RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC38A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000139974

Ensembl transcript IDs: ENST00000267488.9, ENST00000354886.6, ENST00000451406.5, ENST00000491344.7, ENST00000524402.6, ENST00000525585.1, ENST00000525723.6, ENST00000526539.2, ENST00000527591.5, ENST00000528350.5, ENST00000529212.1, ENST00000529345.6, ENST00000532148.5, ENST00000534758.1, ENST00000554072.1, ENST00000554304.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTTGGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTaGGGCCTCTTCCCTTGGCTTGTAAACAGTTGCCTTCTTGCTGTG +
Preference number: 1 (lower is better)
Translates to: RLGSARSRCGHVWFS*GLFPWLVNSCLLAV
Trigger: CACAGCAAGAAGGCAACTGTTTACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR GCA 90 bp CCTAGGGCCGCTCATCCCATCATGTTCGCAGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGCTTTTCATCTTTTCTTTCTAGAGTA +
Preference number: 1 (lower is better)
Translates to: PRAAHPIMFAASTQR*ISSTRRFSSFLSRV
Trigger: TACTCTAGAAAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCGAACATGATGGGATGAGCGGCCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR GCA 90 bp TTCATGTTGAGGAGGCTGAGAAGAAGGCAGGGGAGGGGTTGGTCTTaGCTGGGAGATGAAATAATCTGTATAACAAATTCCCGTGACACG +
Preference number: 1 (lower is better)
Translates to: FMLRRLRRRQGRGWS*LGDEIICITNSRDT
Trigger: CGTGTCACGGGAATTTGTTATACAGATTATTTCATCTCCCAGGCAAGACCAACCCCTCCCCTGCCTTCTTCTCAGCCTCCTCAACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491344.7
3UTR CCA 90 bp TATTTGCTCACAGTTCTGGAGGTTGGGAAGTGCAAGATCAAGGTGTaGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTAAA +
Preference number: 1 (lower is better)
Translates to: YLLTVLEVGKCKIKV*TRLVLLRPLPLACK
Trigger: TTTACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR TCA 90 bp GCCCAAGTAGGCTGTCTGAATACACATACTAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAA +
Preference number: 1 (lower is better)
Translates to: AQVGCLNTHTKQKMD*VRSQESNCQQQEAK
Trigger: TTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTTAGTATGTGTATTCAGACAGCCTACTTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
3UTR GCA 90 bp TCTCAATCTCAGACCTGTCTTAGCCTATCTCACACCCCCAAGGAATaGAAGGATTATATCTGGTGCTTCATATGGTTCACAGAACAGCGC +
Preference number: 1 (lower is better)
Translates to: SQSQTCLSLSHTPKE*KDYIWCFIWFTEQR
Trigger: GCGCTGTTCTGTGAACCATATGAAGCACCAGATATAATCCTTGCATTCCTTGGGGGTGTGAGATAGGCTAAGACAGGTCTGAGATTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR CCA 90 bp ATTGTCTTCATGTTGAGGAGGCTGAGAAGAAGGCAGGGGAGGGGTTaGTCTTGCCTGGGAGATGAAATAATCTGTATAACAAATTCCCGT +
Preference number: 1 (lower is better)
Translates to: IVFMLRRLRRRQGRG*SCLGDEIICITNSR
Trigger: ACGGGAATTTGTTATACAGATTATTTCATCTCCCAGGCAAGACCAACCCCTCCCCTGCCTTCTTCTCAGCCTCCTCAACATGAAGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491344.7
3UTR GCA 90 bp CAAAGATTGAAGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTAGTTAGTTCATGGGCCCAAGTAGGC +
Preference number: 1 (lower is better)
Translates to: QRLKEFNQRKTGESM*RQNHEVVSSWAQVG
Trigger: GCCTACTTGGGCCCATGAACTAACTACTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCTTCAATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
3UTR CCA 90 bp TGGGTGATTAAACAACATCATTTATTTGCTCACAGTTCTGGAGGTTaGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: WVIKQHHLFAHSSGG*EVQDQGVDTFGSPE
Trigger: CTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAATAAATGATGTTGTTTAATCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525723.6
3UTR CCA 90 bp TCTCACACCCCCAAGGAATGCAAGGATTATATCTGGTGCTTCATATaGTTCACAGAACAGCGCTTTCATATGGGTAATCAAACATTGGCT +
Preference number: 1 (lower is better)
Translates to: SHTPKECKDYIWCFI*FTEQRFHMGNQTLA
Trigger: AGCCAATGTTTGATTACCCATATGAAAGCGCTGTTCTGTGAACCATATGAAGCACCAGATATAATCCTTGCATTCCTTGGGGGTGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR CCA 90 bp AGTATATGGGCAATATTGAGGTATGGCAGAGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCACTCTCTTTGGAGAAATGAAAGAGCT +
Preference number: 1 (lower is better)
Translates to: SIWAILRYGREMKKP*LVRHKHSLWRNERA
Trigger: AGCTCTTTCATTTCTCCAAAGAGAGTGCTTATGCCTTACCAACCATGGCTTTTTCATTTCTCTGCCATACCTCAATATTGCCCATATACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR TCA 90 bp CTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATaGTTATTAGTAGTGTTTGTCCATCAAGATACCAATATCTCCTCC +
Preference number: 1 (lower is better)
Translates to: LFWEEVQEGTQCQHI*LLVVFVHQDTNISS
Trigger: GGAGGAGATATTGGTATCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR TCA 90 bp CTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATaGTTATTAGTAGTGTTTGTCCATCAAGATACCAATATCTACTAT +
Preference number: 1 (lower is better)
Translates to: LFWEEVQEGTQCQHI*LLVVFVHQDTNIYY
Trigger: ATAGTAGATATTGGTATCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR TCA 90 bp CGCAGCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: RSFHSTLHLFHPTLFIFSCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...AGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTCTGAATCTCGGCGGCTaGCTTCAGACCCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSLNLGG*LQTPSP
Trigger: GGGGGATGGGGTCTGAAGGCAGCCGCCGAGATTCAG...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGC +
Preference number: 2 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACASTQR*ISSTRR
Trigger: GCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACKQKMD*VRSQES
Trigger: GCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTT...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCATCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTASTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR GCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
3UTR-3UTR TCA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 2 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANKQKMD*VRSQES
Trigger: GCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTT...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR TCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTGTGAAGTTCAGCAGTaGGTACATAATCCTAGGGCC +
Preference number: 2 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKCEVQQ*VHNPRA
Trigger: GGCCCTAGGATTATGTACTCACTGCTGAACTTCACA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR GCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTATGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR TCA 90 bp AAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTAGTTAGTTCATGGGCCTTGTCTTTAATTCTGTaGCAGGTCACTTCACCTCTC +
Preference number: 2 (lower is better)
Translates to: KTGESMCRQNHEVVSSWALSLIL*QVTSPL
Trigger: GAGAGGTGAAGTGACCTGTCACAGAATTAAAGACAA...GGCCCATGAACTAACTACTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527591.5
3UTR-3UTR TCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 2 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSTGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
3UTR-3UTR GCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 2 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR GCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTATCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTCATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR TCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTTCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: KPILGRSARGNTMPTHMISTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCATATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGGAAGTAGTTAGTTCATaGGCCCAAGTAGGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKEVVSS*AQVGCL
Trigger: CAGACAGCCTACTTGGGCCCATGAACTAACTACTTC...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp CCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 2 (lower is better)
Translates to: PISPPSSNSESQLWNVRATGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...AGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR-3UTR CCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 2 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
3UTR-3UTR CCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCACATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 2 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp ACTCCCCTCCTTTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATATCTGGTGCTTCATATaGTTCACAGAACAGCGCTTT +
Preference number: 2 (lower is better)
Translates to: TPLLCLRPVLSVYSTFSHIWCFI*FTEQRF
Trigger: AAAGCGCTGTTCTGTGAACCATATGAAGCACCAGAT...ATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAGGAGGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR TCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGTCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
3UTR-3UTR TCA 90 bp CAGAATGAGACCCTGGGAGATGAAATAATCTGTATAACAAATTCCCGTGACACGCTTTGTCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 2 (lower is better)
Translates to: QNETLGDEIICITNSRDTLCHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGACAAAG...CGTGTCACGGGAATTTGTTATACAGATTATTTCATCTCCCAGGGTCTCATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525723.6
3UTR-3UTR TCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGGATGTTACAGCTGTCTaGATACACATACTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMDVTAV*IHILSR
Trigger: TCTGCTTAGTATGTGTATTCAGACAGCTGTAACATC...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529345.6
3UTR-3UTR GCA 90 bp CAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 2 (lower is better)
Translates to: QYLLPAVTQNHSYGMLELSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...CAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR-3UTR GCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGTCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: RKPILGRSARGNTMPTHMSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 2 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000527591.5
ENST00000529345.6
3UTR CAA 90 bp TATGATTTGCTGAGAAATGACAGCAATATCATTCACTCCCCTCCTTaGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATCC +
Preference number: 2 (lower is better)
Translates to: YDLLRNDSNIIHSPP*FKTRTVSIFNLLPS
Trigger: GGATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAGGAGGGGAGTGAATGATATTGCTGTCATTTCTCAGCAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR GCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 2 (lower is better)
Translates to: KPILGRSARGNTMPTHMISELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGTATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 2 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp CCCCAGAAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAATCTCAGACCTGTAACAGCGCTTTCATATaGGTAATCAAACATTGGCTG +
Preference number: 2 (lower is better)
Translates to: PQKFTLYSSLRASQSQTCNSAFI*VIKHWL
Trigger: CAGCCAATGTTTGATTACCCATATGAAAGCGCTGTT...ACAGGTCTGAGATTGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTTCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR GCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGAACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 2 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRTGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR GCA 90 bp AAGATACCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 2 (lower is better)
Translates to: KIPISPPSSNSESQLWNVSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...AACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGGTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR-3UTR CCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTTATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 2 (lower is better)
Translates to: KPILGRSARGNTMPTHMIYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp AGTGCAAGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCACAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SARGNTMPTHMIISSVCPQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...TGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 2 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
3UTR-3UTR GCA 90 bp CATATGATTATTAGTAGTGTTTGTCCATCAAGATACCAATATCTCCTCCCAGCATCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: HMIISSVCPSRYQYLLPASSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...TGCTGGGAGGAGATATTGGTATCTTGATGGACAAACACTACTAATAATCATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR-3UTR CCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGCAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR CCA 90 bp AGTGCAAGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCAGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 2 (lower is better)
Translates to: SARGNTMPTHMIISSVCPGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...TGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR GCA 90 bp GTGTCTTGCATATCCCCAGAAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAAAGGATTATATCTGGTaGTTCATATGGTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: VSCISPEIYPLFLLKSISKDYIW*FIWFTE
Trigger: TTCTGTGAACCATATGAAGCACCAGATATAATCCTT...TGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTTCTGGGGATATGCAAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR CCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGAGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 2 (lower is better)
Translates to: RGNTMPTHMIISSVCPSREVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CCA 90 bp TCTTGCATATCCCCAGAAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAATCTGCAAGGATTATATCTaGTGCTTCATATGGTTCACA +
Preference number: 2 (lower is better)
Translates to: SCISPEIYPLFLLKSISICKDYI*CFIWFT
Trigger: TGTGAACCATATGAAGCACCAGATATAATCCTTGCA...GATTGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTTCTGGGGATATGCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR GCA 90 bp TGCATATCCCCAGAAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAATCTCATTACTGCTTCACTTCTaGCTAATTTGTAACTGTCTT +
Preference number: 2 (lower is better)
Translates to: CISPEIYPLFLLKSISISLLLHF*LICNCL
Trigger: AAGACAGTTACAAATTAGGCAGAAGTGAAGCAGTAA...TGAGATTGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTTCTGGGGATATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR-3UTR CCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGTCAGAATCACAGTTATaGAATGTTAGAGCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRSESQL*NVRAGR
Trigger: TCTTCCAGCTCTAACATTCCATAACTGTGATTCTGA...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
3UTR-3UTR CCA 90 bp AAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAATCTCAGACCTGTCTTAGCTGGGTAATCAAACATTaGCTGAGTAGTTTCTATTCT +
Preference number: 2 (lower is better)
Translates to: KFTLYSSLRASQSQTCLSWVIKH*LSSFYS
Trigger: AGAATAGAAACTACTCAGCCAATGTTTGATTACCCA...GCTAAGACAGGTCTGAGATTGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR TCA 72 bp GGCTGCTATCACGTTCATAACTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTCAGACCCCATCCCCCA +
Preference number: 3 (lower is better)
Translates to: GCYHVHNCANLI*ISAAAFRPHPP
Trigger: TGGGGGATGGGGTCTGAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR GCA 72 bp AGGCCTCTTCCCTTGGCTTGTAAACAGTTGCCTTCTTaGTGTGTCCTTGCGTGGCCTTTCCTCTGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: RPLPLACKQLPS*CVLAWPFLWVH
Trigger: GTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCAAGAAGGCAACTGTTTACAAGCCAAGGGAAGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR CAA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCCCAAGAAAGCCTATTTaGGGAAGAAGTGCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPPRKPI*GRSARG
Trigger: CCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGG...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR CCA 72 bp TTGCCTTCTTGCTGTGTCCTTGCGTGGCCTTTCCTCTaGGTGCACATCTCCATGGTATCTCTTCCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: LPSCCVLAWPFL*VHISMVSLPFL
Trigger: CAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCAAGAAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
3UTR-3UTR CAA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCATGAAAAAGCCATGGTaGGTAAGGCATAAGCACTCT +
Preference number: 3 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPMKKPW*VRHKHS
Trigger: AGAGTGCTTATGCCTTACCAACCATGGCTTTTTCAT...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR GCA 72 bp GCTCATCCCATCATGTTCGCAGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGCTTTTCATCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: AHPIMFAASTQR*ISSTRRFSSFL
Trigger: AAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCGAACATGATGGGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR CCA 72 bp TCCTTGCGTGGCCTTTCCTCTGGGTGCACATCTCCATaGTATCTCTTCCTTTTCTGTAGTCTCAGCTACTCT +
Preference number: 3 (lower is better)
Translates to: SLRGLSSGCTSP*YLFLFCSLSYS
Trigger: AGAGTAGCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
3UTR-3UTR CAA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 3 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPSIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR-3UTR CAA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAATTGGAAGCCTTAAGTaGAGGCTAGCCCTTATAAGA +
Preference number: 3 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVIGSLK*RLALIR
Trigger: TCTTATAAGGGCTAGCCTCAACTTAAGGCTTCCAAT...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526539.2
3UTR-3UTR CAA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGCCAAGAAAGCCTATTTaGGGAAGAAGTGCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMPRKPI*GRSARG
Trigger: CCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGG...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR GCA 72 bp AAGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTAGTTAGTTCATGGGCC +
Preference number: 3 (lower is better)
Translates to: KEFNQRKTGESM*RQNHEVVSSWA
Trigger: GGCCCATGAACTAACTACTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
3UTR-3UTR CAA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAATACCCACTGCCATTTaGTTCTGCTTTTCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVIPTAI*FCFSVN
Trigger: ATTAACAGAAAAGCAGAACAAAATGGCAGTGGGTAT...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
3UTR-3UTR CAA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGCCAAGAAAGCCTATTTaGGGAAGAAGTGCAAGAGGG +
Preference number: 3 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKPRKPI*GRSARG
Trigger: CCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGG...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CAA 90 bp TCATTCACTCCCCTCCTTTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCCAACCTGTGTCTaGCATATCCCCAGAAATTTA +
Preference number: 3 (lower is better)
Translates to: SFTPLLCLRPVLSVYSTFSPTCV*HIPRNL
Trigger: TAAATTTCTGGGGATATGCAAGACACAGGTTGGGGA...GAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAGGAGGGGAGTGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR CCA 72 bp AAACAACATCATTTATTTGCTCACAGTTCTGGAGGTTaGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGT +
Preference number: 3 (lower is better)
Translates to: KQHHLFAHSSGG*EVQDQGVDTFG
Trigger: ACCAAACGTGTCCACACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAATAAATGATGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
3UTR TCA 72 bp GAGCTGAGATCACACCACTGCACGCCAACTATTAAGTaGAACTGGATCATCATAAAGGTCTTCATTCTCATT +
Preference number: 3 (lower is better)
Translates to: ELRSHHCTPTIK*NWIIIKVFILI
Trigger: AATGAGAATGAAGACCTTTATGATGATCCAGTTTCACTTAATAGTTGGCGTGCAGTGGTGTGATCTCAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491344.7
3UTR CCA 72 bp ATGATAAACTACTTGTGTAGCCAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGAACACAATGCCAACAC +
Preference number: 3 (lower is better)
Translates to: MINYLCSQESLF*EEVQEGTQCQH
Trigger: GTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGGCTACACAAGTAGTTTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR CCA 72 bp CCCAAGGAATGCAAGGATTATATCTGGTGCTTCATATaGTTCACAGAACAGCGCTTTCATATGGGTAATCAA +
Preference number: 3 (lower is better)
Translates to: PKECKDYIWCFI*FTEQRFHMGNQ
Trigger: TTGATTACCCATATGAAAGCGCTGTTCTGTGAACCATATGAAGCACCAGATATAATCCTTGCATTCCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534758.1
3UTR GCA 72 bp ACTTGTGTAGCCAAGAAAGCCTATTTTGGGAAGAAGTaGAAGAGGGAACACAATGCCAACACATATGATTAT +
Preference number: 3 (lower is better)
Translates to: TCVAKKAYFGKK*KREHNANTYDY
Trigger: ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGGCTACACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
3UTR-3UTR CAA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAAATACCCACTGCCATTTaGTTCTGCTTTTCTGTTAAT +
Preference number: 3 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQIPTAI*FCFSVN
Trigger: ATTAACAGAAAAGCAGAACAAAATGGCAGTGGGTAT...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp GCTGCTATCACGTTCATAACTGCGCCAATCTCATCTGAATCTCGGCGGCTGCCTGGTGGGAGGATTGCTTaGGTCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AAITFITAPISSESRRLPGGRIA*VREAEV
Trigger: AACCTCTGCCTCCCGGACTCAAGCAATCCTCCCACC...AGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp GCTGCTATCACGTTCATAACTGCGCCAATCTCATCTGAATCTCGGCGGCTGCCTTATTTGGCAGGCACTTaGGGGAAGCCGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AAITFITAPISSESRRLPYLAGT*GKPEGV
Trigger: GACGCCCTCCGGCTTCCCTCAAGTGCCTGCCAAATA...AGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR TCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGGTGGGAGGATTGCTTaGGTCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVGGRIA*VREAEV
Trigger: AACCTCTGCCTCCCGGACTCAAGCAATCCTCCCACC...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR GCA 90 bp CGCAGCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTAGGACGCCTCCATGCTaGTCTCCAGCTGACTACCAG +
Preference number: 4 (lower is better)
Translates to: RSFHSTLHLFHPTLFIFSRTPPC*SPADYQ
Trigger: CTGGTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCT...AGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR GCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCCTGAATCTCGGCGGCTaGCTTCAGACCCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSLNLGG*LQTPSP
Trigger: GGGGGATGGGGTCTGAAGGCAGCCGCCGAGATTCAG...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGAGCCCCGCTCAGCGTTaGAGCTCCCCCAGGACGCCT +
Preference number: 4 (lower is better)
Translates to: RKPILGRSARGNTMPTHMSPAQR*SSPRTP
Trigger: AGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCT...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAGGTGGGAGGATTGCTTaGGTCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLGGRIA*VREAEV
Trigger: AACCTCTGCCTCCCGGACTCAAGCAATCCTCCCACC...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCGGTGGGAGGATTGCTTaGGTCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSGGRIA*VREAEV
Trigger: AACCTCTGCCTCCCGGACTCAAGCAATCCTCCCACC...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR GCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCCCCAGGACGCCTCCATaGTGCTCTCCAGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSPRTPP*CSPADY
Trigger: GTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCTGGG...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR GCA 90 bp CGCAGCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTCCGGGAGGCAGAGGTTaGAATGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RSFHSTLHLFHPTLFIFSPGGRG*NELRSH
Trigger: GTGTGATCTCAGCTCATTGCAACCTCTGCCTCCCGG...AGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTCCGGGAGGCAGAGGTTaGAATGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACPGGRG*NELRSH
Trigger: GTGTGATCTCAGCTCATTGCAACCTCTGCCTCCCGG...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCCTGCACGCCAACCTGTaGGACAGAATGAGACCCCCA +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSLHANL*DRMRPP
Trigger: TGGGGGTCTCATTCTGTCGCACAGGTTGGCGTGCAG...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529345.6
CDS-3UTR GCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTCTCCCCTGTCCCGGTaGGGTCCTCCTTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKSPLSR*GPPFLG
Trigger: ACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR GCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGC +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSASTQR*ISSTRR
Trigger: GCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCCACAGTTCTGGAGGTTaGGAAGTGCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPHSSGG*EVQDQG
Trigger: ACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTG...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAGCCCCGCTCAGCGTTaGAGCTCCCCCAGGACGCCT +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGSPAQR*SSPRTP
Trigger: AGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGGCCTTTCCTCTGGGTaGACATCTCCATGGTATCTC +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVGLSSG*TSPWYL
Trigger: GAGATACCATGGAGATGTGCACCCAGAGGAAAGGCC...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR TCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACAGCCCCGCTCAGCGTTaGAGCTCCCCCAGGACGCCT +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDSPAQR*SSPRTP
Trigger: AGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCT...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATCACGTTTGGTTCTCCTaGGGCCTCTTCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANHVWFS*GLFPWL
Trigger: AAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTG...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGCCGGGAGGCAGAGGTTaGAATGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKPGGRG*NELRSH
Trigger: GTGTGATCTCAGCTCATTGCAACCTCTGCCTCCCGG...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAGCTTCTTCAGGCTGCTaGACAGAGACATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSASSGC*TETYQP
Trigger: GGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGC...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGTGCTGTGTCCTTGCGTaGCCTTTCCTCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMCCVLA*PFLWVH
Trigger: GTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCA...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR CCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTGAAGTAGTTAGTTCATaGGCCCAAGTAGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACEVVSS*AQVGCL
Trigger: CAGACAGCCTACTTGGGCCCATGAACTAACTACTTC...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR TCA 90 bp ATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGGATGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISPPSSNSESQLWNVRAGCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...TCCAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR TCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RKPILGRSARGNTMPTHMCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR GCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATGGCCTTTCCTCTGGGTaGACATCTCCATGGTATCTC +
Preference number: 4 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANGLSSG*TSPWYL
Trigger: GAGATACCATGGAGATGTGCACCCAGAGGAAAGGCC...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR GCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAAACAGTTGCCTTCTTaGTGTGTCCTTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAKQLPS*CVLAWP
Trigger: AGGCCACGCAAGGACACAGCAAGAAGGCAACTGTTT...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR GCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAAAACAGTTGCCTTCTTaGTGTGTCCTTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLKQLPS*CVLAWP
Trigger: AGGCCACGCAAGGACACAGCAAGAAGGCAACTGTTT...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTTCTCCCCTGTCCCGGTaGGGTCCTCCTTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: KPILGRSARGNTMPTHMISPLSR*GPPFLG
Trigger: ACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGA...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR GCA 90 bp ATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGGAGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGC +
Preference number: 4 (lower is better)
Translates to: ISPPSSNSESQLWNVRAGASTQR*ISSTRR
Trigger: GCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC...TCCAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR GCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGGCTTCCACTCAACGCTaGATCTCTTCCACCCGACGC +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKASTQR*ISSTRR
Trigger: GCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPEVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CCA 90 bp AAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTTTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: KIKVWTRLVLLRPLPLACFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...ACAAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGTGCTGTGTCCTTGCGTaGCCTTTCCTCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKCCVLA*PFLWVH
Trigger: GTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCA...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CCA 90 bp CGCAGCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTGGGTGCACATCTCCATaGTATCTCTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RSFHSTLHLFHPTLFIFSGCTSP*YLFLFC
Trigger: ACAGAAAAGGAAGAGATACCATGGAGATGTGCACCC...AGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp GCTGCTATCACGTTCATAACTGCGCCAATCTCATCTGAATCTCGGCGGCTGCCTATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AAITFITAPISSESRRLPIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...AGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCATGTGAAGTTCAGCAGTaGGTACATAATCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTACEVQQ*VHNPRA
Trigger: GGCCCTAGGATTATGTACTCACTGCTGAACTTCACA...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR GCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGCCCAGGACGCCTCCATaGTGCTCTCCAGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGPRTPP*CSPADY
Trigger: GTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCTGGG...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267488.9
ENST00000525723.6
CDS-3UTR GCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGCTGAATCTCGGCGGCTaGCTTCAGACCCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRLNLGG*LQTPSP
Trigger: GGGGGATGGGGTCTGAAGGCAGCCGCCGAGATTCAG...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTATTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR TCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGCTGCTCTCCAGCTaGCTACCAGTTCCATCTACG +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKMLLSS*LPVPST
Trigger: CGTAGATGGAACTGGTAGTCAGCTGGAGAGCAGCAT...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR GCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAGGACGCCTCCATGCTaGTCTCCAGCTGACTACCAG +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGRTPPC*SPADYQ
Trigger: CTGGTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267488.9
ENST00000525723.6
CDS-3UTR GCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
ENST00000529345.6
CDS-3UTR GCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTATCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp AGCCTTAAGTTGAGGCTAGCCCTTATAAGATCTCAGGTTCAACCAGCAATTTCTGGCCTTTCCTCTGGGTaGACATCTCCATGGTATCTC +
Preference number: 4 (lower is better)
Translates to: SLKLRLALIRSQVQPAISGLSSG*TSPWYL
Trigger: GAGATACCATGGAGATGTGCACCCAGAGGAAAGGCC...AGAAATTGCTGGTTGAACCTGAGATCTTATAAGGGCTAGCCTCAACTTAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR GCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACTCTCCCCTGTCCCGGTaGGGTCCTCCTTTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDSPLSR*GPPFLG
Trigger: ACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGA...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp GCTGCTATCACGTTCATAACTGCGCCAATCTCATCTGAATCTCGGCGGCTGCCTCATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AAITFITAPISSESRRLPHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...AGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTATTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGTGCTGTGTCCTTGCGTaGCCTTTCCTCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGCCVLA*PFLWVH
Trigger: GTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCA...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGCACAGTTCTGGAGGTTaGGAAGTGCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKHSSGG*EVQDQG
Trigger: ACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTG...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAATTTGCTCACAGTTCTaGAGGTTGGGAAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLICSQF*RLGSAR
Trigger: TCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAAT...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCGTCACTTCACCTCTCTaGGCTTTAGTTGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSVTSPL*ALVVHL
Trigger: CAGATGAACAACTAAAGCCCAGAGAGGTGAAGTGAC...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR TCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCCTTTGTCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSLCHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGACAAAG...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR TCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGTCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RKPILGRSARGNTMPTHMSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR TCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGTGCGCCAATCTCATCTaGATCTCGGCGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRCANLI*ISAAAF
Trigger: GAAGGCAGCCGCCGAGATTCAGATGAGATTGGCGCA...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCATTGTCTTTAATTCTGTaGCAGGTCACTTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTALSLIL*QVTSPL
Trigger: GAGAGGTGAAGTGACCTGTCACAGAATTAAAGACAA...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526539.2
ENST00000527591.5
CDS-3UTR GCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCTCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGGGGAGGGGTTGGTCTTaGCTGGGAGATGAAATAATC +
Preference number: 4 (lower is better)
Translates to: RKPILGRSARGNTMPTHMGRGWS*LGDEII
Trigger: GATTATTTCATCTCCCAGGCAAGACCAACCCCTCCC...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491344.7
CDS-3UTR GCA 90 bp TTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATCCCCAACCTGTCACACCCCCAAGGAATaGAAGGATTATATCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LFKTRTVSIFNLLPSPTCHTPKE*KDYIWC
Trigger: GCACCAGATATAATCCTTGCATTCCTTGGGGGTGTG...ACAGGTTGGGGATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR GCA 90 bp CCCAAGGAATGCAAGGATTATATCTGGTGCTTCATATGGTTCACAGAACAGCGCCCCCAACCTGTGTCTTaGATATCCCCAGAAATTTAC +
Preference number: 4 (lower is better)
Translates to: PKECKDYIWCFIWFTEQRPQPVS*ISPEIY
Trigger: GTAAATTTCTGGGGATATGCAAGACACAGGTTGGGG...GCGCTGTTCTGTGAACCATATGAAGCACCAGATATAATCCTTGCATTCCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAGCTTCTTCAGGCTGCTaGACAGAGACATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVASSGC*TETYQP
Trigger: GGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGC...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCACAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGATTTGCTCACAGTTCTaGAGGTTGGGAAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKICSQF*RLGSAR
Trigger: TCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAAT...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGGGGTGCACATCTCCATaGTATCTCTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKGCTSP*YLFLFC
Trigger: ACAGAAAAGGAAGAGATACCATGGAGATGTGCACCC...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATGGGTGCACATCTCCATaGTATCTCTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANGCTSP*YLFLFC
Trigger: ACAGAAAAGGAAGAGATACCATGGAGATGTGCACCC...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR CCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAGTCACTTCACCTCTCTaGGCTTTAGTTGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLVTSPL*ALVVHH
Trigger: ATGATGAACAACTAAAGCCCAGAGAGGTGAAGTGAC...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527591.5
CDS-3UTR TCA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCGATGTTACAGCTGTCTaGATACACATACTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSDVTAV*IHILSR
Trigger: TCTGCTTAGTATGTGTATTCAGACAGCTGTAACATC...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529345.6
CDS-3UTR TCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
ENST00000529345.6
CDS-3UTR TCA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCATTCTTTGAAGGACTTTaGAGTTCACAGTATATGGGC +
Preference number: 4 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTAFFEGL*SSQYMG
Trigger: GCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAA...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGCTTTGTCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKLCHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGACAAAG...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp TGCGTGGCCTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CVAFPLGAHLHGISSFSVKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...TACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR TCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGACACGTTTGGTTCTCCTaGGGCCTCTTCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRHVWFS*GLFPWL
Trigger: AAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTG...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGTCCGCTTCTTCAGGCTaGTGGACAGAGACATACCAG +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGSASSG*WTETYQ
Trigger: CTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGCGGA...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp AGGAATTCAATCAACGGAAGACAGGTGAGTCAATGTGCAGGCAGAACCATGAAGTCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RNSINGRQVSQCAGRTMKSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...CTTCATGGTTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGATTGAATTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGCCGGGAGGCAGAGGTTaGAATGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKPGGRG*NELRSH
Trigger: GTGTGATCTCAGCTCATTGCAACCTCTGCCTCCCGG...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR GCA 90 bp GTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTCCACAGAGGCCTTTCCTCTGGGTaGACATCTCCATGGTATCTC +
Preference number: 4 (lower is better)
Translates to: VIQMQRVQDLHKMLQLHRGLSSG*TSPWYL
Trigger: GAGATACCATGGAGATGTGCACCCAGAGGAAAGGCC...TCTGTGGAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMTGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGGCTTCTTCAGGCTGCTaGACAGAGACATACCAGCCC +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKASSGC*TETYQP
Trigger: GGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGC...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAATGCTGTGTCCTTGCGTaGCCTTTCCTCTGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQCCVLA*PFLWVH
Trigger: GTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCA...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGGACACAGTTCTGGAGGTTaGGAAGTGCAAGATCAAGGT +
Preference number: 4 (lower is better)
Translates to: ISPPSSNSESQLWNVRAGHSSGG*EVQDQG
Trigger: ACCTTGATCTTGCACTTCCCAACCTCCAGAACTGTG...TCCAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVKQKMD*VRSQES
Trigger: GCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp AAGATACCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KIPISPPSSNSESQLWNVKQKMD*VRSQES
Trigger: GCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTT...AACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGGTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR TCA 90 bp GCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTTTCTAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ASTQRCISSTRRFSSFLSKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...AGAAAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAACACGTTTGGTTCTCCTaGGGCCTCTTCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQHVWFS*GLFPWL
Trigger: AAGCCAAGGGAAGAGGCCTCAGGAGAACCAAACGTG...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTGTCTTGCCTGGGAGATaGAATAATCTGTATAACAAA +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSVLPGR*NNLYNK
Trigger: TTTGTTATACAGATTATTTCATCTCCCAGGCAAGAC...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491344.7
CDS-3UTR TCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGGTTATCCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMVIHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGGATAAC...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR GCA 90 bp ATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGGAAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ISPPSSNSESQLWNVRAGNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...TCCAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR GCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAAACAGTTGCCTTCTTaGTGTGTCCTTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGKQLPS*CVLAWP
Trigger: AGGCCACGCAAGGACACAGCAAGAAGGCAACTGTTT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAACAACATCATTTATTTaGTCACAGTTCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLTTSFI*SQFWRL
Trigger: CAACCTCCAGAACTGTGAGCAAATAAATGATGTTGT...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATACAGCCCACTTACGTTaGTTAGCAACGGACTCAACT +
Preference number: 4 (lower is better)
Translates to: AYFGKKCKREHNANTYDYTAHLR*LATDST
Trigger: AGTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGT...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR GCA 90 bp CTTTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATCCCCAACCTTCTGAATTATTATGGTaGCTGCCACCACCAACTGTA +
Preference number: 4 (lower is better)
Translates to: LCLRPVLSVYSTFSHPQPSELLW*LPPPTV
Trigger: TACAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...AGGTTGGGGATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR CCA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTCATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGTTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp GCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTTTCTAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: ASTQRCISSTRRFSSFLSNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...AGAAAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATTTGCTCACAGTTCTaGAGGTTGGGAAGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKICSQF*RLGSAR
Trigger: TCTTGCACTTCCCAACCTCCAGAACTGTGAGCAAAT...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGGCGGTCCTCCTTTTCTaGGTCTTATTTGGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRAVLLF*VLFGRH
Trigger: GTGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGC...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR TCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp CCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCAAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: PATTNFPGNPNAKSPRSSKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...TGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGATCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR TCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGTCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKSTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR TCA 90 bp AGCCTTAAGTTGAGGCTAGCCCTTATAAGATCTCAGGTTCAACCAGCAATTTCTTTGTCTTTAATTCTGTaGCAGGTCACTTCACCTCTC +
Preference number: 4 (lower is better)
Translates to: SLKLRLALIRSQVQPAISLSLIL*QVTSPL
Trigger: GAGAGGTGAAGTGACCTGTCACAGAATTAAAGACAA...AGAAATTGCTGGTTGAACCTGAGATCTTATAAGGGCTAGCCTCAACTTAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR GCA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: AYFGKKCKREHNANTYDYNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR GCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAACAGTTGCCTTCTTaGTGTGTCCTTGCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRKQLPS*CVLAWP
Trigger: AGGCCACGCAAGGACACAGCAAGAAGGCAACTGTTT...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: KPILGRSARGNTMPTHMITGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp CCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTCAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PISPPSSNSESQLWNVRAQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...AGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGCAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATCATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMEMKKP*LVRHKH
Trigger: GTGCTTATGCCTTACCAACCATGGCTTTTTCATTTC...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AGTGCAAGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCAGAAGTAGTTAGTTCATaGGCCCAAGTAGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SARGNTMPTHMIISSVCPEVVSS*AQVGCL
Trigger: CAGACAGCCTACTTGGGCCCATGAACTAACTACTTC...TGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp CCTGTCTTAGCCTATCTCACACCCCCAAGGAATGCAAGGATTATATCTGGTGCTTGGGTAATCAAACATTaGCTGAGTAGTTTCTATTCT +
Preference number: 4 (lower is better)
Translates to: PVLAYLTPPRNARIISGAWVIKH*LSSFYS
Trigger: AGAATAGAAACTACTCAGCCAATGTTTGATTACCCA...AGCACCAGATATAATCCTTGCATTCCTTGGGGGTGTGAGATAGGCTAAGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR TCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGTTCTTTGAAGGACTTTaGAGTTCACAGTATATGGGC +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKFFEGL*SSQYMG
Trigger: GCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAA...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp TTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATAGTATGAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: FLAGKWIRGTVKSTANSMKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...CATACTATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp TGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAATCAACGGAAGACAGGTaGGTCAATGTGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CYSSTENFTKIEGIQSTESTEDR*VNVQAE
Trigger: TTCTGCCTGCACATTGACTCACCTGTCTTCCGTTGA...TTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR TCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGTGTGAAGTTCAGCAGTaGGTACATAATCCTAGGGCC +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKCEVQQ*VHNPRA
Trigger: GGCCCTAGGATTATGTACTCACTGCTGAACTTCACA...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000527591.5
CDS-3UTR GCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAGTCTGTGAAGTTCGTTaGTTAGCAACGGACTCAACT +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVVCEVR*LATDST
Trigger: AGTTGAGTCCGTTGCTAAGCAACGAACTTCACAGAC...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267488.9
ENST00000491344.7
CDS-3UTR GCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTCTGTGAAGTTCGTTaGTTAGCAACGGACTCAACT +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGVCEVR*LATDST
Trigger: AGTTGAGTCCGTTGCTAAGCAACGAACTTCACAGAC...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267488.9
ENST00000491344.7
CDS-3UTR GCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: AYFGKKCKREHNANTYDYSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR GCA 90 bp ATTCTATTACTGCTTCACTTCTGCCTAATTTGTAACTGTCTTGAGGGCAAGGACTCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ILLLLHFCLICNCLEGKDSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...GTCCTTGCCCTCAAGACAGTTACAAATTAGGCAGAAGTGAAGCAGTAATAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR GCA 90 bp CCCAAGGAATGCAAGGATTATATCTGGTGCTTCATATGGTTCACAGAACAGCGCTTACTGCTTCACTTCTaGCTAATTTGTAACTGTCTT +
Preference number: 4 (lower is better)
Translates to: PKECKDYIWCFIWFTEQRLLLHF*LICNCL
Trigger: AAGACAGTTACAAATTAGGCAGAAGTGAAGCAGTAA...GCGCTGTTCTGTGAACCATATGAAGCACCAGATATAATCCTTGCATTCCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR CCA 90 bp CAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTGTATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 4 (lower is better)
Translates to: QYLLPAVTQNHSYGMLELYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...CAGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR CCA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RKPILGRSARGNTMPTHMGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKEVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGGAAGTAGTTAGTTCATaGGCCCAAGTAGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKEVVSS*AQVGCL
Trigger: CAGACAGCCTACTTGGGCCCATGAACTAACTACTTC...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAGGGTGCACATCTCCATaGTATCTCTTCCTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVGCTSP*YLFLFC
Trigger: ACAGAAAAGGAAGAGATACCATGGAGATGTGCACCC...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KPILGRSARGNTMPTHMIIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR TCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTACTTTGTCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVLCHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGACAAAG...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp GTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTCCACAGACTTTGTCATAAAAAGTaGGGTACCCAAAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VIQMQRVQDLHKMLQLHRLCHKK*GTQRVQ
Trigger: CTGCACTCTTTGGGTACCTCACTTTTTATGACAAAG...TCTGTGGAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAATTATTATGGTGCCTaGCACCACCAACTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRNYYGA*HHQLSR
Trigger: CCTGGAAAGTTGGTGGTGGCAGGCACCATAATAATT...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR GCA 90 bp GTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTCCACAGATCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: VIQMQRVQDLHKMLQLHRSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...TCTGTGGAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGACAACATCATTTATTTaGTCACAGTTCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKTTSFI*SQFWRL
Trigger: CAACCTCCAGAACTGTGAGCAAATAAATGATGTTGT...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR GCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACACAGGTGAGTCAATGTaGAGGCAGAACCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDTGESM*RQNHEV
Trigger: TACTTCATGGTTCTGCCTGCACATTGACTCACCTGT...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp CTTTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATCCCCAACCTAAGGATTATATCTGGTaGTTCATATGGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: LCLRPVLSVYSTFSHPQPKDYIW*FIWFTE
Trigger: TTCTGTGAACCATATGAAGCACCAGATATAATCCTT...AGGTTGGGGATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTACAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KPILGRSARGNTMPTHMIGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: AYFGKKCKREHNANTYDYEVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACTTTCTGGCAGGGAAGTaGATTAGAGGGACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDFLAGK*IRGTVK
Trigger: TTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAA...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGTTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AGCCTTAAGTTGAGGCTAGCCCTTATAAGATCTCAGGTTCAACCAGCAATTTCTAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: SLKLRLALIRSQVQPAISNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...AGAAATTGCTGGTTGAACCTGAGATCTTATAAGGGCTAGCCTCAACTTAAGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR CCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAAGAAGTAGTTAGTTCATaGGCCCAAGTAGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQEVVSS*AQVGCL
Trigger: CAGACAGCCTACTTGGGCCCATGAACTAACTACTTC...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR CCA 90 bp CCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAGAGCTTCAGAATCACAGTTATaGAATGTTAGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PISPPSSNSESQLWNVRASESQL*NVRAGR
Trigger: TCTTCCAGCTCTAACATTCCATAACTGTGATTCTGA...AGCTCTAACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR CCA 90 bp GTGTCTTGCATATCCCCAGAAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAAACAGCGCTTTCATATaGGTAATCAAACATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VSCISPEIYPLFLLKSISNSAFI*VIKHWL
Trigger: CAGCCAATGTTTGATTACCCATATGAAAGCGCTGTT...TGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTTCTGGGGATATGCAAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR TCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAGATGTTACAGCTGTCTaGATACACATACTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVDVTAV*IHILSR
Trigger: TCTGCTTAGTATGTGTATTCAGACAGCTGTAACATC...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267488.9
CDS-3UTR TCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp AAATTTACCCTTTATTCCTCCTTAAGAGCATCTCAATCTCAGACCTGTCTTAGCATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KFTLYSSLRASQSQTCLSIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...GCTAAGACAGGTCTGAGATTGAGATGCTCTTAAGGAGGAATAAAGGGTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR TCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATTCTTTGAAGGACTTTaGAGTTCACAGTATATGGGC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVFFEGL*SSQYMG
Trigger: GCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp TTTAATTCTGTGACAGGTCACTTCACCTCTCTGGGCTTTAGTTGTTCATCTGTAAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: FNSVTGHFTSLGFSCSSVKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...TACAGATGAACAACTAAAGCCCAGAGAGGTGAAGTGACCTGTCACAGAATTAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000526539.2
CDS-3UTR GCA 90 bp CATATGATTATTAGTAGTGTTTGTCCATCAAGATACCAATATCTCCTCCCAGCATCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: HMIISSVCPSRYQYLLPASELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...TGCTGGGAGGAGATATTGGTATCTTGATGGACAAACACTACTAATAATCATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR GCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACTCTGAATTATTATGGTaGCTGCCACCACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDSELLW*LPPPTF
Trigger: GAAAGTTGGTGGTGGCAGGCACCATAATAATTCAGA...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR GCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGTCCAGTCAAAAATTCTaGAATAGCAGCAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRSSQKF*NSSRKL
Trigger: GAGCTTCCTGCTGCTATTGCAGAATTTTTGACTGGA...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGTATTCTGAATTATTATaGTGCCTGCCACCACCAACT +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGYSELL*CLPPPT
Trigger: AGTTGGTGGTGGCAGGCACCATAATAATTCAGAATA...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGCAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGEMKKP*LVRHKH
Trigger: GTGCTTATGCCTTACCAACCATGGCTTTTTCATTTC...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGGCAATATTGAGGTATaGCAGAGAAATGAAAAAGCC +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGGNIEV*QRNEKA
Trigger: GGCTTTTTCATTTCTCTGCCATACCTCAATATTGCC...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVEVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGATTGTTACAGCTTTTCTaGCAGGGAAGTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRLLQLF*QGSGLE
Trigger: CTCTAATCCACTTCCCTGCCAGAAAAGCTGTAACAA...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: KPILGRSARGNTMPTHMINMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGAGGGGAAACTGTATGTTaGGGTAAAACGGTATATGTG +
Preference number: 4 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRGETVC*GKTVYV
Trigger: CACATATACCGTTTTACCCCAACATACAGTTTCCCC...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TGGGTAATCAAACATTGGCTGAGTAGTTTCTATTCTATTACTGCTTCACTTCTGATCTGGTGCTTCATATaGTTCACAGAACAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: WVIKHWLSSFYSITASLLIWCFI*FTEQRF
Trigger: AAAGCGCTGTTCTGTGAACCATATGAAGCACCAGAT...CAGAAGTGAAGCAGTAATAGAATAGAAACTACTCAGCCAATGTTTGATTACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR TCA 90 bp GATGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DVTAPQRILQRLKEFNQRIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...CCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR TCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACTTCTTTGAAGGACTTTaGAGTTCACAGTATATGGGC +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDFFEGL*SSQYMG
Trigger: GCCCATATACTGTGAACTTCAAAGTCCTTCAAAGAA...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR TCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp AAGATACCAATATCTCCTCCCAGCAGTAACTCAGAATCACAGTTATGGAATGTTAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KIPISPPSSNSESQLWNVKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...AACATTCCATAACTGTGATTCTGAGTTACTGCTGGGAGGAGATATTGGTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp AGTGCAAGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCAAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: SARGNTMPTHMIISSVCPKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...TGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR GCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAACAACATCATTTATTTaGTCACAGTTCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVTTSFI*SQFWRL
Trigger: CAACCTCCAGAACTGTGAGCAAATAAATGATGTTGT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAACAAGAAAGCCTATTTTaGGAAGAAGTGCAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: CYSSTENFTKIEGIQSTEQESLF*EEVQEG
Trigger: TCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTG...TTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTACATAAGCACTCTCTTTaGAGAAATGAAAGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVHKHSL*RNERAL
Trigger: CAAAGCTCTTTCATTTCTCCAAAGAGAGTGCTTATG...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATCAGAATCACAGTTATaGAATGTTAGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVSESQL*NVRAGR
Trigger: TCTTCCAGCTCTAACATTCCATAACTGTGATTCTGA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp GTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTCCACAGATCAGAATCACAGTTATaGAATGTTAGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VIQMQRVQDLHKMLQLHRSESQL*NVRAGR
Trigger: TCTTCCAGCTCTAACATTCCATAACTGTGATTCTGA...TCTGTGGAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
CDS-3UTR CCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAAGGGGAAACTGTATGTTaGGGTAAAACGGTATATGTG +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQGETVC*GKTVYV
Trigger: CACATATACCGTTTTACCCCAACATACAGTTTCCCC...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR TCA 90 bp TGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAATAGCTCCAATATTCTaGATTATTATGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: CYSSTENFTKIEGIQSTEIAPIF*IIMVPA
Trigger: GGCAGGCACCATAATAATTCAGAATATTGGAGCTAT...TTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
ENST00000528350.5
CDS-3UTR TCA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACAAAAATCAAACATGTTaGTGTACTGGCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDKNQTC*CTGTNY
Trigger: GTAGTTGGTGCCAGTACATCAACATGTTTGATTTTT...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAAGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQEMKKP*LVRHKH
Trigger: GTGCTTATGCCTTACCAACCATGGCTTTTTCATTTC...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp TGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: CYSSTENFTKIEGIQSTEEMKKP*LVRHKH
Trigger: GTGCTTATGCCTTACCAACCATGGCTTTTTCATTTC...TTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CCA 90 bp AGATCATCTGGCTCAACAACTTCATTTTATATGTCTACTATAGTCTCCAGTCAAGAAGTTCACAGTATATaGGCAATATTGAGGTATGGC +
Preference number: 4 (lower is better)
Translates to: RSSGSTTSFYMSTIVSSQEVHSI*AILRYG
Trigger: GCCATACCTCAATATTGCCCATATACTGTGAACTTC...TTGACTGGAGACTATAGTAGACATATAAAATGAAGTTGTTGAGCCAGATGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CCA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGAAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CCA 90 bp ATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTGTCTGAATACAACATGTTGATGTACTaGCACCAACTACACCAAATA +
Preference number: 4 (lower is better)
Translates to: IQMQRVQDLHKMLQLSEYNMLMY*HQLHQI
Trigger: TATTTGGTGTAGTTGGTGCCAGTACATCAACATGTT...GTATTCAGACAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529345.6
CDS-3UTR CCA 90 bp GCAAGGACTACATTTATTTTACCTGCCACTACAAGTATTGCCATTTACAGCTTATGCAAGGATTATATCTaGTGCTTCATATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: ARTTFILPATTSIAIYSLCKDYI*CFIWFT
Trigger: TGTGAACCATATGAAGCACCAGATATAATCCTTGCA...TAAGCTGTAAATGGCAATACTTGTAGTGGCAGGTAAAATAAATGTAGTCCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS-3UTR TCA 90 bp TGTTACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAAAAATGGCGAATCCATaGGAATGGAAAATTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CYSSTENFTKIEGIQSTEKMANP*EWKIGE
Trigger: TTCTCCAATTTTCCATTCTCATGGATTCGCCATTTT...TTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTAACA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
CDS TCA 90 bp CCCTGCCCTGCGCTCCAGTCGTCGGTCGCGCCAGAGGCGGAGCTTTaGGCCCGGCCCTTCCGGCATTCCGTACTTCACCAGGGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PCPALQSSVAPEAEL*ARPFRHSVLHQGLE
Trigger: TTCCAGGCCCTGGTGAAGTACGGAATGCCGGAAGGGCCGGGCTCAAAGCTCCGCCTCTGGCGCGACCGACGACTGGAGCGCAGGGCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS GCA 90 bp CTCCAGCTGACTACCAGTTCCATCTACGAGCCTCTACCCCTGCCCTaGGCTCCAGTCGTCGGTCGCGCCAGAGGCGGAGCTTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: LQLTTSSIYEPLPLP*APVVGRARGGALSP
Trigger: CGGGCTCAAAGCTCCGCCTCTGGCGCGACCGACGACTGGAGCGCAGGGCAGGGGTAGAGGCTCGTAGATGGAACTGGTAGTCAGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS TCA 90 bp TCAGCGTTGAAGCTCCCCCAGGACGCCTCCATGCTGCTCTCCAGCTaGCTACCAGTTCCATCTACGAGCCTCTACCCCTGCCCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: SALKLPQDASMLLSS*LPVPSTSLYPCPAL
Trigger: GAGCGCAGGGCAGGGGTAGAGGCTCGTAGATGGAACTGGTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCTGGGGGAGCTTCAACGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS GCA 90 bp GCCGGAGGGCGTCAGCGCGGGGAAGCGAACACAGCCCACTTACGTTaGTTAGCAACGGACTCAACTCTTCGGCCTCCGCTTCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: AGGRQRGEANTAHLR*LATDSTLRPPLLQA
Trigger: AGCCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGTGTTCGCTTCCCCGCGCTGACGCCCTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS TCA 90 bp CTTCTTCAGGCTGCTGGACAGAGACATACCAGCCCCGCTCAGCGTTaGAGCTCCCCCAGGACGCCTCCATGCTGCTCTCCAGCTGACTAC +
Preference number: 5 (lower is better)
Translates to: LLQAAGQRHTSPAQR*SSPRTPPCCSPADY
Trigger: GTAGTCAGCTGGAGAGCAGCATGGAGGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267488.9
ENST00000354886.6
ENST00000525723.6
ENST00000532148.5
ENST00000554304.5
CDS CCA 90 bp TTCAGGCTCCAGCATCTCCCCTGTCCCGGTGCGGTCCTCCTTTTCTaGGTCTTATTTGGCAGGCACTTGAGGGAAGCCGGAGGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: FRLQHLPCPGAVLLF*VLFGRHLREAGGRQ
Trigger: CTGACGCCCTCCGGCTTCCCTCAAGTGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGATGCTGGAGCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CCA 90 bp CTTAGCAACGGACTCAACTCTTCGGCCTCCGCTTCTTCAGGCTGCTaGACAGAGACATACCAGCCCCGCTCAGCGTTGAAGCTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LSNGLNSSASASSGC*TETYQPRSALKLPQ
Trigger: CTGGGGGAGCTTCAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267488.9
ENST00000354886.6
ENST00000491344.7
ENST00000525723.6
ENST00000532148.5
ENST00000554304.5
CDS GCA 90 bp TTGCTTAGCAACGGACTCAACTCTTCGGCCTCCGCTTCTTCAGGCTaGTGGACAGAGACATACCAGCCCCGCTCAGCGTTGAAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLSNGLNSSASASSG*WTETYQPRSALKLP
Trigger: GGGGAGCTTCAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267488.9
ENST00000354886.6
ENST00000491344.7
ENST00000525723.6
ENST00000532148.5
ENST00000554304.5
CDS-3UTR CAA 90 bp GTGCCTGCCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTCAGCCCCGCTCAGCGTaGAAGCTCCCCCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: VPATTNFPGNPNAKSPRSQPRSA*KLPQDA
Trigger: GGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTG...AGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGGCAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp ATGTTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGCAGCCCCGCTCAGCGTaGAAGCTCCCCCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: MLFFIQGVFRNNSFLQLGQPRSA*KLPQDA
Trigger: GGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTG...CCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp GTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGTTACAGCTCCACAGACAGCCCCGCTCAGCGTaGAAGCTCCCCCAGGACGCC +
Preference number: 5 (lower is better)
Translates to: VIQMQRVQDLHKMLQLHRQPRSA*KLPQDA
Trigger: GGCGTCCTGGGGGAGCTTCAACGCTGAGCGGGGCTG...TCTGTGGAGCTGTAACATCTTATGAAGATCTTGGACTCTTTGCATTTGGATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp GCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTTTCTTTATTTGGCAGGCACTaGAGGGAAGCCGGAGGGCGT +
Preference number: 5 (lower is better)
Translates to: ASTQRCISSTRRFSSFLSLFGRH*REAGGR
Trigger: ACGCCCTCCGGCTTCCCTCAAGTGCCTGCCAAATAA...AGAAAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS-3UTR CAA 90 bp GGGAAGTGCAAGATCAAGGTGTGGACACGTTTGGTTCTCCTGAGGCCTCTTCCCTTGGCTTGTAAACAGTaGCCTTCTTGCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GKCKIKVWTRLVLLRPLPLACKQ*PSCCVL
Trigger: AAGGACACAGCAAGAAGGCAACTGTTTACAAGCCAA...GGGAAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTTGATCTTGCACTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCAAGGTGTGGACACGTTaGGTTCTCCTGAGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSKVWTR*VLLRPL
Trigger: AAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTT...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATCTGAGGCCTCTTCCCTaGGCTTGTAAACAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANLRPLP*ACKQLP
Trigger: AGGCAACTGTTTACAAGCCAAGGGAAGAGGCCTCAG...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp CTTTCCTCTGGGTGCACATCTCCATGGTATCTCTTCCTTTTCTGTAGTCTCAGCTCACAGTTCTGGAGGTaGGGAAGTGCAAGATCAAGG +
Preference number: 5 (lower is better)
Translates to: LSSGCTSPWYLFLFCSLSSQFWR*GSARSR
Trigger: CCTTGATCTTGCACTTCCCAACCTCCAGAACTGTGA...GCTGAGACTACAGAAAAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp GCTGCTATCACGTTCATAACTGCGCCAATCTCATCTGAATCTCGGCGGCTGCCTAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: AAITFITAPISSESRRLPSIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...AGGCAGCCGCCGAGATTCAGATGAGATTGGCGCAGTTATGAACGTGATAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATTCACAGTTCTGGAGGTaGGGAAGTGCAAGATCAAGG +
Preference number: 5 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANSQFWR*GSARSR
Trigger: CCTTGATCTTGCACTTCCCAACCTCCAGAACTGTGA...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp GCTTCCACTCAACGCTGCATCTCTTCCACCCGACGCTTTTCATCTTTTCTTTCTTTGGCTTGTAAACAGTaGCCTTCTTGCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: ASTQRCISSTRRFSSFLSLACKQ*PSCCVL
Trigger: AAGGACACAGCAAGAAGGCAACTGTTTACAAGCCAA...AGAAAGAAAAGATGAAAAGCGTCGGGTGGAAGAGATGCAGCGTTGAGTGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGAAGGTGTGGACACGTTaGGTTCTCCTGAGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: RKPILGRSARGNTMPTHMKVWTR*VLLRPL
Trigger: AAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTT...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp GCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAATCCAAAGACACCGGTATTAATGAAAAAGCCATGGTaGGTAAGGCATAAGCACTCT +
Preference number: 5 (lower is better)
Translates to: ARRATVSSKKLNPKTPVLMKKPW*VRHKHS
Trigger: AGAGTGCTTATGCCTTACCAACCATGGCTTTTTCAT...TAATACCGGTGTCTTTGGATTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp ACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAATTTGGCTTGTAAACAGTaGCCTTCTTGCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TAFLAGKWIRGTVKSTANLACKQ*PSCCVL
Trigger: AAGGACACAGCAAGAAGGCAACTGTTTACAAGCCAA...ATTTGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000526539.2
ENST00000529345.6
CDS-3UTR CAA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATCTGAGGCCTCTTCCCTaGGCTTGTAAACAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: AYFGKKCKREHNANTYDYLRPLP*ACKQLP
Trigger: AGGCAACTGTTTACAAGCCAAGGGAAGAGGCCTCAG...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp ACTCCCCTCCTTTGTTTAAGACCCGTACTGTCAGTATATTCAACCTTCTCCCATATTCACTCCCCTCCTTaGTTTAAGACCCGTACTGTC +
Preference number: 5 (lower is better)
Translates to: TPLLCLRPVLSVYSTFSHIHSPP*FKTRTV
Trigger: GACAGTACGGGTCTTAAACAAAGGAGGGGAGTGAAT...ATGGGAGAAGGTTGAATATACTGACAGTACGGGTCTTAAACAAAGGAGGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS TCA 90 bp TTGGCTTCAACCTGTCTGAATACACATACTAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: LASTCLNTHTKQKMD*VRSQESNCQQQEAK
Trigger: TTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTTAGTATGTGTATTCAGACAGGTTGAAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532148.5
CDS-3UTR CAA 90 bp GTTACAGCTTTTCTGGCAGGGAAGTGGATTAGAGGGACTGTCAAAAGCACAGCAAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: VTAFLAGKWIRGTVKSTASIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...TGCTGTGCTTTTGACAGTCCCTCTAATCCACTTCCCTGCCAGAAAAGCTGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTACTGAGGCCTCTTCCCTaGGCTTGTAAACAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVLRPLP*ACKQLP
Trigger: AGGCAACTGTTTACAAGCCAAGGGAAGAGGCCTCAG...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGCTCATTGTCTTCATGTaGAGGAGGCTGAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKLIVFM*RRLRRR
Trigger: CCTTCTTCTCAGCCTCCTCAACATGAAGACAATGAG...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491344.7
CDS-3UTR CAA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGAAGGTGTGGACACGTTaGGTTCTCCTGAGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKKVWTR*VLLRPL
Trigger: AAGAGGCCTCAGGAGAACCAAACGTGTCCACACCTT...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS-3UTR CAA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGCACAGCCCACTTACGTaGCTTAGCAACGGACTCAAC +
Preference number: 5 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKHSPLT*LSNGLN
Trigger: GTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGTG...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS TCA 90 bp CTTCCAAAAATCTGTCTGAATACACATACTAAGCAGAAGATGGACTaGGTAAGAAGCCAGGAGAGCAACTGTCAGCAGCAAGAAGCTAAA +
Preference number: 5 (lower is better)
Translates to: LPKICLNTHTKQKMD*VRSQESNCQQQEAK
Trigger: TTTAGCTTCTTGCTGCTGACAGTTGCTCTCCTGGCTTCTTACTCAGTCCATCTTCTGCTTAGTATGTGTATTCAGACAGATTTTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554304.5
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTACCAAGAAAGCCTATTTaGGGAAGAAGTGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVPRKPI*GRSARG
Trigger: CCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGG...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp CCACCACCAACTTTCCAGGTAATCCAAATGCAAAGAGTCCAAGATCTTCATAAGATGAAAAAGCCATGGTaGGTAAGGCATAAGCACTCT +
Preference number: 5 (lower is better)
Translates to: PPPTFQVIQMQRVQDLHKMKKPW*VRHKHS
Trigger: AGAGTGCTTATGCCTTACCAACCATGGCTTTTTCAT...CTTATGAAGATCTTGGACTCTTTGCATTTGGATTACCTGGAAAGTTGGTGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp ATTCTATTACTGCTTCACTTCTGCCTAATTTGTAACTGTCTTGAGGGCAAGGACTCCCCAACCTGTGTCTaGCATATCCCCAGAAATTTA +
Preference number: 5 (lower is better)
Translates to: ILLLLHFCLICNCLEGKDSPTCV*HIPRNL
Trigger: TAAATTTCTGGGGATATGCAAGACACAGGTTGGGGA...GTCCTTGCCCTCAAGACAGTTACAAATTAGGCAGAAGTGAAGCAGTAATAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534758.1
CDS TCA 90 bp AAGGCTAGAGAGAATAAGGTTCTTTACATTCCACCTCAGCTCCCATaGAAAGTCCTGATAGACCCCAAACGCTCCATAAAATCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: KARENKVLYIPPQLP*KVLIDPKRSIKSKV
Trigger: TACTTTAGATTTTATGGAGCGTTTGGGGTCTATCAGGACTTTTCATGGGAGCTGAGGTGGAATGTAAAGAACCTTATTCTCTCTAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525585.1
CDS-3UTR CAA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACCCAAGAAAGCCTATTTaGGGAAGAAGTGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDPRKPI*GRSARG
Trigger: CCCTCTTGCACTTCTTCCCAAAATAGGCTTTCTTGG...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000524402.6
ENST00000525723.6
ENST00000527591.5
CDS-3UTR CAA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATATGAAAAAGCCATGGTaGGTAAGGCATAAGCACTCT +
Preference number: 5 (lower is better)
Translates to: AYFGKKCKREHNANTYDYMKKPW*VRHKHS
Trigger: AGAGTGCTTATGCCTTACCAACCATGGCTTTTTCAT...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTATTGGCTTGTAAACAGTaGCCTTCTTGCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVLACKQ*PSCCVL
Trigger: AAGGACACAGCAAGAAGGCAACTGTTTACAAGCCAA...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAATGAAAAAGCCATGGTaGGTAAGGCATAAGCACTCT +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVMKKPW*VRHKHS
Trigger: AGAGTGCTTATGCCTTACCAACCATGGCTTTTTCAT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: AYFGKKCKREHNANTYDYSIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp AAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: KPILGRSARGNTMPTHMISIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...AATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000527591.5
ENST00000529345.6
CDS-3UTR CAA 90 bp AGAAAGCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGAACAACATCATTTATTaGCTCACAGTTCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RKPILGRSARGNTMPTHMNNIIY*LTVLEV
Trigger: AACCTCCAGAACTGTGAGCAAATAAATGATGTTGTT...CATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS CCA 90 bp AGTATATGGGCAATATTGAGGTATGGCAGAGAAATGAAAAAGCCATaGTTGGTAAGGCATAAGCACTCTGGAAACCTTTCTCTACATAAT +
Preference number: 5 (lower is better)
Translates to: SIWAILRYGREMKKP*LVRHKHSGNLSLHN
Trigger: ATTATGTAGAGAAAGGTTTCCAGAGTGCTTATGCCTTACCAACCATGGCTTTTTCATTTCTCTGCCATACCTCAATATTGCCCATATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529212.1
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAAGTATATGGGCAATATaGAGGTATGGCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVSIWAI*RYGREM
Trigger: CATTTCTCTGCCATACCTCAATATTGCCCATATACT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp GCCTATTTTGGGAAGAAGTGCAAGAGGGAACACAATGCCAACACATATGATTATAACAACATCATTTATTaGCTCACAGTTCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: AYFGKKCKREHNANTYDYNNIIY*LTVLEV
Trigger: AACCTCCAGAACTGTGAGCAAATAAATGATGTTGTT...ATAATCATATGTGTTGGCATTGTGTTCCCTCTTGCACTTCTTCCCAAAATAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS TCA 90 bp CAGAACAATTCCAAGAAGGAAGTGTTATCATTGCCATTTTACAGATaGCAAACGAAGGCTAGAGAGAATAAGGTTCTTTACATTCCACCT +
Preference number: 5 (lower is better)
Translates to: QNNSKKEVLSLPFYR*QTKARENKVLYIPP
Trigger: AGGTGGAATGTAAAGAACCTTATTCTCTCTAGCCTTCGTTTGTCATCTGTAAAATGGCAATGATAACACTTCCTTCTTGGAATTGTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525585.1
CDS-3UTR CAA 90 bp TTATTTTTCATCCAGGGTGTCTTCCGGAATAATTCATTCTTGCAACTAGGGGTAATACCCACTGCCATTTaGTTCTGCTTTTCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LFFIQGVFRNNSFLQLGVIPTAI*FCFSVN
Trigger: ATTAACAGAAAAGCAGAACAAAATGGCAGTGGGTAT...TACCCCTAGTTGCAAGAATGAATTATTCCGGAAGACACCCTGGATGAAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000267488.9
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp TACAGCTCCACAGAGAATTTTACAAAGATTGAAGGAATTCAATCAACGGAAGACATACCCACTGCCATTTaGTTCTGCTTTTCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: YSSTENFTKIEGIQSTEDIPTAI*FCFSVN
Trigger: ATTAACAGAAAAGCAGAACAAAATGGCAGTGGGTAT...GTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp ACTGGCACCAACTACACCAAATACATTTCTAATGTCAGGAACATATATTGCAAGATACCCACTGCCATTTaGTTCTGCTTTTCTGTTAAT +
Preference number: 5 (lower is better)
Translates to: TGTNYTKYISNVRNIYCKIPTAI*FCFSVN
Trigger: ATTAACAGAAAAGCAGAACAAAATGGCAGTGGGTAT...CTTGCAATATATGTTCCTGACATTAGAAATGTATTTGGTGTAGTTGGTGCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491344.7
ENST00000525723.6
CDS-3UTR CAA 90 bp AGAGGGAACACAATGCCAACACATATGATTATTAGTAGTGTTTGTCCATCAAGAAACAACATCATTTATTaGCTCACAGTTCTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RGNTMPTHMIISSVCPSRNNIIY*LTVLEV
Trigger: AACCTCCAGAACTGTGAGCAAATAAATGATGTTGTT...TCTTGATGGACAAACACTACTAATAATCATATGTGTTGGCATTGTGTTCCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000491344.7
ENST00000525723.6
ENST00000529345.6
CDS CAA 90 bp CCCCTGCCCTGCGCTCCAGTCGTCGGTCGCGCCAGAGGCGGAGCTTaGAGCCCGGCCCTTCCGGCATTCCGTACTTCACCAGGGCCTGGA +
Preference number: 6 (lower is better)
Translates to: PLPCAPVVGRARGGA*SPALPAFRTSPGPG
Trigger: TCCAGGCCCTGGTGAAGTACGGAATGCCGGAAGGGCCGGGCTCAAAGCTCCGCCTCTGGCGCGACCGACGACTGGAGCGCAGGGCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS TCA 72 bp GCGCTCCAGTCGTCGGTCGCGCCAGAGGCGGAGCTTTaGGCCCGGCCCTTCCGGCATTCCGTACTTCACCAG +
Preference number: 6 (lower is better)
Translates to: ALQSSVAPEAEL*ARPFRHSVLHQ
Trigger: CTGGTGAAGTACGGAATGCCGGAAGGGCCGGGCTCAAAGCTCCGCCTCTGGCGCGACCGACGACTGGAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS CAA 72 bp TGCGCTCCAGTCGTCGGTCGCGCCAGAGGCGGAGCTTaGAGCCCGGCCCTTCCGGCATTCCGTACTTCACCA +
Preference number: 6 (lower is better)
Translates to: CAPVVGRARGGA*SPALPAFRTSP
Trigger: TGGTGAAGTACGGAATGCCGGAAGGGCCGGGCTCAAAGCTCCGCCTCTGGCGCGACCGACGACTGGAGCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354886.6
CDS CAA 72 bp GCGGTCCTCCTTTTCTGGGTCTTATTTGGCAGGCACTaGAGGGAAGCCGGAGGGCGTCAGCGCGGGGAAGCG +
Preference number: 6 (lower is better)
Translates to: AVLLFWVLFGRH*REAGGRQRGEA
Trigger: CGCTTCCCCGCGCTGACGCCCTCCGGCTTCCCTCAAGTGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CAA 90 bp TGTCCCGGTGCGGTCCTCCTTTTCTGGGTCTTATTTGGCAGGCACTaGAGGGAAGCCGGAGGGCGTCAGCGCGGGGAAGCGAACACAGCC +
Preference number: 6 (lower is better)
Translates to: CPGAVLLFWVLFGRH*REAGGRQRGEANTA
Trigger: GGCTGTGTTCGCTTCCCCGCGCTGACGCCCTCCGGCTTCCCTCAAGTGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGCACCGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CAA 90 bp AGCCGGAGGGCGTCAGCGCGGGGAAGCGAACACAGCCCACTTACGTaGCTTAGCAACGGACTCAACTCTTCGGCCTCCGCTTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SRRASARGSEHSPLT*LSNGLNSSASASSG
Trigger: GCCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGTGTTCGCTTCCCCGCGCTGACGCCCTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS GCA 72 bp CCCAGGGTTCAGGCTCCAGCATCTCCCCTGTCCCGGTaGGGTCCTCCTTTTCTGGGTCTTATTTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: PRVQAPASPLSR*GPPFLGLIWQA
Trigger: TGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGATGCTGGAGCCTGAACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CAA 72 bp GCGTCAGCGCGGGGAAGCGAACACAGCCCACTTACGTaGCTTAGCAACGGACTCAACTCTTCGGCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: ASARGSEHSPLT*LSNGLNSSASA
Trigger: AGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGTGTTCGCTTCCCCGCGCTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS GCA 72 bp AACGGACTCAACTCTTCGGCCTCCGCTTCTTCAGGCTaGTGGACAGAGACATACCAGCCCCGCTCAGCGTTG +
Preference number: 6 (lower is better)
Translates to: NGLNSSASASSG*WTETYQPRSAL
Trigger: CAACGCTGAGCGGGGCTGGTATGTCTCTGTCCAGCAGCCTGAAGAAGCGGAGGCCGAAGAGTTGAGTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267488.9
ENST00000354886.6
ENST00000451406.5
ENST00000491344.7
ENST00000525723.6
ENST00000532148.5
ENST00000554304.5
CDS GCA 72 bp CGTCAGCGCGGGGAAGCGAACACAGCCCACTTACGTTaGTTAGCAACGGACTCAACTCTTCGGCCTCCGCTT +
Preference number: 6 (lower is better)
Translates to: RQRGEANTAHLR*LATDSTLRPPL
Trigger: AAGCGGAGGCCGAAGAGTTGAGTCCGTTGCTAAGCAACGTAAGTGGGCTGTGTTCGCTTCCCCGCGCTGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CCA 72 bp CAGCATCTCCCCTGTCCCGGTGCGGTCCTCCTTTTCTaGGTCTTATTTGGCAGGCACTTGAGGGAAGCCGGA +
Preference number: 6 (lower is better)
Translates to: QHLPCPGAVLLF*VLFGRHLREAG
Trigger: TCCGGCTTCCCTCAAGTGCCTGCCAAATAAGACCCAGAAAAGGAGGACCGCACCGGGACAGGGGAGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525723.6
CDS CCA 72 bp TTGCCTTCTTGCTGTGTCCTTGCGTGGCCTTTCCTCTaGGTGCACATCTCCATGGTATCTCTTCCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: LPSCCVLAWPFL*VHISMVSLPVV
Trigger: GACTACAGGAAGAGATACCATGGAGATGTGCACCCAGAGGAAAGGCCACGCAAGGACACAGCAAGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354886.6
ENST00000451406.5
CDS TCA 72 bp GAGAATAAGGTTCTTTACATTCCACCTCAGCTCCCATaGAAAGTCCTGATAGACCCCAAACGCTCCATAAAA +
Preference number: 6 (lower is better)
Translates to: ENKVLYIPPQLP*KVLIDPKRSIK
Trigger: TTTTATGGAGCGTTTGGGGTCTATCAGGACTTTTCATGGGAGCTGAGGTGGAATGTAAAGAACCTTATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525585.1
CDS CAA 72 bp TGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTaGTATTTCTGTGGGATCAGTGGTGATAACCCCTTT +
Preference number: 6 (lower is better)
Translates to: CVEVFVVFSDGS*YFCGISGDNPF
Trigger: AAAGGGGTTATCACCACTGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554304.5
CDS TCA 72 bp GGAAAAGCCTACCTCCACAGAGAATTTTACAAAGATTaGAGGAATTCAATCAACGGAAGACAGGTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: GKAYLHREFYKD*RNSINGRQVSQ
Trigger: TTGACTCACCTGTCTTCCGTTGATTGAATTCCTTCAATCTTTGTAAAATTCTCTGTGGAGGTAGGCTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525585.1
CDS TCA 72 bp TCCAAGAAGGAAGTGTTATCATTGCCATTTTACAGATaGCAAACGAAGGCTAGAGAGAATAAGGTTCTTTAC +
Preference number: 6 (lower is better)
Translates to: SKKEVLSLPFYR*QTKARENKVLY
Trigger: GTAAAGAACCTTATTCTCTCTAGCCTTCGTTTGTCATCTGTAAAATGGCAATGATAACACTTCCTTCTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525585.1
CDS CAA 90 bp AGGACCAGGACTCTTTTCTCTTGCACAGGAATAAAGGAACACTTTTaGAAATTCTGTACACCAGTTACTTTATACTATTTCAGATCACAA +
Preference number: 6 (lower is better)
Translates to: RTRTLFSCTGIKEHF*KFCTPVTLYYFRSQ
Trigger: TTGTGATCTGAAATAGTATAAAGTAACTGGTGTACAGAATTTCAAAAAGTGTTCCTTTATTCCTGTGCAAGAGAAAAGAGTCCTGGTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554072.1
CDS CCA 72 bp AGCATAATAATCCTTTATGACAGTCCAACAAACTGTTaGGAGAGAGTTAGTTACGTATTATACTCTAGTCTT +
Preference number: 6 (lower is better)
Translates to: SIIILYDSPTNC*ERVSYVLYSSL
Trigger: AAGACTAGAGTATAATACGTAACTAACTCTCTCCCAACAGTTTGTTGGACTGTCATAAAGGATTATTATGCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525585.1