCAATGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEIILSC*SPMMIR
Trigger: CCTAATCATCATTGGCGACCAGCAGGACAAGATTAT...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACGGTCATCTCTTTATCTaGCCAGATGTACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: NGHGHVLRGIGQEHVRIHGHLFI*PDVLDD
Trigger: ATCATCAAGTACATCTGGCCAGATAAAGAGATGACC...GTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSGQDVP*GHLFIW
Trigger: CCAGATAAAGAGATGACCCCAGGGAACATCCTGACC...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGAATGAGGCACAGCCCTaGGAAGACGAAGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVNEAQP*EDEDEA
Trigger: TGCTTCATCTTCGTCTTCCCAGGGCTGTGCCTCATT...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ATGTCCGGATGTCATCCCACCAGTTGGAATGATCGTGGACTAAGAATGGCCCCACCACAAAGATGGCGTTaGCTGTGGTCTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: MSGCHPTSWNDRGLRMAPPQRWR*LWSGRR
Trigger: TCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGG...TGGGGCCATTCTTAGTCCACGATCATTCCAACTGGTGGGATGACATCCGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAAGAGATCCACAAAGATaGCGTTGGCTGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTRDPQR*RWLWSG
Trigger: GCCAGACCACAGCCAACGCCATCTTTGTGGATCTCT...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGAGGGATGCCCAGCCTaGACCATCAGGTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLEGCPA*TIRFDE
Trigger: TTCATCAAACCTGATGGTCCAGGCTGGGCATCCCTC...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGGAGGGATGCCCAGCCTaGACCATCAGGTTTGATGAA +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQEGCPA*TIRFDE
Trigger: TTCATCAAACCTGATGGTCCAGGCTGGGCATCCCTC...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGACTTCCAGGCCAGTGTaGCAGGCTCAAATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWTSRPV*QAQMLP
Trigger: GGGCAGCATTTGAGCCTGCCACACTGGCCTGGAAGT...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGAAGGGTGGGCTACTGTaGGGTAACCTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMKGGLL*GNLGRS
Trigger: GCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTT...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGCCCTCAGATCCCAACTaGAGTGTGCTCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWPSDPN*SVLPVQ
Trigger: CTGGACTGGGAGCACACTCCAGTTGGGATCTGAGGG...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGTCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCTGGATTCTTTCTTATaGGATCTACCGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKVSGRYTLILTSPAHTELDSFL*DLPTLF
Trigger: GAAGAGAGTCGGTAGATCTCATAAGAAAGAATCCAG...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCAGGTCTGAATCTACCTaGCTATGCATTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: TSVLPLEVARLLRKLPLARSEST*LCICMT
Trigger: AGTCATGCAAATGCATAGTCAGGTAGATTCAGACCT...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGGGTGTGGACAAGGTCTaGATCTACCTGACTATGCAT +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVGVDKV*IYLTMH
Trigger: ATGCATAGTCAGGTAGATTCAGACCTTGTCCACACC...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCTATGGGAAAGAGGCTaGCAGGTTCATGGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKLWERG*QVHGGG
Trigger: ACCCCCACCATGAACCTGTCAGCCTCTTTCCCATAG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGTCCACTTACATCCCTTaGCCCCCGAAACACGGCACT +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWSTYIP*PPKHGT
Trigger: AGTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGA...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGTCTGTCTCTGTGCAATaGCTCCACTTACATCCCTTG +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRSVSVQ*LHLHPL
Trigger: CAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGA...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTACTTTGCCTAAAATTTaGTGTCAGCAGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPTLPKI*CQQREE
Trigger: CTCTTCCCTCTGCTGACAGCAAATTTTAGGCAAAGT...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp ATGTCCGGATGTCATCCCACCAGTTGGAATGATCGTGGACTAAGAATGGCCCCAGGACTCTTCTCAACCTaGTCTTTCTCCCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: MSGCHPTSWNDRGLRMAPGLFST*SFSLMG
Trigger: GCCCATCAGGGAGAAAGAGCAGGTTGAGAAGAGTCC...TGGGGCCATTCTTAGTCCACGATCATTCCAACTGGTGGGATGACATCCGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCTGCCTTACAACCACATaGCTCAGGGAGCTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFCLTTT*LRELSN
Trigger: GTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCA...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLKVCGF*LTTTCL
Trigger: GAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTT...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTATCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILSTQGL*SSRARS
Trigger: GGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGA...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGACCAGCATACCCATCTaGAGTGCGATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMTSIPI*SAMPAA
Trigger: GGCAGCAGGCATCGCACTGCAGATGGGTATGCTGGT...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGGCTATAATCTTGTCCTaGTGGTCGCCAATGATGATT +
Preference number: 4 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLAIILS*WSPMMI
Trigger: AATCATCATTGGCGACCAGCAGGACAAGATTATAGC...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGGTCTTCACTTCAGGCTaGTGCATGCTGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQVFTSG*CMLLKT
Trigger: CGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGAC...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGGGCAGGCTCAAATGCTaGCCATCAGTGACAACCCAG +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWGRLKC*PSVTTQ
Trigger: CTGGGTTGTCACTGATGGGCAGCATTTGAGCCTGCC...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp ATGTCCGGATGTCATCCCACCAGTTGGAATGATCGTGGACTAAGAATGGCCCCATGTGGCAGGCTCAAATaGTGCCCATCAGTGACAACC +
Preference number: 4 (lower is better)
Translates to: MSGCHPTSWNDRGLRMAPCGRLK*CPSVTT
Trigger: GGTTGTCACTGATGGGCAGCATTTGAGCCTGCCACA...TGGGGCCATTCTTAGTCCACGATCATTCCAACTGGTGGGATGACATCCGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGTTCACTTCAGGCTGCTaGATGCTGAAATCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSFTSGC*MLKSEA
Trigger: TGCTTCGGATTTCAGCATGCAGCAGCCTGAAGTGAA...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TTATGCCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAATGGCTTCAGCAGAGCTaGAGGAAACTGAGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LCQEIHKDGVGCGLAEDEWLQQS*RKLSGS
Trigger: AGAGCCGCTCAGTTTCCTCCAGCTCTGCTGAAGCCA...TTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGGGGCTACTTCTGTGCTaGCTTCAGCAGAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKGLLLC*LQQSWR
Trigger: CCTCCAGCTCTGCTGAAGCCAGCACAGAAGTAGCCC...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGTTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: SERFSAFSITHPAASEKRFSPKV*DLILLT
Trigger: AGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAA...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGTGTTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: WPHSSKRWVPATNGKGLVFSPKV*DLILLT
Trigger: AGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAA...CACAAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGCTTCCCACTCACTCTTaGGGGCTGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKLPTHS*GLCPHR
Trigger: CCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAG...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGCTTCCCACTCACTCTTaGGGGCTGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMLPTHS*GLCPHR
Trigger: CCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAG...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGAGGTCCTCTCATTGCTaGCCTGGGAGCAGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKRSSHC*PGSSRP
Trigger: TGGCCTACTGCTCCCAGGCCAGCAATGAGAGGACCT...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCATAATCTTGTCCTGCTaGTCGCCAATGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: EVQDRVGGEHAQDDEGSGIILSC*SPMMIR
Trigger: CCTAATCATCATTGGCGACCAGCAGGACAAGATTAT...GCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGAAGCTGGCATATTTCTaGAAACCAATCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSKLAYF*KPISLG
Trigger: CCCCAGGGAGATTGGTTTCCAGAAATATGCCAGCTT...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKGQDVP*GHLFIW
Trigger: CCAGATAAAGAGATGACCCCAGGGAACATCCTGACC...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGCACCCACCAGCTGGCTaGTTTGACCTCTTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWHPPAG*FDLFHL
Trigger: GAGATGGAAGAGGTCAAACCAGCCAGCTGGTGGGTG...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGGGTTCCTGCGACCAATaGCAAAGGCCTTGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWGSCDQ*QRPCVP
Trigger: GGGAACACAAGGCCTTTGCCATTGGTCGCAGGAACC...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAATTGCCCAGGAAGGTGTaGACAAGGTCTGAATCTACC +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKLPRKV*TRSEST
Trigger: GGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAA...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTGPLKA*EMSISY
Trigger: ATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCC...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGGGGCCCCTCAAGGCCTaGGAAATGTCTATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQGPLKA*EMSISY
Trigger: ATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCC...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGACTTCCAGGCCAGTGTaGCAGGCTCAAATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKTSRPV*QAQMLP
Trigger: GGGCAGCATTTGAGCCTGCCACACTGGCCTGGAAGT...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCATCTCTTCGCCCTCTCTaGGGTAACAATTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTASLRPL*GNNSSV
Trigger: CACACTGGAATTGTTACCCCAGAGAGGGCGAAGAGA...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGCCCTCAGATCCCAACTaGAGTGTGCTCCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKPSDPN*SVLPVQ
Trigger: CTGGACTGGGAGCACACTCCAGTTGGGATCTGAGGG...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTGTCACAGTGGGTAGCTaGCAGAGCCAGAATAGAAGC +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAVTVGS*QSQNRS
Trigger: GCTTCTATTCTGGCTCTGCCAGCTACCCACTGTGAC...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATACGGCCAGGCCTCCAATaGCTGAGATCACCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIRPGLQ*LRSPCR
Trigger: TCGGCAAGGTGATCTCAGTCATTGGAGGCCTGGCCG...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCAATGCTGCCCATCAGTaGCAACCCAGCTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFNAAHQ*QPSCLF
Trigger: AAAAAGGCAGCTGGGTTGTCACTGATGGGCAGCATT...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAACACCAAGAGGGGATGTaGGAAAAGGCAGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKHQEGM*EKAVYP
Trigger: TGGATAAACTGCCTTTTCTCACATCCCCTCTTGGTG...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAGGCAAAGCGCCCAACTaGACTGCACCTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERGKAPN*TAPLPS
Trigger: GGAGGGCAGAGGTGCAGTTCAGTTGGGCGCTTTGCC...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAGCTCCCCGGCATCCGTaGTCAAGTCCCACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERAPRHP*SSPTRC
Trigger: ACAGCGAGTGGGACTTGAGCACGGATGCCGGGGAGC...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCTATAATCTTGTCCTaGTGGTCGCCAATGATGATT +
Preference number: 4 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRAIILS*WSPMMI
Trigger: AATCATCATTGGCGACCAGCAGGACAAGATTATAGC...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTGGGAGGCAGTGGTTATaGCAAGAGATCCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLGRQWL*QEIHKD
Trigger: ATCTTTGTGGATCTCTTGGCATAACCACTGCCTCCC...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGGTTCATGGTGGGGGTTaGCCAGGAAGGTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKVHGGG*PGRCGQ
Trigger: TTGTCCACACCTTCCTGGGCAACCCCCACCATGAAC...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTATGCCCTCCCGGCCAGTaGACTCACCATCTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILCPPGQ*THHLQC
Trigger: GCACTGCAGATGGTGAGTGCACTGGCCGGGAGGGCA...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGGCAGAGGGAAGAGTTTaGGCTACTTCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWAEGRV*ATSVLA
Trigger: AGCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGC...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTATAATCTTGTCCTGCTaGTCGCCAATGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: IHKDGVGCGLAEDEGSQGIILSC*SPMMIR
Trigger: CCTAATCATCATTGGCGACCAGCAGGACAAGATTAT...ACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGATAATCTTGTCCTGCTaGTCGCCAATGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLIILSC*SPMMIR
Trigger: CCTAATCATCATTGGCGACCAGCAGGACAAGATTAT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAACGACGCTCAGGAAGCTaGCATATTTCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKRRSGS*HISGNQ
Trigger: TTGGTTTCCAGAAATATGCCAGCTTCCTGAGCGTCG...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGTTTGCCCCAGTCCCTaGAAGAGGATGTCCGGATGT +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEVCPSP*KRMSGC
Trigger: ACATCCGGACATCCTCTTCCAGGGACTGGGGCAAAC...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCTTGCCCAGGAAGGTGTaGACAAGGTCTGAATCTACC +
Preference number: 4 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFLPRKV*TRSEST
Trigger: GGTAGATTCAGACCTTGTCCACACCTTCCTGGGCAA...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGAGTGTGACATCAATGTaGCTGGCCACTGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMSVTSM*LATEAR
Trigger: CCTGGCCTCAGTGGCCAGCCACATTGATGTCACACT...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGAGTCCAGCCTGGGGTTaGAGCCCTGAGATAGAAAGG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKSPAWG*SPEIER
Trigger: CCTTTCTATCTCAGGGCTCCAACCCCAGGCTGGACT...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
3UTR CAA 72 bp GGCTGGTTTGACCTCTTCCATCTCAGAGAGTTTGGCTaGAATGAGGCACAGCCCTGGGAAGACGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: GWFDLFHLREFG*NEAQPWEDEDE
Trigger: TTCATCTTCGTCTTCCCAGGGCTGTGCCTCATTCAAGCCAAACTCTCTGAGATGGAAGAGGTCAAACCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR TCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAAGGCTGCTGGGAAGTTaGGTAACCCTGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERRLLGS*VTLHPG
Trigger: GCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCT...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR TCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGTAGAAAAGAAACAGTaGAGTACCCCGATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRVEKKQ*STPIGR
Trigger: CCTCCCTATCGGGGTACTTCACTGTTTCTTTTCTAC...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGACATGTCTGCCATGTGTaGGGGAGGGGAGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERHVCHV*GRGEQC
Trigger: GCACTGCTCTCCCCTCCCTCACACATGGCAGACATG...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGACTCCCTGATGGGCTGTaGCAGAGGCGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERLPDGL*QRRLLL
Trigger: AAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAG...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp TTATGCCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: LCQEIHKDGVGCGLAEDEKVCGF*LTTTCL
Trigger: GAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTT...TTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAACTGGTCTGTCTCTGTaGAATGACTCCACTTACATC +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTTGLSL*NDSTYI
Trigger: GATGTAAGTGGAGTCATTGCACAGAGACAGACCAGT...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTAACTCACCATCTGCAGTaGGATGCCTGCTGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILTHHLQ*DACCHA
Trigger: GGCGTGGCAGCAGGCATCGCACTGCAGATGGTGAGT...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAACTGAACTGCACCTCTaGCCTCCCGGCCAGTGCACT +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERTELHL*PPGQCT
Trigger: AGTGCACTGGCCGGGAGGGCAGAGGTGCAGTTCAGT...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp TTATGCCAAGAGATCCACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAATTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: LCQEIHKDGVGCGLAEDEFLQGL*VLPYNH
Trigger: GTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAA...TTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGATCTCTTGGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTATTGTTGATGCTGACCTaGGCCATGGCCCCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILLLMLT*AMAPRA
Trigger: GGCTCTCGGGGCCATGGCCCAGGTCAGCATCAACAA...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGACCCCAAGTGTGGAAGTaGTGCCTCTGTCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERPQVWK*CLCPDP
Trigger: GGGGTCTGGACAGAGGCACCACTTCCACACTTGGGG...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAGGAAACCAATCTCCCTaGGGATGGAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIGNQSP*GWRGAG
Trigger: TCCTGCCCCTCTCCATCCCCAGGGAGATTGGTTTCC...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGTTCCCTGGGAGGCAGTaGTTATGCCAAGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEFPGRQ*LCQEIH
Trigger: GTGGATCTCTTGGCATAACCACTGCCTCCCAGGGAA...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCATAGCTCTAAGAGATaGGTTCCTGCGACCAATGGC +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKHSSKR*VPATNG
Trigger: GCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAATGTCATCCCACCAGTTaGAATGATCGTGGACTAAGA +
Preference number: 4 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKCHPTS*NDRGLR
Trigger: TCTTAGTCCACGATCATTCCAACTGGTGGGATGACA...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGACTCTCTTCACCCGTaGATTCCAGGCATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMDSLHP*IPGMEK
Trigger: CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTC...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CTCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGATACTCCCAACCTTATaGGGAAAGCTAACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LCGGWWPSVHSHSPEGSQILPTL*GKLTEE
Trigger: TTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTAT...CTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGTCCCACCAGTTGGAATaGTCGTGGACTAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKSHQLE*SWTKNG
Trigger: GCCATTCTTAGTCCACGATCATTCCAACTGGTGGGA...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAAGGTCTGAATCTACCTaGCTATGCATTTGCATGACT +
Preference number: 4 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTRSEST*LCICMT
Trigger: AGTCATGCAAATGCATAGTCAGGTAGATTCAGACCT...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATACCCACACAGAGGGTCTaGAAGGTTCTCAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIPTQRV*KVLSLL
Trigger: GAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTGGG...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGAATGCTGCCCATCAGTaGCAACCCAGCTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTENAAHQ*QPSCLF
Trigger: AAAAAGGCAGCTGGGTTGTCACTGATGGGCAGCATT...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR TCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTACTTACTGGCCATCCCTaGCCCGAAGCCTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILLTGHP*PEASLL
Trigger: CAAAAGGGAGGCTTCGGGTCAGGGATGGCCAGTAAG...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGATGTGCCAGAGGCGGTTaGTCCTTCTCCCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERCARGG*SFSPKV
Trigger: GACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTACAAGTGTGGAAGTGGTaGCTCTGTCCAGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILQVWKW*LCPDPQ
Trigger: CTGGGGGTCTGGACAGAGGCACCACTTCCACACTTG...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAGCACACCTGTCAGCTTaGCACACACAGCCCATACCA +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIAHLSA*HTQPIP
Trigger: TGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGC...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGGTCTTCACTTCAGGCTaGTGCATGCTGTTGAAGACG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKVFTSG*CMLLKT
Trigger: CGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGAC...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGCTGTCCCCAATTATGTaGGTGGGAGAGACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELSPIM*VGETEL
Trigger: TAGCTCAGTCTCTCCCACGCACATAATTGGGGACAG...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAAGTGCACTCACCATCTaGAGTGCGATGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERSALTI*SAMPAA
Trigger: GGCAGCAGGCATCGCACTGCAGATGGTGAGTGCACT...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTAGGGAGGGGAGAGCAGTaGGTGTATCACTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILGRGEQ*VYHLLA
Trigger: GGCCAGTAAGTGATACACGCACTGCTCTCCCCTCCC...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACGCTTACTCATGAAATaGAGCTTGGGGGATTCTTTC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRRLLMK*SLGDSF
Trigger: GAAAGAATCCCCCAAGCTCCATTTCATGAGTAAGCG...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219320.9
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGTTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKFLQGL*VLPYNH
Trigger: GTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAA...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGACTTCCCACTCACTCTTaGGGGCTGTGTCCACACAGG +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERLPTHS*GLCPHR
Trigger: CCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAG...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGAAGCTGGCATATTTCTaGAAACCAATCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWKLAYF*KPISLG
Trigger: CCCCAGGGAGATTGGTTTCCAGAAATATGCCAGCTT...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGCGACGCTCAGGAAGCTaGCATATTTCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWRRSGS*HISGNQ
Trigger: TTGGTTTCCAGAAATATGCCAGCTTCCTGAGCGTCG...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGCGACGCTCAGGAAGCTaGCATATTTCTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKRRSGS*HISGNQ
Trigger: TTGGTTTCCAGAAATATGCCAGCTTCCTGAGCGTCG...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGCTCTGTGGAGGATGGTaGCCTTCTGTCCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELCGGW*PSVHSH
Trigger: ATGACTATGGACAGAAGGCCACCATCCTCCACAGAG...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGTAGAAAAGAAACAGTaGAGTACCCCGATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEVEKKQ*STPIGR
Trigger: CCTCCCTATCGGGGTACTTCACTGTTTCTTTTCTAC...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAGCAGAGGGAAGAGTTTaGGCTACTTCTGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIAEGRV*ATSVLA
Trigger: AGCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGC...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAAGATGGCCCCAAGTGTaGAAGTGGTGCCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERRWPQV*KWCLCP
Trigger: TGGACAGAGGCACCACTTCCACACTTGGGGCCATCT...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAATAATCTTGTCCTGCTaGTCGCCAATGATGATTAGG +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRIILSC*SPMMIR
Trigger: CCTAATCATCATTGGCGACCAGCAGGACAAGATTAT...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGAAGCTGGCATATTTCTaGAAACCAATCTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKKLAYF*KPISLG
Trigger: CCCCAGGGAGATTGGTTTCCAGAAATATGCCAGCTT...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAAGAGATCCACAAAGATaGCGTTGGCTGTGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIRDPQR*RWLWSG
Trigger: GCCAGACCACAGCCAACGCCATCTTTGTGGATCTCT...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTTCTTTCTCAAGACTTTaGCTAAAATTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLSFSRL*LKFAVS
Trigger: GCTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGA...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTAGGACTCTTCTCAACCTaGTCTTTCTCCCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILGLFST*SFSLMG
Trigger: GCCCATCAGGGAGAAAGAGCAGGTTGAGAAGAGTCC...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGATGCCTTACAACCACATaGCTCAGGGAGCTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERCLTTT*LRELSN
Trigger: GTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCA...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR GCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIKVCGF*LTTTCL
Trigger: GAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTT...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTGGTCATCTCTTTATCTaGCCAGATGTACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAGHLFI*PDVLDD
Trigger: ATCATCAAGTACATCTGGCCAGATAAAGAGATGACC...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATACATAGCTCTAAGAGATaGGTTCCTGCGACCAATGGC +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIHSSKR*VPATNG
Trigger: GCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATG...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR TCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATATCTCACGCTTACTCATaGAATGGAGCTTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGISHAYS*NGASGQ
Trigger: CTGTCCTGAAGCTCCATTTCATGAGTAAGCGTGAGA...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGATCTTTCTCAAGACTTTaGCTAAAATTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SVEDGGLLSIVILQREVRSFSRL*LKFAVS
Trigger: GCTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGA...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CACCCACCAGCTGGCTGGTTTGACCTCTTCCATCTCAGAGAGTTTGGCTTGAATTCTTTCTCAAGACTTTaGCTAAAATTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: HPPAGWFDLFHLREFGLNSFSRL*LKFAVS
Trigger: GCTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGA...ATTCAAGCCAAACTCTCTGAGATGGAAGAGGTCAAACCAGCCAGCTGGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR GCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERKVCGF*LTTTCL
Trigger: GAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTT...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTATTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCAC +
Preference number: 4 (lower is better)
Translates to: SDCWKASEASFGSQERILFLQGL*VLPYNH
Trigger: GTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAA...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR TCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGATTGTTGGAAGGCTTCTaGAGCCTCATTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERLLEGF*SLIWVT
Trigger: TGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAA...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGATTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: NFSDCWKASEASFGSQERFSPKV*DLILLT
Trigger: AGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAA...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CCA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGGTCATCTCTTTATCTaGCCAGATGTACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEGHLFI*PDVLDD
Trigger: ATCATCAAGTACATCTGGCCAGATAAAGAGATGACC...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CCA 90 bp TCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGAATAATACTCCCAACCTTATaGGGAAAGCTAACGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SDTKADTPNLMGKANGGIILPTL*GKLTEE
Trigger: TTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTAT...TATTCCTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR GCA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGTCTTTCTCAAGACTTTaGCTAAAATTTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LKAWEMSISYGKEADRFMSFSRL*LKFAVS
Trigger: GCTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGA...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp GGGCGGGGCGATTCCCAGGCCTGGAGCGAGAAGGGTGGGCTACTGTaGGGTAACCTGGGGAGGAGCTCCGGGACCCGATCCCGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: GRGDSQAWSEKGGLL*GNLGRSSGTRSRPR
Trigger: CCTAGGCCGGGATCGGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTTCTCGCTCCAGGCCTGGGAATCGCCCCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp TCCGGGACCCGATCCCGGCCTAGGACTGGGTGGAGACCCTCTGGCTaGGTAAAGGCGCGGCAGAGCTGGCGCAACAGAGGGACGGGCGTG +
Preference number: 5 (lower is better)
Translates to: SGTRSRPRTGWRPSG*VKARQSWRNRGTGV
Trigger: CACGCCCGTCCCTCTGTTGCGCCAGCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCGGGATCGGGTCCCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp AGGACTGGGTGGAGACCCTCTGGCTGGGTAAAGGCGCGGCAGAGCTaGCGCAACAGAGGGACGGGCGTGGGGCGAGGACGCCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: RTGWRPSGWVKARQS*RNRGTGVGRGRQDL
Trigger: CAGATCCTGGCGTCCTCGCCCCACGCCCGTCCCTCTGTTGCGCCAGCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCAGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp AACCTGGGGAGGAGCTCCGGGACCCGATCCCGGCCTAGGACTGGGTaGAGACCCTCTGGCTGGGTAAAGGCGCGGCAGAGCTGGCGCAAC +
Preference number: 5 (lower is better)
Translates to: NLGRSSGTRSRPRTG*RPSGWVKARQSWRN
Trigger: GTTGCGCCAGCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCGGGATCGGGTCCCGGAGCTCCTCCCCAGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS GCA 90 bp GAGGCTTCCCACTCACTCTTGGGGGCTGTGTCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCCCCGGCATCCGTGCTCAAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: EASHSLLGAVSTQGL*SSRARSPASVLKSH
Trigger: GTGGGACTTGAGCACGGATGCCGGGGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGACACAGCCCCCAAGAGTGAGTGGGAAGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS CCA 90 bp ATTCCCAGGCCTGGAGCGAGAAGGGTGGGCTACTGTGGGGTAACCTaGGGAGGAGCTCCGGGACCCGATCCCGGCCTAGGACTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: IPRPGARRVGYCGVT*GGAPGPDPGLGLGG
Trigger: TCCACCCAGTCCTAGGCCGGGATCGGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTTCTCGCTCCAGGCCTGGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGGCACCCAGGCACGCGTaGACGACGATGAAGATGGCC +
Preference number: 5 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWAPRHA*TTMKMA
Trigger: GGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGC...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TSVLPLEVARLLRKLPLAGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACGCACCCAGGCACGCGTaGACGACGATGAAGATGGCC +
Preference number: 5 (lower is better)
Translates to: NGHGHVLRGIGQEHVRIHAPRHA*TTMKMA
Trigger: GGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGC...GTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp TTGACCCCCGAAACACGGCACTGGGGGACTGCAGCCCTGCTGACCAGGCTGTCCCACGATCTCAGCTCATaGCAGTCTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LTPETRHWGTAALLTRLSHDLSS*QSLPPG
Trigger: CCCAGGAGGCAGAGACTGCAATGAGCTGAGATCGTG...GGACAGCCTGGTCAGCAGGGCTGCAGTCCCCCAGTGCCGTGTTTCGGGGGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS GCA 90 bp CGAAGCCTCCCTTTTGAGGCAAAGCGCCCAACTGAACTGCACCTCTaGCCTCCCGGCCAGTGCACTCACCATCTGCAGTGCGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: RSLPFEAKRPTELHL*PPGQCTHHLQCDAC
Trigger: GCAGGCATCGCACTGCAGATGGTGAGTGCACTGGCCGGGAGGGCAGAGGTGCAGTTCAGTTGGGCGCTTTGCCTCAAAAGGGAGGCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CAA 90 bp GGCTGTCCTCCTAGCCCTGTCAGGGACTGGTGCTGGCAGAGCTTGGTGCTGTGCAAGGCTGCTGGGAAGTaGAGTAACCCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: GCPPSPVRDWCWQSLVLCKAAGK*SNPAPR
Trigger: CCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTT...GCACAGCACCAAGCTCTGCCAGCACCAGTCCCTGACAGGGCTAGGAGGACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: DDEGSGNGHGHVLRGIGQGCCML*KTGTLL
Trigger: CAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCC...CTGTCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS-3UTR CAA 90 bp CCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCACCGTTTGTAAACCTCAGAGAGTTTGGCTaGAATGAGGCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PWHGTALGFRAGLAPFVNLREFG*NEAQPW
Trigger: CCAGGGCTGTGCCTCATTCAAGCCAAACTCTCTGAG...GTTTACAAACGGTGCCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: GGEHAQDDEGSGNGHGHVPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...GACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS GCA 90 bp GGGCCATGGCCCCGAGAGCCTTCTTCCTGCAAGGTCTGTGGGTTCTaGCTTACAACCACATGCCTCAGGGAGCTGAGCAACACCCACCTG +
Preference number: 5 (lower is better)
Translates to: GPWPREPSSCKVCGF*LTTTCLRELSNTHL
Trigger: CAGGTGGGTGTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAAGAAGGCTCTCGGGGCCATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCAAGGCTGCTGGGAAGTaGAGTAACCCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLKAAGK*SNPAPR
Trigger: CCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTT...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp CAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGAAGCACACCTGTCAGCTaGCCACACACAGCCCATACC +
Preference number: 5 (lower is better)
Translates to: QDDEGSGNGHGHVLRGIGSTPVS*PHTAHT
Trigger: GGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCT...TCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp CGGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGAGGCTGATGGTGAACTaGCGGTCTGTGTACCAAGGG +
Preference number: 5 (lower is better)
Translates to: RPRPCPPRDRTGARQDPQRLMVN*RSVYQG
Trigger: CCCTTGGTACACAGACCGCAAGTTCACCATCAGCCT...CTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGATGGTGGGCATGGCATaGAACACAGCCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWMVGMA*NTAIQE
Trigger: TTCCTGGATGGCTGTGTTCAATGCCATGCCCACCAT...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGGTGTGGGGCCTGAGTTaGCCCCAGTCCCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRVWGLS*PQSLEE
Trigger: CTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACAC...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGCCGGGCTGGCCTGGACCATCAGGTTaGATGAAAGAGACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: EYSQHRGTGRPLASEPGWPGPSG*MKETGW
Trigger: CCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGG...CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS TCA 90 bp CTGACCAGCACCCACCAGCTGTCCCCATGTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCACTCCACCCCAGGTCTTCACTTCAG +
Preference number: 5 (lower is better)
Translates to: LTSTHQLSPCRQRGL*PWQLSPLHPRSSLQ
Trigger: CTGAAGTGAAGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACAGCTGGTGGGTGCTGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564100.5
CDS CCA 90 bp CTGACCTGGGCCATGGCCCCGAGAGCCTTCTTCCTGCAAGGTCTGTaGGTTCTGCCTTACAACCACATGCCTCAGGGAGCTGAGCAACAC +
Preference number: 5 (lower is better)
Translates to: LTWAMAPRAFFLQGL*VLPYNHMPQGAEQH
Trigger: GTGTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGAAGAAGGCTCTCGGGGCCATGGCCCAGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS CCA 90 bp TGTAGGCCCCTCAGATCCCAACTGGAGTGTGCTCCCAGTCCAGCCTaGGGTTGGAGCCCTGAGATAGAAAGGGTGGGCTGCTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: CRPLRSQLECAPSPA*GWSPEIERVGCFVR
Trigger: CCTCACAAAGCAGCCCACCCTTTCTATCTCAGGGCTCCAACCCCAGGCTGGACTGGGAGCACACTCCAGTTGGGATCTGAGGGGCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGAGCACACCTGTCAGCTaGCCACACACAGCCCATACC +
Preference number: 5 (lower is better)
Translates to: LTEEYSQHRGTGRPLASESTPVS*PHTAHT
Trigger: GGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCT...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCATGGTGGGCATGGCATaGAACACAGCCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GGEHAQDDEGSGNGHGHVMVGMA*NTAIQE
Trigger: TTCCTGGATGGCTGTGTTCAATGCCATGCCCACCAT...GACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp ATGTGGCTGGCCACTGAGGCCAGGCCTGATGGACGTGCGTTGCTGAGGAGGCTGATGGTGGGCATGGCATaGAACACAGCCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: MWLATEARPDGRALLRRLMVGMA*NTAIQE
Trigger: TTCCTGGATGGCTGTGTTCAATGCCATGCCCACCAT...CAGCCTCCTCAGCAACGCACGTCCATCAGGCCTGGCCTCAGTGGCCAGCCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLGCCML*KTGTLL
Trigger: CAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCC...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATAGGACTCAGAGAGTTTGGCTaGAATGAGGCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: QDDEGSGNGHGHVLRGIGLREFG*NEAQPW
Trigger: CCAGGGCTGTGCCTCATTCAAGCCAAACTCTCTGAG...TCCTATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp AGGCACAGCCCTGGGAAGACGAAGATGAAGCAGGCGGCCAGGCCTCCAATGACTTCCACAAAGATGGCGTaGGCTGTGGTCTGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: RHSPGKTKMKQAARPPMTSTKMA*AVVWPK
Trigger: CTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGA...AGTCATTGGAGGCCTGGCCGCCTGCTTCATCTTCGTCTTCCCAGGGCTGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp CAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCCCATCTCAGACCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: QPSPSPTLRPLKRGAHLRPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...TCTGAGATGGGCCCCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS TCA 90 bp GTGAGGGAGGGGAGAGCAGTGCGTGTATCACTTACTGGCCATCCCTaGCCCGAAGCCTCCCTTTTGAGGCAAAGCGCCCAACTGAACTGC +
Preference number: 5 (lower is better)
Translates to: VREGRAVRVSLTGHP*PEASLLRQSAQLNC
Trigger: GCAGTTCAGTTGGGCGCTTTGCCTCAAAAGGGAGGCTTCGGGTCAGGGATGGCCAGTAAGTGATACACGCACTGCTCTCCCCTCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS GCA 90 bp ACCATGGCAGCTGTCACCACTCCACCCCAGGTCTTCACTTCAGGCTaGTGCATGCTGTTGAAGACGGGCACACTGCTGACGTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: TMAAVTTPPQVFTSG*CMLLKTGTLLTWHC
Trigger: ACAGTGCCACGTCAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGACCTGGGGTGGAGTGGTGACAGCTGCCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566953.5
ENST00000569209.1
CDS CCA 90 bp TCTGCCATGTGTGAGGGAGGGGAGAGCAGTGCGTGTATCACTTACTaGCCATCCCTGACCCGAAGCCTCCCTTTTGAGGCAAAGCGCCCA +
Preference number: 5 (lower is better)
Translates to: SAMCEGGESSACITY*PSLTRSLPFEAKRP
Trigger: TGGGCGCTTTGCCTCAAAAGGGAGGCTTCGGGTCAGGGATGGCCAGTAAGTGATACACGCACTGCTCTCCCCTCCCTCACACATGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CAA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCAAGCAGAGGGAAGAGTTaGGGCTACTTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPSRGKS*GYFCAG
Trigger: GCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGCT...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGCTCCCAGGGTGACCAAGAGGACTCCGTAGCTGACCAGCACCCACCAGCTGGCATCACAGCTATAATCTaGTCCTGCTGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: GSQGDQEDSVADQHPPAGITAII*SCWSPM
Trigger: CATTGGCGACCAGCAGGACAAGATTATAGCTGTGAT...GCCAGCTGGTGGGTGCTGGTCAGCTACGGAGTCCTCTTGGTCACCCTGGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LKAWEMSISYGKEADRFMGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGGGCACGGGACGGCCCTaGGCTTCAGAGCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEGTGRP*ASEPGW
Trigger: CCAGCCCGGCTCTGAAGCCAAGGGCCGTCCCGTGCC...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGAGCCTGATGGACGTGCGTaGCTGAGGAGGCTGGTAAGA +
Preference number: 5 (lower is better)
Translates to: KKVSGRYTLILTSPAHTEPDGRA*LRRLVR
Trigger: TCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGG...CTCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp CACACAGAGGGTCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCCTGATGGACGTGCGTaGCTGAGGAGGCTGGTAAGA +
Preference number: 5 (lower is better)
Translates to: HTEGLKGSQPSPSPTLRPPDGRA*LRRLVR
Trigger: TCTTACCAGCCTCCTCAGCAACGCACGTCCATCAGG...AGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGACCCTCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp ACTTCAGTGCTACCGTTGGAAGTGGCCAGGCTCCTGAGGAAGCTACCACTGGCCCTCCACTTACATCCCTaGACCCCCGAAACACGGCAC +
Preference number: 5 (lower is better)
Translates to: TSVLPLEVARLLRKLPLALHLHP*TPETRH
Trigger: GTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAG...GGCCAGTGGTAGCTTCCTCAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS TCA 90 bp CATGCTGTTGAAGACGGGCACACTGCTGACGTGGCACTGTCCAGGTaGAGGGCACCGTCATGGTGGGGAAATGACCTCAACCCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HAVEDGHTADVALSR*RAPSWWGNDLNPSF
Trigger: GAAACTGGGGTTGAGGTCATTTCCCCACCATGACGGTGCCCTTCACCTGGACAGTGCCACGTCAGCAGTGTGCCCGTCTTCAACAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566953.5
ENST00000569209.1
CDS-3UTR CAA 90 bp CCTCCAATGACTGAGATCACCTTGCCGATGTCAGGGATGAAGAGCGCCAGCAGCAAGGCTGCTGGGAAGTaGAGTAACCCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: PPMTEITLPMSGMKSASSKAAGK*SNPAPR
Trigger: CCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTT...GCTGCTGGCGCTCTTCATCCCTGACATCGGCAAGGTGATCTCAGTCATTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGAGCACACCTGTCAGCTaGCCACACACAGCCCATACC +
Preference number: 5 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLSTPVS*PHTAHT
Trigger: GGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGCCACGGCCATGTCCTCCGAGGGATAGGACAGGAGCACGTCAGGATCCACAGCATCACAGCTATAATCTaGTCCTGCTGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: GHGHVLRGIGQEHVRIHSITAII*SCWSPM
Trigger: CATTGGCGACCAGCAGGACAAGATTATAGCTGTGAT...GCTGTGGATCCTGACGTGCTCCTGTCCTATCCCTCGGAGGACATGGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp TCTGAAAGGTTCTCAGCCTTCTCCATCACCCACCCTGCGGCCTCTGAAAAGAGGGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: SERFSAFSITHPAASEKRGCCML*KTGTLL
Trigger: CAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCC...CCTCTTTTCAGAGGCCGCAGGGTGGGTGATGGAGAAGGCTGAGAACCTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATCCACAAAGATGGCGTaGGCTGTGGTCTGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRSTKMA*AVVWPK
Trigger: CTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GTCTGTCTCTGTGCAATGACTCCACTTACATCCCTTGACCCCCGAAACACGGCAGTGTGGGGCCTGAGTTaGCCCCAGTCCCTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VCLCAMTPLTSLDPRNTAVWGLS*PQSLEE
Trigger: CTCTTCCAGGGACTGGGGCAAACTCAGGCCCCACAC...TGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAGTCATTGCACAGAGACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGGATTGGTGCCTGGGATaGGCCAAAGTGAGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKDWCLG*AKVRGG
Trigger: GCCCCCTCTCACTTTGGCCAATCCCAGGCACCAATC...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATACAACATAGTGAGACCTaGTCTCTGCTGTCCCCATGT +
Preference number: 5 (lower is better)
Translates to: AQDDEGSGNGHGHVLRGIQHSET*SLLSPC
Trigger: ACATGGGGACAGCAGAGACAAGGTCTCACTATGTTG...TATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS TCA 90 bp AGTGAGACCTTGTCTCTGCTGTCCCCATGTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCACTCCACCCCAGGTCTTCACTTCAG +
Preference number: 5 (lower is better)
Translates to: SETLSLLSPCRQRGL*PWQLSPLHPRSSLQ
Trigger: CTGAAGTGAAGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACAGCAGAGACAAGGTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS GCA 90 bp AGGTGTAGACAGCGATGGCCACCTCACATAGCACACCTGTCAGCTTaGCACACACAGCCCATACCACCTCCTGGTAGGTCCTCTCATTGC +
Preference number: 5 (lower is better)
Translates to: RCRQRWPPHIAHLSA*HTQPIPPPGRSSHC
Trigger: GCAATGAGAGGACCTACCAGGAGGTGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCTATGTGAGGTGGCCATCGCTGTCTACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000564010.5
ENST00000564100.5
ENST00000566598.5
ENST00000570101.5
CDS GCA 90 bp CAGGAAGCTGCCGGGAAGGAGAGACTAAGTGTCCTCATCCCCAGCTaGCTCTTATCTGATTCCACCCCTAGGGACATCCACCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QEAAGKERLSVLIPS*LLSDSTPRDIHLQL
Trigger: GAGCTGAAGGTGGATGTCCCTAGGGGTGGAATCAGATAAGAGGCAGCTGGGGATGAGGACACTTAGTCTCTCCTTCCCGGCAGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569209.1
CDS-3UTR CAA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGCACCCAGGCACGCGTaGACGACGATGAAGATGGCC +
Preference number: 5 (lower is better)
Translates to: SVEDGGLLSIVILQREVRAPRHA*TTMKMA
Trigger: GGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGC...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GCTCAGGATGATGAAGGCTCGGGCAACGGCCACGGCCATGTCCTCCGAGGGATATCTGGCCAGATGTACTaGATGATAACGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AQDDEGSGNGHGHVLRGISGQMY*MITMAV
Trigger: CACAGCCATCGTTATCATCAAGTACATCTGGCCAGA...TATCCCTCGGAGGACATGGCCGTGGCCGTTGCCCGAGCCTTCATCATCCTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp GGAGCAGGAAGGGGACTGGATTTGAGCTGTCCAGAGGTGTGGGGCCTGAGTTTGATGGTGGGCATGGCATaGAACACAGCCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: GAGRGLDLSCPEVWGLSLMVGMA*NTAIQE
Trigger: TTCCTGGATGGCTGTGTTCAATGCCATGCCCACCAT...CAAACTCAGGCCCCACACCTCTGGACAGCTCAAATCCAGTCCCCTTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGGGCATGGTGGGCATGGCATaGAACACAGCCATCCAGGAA +
Preference number: 5 (lower is better)
Translates to: EVQDRVGGEHAQDDEGSGMVGMA*NTAIQE
Trigger: TTCCTGGATGGCTGTGTTCAATGCCATGCCCACCAT...GCCCGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp GAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGTCCACAAAGATGGCGTaGGCTGTGGTCTGGCCGAAG +
Preference number: 5 (lower is better)
Translates to: ETGWGPSRPGKCLLAMGKSTKMA*AVVWPK
Trigger: CTTCGGCCAGACCACAGCCAACGCCATCTTTGTGGA...CTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp GGAACTCAGAAGCTGGGGGTCCCACCTCTTGCAGATTCTCTGCCTTaGTTAAGACCTCTCGGCACCCCCACTGCTCACTGGCAAATTACT +
Preference number: 5 (lower is better)
Translates to: GTQKLGVPPLADSLP*LRPLGTPTAHWQIT
Trigger: AGTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAATCTGCAAGAGGTGGGACCCCCAGCTTCTGAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS-3UTR CAA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTAGCACACCTGTCAGCTaGCCACACACAGCCCATACC +
Preference number: 5 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLSTPVS*PHTAHT
Trigger: GGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCT...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGAGGCTGATGGTGAACTaGCGGTCTGTGTACCAAGGG +
Preference number: 5 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSRLMVN*RSVYQG
Trigger: CCCTTGGTACACAGACCGCAAGTTCACCATCAGCCT...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565785.5
ENST00000566598.5
CDS-3UTR CAA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTCTGGCCAGATGTACTaGATGATAACGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LTEEYSQHRGTGRPLASESGQMY*MITMAV
Trigger: CACAGCCATCGTTATCATCAAGTACATCTGGCCAGA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTG +
Preference number: 5 (lower is better)
Translates to: SVEDGGLLSIVILQREVRGCCML*KTGTLL
Trigger: CAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCC...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTCCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAACTTCAGTGCTACCGTaGGAAGTGGCCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTTSVLP*EVARLL
Trigger: CAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAACTTCAGTGCTACCGTaGGAAGTGGCCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RDRVGPLKAWEMSISYGKTSVLP*EVARLL
Trigger: CAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT...TTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CCTCCAACCAGCTTCTGCTTCTTAGATCGGACTGCCCTGAGTGGCGGGCGGCTCTACCTGACTATGCATTaGCATGACTTCAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: PPTSFCFLDRTALSGGRLYLTMH*HDFSAT
Trigger: GGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTA...GAGCCGCCCGCCACTCAGGGCAGTCCGATCTAAGAAGCAGAAGCTGGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGAGATTGGTGCCTGGGATaGGCCAAAGTGAGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SVEDGGLLSIVILQREVRDWCLG*AKVRGG
Trigger: GCCCCCTCTCACTTTGGCCAATCCCAGGCACCAATC...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTAGCAGAGGGAAGAGTTaGGGCTACTTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLSRGKS*GYFCAG
Trigger: GCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGCT...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGCACCCAGGCACGCGTaGACGACGATGAAGATGGCC +
Preference number: 5 (lower is better)
Translates to: LKAWEMSISYGKEADRFMAPRHA*TTMKMA
Trigger: GGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGC...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGAAAGAGGCTGACAGGTTCATGGTGGGGGTTGCCCAGGAAGGTGTGGACAAGGATCACAGCTATAATCTaGTCCTGCTGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: GKRLTGSWWGLPRKVWTRITAII*SCWSPM
Trigger: CATTGGCGACCAGCAGGACAAGATTATAGCTGTGAT...CCTTGTCCACACCTTCCTGGGCAACCCCCACCATGAACCTGTCAGCCTCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp ACAAAGATGGCGTTGGCTGTGGTCTGGCCGAAGATGAAGGCTCCCAGGGTGACCTCTGGCCAGATGTACTaGATGATAACGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TKMALAVVWPKMKAPRVTSGQMY*MITMAV
Trigger: CACAGCCATCGTTATCATCAAGTACATCTGGCCAGA...GGTCACCCTGGGAGCCTTCATCTTCGGCCAGACCACAGCCAACGCCATCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp GAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGGCCTTCTCAGAGAGTTTGGCTaGAATGAGGCACAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EWPHSSKRWVPATNGKGLLREFG*NEAQPW
Trigger: CCAGGGCTGTGCCTCATTCAAGCCAAACTCTCTGAG...AAGGCCTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACCAATGGCAAAGGCCTaGTGTTCCCTGGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SVEDGGLLSIVILQREVRPMAKA*CSLGGS
Trigger: ACTGCCTCCCAGGGAACACAAGGCCTTTGCCATTGG...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CTAACGGAGGAATACTCACAGCACCGTGGCACGGGACGGCCCTTGGCTTCAGAGTACCTGACTATGCATTaGCATGACTTCAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: LTEEYSQHRGTGRPLASEYLTMH*HDFSAT
Trigger: GGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTA...CTCTGAAGCCAAGGGCCGTCCCGTGCCACGGTGCTGTGAGTATTCCTCCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTCACGATCTCAGCTCATaGCAGTCTCTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LMKETGWGPSRPGKCLLAHDLSS*QSLPPG
Trigger: CCCAGGAGGCAGAGACTGCAATGAGCTGAGATCGTG...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp TCTGTGGAGGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTCCACTTACATCCCTaGACCCCCGAAACACGGCAC +
Preference number: 5 (lower is better)
Translates to: SVEDGGLLSIVILQREVRLHLHP*TPETRH
Trigger: GTGCCGTGTTTCGGGGGTCAAGGGATGTAAGTGGAG...TCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCCTCCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS CCA 90 bp GGAAGCCGGCCTGGTCAGGATGTTCCCTGGGGTCATCTCTTTATCTaGCCAGATGTACTTGATGATAACGATGGCTGTGACGTACCAGGT +
Preference number: 5 (lower is better)
Translates to: GSRPGQDVPWGHLFI*PDVLDDNDGCDVPG
Trigger: ACCTGGTACGTCACAGCCATCGTTATCATCAAGTACATCTGGCCAGATAAAGAGATGACCCCAGGGAACATCCTGACCAGGCCGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000564010.5
ENST00000564100.5
ENST00000565785.5
ENST00000566598.5
ENST00000569209.1
ENST00000570101.5
ENST00000570214.5
CDS CCA 90 bp GGCACCGACTCTTTTCTACAGGCTTCAGTTTCTCCTTCTACAGGATaGGGTCCACACAAGGCCAAAGGACCATGTTGGAAGCGCTCACAG +
Preference number: 5 (lower is better)
Translates to: GTDSFLQASVSPSTG*GPHKAKGPCWKRSQ
Trigger: CTGTGAGCGCTTCCAACATGGTCCTTTGGCCTTGTGTGGACCCCATCCTGTAGAAGGAGAAACTGAAGCCTGTAGAAAAGAGTCGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562149.5
CDS-3UTR CAA 90 bp CTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCACCAGTTGATCACAGCTATAATCTaGTCCTGCTGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: LSLPQSLEEDVRMSSHQLITAII*SCWSPM
Trigger: CATTGGCGACCAGCAGGACAAGATTATAGCTGTGAT...CAACTGGTGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TTGATGAAAGAGACAGGGTGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTAGGCTGATGGTGAACTaGCGGTCTGTGTACCAAGGG +
Preference number: 5 (lower is better)
Translates to: LMKETGWGPSRPGKCLLARLMVN*RSVYQG
Trigger: CCCTTGGTACACAGACCGCAAGTTCACCATCAGCCT...AGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCACCCTGTCTCTTTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATCTGGCCAGATGTACTaGATGATAACGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRSGQMY*MITMAV
Trigger: CACAGCCATCGTTATCATCAAGTACATCTGGCCAGA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp ACAGAAGTGCAGGATAGGGTAGGAGGTGAGCACGCTCAGGATGATGAAGGCTCGATGACTGAGATCACCTaGCCGATGTCAGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: TEVQDRVGGEHAQDDEGSMTEIT*PMSGMK
Trigger: CTTCATCCCTGACATCGGCAAGGTGATCTCAGTCAT...CGAGCCTTCATCATCCTGAGCGTGCTCACCTCCTACCCTATCCTGCACTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGACTTCAGTGCTACCGTaGGAAGTGGCCAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWTSVLP*EVARLL
Trigger: CAGGAGCCTGGCCACTTCCAACGGTAGCACTGAAGT...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACACCTGGACCATCAGGTTaGATGAAAGAGACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTPGPSG*MKETGW
Trigger: CCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGG...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGAGCAGAGGGAAGAGTTaGGGCTACTTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWSRGKS*GYFCAG
Trigger: GCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGCT...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGAAGGCTGCTGGGAAGTaGAGTAACCCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: LKAWEMSISYGKEADRFMKAAGK*SNPAPR
Trigger: CCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTT...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGAGGCTGATGGTGAACTaGCGGTCTGTGTACCAAGGG +
Preference number: 5 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKRLMVN*RSVYQG
Trigger: CCCTTGGTACACAGACCGCAAGTTCACCATCAGCCT...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AAAGAAGGTGTCGGGGAGGTACACCCTGATTCTGACCAGCCCAGCCCACACAGATACCTGACTATGCATTaGCATGACTTCAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: KEGVGEVHPDSDQPSPHRYLTMH*HDFSAT
Trigger: GGTAGCACTGAAGTCATGCAAATGCATAGTCAGGTA...TCTGTGTGGGCTGGGCTGGTCAGAATCAGGGTGTACCTCCCCGACACCTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS GCA 90 bp TCTTGCAGATTCTCTGCCTTGGTTAAGACCTCTCGGCACCCCCACTaGTCACTGGCAAATTACTCAGCTCATTGTTGCACCTTACCTGCT +
Preference number: 5 (lower is better)
Translates to: SCRFSALVKTSRHPH*SLANYSAHCCTLPA
Trigger: AGCAGGTAAGGTGCAACAATGAGCTGAGTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAATCTGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CCA 90 bp GATTCTCTGCCTTGGTTAAGACCTCTCGGCACCCCCACTGCTCACTaGCAAATTACTCAGCTCATTGTTGCACCTTACCTGCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: DSLPWLRPLGTPTAH*QITQLIVAPYLLFL
Trigger: GAGAAAGAGCAGGTAAGGTGCAACAATGAGCTGAGTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS-3UTR CAA 90 bp TTTCTTATGAGATCTACCGACTCTCTTCACCCGTGGATTCCAGGCATGGAGAAGAGCAGAGGGAAGAGTTaGGGCTACTTCTGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: FLMRSTDSLHPWIPGMEKSRGKS*GYFCAG
Trigger: GCCAGCACAGAAGTAGCCCAAACTCTTCCCTCTGCT...CTTCTCCATGCCTGGAATCCACGGGTGAAGAGAGTCGGTAGATCTCATAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GTGGGGCCTGAGTTTGCCCCAGTCCCTGGAAGAGGATGTCCGGATGTCATCCCATTCTTTCTCAAGACTTaGCCTAAAATTTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: VGPEFAPVPGRGCPDVIPFFLKT*PKICCQ
Trigger: CTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGAA...TGGGATGACATCCGGACATCCTCTTCCAGGGACTGGGGCAAACTCAGGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTAGCACCCAGGCACGCGTaGACGACGATGAAGATGGCC +
Preference number: 5 (lower is better)
Translates to: SDCWKASEASFGSQERILAPRHA*TTMKMA
Trigger: GGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGC...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CAA 90 bp CTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGAGGCTGATGGTGAACTaGCGGTCTGTGTACCAAGGG +
Preference number: 5 (lower is better)
Translates to: LKAWEMSISYGKEADRFMRLMVN*RSVYQG
Trigger: CCCTTGGTACACAGACCGCAAGTTCACCATCAGCCT...CATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp GGATGGTGGCCTTCTGTCCATAGTCATTCTCCAGAGGGAAGTCAGACTGGATTCATGACTGAGATCACCTaGCCGATGTCAGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GWWPSVHSHSPEGSQTGFMTEIT*PMSGMK
Trigger: CTTCATCCCTGACATCGGCAAGGTGATCTCAGTCAT...GAATCCAGTCTGACTTCCCTCTGGAGAATGACTATGGACAGAAGGCCACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219320.9
ENST00000570101.5
CDS-3UTR CAA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGCCTGGACCATCAGGTTaGATGAAAGAGACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWPGPSG*MKETGW
Trigger: CCACCCTGTCTCTTTCATCAAACCTGATGGTCCAGG...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGCTCATGAAATGGAGCTaGGGGGATTCTTTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: PSQTQKQILPTLWGKLTELMKWS*GDSFPS
Trigger: GCTCGGGAAAGAATCCCCCAAGCTCCATTTCATGAG...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000219320.9
CDS-3UTR CAA 90 bp ACTAAGAATGGCCCCATAGCTCTAAGAGATGGGTTCCTGCGACCAATGGCAAAGATGACTGAGATCACCTaGCCGATGTCAGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: TKNGPIALRDGFLRPMAKMTEIT*PMSGMK
Trigger: CTTCATCCCTGACATCGGCAAGGTGATCTCAGTCAT...CTTTGCCATTGGTCGCAGGAACCCATCTCTTAGAGCTATGGGGCCATTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000566598.5
ENST00000570101.5
CDS-3UTR CAA 90 bp AATTTCTCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGACCCGAAGCCTCCCTTTaGAGGCAAAGCGCCCAACTG +
Preference number: 5 (lower is better)
Translates to: NFSDCWKASEASFGSQERPEASL*RQSAQL
Trigger: CAGTTGGGCGCTTTGCCTCAAAAGGGAGGCTTCGGG...TCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CAA 90 bp CCTCCAATGACTGAGATCACCTTGCCGATGTCAGGGATGAAGAGCGCCAGCAGCTTCTTTCTCAAGACTTaGCCTAAAATTTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: PPMTEITLPMSGMKSASSFFLKT*PKICCQ
Trigger: CTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGAA...GCTGCTGGCGCTCTTCATCCCTGACATCGGCAAGGTGATCTCAGTCATTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566598.5
CDS-3UTR CAA 90 bp TCTGATTGTTGGAAGGCTTCTGAAGCCTCATTTGGGTCACAGGAAAGAATACTAAAGGCTGCTGGGAAGTaGAGTAACCCTGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SDCWKASEASFGSQERILKAAGK*SNPAPR
Trigger: CCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTT...TAGTATTCTTTCCTGTGACCCAAATGAGGCTTCAGAAGCCTTCCAACAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS-3UTR CAA 90 bp AGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACAGGTTCATGGTGGTCTGGCCAGATGTACTaGATGATAACGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RPGKCLLAMGKRLTGSWWSGQMY*MITMAV
Trigger: CACAGCCATCGTTATCATCAAGTACATCTGGCCAGA...CCACCATGAACCTGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp CCATCTCAGACACAAAAGCAGATACTCCCAACCTTATGGGGAAAGCTAACGGAGATCACAGCTATAATCTaGTCCTGCTGGTCGCCAATG +
Preference number: 5 (lower is better)
Translates to: PSQTQKQILPTLWGKLTEITAII*SCWSPM
Trigger: CATTGGCGACCAGCAGGACAAGATTATAGCTGTGAT...CTCCGTTAGCTTTCCCCATAAGGTTGGGAGTATCTGCTTTTGTGTCTGAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS-3UTR CAA 90 bp TGGGGCCCCTCAAGGCCTGGGAAATGTCTATTAGCTATGGGAAAGAGGCTGACATTCTTTCTCAAGACTTaGCCTAAAATTTGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: WGPSRPGKCLLAMGKRLTFFLKT*PKICCQ
Trigger: CTGACAGCAAATTTTAGGCAAAGTCTTGAGAAAGAA...TGTCAGCCTCTTTCCCATAGCTAATAGACATTTCCCAGGCCTTGAGGGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219320.9
ENST00000564100.5
ENST00000570101.5
CDS CCA 90 bp TGTGGGTCGTGTGTTAATATCAGTAAGGGTTTAAGACTCAATAAATaGTCACTGCTGCTGTTATTTCTGCAGATGCCCCTTCCCATGTTG +
Preference number: 5 (lower is better)
Translates to: CGSCVNISKGLRLNK*SLLLLFLQMPLPML
Trigger: CAACATGGGAAGGGGCATCTGCAGAAATAACAGCAGCAGTGACCATTTATTGAGTCTTAAACCCTTACTGATATTAACACACGACCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564720.5
CDS CCA 72 bp TGGAGACCCTCTGGCTGGGTAAAGGCGCGGCAGAGCTaGCGCAACAGAGGGACGGGCGTGGGGCGAGGACGC +
Preference number: 6 (lower is better)
Translates to: WRPSGWVKARQS*RNRGTGVGRGR
Trigger: GCGTCCTCGCCCCACGCCCGTCCCTCTGTTGCGCCAGCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 72 bp AGGAGCTCCGGGACCCGATCCCGGCCTAGGACTGGGTaGAGACCCTCTGGCTGGGTAAAGGCGCGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RSSGTRSRPRTG*RPSGWVKARQS
Trigger: GCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCGGGATCGGGTCCCGGAGCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS GCA 72 bp CACTCACTCTTGGGGGCTGTGTCCACACAGGGACTCTaGAGCAGCCGAGCCCGCTCCCCGGCATCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: HSLLGAVSTQGL*SSRARSPASVL
Trigger: GAGCACGGATGCCGGGGAGCGGGCTCGGCTGCTGCAGAGTCCCTGTGTGGACACAGCCCCCAAGAGTGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS CCA 72 bp CGATCCCGGCCTAGGACTGGGTGGAGACCCTCTGGCTaGGTAAAGGCGCGGCAGAGCTGGCGCAACAGAGGG +
Preference number: 6 (lower is better)
Translates to: RSRPRTGWRPSG*VKARQSWRNRG
Trigger: CCCTCTGTTGCGCCAGCTCTGCCGCGCCTTTACCCAGCCAGAGGGTCTCCACCCAGTCCTAGGCCGGGATCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 72 bp CCTGGAGCGAGAAGGGTGGGCTACTGTGGGGTAACCTaGGGAGGAGCTCCGGGACCCGATCCCGGCCTAGGA +
Preference number: 6 (lower is better)
Translates to: PGARRVGYCGVT*GGAPGPDPGLG
Trigger: TCCTAGGCCGGGATCGGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTTCTCGCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 72 bp GATTCCCAGGCCTGGAGCGAGAAGGGTGGGCTACTGTaGGGTAACCTGGGGAGGAGCTCCGGGACCCGATCC +
Preference number: 6 (lower is better)
Translates to: DSQAWSEKGGLL*GNLGRSSGTRS
Trigger: GGATCGGGTCCCGGAGCTCCTCCCCAGGTTACCCCACAGTAGCCCACCCTTCTCGCTCCAGGCCTGGGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 72 bp GCTCAGGCCAGCGATGTAGGCCCCTCAGATCCCAACTaGAGTGTGCTCCCAGTCCAGCCTGGGGTTGGAGCC +
Preference number: 6 (lower is better)
Translates to: AQASDVGPSDPN*SVLPVQPGVGA
Trigger: GGCTCCAACCCCAGGCTGGACTGGGAGCACACTCCAGTTGGGATCTGAGGGGCCTACATCGCTGGCCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS TCA 72 bp ACCCACCAGCTGTCCCCATGTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCACTCCACCCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: THQLSPCRQRGL*PWQLSPLHPRS
Trigger: AGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACAGCTGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564100.5
CDS TCA 72 bp CCACCCCCAGATCAAGAGCAGCCCTGGGCAGGGCTGTaGTCTGGGTCTCCGAGTAGGTTCTGCCGTCAGAAT +
Preference number: 6 (lower is better)
Translates to: PPPDQEQPWAGL*SGSPSRFCRQN
Trigger: ATTCTGACGGCAGAACCTACTCGGAGACCCAGATCACAGCCCTGCCCAGGGCTGCTCTTGATCTGGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564720.5
ENST00000567930.1
CDS GCA 72 bp CCTTTTGAGGCAAAGCGCCCAACTGAACTGCACCTCTaGCCTCCCGGCCAGTGCACTCACCATCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: PFEAKRPTELHL*PPGQCTHHLQC
Trigger: GCACTGCAGATGGTGAGTGCACTGGCCGGGAGGGCAGAGGTGCAGTTCAGTTGGGCGCTTTGCCTCAAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS CAA 90 bp GTCACCACTCCACCCCAGGTCTTCACTTCAGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTGACGTGGCACTGTCCAGGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: VTTPPQVFTSGCCML*KTGTLLTWHCPGEG
Trigger: CCCTTCACCTGGACAGTGCCACGTCAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGACCTGGGGTGGAGTGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566953.5
ENST00000569209.1
CDS TCA 72 bp CCCAGTTTCCAGAGGAAGGTACCTGCTCTTTCTCCCTaGTGGGCTGTGCCAGAGGCGGTTGCTCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: PSFQRKVPALSP*WAVPEAVAPSP
Trigger: GGGAGAAGGAGCAACCGCCTCTGGCACAGCCCATCAGGGAGAAAGAGCAGGTACCTTCCTCTGGAAACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566953.5
CDS TCA 72 bp GAAGACGGGCACACTGCTGACGTGGCACTGTCCAGGTaGAGGGCACCGTCATGGTGGGGAAATGACCTCAAC +
Preference number: 6 (lower is better)
Translates to: EDGHTADVALSR*RAPSWWGNDLN
Trigger: GTTGAGGTCATTTCCCCACCATGACGGTGCCCTTCACCTGGACAGTGCCACGTCAGCAGTGTGCCCGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566953.5
ENST00000569209.1
CDS GCA 72 bp CAGCGATGGCCACCTCACATAGCACACCTGTCAGCTTaGCACACACAGCCCATACCACCTCCTGGTAGGTCC +
Preference number: 6 (lower is better)
Translates to: QRWPPHIAHLSA*HTQPIPPPGRS
Trigger: GGACCTACCAGGAGGTGGTATGGGCTGTGTGTGGCAAGCTGACAGGTGTGCTATGTGAGGTGGCCATCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000564010.5
ENST00000564100.5
ENST00000566598.5
ENST00000570101.5
CDS CCA 72 bp TCCCAACTGGAGTGTGCTCCCAGTCCAGCCTGGGGTTaGAGCCCTGAGATAGAAAGGGTGGGCTGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: SQLECAPSPAWG*SPEIERVGCFV
Trigger: CACAAAGCAGCCCACCCTTTCTATCTCAGGGCTCCAACCCCAGGCTGGACTGGGAGCACACTCCAGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564100.5
ENST00000570101.5
CDS CCA 72 bp TGCGGCTTCCTGACTCTCCAACCAAAATGTTTCCCTTaGGCACCCCTGCCCGAGTCCTGCACCATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: CGFLTLQPKCFP*APLPESCTILQ
Trigger: CTGGAGGATGGTGCAGGACTCGGGCAGGGGTGCCCAAGGGAAACATTTTGGTTGGAGAGTCAGGAAGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CAA 72 bp CCACCCCAGGTCTTCACTTCAGGCTGCTGCATGCTGTaGAAGACGGGCACACTGCTGACGTGGCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: PPQVFTSGCCML*KTGTLLTWHCP
Trigger: TGGACAGTGCCACGTCAGCAGTGTGCCCGTCTTCAACAGCATGCAGCAGCCTGAAGTGAAGACCTGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566953.5
ENST00000569209.1
CDS CAA 72 bp GAAGCTGGGGGTCCCACCTCTTGCAGATTCTCTGCCTaGGTTAAGACCTCTCGGCACCCCCACTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: EAGGPTSCRFSA*VKTSRHPHCSL
Trigger: CAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAATCTGCAAGAGGTGGGACCCCCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CAA 90 bp CTGAAGGCTGCTGGGAAGTTGAGTAACCCTGCACCCAGGCACGCGTaGACGACGATGAAGATGGCCCCAAGTGTGGAAGTGGTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: LKAAGKLSNPAPRHA*TTMKMAPSVEVVPL
Trigger: CAGAGGCACCACTTCCACACTTGGGGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGCAGGGTTACTCAACTTCCCAGCAGCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS TCA 72 bp TTGTCTCTGCTGTCCCCATGTAGACAGCGAGGGCTATaGCCATGGCAGCTGTCACCACTCCACCCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: LSLLSPCRQRGL*PWQLSPLHPRS
Trigger: AGACCTGGGGTGGAGTGGTGACAGCTGCCATGGTCATAGCCCTCGCTGTCTACATGGGGACAGCAGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565785.5
CDS GCA 72 bp AGCTGGCAGAGCCAGAATAGAAGCCTGATGCCCACATaGTCAGGCCAGCGATGTAGGCCCCTCAGATCCCAA +
Preference number: 6 (lower is better)
Translates to: SWQSQNRSLMPT*SGQRCRPLRSQ
Trigger: TTGGGATCTGAGGGGCCTACATCGCTGGCCTGAGCATGTGGGCATCAGGCTTCTATTCTGGCTCTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564100.5
ENST00000567930.1
ENST00000570101.5
CDS CCA 72 bp TGTGAGGGAGGGGAGAGCAGTGCGTGTATCACTTACTaGCCATCCCTGACCCGAAGCCTCCCTTTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: CEGGESSACITY*PSLTRSLPFEA
Trigger: TGCCTCAAAAGGGAGGCTTCGGGTCAGGGATGGCCAGTAAGTGATACACGCACTGCTCTCCCCTCCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564391.1
CDS CAA 72 bp GCTGGGAAGTTGAGTAACCCTGCACCCAGGCACGCGTaGACGACGATGAAGATGGCCCCAAGTGTGGAAGTG +
Preference number: 6 (lower is better)
Translates to: AGKLSNPAPRHA*TTMKMAPSVEV
Trigger: CACTTCCACACTTGGGGCCATCTTCATCGTCGTCAACGCGTGCCTGGGTGCAGGGTTACTCAACTTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS GCA 72 bp TCCTGCAAGGTCTGTGGGTTCTGCCTTACAACCACATaGCTCAGGGAGCTGAGCAACACCCACCTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: SCKVCGFCLTTT*LRELSNTHLFG
Trigger: CCCAAACAGGTGGGTGTTGCTCAGCTCCCTGAGGCATGTGGTTGTAAGGCAGAACCCACAGACCTTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000562397.5
ENST00000563196.5
ENST00000564100.5
ENST00000564391.1
ENST00000566598.5
ENST00000570101.5
CDS GCA 72 bp GATGAAAACCAGCATACCCATCTGCAGTGCGATGCCTaGTCTTTCTCCCTGATGGGCTGTGCCAGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: DENQHTHLQCDA*SFSLMGCARGG
Trigger: ACCGCCTCTGGCACAGCCCATCAGGGAGAAAGAGCAGGCATCGCACTGCAGATGGGTATGCTGGTTTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564010.5
CDS GCA 72 bp GCCGGGAAGGAGAGACTAAGTGTCCTCATCCCCAGCTaGCTCTTATCTGATTCCACCCCTAGGGACATCCAC +
Preference number: 6 (lower is better)
Translates to: AGKERLSVLIPS*LLSDSTPRDIH
Trigger: GTGGATGTCCCTAGGGGTGGAATCAGATAAGAGGCAGCTGGGGATGAGGACACTTAGTCTCTCCTTCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569209.1
CDS CCA 72 bp TGTGCCAGAGGCGGTTGCTCCTTCTCCCCAAAGGTCTaGGATCTGATTCTCCTCACTTCCCTTTCTGGACCC +
Preference number: 6 (lower is better)
Translates to: CARGGCSFSPKV*DLILLTSLSGP
Trigger: GGGTCCAGAAAGGGAAGTGAGGAGAATCAGATCCCAGACCTTTGGGGAGAAGGAGCAACCGCCTCTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000563196.5
ENST00000564010.5
ENST00000564100.5
ENST00000564391.1
ENST00000564964.1
ENST00000566598.5
ENST00000566953.5
ENST00000567930.1
ENST00000570101.5
ENST00000570214.5
CDS CAA 90 bp TGGAACTCAGAAGCTGGGGGTCCCACCTCTTGCAGATTCTCTGCCTaGGTTAAGACCTCTCGGCACCCCCACTGCTCACTGGCAAATTAC +
Preference number: 6 (lower is better)
Translates to: WNSEAGGPTSCRFSA*VKTSRHPHCSLANY
Trigger: GTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAATCTGCAAGAGGTGGGACCCCCAGCTTCTGAGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CAA 72 bp GGCTGGTTTGACCTCTTCCATCTCAGAGAGTTTGGCTaGAATGAGGCACAGCCCGCCCACAGAAGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: GWFDLFHLREFG*NEAQPAHRSAG
Trigger: TCCTGCACTTCTGTGGGCGGGCTGTGCCTCATTCAAGCCAAACTCTCTGAGATGGAAGAGGTCAAACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566953.5
CDS GCA 72 bp CACTTCGCCCCTTTAGGCCTTTACATCATATGTTCCTaGTCTTTCTCCCTGATGGGCTGTGCCAGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: HFAPLGLYIICS*SFSLMGCARGG
Trigger: ACCGCCTCTGGCACAGCCCATCAGGGAGAAAGAGCAGGAACATATGATGTAAAGGCCTAAAGGGGCGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567930.1
CDS CCA 72 bp AGCCATCCAGGAAGCCGGCCTGGTCAGGATGTTCCCTaGGGTCATCTCTTTATCTGGCCAGATGTACTTGAT +
Preference number: 6 (lower is better)
Translates to: SHPGSRPGQDVP*GHLFIWPDVLD
Trigger: ATCAAGTACATCTGGCCAGATAAAGAGATGACCCCAGGGAACATCCTGACCAGGCCGGCTTCCTGGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000564010.5
ENST00000564100.5
ENST00000565785.5
ENST00000566598.5
ENST00000569209.1
ENST00000570101.5
ENST00000570214.5
CDS TCA 72 bp CATCCACCTTCAGCTCTAGCGACCACAAGTGTCCACTaGATGAACCGGAGACTATGCCAAGCAGACTCAGGA +
Preference number: 6 (lower is better)
Translates to: HPPSALATTSVH*MNRRLCQADSG
Trigger: TCCTGAGTCTGCTTGGCATAGTCTCCGGTTCATTCAGTGGACACTTGTGGTCGCTAGAGCTGAAGGTGGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569209.1
CDS GCA 72 bp ACTGGCAAATTACTCAGCTCATTGTTGCACCTTACCTaGTCTTTCTCCCTGATGGGCTGTGCCAGAGGCGGT +
Preference number: 6 (lower is better)
Translates to: TGKLLSSLLHLT*SFSLMGCARGG
Trigger: ACCGCCTCTGGCACAGCCCATCAGGGAGAAAGAGCAGGTAAGGTGCAACAATGAGCTGAGTAATTTGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS GCA 72 bp TTCTCTGCCTTGGTTAAGACCTCTCGGCACCCCCACTaGTCACTGGCAAATTACTCAGCTCATTGTTGCACC +
Preference number: 6 (lower is better)
Translates to: FSALVKTSRHPH*SLANYSAHCCT
Trigger: GGTGCAACAATGAGCTGAGTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGGCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CCA 72 bp CCTTGGTTAAGACCTCTCGGCACCCCCACTGCTCACTaGCAAATTACTCAGCTCATTGTTGCACCTTACCTG +
Preference number: 6 (lower is better)
Translates to: PWLRPLGTPTAH*QITQLIVAPYL
Trigger: CAGGTAAGGTGCAACAATGAGCTGAGTAATTTGCCAGTGAGCAGTGGGGGTGCCGAGAGGTCTTAACCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS CAA 90 bp GTCAGGATGTTCCCTGGGGTCATCTCTTTATCTGGCCAGATGTACTaGATGATAACGATGGCTGTGACGTACCAGGTACCCACGACGCTC +
Preference number: 6 (lower is better)
Translates to: VRMFPGVISLSGQMY*MITMAVTYQVPTTL
Trigger: GAGCGTCGTGGGTACCTGGTACGTCACAGCCATCGTTATCATCAAGTACATCTGGCCAGATAAAGAGATGACCCCAGGGAACATCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000564010.5
ENST00000564100.5
ENST00000565785.5
ENST00000566598.5
ENST00000569209.1
ENST00000570101.5
ENST00000570214.5
CDS CAA 90 bp ACAGAGACAGAGGTCTACAGAGTGATTCGTCCAAGGTCACAAGGCTaGGTGCGGCTTCCTGACTCTCCAACCAAAATGTTTCCCTTGGGC +
Preference number: 6 (lower is better)
Translates to: TETEVYRVIRPRSQG*VRLPDSPTKMFPLG
Trigger: GCCCAAGGGAAACATTTTGGTTGGAGAGTCAGGAAGCCGCACCAAGCCTTGTGACCTTGGACGAATCACTCTGTAGACCTCTGTCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS TCA 72 bp AGCTGGAGGAAACTGAGCGGCTCTCACGCTTACTCATaGAATGGAGCTTCAGGACAGATAGGAAAACAGGCC +
Preference number: 6 (lower is better)
Translates to: SWRKLSGSHAYS*NGASGQIGKQA
Trigger: GGCCTGTTTTCCTATCTGTCCTGAAGCTCCATTTCATGAGTAAGCGTGAGAGCCGCTCAGTTTCCTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564100.5
ENST00000567930.1
ENST00000570101.5
CDS CCA 72 bp GAGGAAACTGAGCGGCTCTCACGCTTACTCATGAAATaGAGCTTCAGGACAGATAGGAAAACAGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: EETERLSRLLMK*SFRTDRKTGPG
Trigger: TCCTGGGCCTGTTTTCCTATCTGTCCTGAAGCTCCATTTCATGAGTAAGCGTGAGAGCCGCTCAGTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564100.5
ENST00000567930.1
ENST00000570101.5
CDS CCA 72 bp CCTGGTCAGGATGTTCCCTGGGGTCATCTCTTTATCTaGCCAGATGTACTTGATGATAACGATGGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: PGQDVPWGHLFI*PDVLDDNDGCD
Trigger: GTCACAGCCATCGTTATCATCAAGTACATCTGGCCAGATAAAGAGATGACCCCAGGGAACATCCTGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000564010.5
ENST00000564100.5
ENST00000565785.5
ENST00000566598.5
ENST00000569209.1
ENST00000570101.5
ENST00000570214.5
CDS CAA 72 bp TTCCCTGGGGTCATCTCTTTATCTGGCCAGATGTACTaGATGATAACGATGGCTGTGACGTACCAGGTACCC +
Preference number: 6 (lower is better)
Translates to: FPGVISLSGQMY*MITMAVTYQVP
Trigger: GGGTACCTGGTACGTCACAGCCATCGTTATCATCAAGTACATCTGGCCAGATAAAGAGATGACCCCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000219320.9
ENST00000562149.5
ENST00000564010.5
ENST00000564100.5
ENST00000565785.5
ENST00000566598.5
ENST00000569209.1
ENST00000570101.5
ENST00000570214.5
CDS CAA 72 bp GAGGTCTACAGAGTGATTCGTCCAAGGTCACAAGGCTaGGTGCGGCTTCCTGACTCTCCAACCAAAATGTTT +
Preference number: 6 (lower is better)
Translates to: EVYRVIRPRSQG*VRLPDSPTKMF
Trigger: AAACATTTTGGTTGGAGAGTCAGGAAGCCGCACCAAGCCTTGTGACCTTGGACGAATCACTCTGTAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564964.1
CDS TCA 72 bp AGGATCTTCAGTGTTCTCAAGGTTCAGCTCATAGCCTaGGACCCGCAGAGAAATGATGGTCCTAAAGCATCA +
Preference number: 6 (lower is better)
Translates to: RIFSVLKVQLIA*DPQRNDGPKAS
Trigger: TGATGCTTTAGGACCATCATTTCTCTGCGGGTCTCAGGCTATGAGCTGAACCTTGAGAACACTGAAGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564720.5
CDS CCA 72 bp TGTGTTAATATCAGTAAGGGTTTAAGACTCAATAAATaGTCACTGCTGCTGTTATTTCTGCAGATGCCCCTT +
Preference number: 6 (lower is better)
Translates to: CVNISKGLRLNK*SLLLLFLQMPL
Trigger: AAGGGGCATCTGCAGAAATAACAGCAGCAGTGACCATTTATTGAGTCTTAAACCCTTACTGATATTAACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564720.5