RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC38A5 (Homo sapiens)

Ensembl gene IDs: ENSG00000017483

Ensembl transcript IDs: ENST00000413668.5, ENST00000416711.5, ENST00000429543.2, ENST00000440085.5, ENST00000441948.5, ENST00000480105.1, ENST00000488083.5, ENST00000494034.5, ENST00000497336.1, ENST00000595796.5, ENST00000615300.4, ENST00000619100.4, ENST00000620913.5, ENST00000622196.4

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGTTGGGGTTGGGATTAGGGCCATGATCCAAGCTTGGCATCCCTaGGGAGGAGGGAAGTGGGCCAGTCTGCAGCCTCTGCTGTCCCCC +
Preference number: 1 (lower is better)
Translates to: GVGVGIRAMIQAWHP*GGGKWASLQPLLSP
Trigger: GGGGGACAGCAGAGGCTGCAGACTGGCCCACTTCCCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGCCCTAATCCCAACCCCAACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTaGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTT +
Preference number: 1 (lower is better)
Translates to: EEAERTGLGKGSTRT*PPPPPPPPPPPPLL
Trigger: AAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
3UTR CCA 90 bp GAGTCAACTGTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCA +
Preference number: 1 (lower is better)
Translates to: ESTVNIWASQLLLSP*LGSPTRASLSIAVS
Trigger: TGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCACAGTTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR GCA 90 bp GTTGAGTCCTTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTATAGCACAGCCAAGTTGGAACTTCTT +
Preference number: 1 (lower is better)
Translates to: VESLAGESHESFTLH*CFIVAYSTAKLELL
Trigger: AAGAAGTTCCAACTTGGCTGTGCTATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCCCTGACCCCTCCATGTaGATGCGCACAGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAPDPSM*MRTGTW
Trigger: CCAGGTCCCTGTGCGCATGCACATGGAGGGGTCAGG...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR TCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR GCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 2 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR CAA 90 bp GTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTGCGCGGCAGAGCTCCGTATAGATGG +
Preference number: 2 (lower is better)
Translates to: VAVSPYMQNMAPMDT*ATACILRGRAPYRW
Trigger: CCATCTATACGGAGCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR CCA 90 bp GCCTCACAGCTGCTGTTGAGTCCTTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: ASQLLLSPWLGSPTRASLSERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...GAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR CCA 90 bp GAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGAGCATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 2 (lower is better)
Translates to: EHGPNGHVGHGLHPARQSIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...GCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGGAAGTGGGCCAGTCTaGAGCCTCTGCTGTCCCCCG +
Preference number: 2 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEGSGPV*SLCCPP
Trigger: CGGGGGACAGCAGAGGCTGCAGACTGGCCCACTTCC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LFFLFSPRVILTNSFSQETPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 2 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR TCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR GCA 90 bp AGTCCTTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCATTGCAAGGAAAAACAGCATaGAGGTCAGAGAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: SPWLGSPTRASLSIAVSLQGKTA*RSERDH
Trigger: GTGGTCTCTCTCTGACCTGCATGCTGTTTTTCCTTG...CAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: STSLFFLFSPRVILTNSFTPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCCCTGACCCCTCCATGTaGATGCGCACAGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: STSLFFLFSPRVILTNSFPDPSM*MRTGTW
Trigger: CCAGGTCCCTGTGCGCATGCACATGGAGGGGTCAGG...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR-3UTR CCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCCAGAGAGGACTGGGCTaGGCAAAGGCTCCACCAGGA +
Preference number: 2 (lower is better)
Translates to: STSLFFLFSPRVILTNSFQRGLG*AKAPPG
Trigger: TCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTG...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
3UTR CCA 72 bp GAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTaGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: ERTGLGKGSTRT*PPPPPPPPPPP
Trigger: AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
3UTR CCA 72 bp CAACCACGTTCATGGGAACCAGCCACCTCCACATGTTaGGCAGGAGGGACCCTAGGGAGCGGCCCTGACCCC +
Preference number: 3 (lower is better)
Translates to: QPRSWEPATSTC*AGGTLGSGPDP
Trigger: GGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
3UTR CCA 72 bp GCCCATACATGCAGAACATGGCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGCGCGGCAGAGCTCCGT +
Preference number: 3 (lower is better)
Translates to: AHTCRTWPQWTR*PRPASCAAELR
Trigger: ACGGAGCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR CAA 90 bp ACATGCAGAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: TCRTWPQWTRWPRPASCAASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...CGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR CAA 90 bp CAGAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGATCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCA +
Preference number: 3 (lower is better)
Translates to: QNMAPMDTLATACILRGRSIAVS*WPIAQP
Trigger: TGGCTGTGCTATAGGCCACAATGAAACAGCAATGGA...TCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR CCA 72 bp GTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATT +
Preference number: 3 (lower is better)
Translates to: VNIWASQLLLSP*LGSPTRASLSI
Trigger: AATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR GCA 72 bp TTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTATAGCACAGCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: LAGESHESFTLH*CFIVAYSTAKL
Trigger: CAACTTGGCTGTGCTATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
3UTR-3UTR CAA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCAGCCACCTCCACATGTaGGGCAGGAGGGACCCTAGG +
Preference number: 3 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSSHLHM*GRRDPR
Trigger: CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCT...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGCCACGGCCTGCATCCTaGGCTTGGAGGGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGPRPAS*AWRAGR
Trigger: TCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGG...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGGGGCACCCTCTCGGCTaGCTAGGCTCCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGGHPLG*LGSCSG
Trigger: TCCAGAGCAGGAGCCTAGGCAGCCGAGAGGGTGCCC...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCCACGGCCTGCATCCTaGGCTTGGAGGGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPPRPAS*AWRAGR
Trigger: TCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGGCCAGGAAGAAGATaGCCCCCGTGTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPGPGRR*PPCGPW
Trigger: CCATGGCCCACACGGGGGTCATCTTCTTCCTGGCCC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGGGCCAGGAAGAAGATaGCCCCCGTGTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPGPGRR*PPCGPW
Trigger: CCATGGCCCACACGGGGGTCATCTTCTTCCTGGCCC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGCACGACTGGCACAGTaGGGGTCACCGCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPARLAQ*GSPRAA
Trigger: TGCTGCTCGCGGTGACCCTCACTGTGCCAGTCGTGC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGGGCACCCTCTCGGCTaGCTAGGCTCCTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPGHPLG*LGSCSG
Trigger: TCCAGAGCAGGAGCCTAGGCAGCCGAGAGGGTGCCC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGGGAAAAGCAGCTGCTaGAGGGCCCGGCGGATAGGG +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPGKSSC*RARRIG
Trigger: CCCTATCCGCCGGGCCCTGCAGCAGCTGCTTTTCCC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCCACGGCCTGCATCCTaGGCTTGGAGGGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSPRPAS*AWRAGR
Trigger: TCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACGTTGGCCACGGCCTaGATCCTGCGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPTLATA*ILRLEG
Trigger: GCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGAAGTGGGCCAGTCTaGAGCCTCTGCTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPGSGPV*SLCCPP
Trigger: CGGGGGACAGCAGAGGCTGCAGACTGGCCCACTTCC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGAGGGAACAGCACGACTaGCACAGTGAGGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGREQHD*HSEGHR
Trigger: GCGGTGACCCTCACTGTGCCAGTCGTGCTGTTCCCT...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGGCGCACACAGAGGATaGGCGGGTCCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPGAHRG*AGPSGC
Trigger: ACAGCCAGAAGGACCCGCTCATCCTCTGTGTGCGCC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGCGCACACAGAGGATaGGCGGGTCCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPGAHRG*AGPSGC
Trigger: ACAGCCAGAAGGACCCGCTCATCCTCTGTGTGCGCC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGCATGTCGTGGCCAGCTaGAGGCCTTGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGHVVAS*RPCLGK
Trigger: TTTTCCCAGGCAAGGCCTTCAGCTGGCCACGACATG...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGGGAAAAGCAGCTGCTaGAGGGCCCGGCGGATAGGG +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSGKSSC*RARRIG
Trigger: CCCTATCCGCCGGGCCCTGCAGCAGCTGCTTTTCCC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGGAAGTGGGCCAGTCTaGAGCCTCTGCTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSGSGPV*SLCCPP
Trigger: CGGGGGACAGCAGAGGCTGCAGACTGGCCCACTTCC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGAGGACCCTAGATCTTaGGGGCCCCCAGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSEDPRS*GPPEGG
Trigger: GCCTCCCTCTGGGGGCCCCCAAGATCTAGGGTCCTC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620913.5
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCCTTCTGGCCCTaGGCGGGGGAAGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERPSFWP*AGEEVE
Trigger: CTCCACCTCTTCCCCCGCCCAGGGCCAGAAGGAGGG...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTCGTTTCCCTCCTTCTaGCCCTGGGCGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPSFPSF*PWAGEE
Trigger: CTCTTCCCCCGCCCAGGGCCAGAAGGAGGGAAACGA...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCTGCATCCTGCGCTTaGAGGGCCGGCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERPASCA*RAGRAP
Trigger: CGGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGG...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGACATGCGGCTCTaGCCTGTGGCCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPPDMRL*PVAQLA
Trigger: TGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGG...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCCACCTCCACATGTTaGGCAGGAGGGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPATSTC*AGGTLG
Trigger: CCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGCCACCTCCACATGTTaGGCAGGAGGGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPATSTC*AGGTLG
Trigger: CCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGCTCCTCTCAGCTCCTaGAGTGGCCGCAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPAPLSS*SGRNSD
Trigger: GTCTGAGTTGCGGCCACTTCAGGAGCTGAGAGGAGC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACAGCTGCTGTTaGGTCCTTGGCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPPHSCC*VLGWGV
Trigger: GACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGG...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGGCGCACACAGAGGATaGGCGGGTCCTTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSGAHRG*AGPSGC
Trigger: ACAGCCAGAAGGACCCGCTCATCCTCTGTGTGCGCC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGGCACGACTGGCACAGTaGGGGTCACCGCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERARLAQ*GSPRAA
Trigger: TGCTGCTCGCGGTGACCCTCACTGTGCCAGTCGTGC...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCCCCCGCAGGCCCGAATaGCCTCTGTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAPRRPE*PLSQLL
Trigger: GAGCAGCTGGGACAGAGGGCATTCGGGCCTGCGGGG...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCACGTTGGCCACGGCCTaGATCCTGCGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSTLATA*ILRLEG
Trigger: GCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGT...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGACGTTGGCCACGGCCTaGATCCTGCGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERTLATA*ILRLEG
Trigger: GCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGT...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATCAGTGTCCAGACATaGGGCTCTGGCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPISVQT*GSGLWP
Trigger: GGGCCACAGGCCAGAGCCGCATGTCTGGACACTGAT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSTPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGAAGTGGGCCAGTCTaGAGCCTCTGCTGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSGSGPV*SLCCPP
Trigger: CGGGGGACAGCAGAGGCTGCAGACTGGCCCACTTCC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCACCCCCGTGTGGGCCATaGCATAGGCCAGCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPPPCGP*HRPAPG
Trigger: TCCTGGGGCTGGCCTATGCCATGGCCCACACGGGGG...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSPQWTR*PRPASC
Trigger: GCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCAGAGAGGACTGGGCTaGGCAAAGGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPQRGLG*AKAPPG
Trigger: TCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGGGGGCGCCCCCTATCTaGACCCACTTGGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERGAPPI*THLEGD
Trigger: GTCTCCCTCCAAGTGGGTCCAGATAGGGGGCGCCCC...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGCCTGCATCCTGCGCTTaGAGGGCCGGCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRPASCA*RAGRAP
Trigger: CGGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGG...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGCCATGATCCAAGCTTaGCATCCCTGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPAMIQA*HPWGGG
Trigger: CCCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCCATGATCCAAGCTTaGCATCCCTGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPAMIQA*HPWGGG
Trigger: CCCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
3UTR CAA 72 bp AGCCCATACATGCAGAACATGGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTGCGCGGCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPYMQNMAPMDT*ATACILRGRAP
Trigger: CGGAGCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTTCCCCTCGAAATCCATaGACTGGACCGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPSPRNP*TGPACS
Trigger: GGAGCAAGCCGGTCCAGTTCATGGATTTCGAGGGGA...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR TCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGGGGCCAGGAAGAAGATaGCCCCCGTGTGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGGPGRR*PPCGPW
Trigger: CCATGGCCCACACGGGGGTCATCTTCTTCCTGGCCC...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGGCACGACTGGCACAGTaGGGGTCACCGCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGARLAQ*GSPRAA
Trigger: TGCTGCTCGCGGTGACCCTCACTGTGCCAGTCGTGC...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCATGTCGTGGCCAGCTaGAGGCCTTGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPHVVAS*RPCLGK
Trigger: TTTTCCCAGGCAAGGCCTTCAGCTGGCCACGACATG...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGCCTCAGAGGGTACAATaGGGAGGTAGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGPQRVQ*GGRRCW
Trigger: CCAGCATCTTCTACCTCCGCATTGTACCCTCTGAGG...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCCACGGCCTGCATCCTaGGCTTGGAGGGCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRPRPAS*AWRAGR
Trigger: TCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGACGTTGGCCACGGCCTaGATCCTGCGCTTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRTLATA*ILRLEG
Trigger: GCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGT...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGTCTTCCCCTCGAACTaGACGCAAGGAGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPVFPSN*TQGAKP
Trigger: GGGCTTTGCTCCTTGCGTGCAGTTCGAGGGGAAGAC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619100.4
CDS-3UTR CCA 90 bp GAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGAGCCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: EHGPNGHVGHGLHPARQSLLLSP*LGSPTR
Trigger: TCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAG...GCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTATGGCCACATGTCGTaGCCAGCTGAAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPYGHMS*PAEGLA
Trigger: GGCAAGGCCTTCAGCTGGCCACGACATGTGGCCATA...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGCAGGATCAGAGCTATaGCCACATGTCGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPAGSEL*PHVVAS
Trigger: GCTGGCCACGACATGTGGCCATAGCTCTGATCCTGC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCAGGATCAGAGCTATaGCCACATGTCGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPAGSEL*PHVVAS
Trigger: GCTGGCCACGACATGTGGCCATAGCTCTGATCCTGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTAGAACATGGCCCCAATaGACACGTTGGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPRTWPQ*TRWPRP
Trigger: AGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTAGAACATGGCCCCAATaGACACGTTGGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPRTWPQ*TRWPRP
Trigger: AGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCT...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCAGAGAGGACTGGGCTaGGCAAAGGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSQRGLG*AKAPPG
Trigger: TCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCAGACATGCGGCTCTaGCCTGTGGCCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERPDMRL*PVAQLA
Trigger: TGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGG...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTAGGAGGAAGAACAGCTaGAGGAGAAAGGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPRRKNS*RRKAGR
Trigger: CCGGCCTGCCTTTCTCCTCCAGCTGTTCTTCCTCCT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR TCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCGATGAGGCTGGGGGCTaGGGTGGACCCGATAACTCC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRADEAGG*GGPDNS
Trigger: GGAGTTATCGGGTCCACCTCAGCCCCCAGCCTCATC...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGCACTGCTGTAGAAGGTaGGGTATCCAAAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGHCCRR*GIQRLL
Trigger: CAGCAACCTTTGGATACCTCACCTTCTACAGCAGTG...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGCTGCCTAGGCTCCTaGTCTGGAGCGGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPGCLGS*SGAVLF
Trigger: AAAAAGTACCGCTCCAGAGCAGGAGCCTAGGCAGCC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCCTGCAGTTCCATCCTaGTCCTCTCAGCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPPAVPS*SSQLLK
Trigger: CTTCAGGAGCTGAGAGGAGCAGGATGGAACTGCAGG...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGTPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRTPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCACCTGACCCCTCCATGTaGATGCGCACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPPDPSM*MRTGTW
Trigger: CCAGGTCCCTGTGCGCATGCACATGGAGGGGTCAGG...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPSERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPSERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRPQWTR*PRPASC
Trigger: GCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGG...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCACCCCAATGGACACGTTaGCCACGGCCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPPQWTR*PRPASC
Trigger: GCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGG...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCCAAAGCACAGGGCCTaGATCTTGGGCCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPPKHRA*ILGQDK
Trigger: CTTATCCTGGCCCAAGATCCAGGCCCTGTGCTTTGG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAAAGCACAGGGCCTaGATCTTGGGCCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPPKHRA*ILGQDK
Trigger: CTTATCCTGGCCCAAGATCCAGGCCCTGTGCTTTGG...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGACATGCGGCTCTaGCCTGTGGCCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGPDMRL*PVAQLA
Trigger: TGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGG...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGCCACCTCCACATGTTaGGCAGGAGGGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRATSTC*AGGTLG
Trigger: CCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGC...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTAGGAGGAAGAACAGCTaGAGGAGAAAGGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSRRKNS*RRKAGR
Trigger: CCGGCCTGCCTTTCTCCTCCAGCTGTTCTTCCTCCT...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGAGGATGGGGAGTGCTaGAGGAGGAAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSEDGEC*RRKNSW
Trigger: CCAGCTGTTCTTCCTCCTCCAGCACTCCCCATCCTC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGAGCCCGGGCACACATTaGGACAGGGCACAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERSPGTH*DRAQGK
Trigger: CTTACCCTGTGCCCTGTCCCAATGTGTGCCCGGGCT...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619100.4
CDS-3UTR TCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGCTCCTCTCAGCTCCTaGAGTGGCCGCAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPAPLSS*SGRNSD
Trigger: GTCTGAGTTGCGGCCACTTCAGGAGCTGAGAGGAGC...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR TCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCCCTCACAGCTGCTGTTaGGTCCTTGGCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAPHSCC*VLGWGV
Trigger: GACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGG...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGAGCTCCGTATTCTGTGAGTCAACTGTaGACATCTGGGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: APMDTLATACILRGRAPYSVSQL*TSGPHS
Trigger: GCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGA...ATACGGAGCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTTCTGTGAGTCAACTGTaGACATCTGGGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPSVSQL*TSGPHS
Trigger: GCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGA...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCTGTGAGTCAACTGTaGACATCTGGGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPSVSQL*TSGPHS
Trigger: GCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGA...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGTGGGGGAAATGGCCTaGAAGATTGAGGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPVGEMA*KIEGVD
Trigger: GTCTACACCCTCAATCTTTCAGGCCATTTCCCCCAC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTGGGATTAGGGCCATaGTCCAAGCTTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPLGLGP*SKLGIP
Trigger: AGGGATGCCAAGCTTGGATCATGGCCCTAATCCCAA...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTGGGATTAGGGCCATaGTCCAAGCTTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPLGLGP*SKLGIP
Trigger: AGGGATGCCAAGCTTGGATCATGGCCCTAATCCCAA...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGCAGGGAAGAAGAGTTaGAGATGGAAGAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPAGKKS*RWKRLR
Trigger: TCGCAGCCTCTTCCATCTTCAACTCTTCTTCCCTGC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619100.4
CDS-3UTR TCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCAGGGAAGAAGAGTTaGAGATGGAAGAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPAGKKS*RWKRLR
Trigger: TCGCAGCCTCTTCCATCTTCAACTCTTCTTCCCTGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR GCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGACGACAGAAGCGCAATaGACAGCAGCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERTTEAQ*TAAGPG
Trigger: TCCTGGCCCTGCTGCTGTGCATTGCGCTTCTGTCGT...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCAGAGGGTACAATaGGGAGGTAGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPPQRVQ*GGRRCW
Trigger: CCAGCATCTTCTACCTCCGCATTGTACCCTCTGAGG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GGTCAGAGAGAGACCACTGGTGTACCCCAGGTAGCCCAAGTGTTTCATGAGGGCACGTTGGCCACGGCCTaGATCCTGCGCGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GQRETTGVPQVAQVFHEGTLATA*ILRGRA
Trigger: AGCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGT...GCCCTCATGAAACACTTGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCATCAGTGTCCAGACATaGGGCTCTGGCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAISVQT*GSGLWP
Trigger: GGGCCACAGGCCAGAGCCGCATGTCTGGACACTGAT...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGGAGCAGGACCACGACTaGGCAGGAAGCCCTCACGTT +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGEQDHD*AGSPHV
Trigger: AACGTGAGGGCTTCCTGCCCAGTCGTGGTCCTGCTC...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCATGAGCGGGTCCTTCTaGCTGTACATGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPMSGSF*LYMCSI
Trigger: GATGCTGCACATGTACAGCCAGAAGGACCCGCTCAT...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATGAGCGGGTCCTTCTaGCTGTACATGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPMSGSF*LYMCSI
Trigger: GATGCTGCACATGTACAGCCAGAAGGACCCGCTCAT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCTATGGCCACATGTCGTaGCCAGCTGAAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSYGHMS*PAEGLA
Trigger: GGCAAGGCCTTCAGCTGGCCACGACATGTGGCCATA...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCAGAACATGGCCCCAATaGACACGTTGGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSRTWPQ*TRWPRP
Trigger: AGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCT...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGCAGAGAGGACTGGGCTaGGCAAAGGCTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRQRGLG*AKAPPG
Trigger: TCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTG...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTATCTGGACCCACTTaGAGGGAGACAGCGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPLSGPT*RETAVC
Trigger: ACAAACCGCTGTCTCCCTCCAAGTGGGTCCAGATAG...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTACAGGGCCTGGATCTTaGGCCAGGATAAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPTGPGS*ARIRKA
Trigger: AGCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGT...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCGCCATGATCCAAGCTTaGCATCCCTGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAAMIQA*HPWGGG
Trigger: CCCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGC...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGAGGATGGGGAGTGCTaGAGGAGGAAGAACAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSEDGEC*RRKNSW
Trigger: CCAGCTGTTCTTCCTCCTCCAGCACTCCCCATCCTC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619100.4
CDS-3UTR TCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCTCCCCTCGAAATCCATaGACTGGACCGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRASPRNP*TGPACS
Trigger: GGAGCAAGCCGGTCCAGTTCATGGATTTCGAGGGGA...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTAATGGCCTGAAAGATTaGGGGTGTAGACCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPNGLKD*GCRPTA
Trigger: AGCTGTGGGTCTACACCCTCAATCTTTCAGGCCATT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCCACTGCTGTAGAAGGTaGGGTATCCAAAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPHCCRR*GIQRLL
Trigger: CAGCAACCTTTGGATACCTCACCTTCTACAGCAGTG...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTTGGGATTAGGGCCATaGTCCAAGCTTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSLGLGP*SKLGIP
Trigger: AGGGATGCCAAGCTTGGATCATGGCCCTAATCCCAA...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTTCTGGCTGTACATGTaGAGCATCTCCGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPFWLYM*SISAFT
Trigger: TGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAA...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTTCTGGCTGTACATGTaGAGCATCTCCGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPFWLYM*SISAFT
Trigger: TGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAA...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCAGCAGGGGAACAGGTaGAGGGGTAGTAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRQQGNR*RGSSQA
Trigger: AGCCTGGCTACTACCCCTGCACCTGTTCCCCTGCTG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSSERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGLLLSP*LGSPTR
Trigger: TCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAG...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGCAGGATCAGAGCTATaGCCACATGTCGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRAGSEL*PHVVAS
Trigger: GCTGGCCACGACATGTGGCCATAGCTCTGATCCTGC...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGAACATGGCCCCAATaGACACGTTGGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRARTWPQ*TRWPRP
Trigger: AGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCT...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGAGCCATACATGCAGAACATaGCCCCAATGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: EHGPNGHVGHGLHPARQSHTCRT*PQWTRW
Trigger: CCAACGTGTCCATTGGGGCCATGTTCTGCATGTATG...GCTCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCATACATGCAGAACATaGCCCCAATGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPHTCRT*PQWTRW
Trigger: CCAACGTGTCCATTGGGGCCATGTTCTGCATGTATG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTACAGGGCCTGGATCTTaGGCCAGGATAAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSTGPGS*ARIRKA
Trigger: AGCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGT...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCATCCAAAGGTTGCTGTaGGCCCATACATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPIQRLL*AHTCRT
Trigger: TGTTCTGCATGTATGGGCTCACAGCAACCTTTGGAT...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATCCAAAGGTTGCTGTaGGCCCATACATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPIQRLL*AHTCRT
Trigger: TGTTCTGCATGTATGGGCTCACAGCAACCTTTGGAT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCACTGCTGTAGAAGGTaGGGTATCCAAAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSHCCRR*GIQRLL
Trigger: CAGCAACCTTTGGATACCTCACCTTCTACAGCAGTG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGACGACAGAAGCGCAATaGACAGCAGCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRTTEAQ*TAAGPG
Trigger: TCCTGGCCCTGCTGCTGTGCATTGCGCTTCTGTCGT...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTCAAGGAAAAACAGCATaGAGGTCAGAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPQGKTA*RSERDH
Trigger: GTGGTCTCTCTCTGACCTGCATGCTGTTTTTCCTTG...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGGCTGCCTAGGCTCCTaGTCTGGAGCGGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRGCLGS*SGAVLF
Trigger: AAAAAGTACCGCTCCAGAGCAGGAGCCTAGGCAGCC...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTCATCTTTGGATCCTaGAGTTCCATCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPFIFGS*SSILLL
Trigger: GAGGAGCAGGATGGAACTGCAGGATCCAAAGATGAA...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGSFTLH*CFIVAY
Trigger: ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCT...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCCCTCAGAGGGTACAATaGGGAGGTAGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSPQRVQ*GGRRCW
Trigger: CCAGCATCTTCTACCTCCGCATTGTACCCTCTGAGG...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCA +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPEVSKG*CEPIHA
Trigger: TGCATGTATGGGCTCACAGCAACCTTTGGATACCTC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPEVSKG*CEPIHA
Trigger: TGCATGTATGGGCTCACAGCAACCTTTGGATACCTC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCTCGTGGAAACACCTaGAGAAAGGCAACAGGCAAT +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSARGNT*RKATGN
Trigger: ATTGCCTGTTGCCTTTCTGCAGGTGTTTCCACGAGC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR GCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGATGGCAGAAAAAGGTaGAGAGAGGAGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPDGRKR*REETER
Trigger: TCTCTCTGTCTCCTCTCTGCACCTTTTTCTGCCATC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCTCGAAATCCATGAACTaGACCGGCTTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSSKSMN*TGLLPG
Trigger: TCCTGGGAGCAAGCCGGTCCAGTTCATGGATTTCGA...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCATGAGCGGGTCCTTCTaGCTGTACATGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSMSGSF*LYMCSI
Trigger: GATGCTGCACATGTACAGCCAGAAGGACCCGCTCAT...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGATATCCCGGATGGTTaGCACACAGATGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSDIPDG*HTDDKD
Trigger: GTCCTTGTCATCTGTGTGCCAACCATCCGGGATATC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TCAACTGTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTTGGCTGGGGAGTCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: STVNIWASQLLLSPWLGSPQWTR*PRPASC
Trigger: GCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGG...ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCACAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp CCTTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCATTGTGGCCTCACAGCTGCTGTTaGGTCCTTGGCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PWLGSPTRASLSIAVSLWPHSCC*VLGWGV
Trigger: GACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGG...CCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp CAGAACATGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTGCGCGGCAGAATCCAAAGGTTGCTGTaGGCCCATACATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: QNMAPMDTLATACILRGRIQRLL*AHTCRT
Trigger: TGTTCTGCATGTATGGGCTCACAGCAACCTTTGGAT...TCTGCCGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGTTGGGATTAGGGCCATaGTCCAAGCTTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGLGLGP*SKLGIP
Trigger: AGGGATGCCAAGCTTGGATCATGGCCCTAATCCCAA...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCAAGGAAAAACAGCATaGAGGTCAGAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSQGKTA*RSERDH
Trigger: GTGGTCTCTCTCTGACCTGCATGCTGTTTTTCCTTG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGTTCTGGCTGTACATGTaGAGCATCTCCGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERFWLYM*SISAFT
Trigger: TGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAA...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCTCAGAGGGTACAATaGGGAGGTAGAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGPQRVQ*GGRRCW
Trigger: CCAGCATCTTCTACCTCCGCATTGTACCCTCTGAGG...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCATCGAAATCCATGAACTaGACCGGCTTGCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPSKSMN*TGLLPG
Trigger: TCCTGGGAGCAAGCCGGTCCAGTTCATGGATTTCGA...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGTAGGGATAGGCTCGTaGAAACACCTGCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRVGIGS*KHLQKG
Trigger: GCCTTTCTGCAGGTGTTTCCACGAGCCTATCCCTAC...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGTCAGAAACAAACAGGTaGGTAGGGATAGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERSETNR*VGIGSW
Trigger: CCACGAGCCTATCCCTACCCACCTGTTTGTTTCTGA...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAACAGGGCCTGGATCTTaGGCCAGGATAAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPTGPGS*ARIRKA
Trigger: AGCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGT...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCCAAAGCACAGGGCCTaGATCTTGGGCCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRPKHRA*ILGQDK
Trigger: CTTATCCTGGCCCAAGATCCAGGCCCTGTGCTTTGG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGCACTGCTGTAGAAGGTaGGGTATCCAAAGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRHCCRR*GIQRLL
Trigger: CAGCAACCTTTGGATACCTCACCTTCTACAGCAGTG...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCCAAGGAAAAACAGCATaGAGGTCAGAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSQGKTA*RSERDH
Trigger: GTGGTCTCTCTCTGACCTGCATGCTGTTTTTCCTTG...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPSFTLH*CFIVAY
Trigger: ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCT...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCA +
Preference number: 4 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSEVSKG*CEPIHA
Trigger: TGCATGTATGGGCTCACAGCAACCTTTGGATACCTC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGATATCCCGGATGGTTaGCACACAGATGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPDIPDG*HTDDKD
Trigger: GTCCTTGTCATCTGTGTGCCAACCATCCGGGATATC...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCACATACATGCAGAACATaGCCCCAATGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPHTCRT*PQWTRW
Trigger: CCAACGTGTCCATTGGGGCCATGTTCTGCATGTATG...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGCAGGATGGGATGGATaGCAGAAAAAGGTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPAGWDG*QKKVQR
Trigger: TCTCTGCACCTTTTTCTGCCATCCATCCCATCCTGC...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000595796.5
3UTR CAA 72 bp TGTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CEHLGLTAAVES*AGESHESFTLH
Trigger: ATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGGAACTTCTTGTAGATaGCCGAAACAAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPGTSCR*PKQGKT
Trigger: TGTTTTTCCTTGTTTCGGTCATCTACAAGAAGTTCC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGATCCAAAGGTTGCTGTaGGCCCATACATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGIQRLL*AHTCRT
Trigger: TGTTCTGCATGTATGGGCTCACAGCAACCTTTGGAT...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGATCCAAAGGTTGCTGTaGGCCCATACATGCAGAACA +
Preference number: 4 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRIQRLL*AHTCRT
Trigger: TGTTCTGCATGTATGGGCTCACAGCAACCTTTGGAT...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCCAAGGAAAAACAGCATaGAGGTCAGAGAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAQGKTA*RSERDH
Trigger: GTGGTCTCTCTCTGACCTGCATGCTGTTTTTCCTTG...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCATACATGCAGAACATaGCCCCAATGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRHTCRT*PQWTRW
Trigger: CCAACGTGTCCATTGGGGCCATGTTCTGCATGTATG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR TCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGCACGACTGGCACAGTaGGGGTCACCGCGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEARLAQ*GSPRAA
Trigger: TGCTGCTCGCGGTGACCCTCACTGTGCCAGTCGTGC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGGGAAAAGCAGCTGCTaGAGGGCCCGGCGGATAGGG +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEGKSSC*RARRIG
Trigger: CCCTATCCGCCGGGCCCTGCAGCAGCTGCTTTTCCC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp GCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCATTGTGGCCTATTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGESHESFTLHCCFIVAYSERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CCA 90 bp GACATCTGTGAGTCAACTGTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTAGAACATGGCCCCAATaGACACGTTGGCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: DICESTVNIWASQLLLSPRTWPQ*TRWPRP
Trigger: AGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCT...AGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGATGAGGCTGGGGGCTaGGGTGGACCCGATAACTCC +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEDEAGG*GGPDNS
Trigger: GGAGTTATCGGGTCCACCTCAGCCCCCAGCCTCATC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRASFTLH*CFIVAY
Trigger: ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCT...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp AAGGTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTTGGCCTCAAGAACCAGTCCCTaGAATACCAGCACAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KVAVSPYMQNMAPMDTLASRTSP*NTSTGQ
Trigger: CTGACCTGTGCTGGTATTGCAGGGACTGGTTCTTGA...GGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCCTGACCCCTCCATGTaGATGCGCACAGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEPDPSM*MRTGTW
Trigger: CCAGGTCCCTGTGCGCATGCACATGGAGGGGTCAGG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCCTGCATCCTGCGCTTaGAGGGCCGGCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSPASCA*RAGRAP
Trigger: CGGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGG...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCGGAACTTCTTGTAGATaGCCGAAACAAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAGTSCR*PKQGKT
Trigger: TGTTTTTCCTTGTTTCGGTCATCTACAAGAAGTTCC...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR GCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGGGAAAAGCAGCTGCTaGAGGGCCCGGCGGATAGGG +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSGKSSC*RARRIG
Trigger: CCCTATCCGCCGGGCCCTGCAGCAGCTGCTTTTCCC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCCAGACATGCGGCTCTaGCTGTGGCCCAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEPDMRL*LWPSWQ
Trigger: TTGCCAACTGGGCCACAGGCAGAGCCGCATGTCTGG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622196.4
CDS-3UTR CCA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGAGGGAACAGCACGACTaGCACAGTGAGGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEREQHD*HSEGHR
Trigger: GCGGTGACCCTCACTGTGCCAGTCGTGCTGTTCCCT...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGCCATGATCCAAGCTTaGCATCCCTGGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEAMIQA*HPWGGG
Trigger: CCCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCATGTCGTGGCCAGCTaGAGGCCTTGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEHVVAS*RPCLGK
Trigger: TTTTCCCAGGCAAGGCCTTCAGCTGGCCACGACATG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGACGACAGAAGCGCAATaGACAGCAGCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQETTEAQ*TAAGPG
Trigger: TCCTGGCCCTGCTGCTGTGCATTGCGCTTCTGTCGT...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp GGTCAGAGAGAGACCACTGGTGTACCCCAGGTAGCCCAAGTGTTTCATGAGGGCAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GQRETTGVPQVAQVFHEGSFTLH*CFIVAY
Trigger: ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCT...GCCCTCATGAAACACTTGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR GCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCACCCCTCCATGTGCATaGGCACAGGGACCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSTPPCA*AQGPGP
Trigger: TGGCCCAGGTCCCTGTGCGCATGCACATGGAGGGGT...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCCAGTCTGCAGCCTCTaGTGTCCCCCGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSPVCSL*CPPPLT
Trigger: TGTCAGAGGCGGGGGACAGCAGAGGCTGCAGACTGG...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQELLLSP*LGSPTR
Trigger: TCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCCTCACAGCTGCTGTTaGGTCCTTGGCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSPHSCC*VLGWGV
Trigger: GACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGG...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGATGAGGCTGGGGGCTaGGGTGGACCCGATAACTCC +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFDEAGG*GGPDNS
Trigger: GGAGTTATCGGGTCCACCTCAGCCCCCAGCCTCATC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp ATCTGTGAGTCAACTGTGAACATCTGGGCCTCACAGCTGCTGTTGAGTCCTTGGGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCA +
Preference number: 4 (lower is better)
Translates to: ICESTVNIWASQLLLSPWEVSKG*CEPIHA
Trigger: TGCATGTATGGGCTCACAGCAACCTTTGGATACCTC...CCAAGGACTCAACAGCAGCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGAGCAGGACCACGACTaGGCAGGAAGCCCTCACGTT +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSEQDHD*AGSPHV
Trigger: AACGTGAGGGCTTCCTGCCCAGTCGTGGTCCTGCTC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGTCAGAGAGAGACCACTaGTGTACCCCAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQESERDH*CTPGSP
Trigger: TGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGA...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFPQWTR*PRPASC
Trigger: GCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGG...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCCAAAGCACAGGGCCTaGATCTTGGGCCAGGATAAG +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEPKHRA*ILGQDK
Trigger: CTTATCCTGGCCCAAGATCCAGGCCCTGTGCTTTGG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGCCACCTCCACATGTTaGGCAGGAGGGACCCTAGGG +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFATSTC*AGGTLG
Trigger: CCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCAGCCCGGGCACACATTaGGACAGGGCACAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSSPGTH*DRAQGK
Trigger: CTTACCCTGTGCCCTGTCCCAATGTGTGCCCGGGCT...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR TCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCATGTCGTGGCCAGCTaGAGGCCTTGCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSHVVAS*RPCLGK
Trigger: TTTTCCCAGGCAAGGCCTTCAGCTGGCCACGACATG...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGCTGTCCCCCGCCTCTaGCAACCACGTTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFAVPRL*QPRSWE
Trigger: TTCCCATGAACGTGGTTGTCAGAGGCGGGGGACAGC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCATCAGTGTCCAGACATaGGGCTCTGGCCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFISVQT*GSGLWP
Trigger: GGGCCACAGGCCAGAGCCGCATGTCTGGACACTGAT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGATGAGCGGGTCCTTCTaGCTGTACATGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEMSGSF*LYMCSI
Trigger: GATGCTGCACATGTACAGCCAGAAGGACCCGCTCAT...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGGGAACAGCACGACTaGCACAGTGAGGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFREQHD*HSEGHR
Trigger: GCGGTGACCCTCACTGTGCCAGTCGTGCTGTTCCCT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCTATGGCCACATGTCGTaGCCAGCTGAAGGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSYGHMS*PAEGLA
Trigger: GGCAAGGCCTTCAGCTGGCCACGACATGTGGCCATA...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGCAGGATCAGAGCTATaGCCACATGTCGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSAGSEL*PHVVAS
Trigger: GCTGGCCACGACATGTGGCCATAGCTCTGATCCTGC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
3UTR CAA 72 bp AGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCAAGTTGGAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPTRASLSIAVS*WPIAQPSWNFL
Trigger: CAAGAAGTTCCAACTTGGCTGTGCTATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCACGACAGAAGCGCAATaGACAGCAGCAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFTTEAQ*TAAGPG
Trigger: TCCTGGCCCTGCTGCTGTGCATTGCGCTTCTGTCGT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCCTGCAGTTCCATCCTaGTCCTCTCAGCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSPAVPS*SSQLLK
Trigger: CTTCAGGAGCTGAGAGGAGCAGGATGGAACTGCAGG...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGTTCTGGCTGTACATGTaGAGCATCTCCGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEFWLYM*SISAFT
Trigger: TGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAA...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGTCTTCCCCTCGAACTaGACGCAAGGAGCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFVFPSN*TQGAKP
Trigger: GGGCTTTGCTCCTTGCGTGCAGTTCGAGGGGAAGAC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCATCAGTGTCCAGACATaGGGCTCTGCCTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFISVQT*GSACGP
Trigger: TGGGCCACAGGCAGAGCCGCATGTCTGGACACTGAT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622196.4
CDS-3UTR CCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCCTGCTGTTGAGTCCTTaGCTGGGGAGTCCCACGAGA +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFLLLSP*LGSPTR
Trigger: TCTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAG...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGCATACATGCAGAACATaGCCCCAATGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEHTCRT*PQWTRW
Trigger: CCAACGTGTCCATTGGGGCCATGTTCTGCATGTATG...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp AGGTATCCAAAGGTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACGGAACTTCTTGTAGATaGCCGAAACAAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: RYPKVAVSPYMQNMAPMDGTSCR*PKQGKT
Trigger: TGTTTTTCCTTGTTTCGGTCATCTACAAGAAGTTCC...GTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTTTGGATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR TCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCTCTGTGAGTCAACTGTaGACATCTGGGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSSVSQL*TSGPHS
Trigger: GCTGTGAGGCCCAGATGTTCACAGTTGACTCACAGA...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGTTCATCTTTGGATCCTaGAGTTCCATCCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEFIFGS*SSILLL
Trigger: GAGGAGCAGGATGGAACTGCAGGATCCAAAGATGAA...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR GCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEEVSKG*CEPIHA
Trigger: TGCATGTATGGGCTCACAGCAACCTTTGGATACCTC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGATATCCCGGATGGTTaGCACACAGATGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSDIPDG*HTDDKD
Trigger: GTCCTTGTCATCTGTGTGCCAACCATCCGGGATATC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGGAACTTCTTGTAGATaGCCGAAACAAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEGTSCR*PKQGKT
Trigger: TGTTTTTCCTTGTTTCGGTCATCTACAAGAAGTTCC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CCA 90 bp CTCCATTGCTGTTTCATTGTGGCCTATAGCACAGCCAAGTTGGAACTTCTTGTAATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: LHCCFIVAYSTAKLELLVIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...TACAAGAAGTTCCAACTTGGCTGTGCTATAGGCCACAATGAAACAGCAATGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCATTGCTGTTTCATTGTaGCCTATAGCACAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSIAVSL*PIAQPS
Trigger: ACTTGGCTGTGCTATAGGCCACAATGAAACAGCAAT...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR TCA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGGAACTTCTTGTAGATaGCCGAAACAAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSGTSCR*PKQGKT
Trigger: TGTTTTTCCTTGTTTCGGTCATCTACAAGAAGTTCC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR GCA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCTTCACTCTCCATTaGTGTTTCATTGTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: STSLFFLFSPRVILTNSFSFTLH*CFIVAY
Trigger: ATAGGCCACAATGAAACAGCAATGGAGAGTGAAGCT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTaGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRT*PPPPPPPPPPPPLG
Trigger: CCCGAGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497336.1
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCCTGCATCCTGCGCTaGGAGGGCCGGCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPACILR*EGRQSS
Trigger: GGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCCTGCATCCTGCGCTaGGAGGGCCGGCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSACILR*EGRQSS
Trigger: GGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPAPMDT*ATACIL
Trigger: CAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPAPMDT*ATACIL
Trigger: CAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPAAVES*AGESHE
Trigger: CTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPAAVES*AGESHE
Trigger: CTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSAPMDT*ATACIL
Trigger: CAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCGCCTGCATCCTGCGCTaGGAGGGCCGGCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSHGVGVGIRAACILR*EGRQSS
Trigger: GGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGC...GGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GCAGGAGGGACCCTAGGGAGCGGCCCTGACCCCTCCATGTGCATGCGCACAGGGCACAGGGCCTGGATCTaGGGCCAGGATAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: AGGTLGSGPDPSMCMRTGHRAWI*GQDKKG
Trigger: GCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGTG...CCCTGTGCGCATGCACATGGAGGGGTCAGGGCCGCTCCCTAGGGTCCCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTAGCCACCTCCACATGTaGGGCAGGAGGGACCCTAGG +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPSHLHM*GRRDPR
Trigger: CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCT...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCAGCCACCTCCACATGTaGGGCAGGAGGGACCCTAGG +
Preference number: 5 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPSHLHM*GRRDPR
Trigger: CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCT...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTAGCCACCTCCACATGTaGGGCAGGAGGGACCCTAGG +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPSHLHM*GRRDPR
Trigger: CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCT...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCGGCCATGATCCAAGCTaGGCATCCCTGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPGHDPS*ASLGRR
Trigger: CCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGCC...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGGCCATGATCCAAGCTaGGCATCCCTGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSGHDPS*ASLGRR
Trigger: CCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGCC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGAAGCCCTCACGTTCTaGCCTGTAGCCCACAGCATC +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPEALTF*PVAHSI
Trigger: GATGCTGTGGGCTACAGGCAAGAACGTGAGGGCTTC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERAAVES*AGESHE
Trigger: CTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGC...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCCCTATCTGGACCCACTaGGAGGGAGACAGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPPIWTH*EGDSGL
Trigger: CAAACCGCTGTCTCCCTCCAAGTGGGTCCAGATAGG...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CAA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCATGATCCAAGCTaGGCATCCCTGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSGHDPS*ASLGRR
Trigger: CCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGCC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS CCA 90 bp GGACCTGGGCCAGCAGGGCCTGATCAGTGTCCAGACATGCGGCTCTaGCCTGTGGCCCAGTTGGCAAACATAAAGCCTAGACTGACGGCC +
Preference number: 5 (lower is better)
Translates to: GPGPAGPDQCPDMRL*PVAQLANIKPRLTA
Trigger: GGCCGTCAGTCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGGACACTGATCAGGCCCTGCTGGCCCAGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGATGAACTGGACCGGCTaGCTCCCAGGAGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERMNWTG*LPGAGP
Trigger: TGGTCCTGCTCCTGGGAGCAAGCCGGTCCAGTTCAT...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTCACAGGGCCTGGATCTaGGGCCAGGATAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSHRAWI*GQDKKG
Trigger: GCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGTG...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 90 bp CTCCCAGCCCCCTCCTATGCATGTCCCTTTCACCTCCAGCCATCCTaGAGTGAGCACTCCCTCCTTGGAGTGCTCCCTCTCTCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LPAPSYACPFHLQPS*SEHSLLGVLPLSLA
Trigger: AGCTAGGGAGAGAGGGAGCACTCCAAGGAGGGAGTGCTCACTCCAGGATGGCTGGAGGTGAAAGGGACATGCATAGGAGGGGGCTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS-3UTR CAA 90 bp ACCACGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGATGAACTGGACCGGCTaGCTCCCAGGAGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: TTFMGTSHLHMLGRRDPRMNWTG*LPGAGP
Trigger: TGGTCCTGCTCCTGGGAGCAAGCCGGTCCAGTTCAT...CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGGGCTCCATTCATCTTaGGATCCTGCAGTTCCATCC +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPGLHSS*DPAVPS
Trigger: GGATGGAACTGCAGGATCCAAAGATGAATGGAGCCC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRAAVES*AGESHE
Trigger: CTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGC...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCACAGGGCCTGGATCTaGGGCCAGGATAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERHRAWI*GQDKKG
Trigger: GCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGTG...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp ATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: MGTSHLHMLGRRDPRERPWPVAQ*ANIKPR
Trigger: TCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCA...GGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTTGGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPWPVAQ*ANIKPR
Trigger: TCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCA...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTCTGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPLPVAQ*ANIKPR
Trigger: TCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCAG...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622196.4
CDS GCA 90 bp GCGGGTCCTTCTGGCTGTACATGTGCAGCATCTCCGCCTTCACACTaGCTGGGCCATGAGACAGAGGGTACGGGATGCAGGATGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGPSGCTCAASPPSH*LGHETEGTGCRMWR
Trigger: TCTCCACATCCTGCATCCCGTACCCTCTGTCTCATGGCCCAGGCAGTGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAAGGACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480105.1
ENST00000615300.4
CDS CCA 90 bp AGGCTCGGATGCCTGCAATACCAGCACAGGTCAGCAGGAGGTGGATaGAGTAGGACGACAGAAGCGCAATGCACAGCAGCAGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RLGCLQYQHRSAGGG*SRTTEAQCTAAGPG
Trigger: TCCTGGCCCTGCTGCTGTGCATTGCGCTTCTGTCGTCCTACTCCATCCACCTCCTGCTGACCTGTGCTGGTATTGCAGGCATCCGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000413668.5
ENST00000416711.5
ENST00000429543.2
ENST00000440085.5
ENST00000441948.5
ENST00000488083.5
ENST00000497336.1
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 90 bp TCTTCCCCTCGAACTGCACGCAAGGAGCAAAGCCCGGGCACACATTaGGACAGGGCACAGGGTAAGGAGACTAATGCCAGGGCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSPRTARKEQSPGTH*DRAQGKETNARARE
Trigger: TTCCCTGGCCCTGGCATTAGTCTCCTTACCCTGTGCCCTGTCCCAATGTGTGCCCGGGCTTTGCTCCTTGCGTGCAGTTCGAGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR CAA 90 bp GGTCAGAGAGAGACCACTGGTGTACCCCAGGTAGCCCAAGTGTTTCATGAGGGCGCTGCTGTTGAGTCCTaGGCTGGGGAGTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: GQRETTGVPQVAQVFHEGAAVES*AGESHE
Trigger: CTCGTGGGACTCCCCAGCCAAGGACTCAACAGCAGC...GCCCTCATGAAACACTTGGGCTACCTGGGGTACACCAGTGGTCTCTCTCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPSIAVS*WPIAQP
Trigger: TGGCTGTGCTATAGGCCACAATGAAACAGCAATGGA...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGCCCTGAGCTTCACTCTCCATaGCTGTTTCATTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: WEPATSTCWAGGTLGSGPELHSP*LFHCGL
Trigger: TAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTC...AGGGCCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GGCAAAGGCTCCACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGAGCTTCACTCTCCATaGCTGTTTCATTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: GKGSTRTWPPPPPPPPPPELHSP*LFHCGL
Trigger: TAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTC...AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTGGAGCCTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CCAAAGGTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTTGGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: PKVAVSPYMQNMAPMDTLAPMDT*ATACIL
Trigger: CAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC...CAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CAA 90 bp TCCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGCACAGGGCCTGGATCTaGGGCCAGGATAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSHGVGVGIRHRAWI*GQDKKG
Trigger: GCCTTTCTTATCCTGGCCCAAGATCCAGGCCCTGTG...CCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp TTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGGTGGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGA +
Preference number: 5 (lower is better)
Translates to: FMGTSHLHMLGRRDPRERWPVAQ*ANIKPR
Trigger: TCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCA...CCGCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp GAGGAGGCAGAGAGGACTGGGCTGGGCAAAGGCTCCACCAGGACCTGGCCTCCTAAACTAGGACAAACTTaGGAGGGAGCAGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: EEAERTGLGKGSTRTWPPKLGQT*EGAAGS
Trigger: ACTTCCAGCTGCTCCCTCCAAAGTTTGTCCTAGTTT...AGGAGGCCAGGTCCTGGTGGAGCCTTTGCCCAGCCCAGTCCTCTCTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR CAA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGGACATGGCCCCAACATaGTGCAGACAGATGACTGTG +
Preference number: 5 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGDMAPT*CRQMTV
Trigger: CACAGTCATCTGTCTGCACAATGTTGGGGCCATGTC...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp CCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGCCAGGGCTCCATTCATCTTaGGATCCTGCAGTTCCATCC +
Preference number: 5 (lower is better)
Translates to: PLLPPPPPPMGLGLGLGPGLHSS*DPAVPS
Trigger: GGATGGAACTGCAGGATCCAAAGATGAATGGAGCCC...TGGCCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSSIAVS*WPIAQP
Trigger: TGGCTGTGCTATAGGCCACAATGAAACAGCAATGGA...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CCTTGGCTGGGGAGTCCCACGAGAGCTTCACTCTCCATTGCTGTTTCATTGTGGGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: PWLGSPTRASLSIAVSLWASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...CCACAATGAAACAGCAATGGAGAGTGAAGCTCTCGTGGGACTCCCCAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CAA 90 bp CACCAGGACCTGGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTAAACTAGGACAAACTTaGGAGGGAGCAGCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: HQDLASSSSSSSSSSSSSKLGQT*EGAAGS
Trigger: ACTTCCAGCTGCTCCCTCCAAAGTTTGTCCTAGTTT...AGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCCAGGTCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS-3UTR CAA 90 bp CGTTCATGGGAACCAGCCACCTCCACATGTTGGGCAGGAGGGACCCTAGGGAGCGAGCTTCACTCTCCATaGCTGTTTCATTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: RSWEPATSTCWAGGTLGSELHSP*LFHCGL
Trigger: TAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTC...GCTCCCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCTGGTTCCCATGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS-3UTR CAA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGCCTGCATCCTGCGCTaGGAGGGCCGGCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEACILR*EGRQSS
Trigger: GGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp CCTCCTCTTCTTCCTCCTCCTCCTCCTCCCATGGGGTTGGGGTTGGGATTAGGGTCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: PPLLPPPPPPMGLGLGLGSIAVS*WPIAQP
Trigger: TGGCTGTGCTATAGGCCACAATGAAACAGCAATGGA...CCCTAATCCCAACCCCAACCCCATGGGAGGAGGAGGAGGAGGAAGAAGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
CDS TCA 90 bp GGGAGACAGCGGTTTGTTTGTGTGTTGATGGTGGGGGAAATGGCCTaGAAGATTGAGGGTGTAGACCCACAGCTAGAGAGAGTGACAGGC +
Preference number: 5 (lower is better)
Translates to: GRQRFVCVLMVGEMA*KIEGVDPQLERVTG
Trigger: GCCTGTCACTCTCTCTAGCTGTGGGTCTACACCCTCAATCTTTCAGGCCATTTCCCCCACCATCAACACACAAACAAACCGCTGTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS GCA 90 bp TTCCCAATAGTGCTCTTTCCATCTGTCTGGAGAATGCTCCCTCTATaGCAGCCTCTGTTTGAGTGCTCCCTGTCTTCCTGGACCCTGCTG +
Preference number: 5 (lower is better)
Translates to: FPIVLFPSVWRMLPL*QPLFECSLSSWTLL
Trigger: CAGCAGGGTCCAGGAAGACAGGGAGCACTCAAACAGAGGCTGGCATAGAGGGAGCATTCTCCAGACAGATGGAAAGAGCACTATTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS CCA 90 bp AGACAGGGAGAAAGGGACACACAGGCAGACTCAGAAACAAACAGGTaGGTAGGGATAGGCTCGTGGAAACACCTGCAGAAAGGCAACAGG +
Preference number: 5 (lower is better)
Translates to: RQGERDTQADSETNR*VGIGSWKHLQKGNR
Trigger: CCTGTTGCCTTTCTGCAGGTGTTTCCACGAGCCTATCCCTACCCACCTGTTTGTTTCTGAGTCTGCCTGTGTGTCCCTTTCTCCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CAA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGGCCATGATCCAAGCTaGGCATCCCTGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEGHDPS*ASLGRR
Trigger: CCTCCTCCCCAGGGATGCCAAGCTTGGATCATGGCC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS GCA 90 bp CATCTCCGCCTTCACACTGCTGTAGAAGGTGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTT +
Preference number: 5 (lower is better)
Translates to: HLRLHTAVEGEVSKG*CEPIHAEHGPNGHV
Trigger: AACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTTTGGATACCTCACCTTCTACAGCAGTGTGAAGGCGGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp AAGGTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTTGGCCTCCATTGCTGTTTCATaGTGGCCTATAGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: KVAVSPYMQNMAPMDTLASIAVS*WPIAQP
Trigger: TGGCTGTGCTATAGGCCACAATGAAACAGCAATGGA...GGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS TCA 90 bp AGTGACAAAATCCACACAAGTGAGGCACACCTTCTGTTTGGAAACTaGCAGGTCCGTGGTCACAGAAGGAAAGAGCTCAGAGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SDKIHTSEAHLLFGN*QVRGHRRKELRGSC
Trigger: GCAGGAGCCTCTGAGCTCTTTCCTTCTGTGACCACGGACCTGTCAGTTTCCAAACAGAAGGTGTGCCTCACTTGTGTGGATTTTGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS CCA 90 bp ACACAGGCAGACTCAGAAACAAACAGGTGGGTAGGGATAGGCTCGTaGAAACACCTGCAGAAAGGCAACAGGCAATTGGGCTCAGTCATA +
Preference number: 5 (lower is better)
Translates to: TQADSETNRWVGIGS*KHLQKGNRQLGSVI
Trigger: TATGACTGAGCCCAATTGCCTGTTGCCTTTCTGCAGGTGTTTCCACGAGCCTATCCCTACCCACCTGTTTGTTTCTGAGTCTGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CAA 90 bp CCAAAGGTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTTGGAGCTTCACTCTCCATaGCTGTTTCATTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: PKVAVSPYMQNMAPMDTLELHSP*LFHCGL
Trigger: TAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTC...CAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494034.5
CDS-3UTR CAA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTG +
Preference number: 5 (lower is better)
Translates to: STSLFFLFSPRVILTNSFAPMDT*ATACIL
Trigger: CAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCACCTCCACATGTaGGGCAGGAGGGACCCTAGG +
Preference number: 5 (lower is better)
Translates to: STSLFFLFSPRVILTNSFSHLHM*GRRDPR
Trigger: CCTAGGGTCCCTCCTGCCCAACATGTGGAGGTGGCT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGCCTCACAGCTGCTGTaGAGTCCTTGGCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: STSLFFLFSPRVILTNSFASQLL*SPWLGS
Trigger: ACTCCCCAGCCAAGGACTCAACAGCAGCTGTGAGGC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCGAAGCCCTCACGTTCTaGCCTGTAGCCCACAGCATC +
Preference number: 5 (lower is better)
Translates to: STSLFFLFSPRVILTNSFEALTF*PVAHSI
Trigger: GATGCTGTGGGCTACAGGCAAGAACGTGAGGGCTTC...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595796.5
ENST00000620913.5
CDS-3UTR CAA 90 bp TTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCCAGGAGGAGCTTCACTCTCCATaGCTGTTTCATTGTGGCCTA +
Preference number: 5 (lower is better)
Translates to: LFFLFSPRVILTNSFSQEELHSP*LFHCGL
Trigger: TAGGCCACAATGAAACAGCAATGGAGAGTGAAGCTC...CTCCTGGCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS-3UTR CAA 90 bp ACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAGCGAGACAGCGGTTTGTTaGTGTGTTGATGGTGGGGGA +
Preference number: 5 (lower is better)
Translates to: TSLFFLFSPRVILTNSFSETAVC*CVDGGG
Trigger: TCCCCCACCATCAACACACAAACAAACCGCTGTCTC...GCTGAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS-3UTR CAA 90 bp TCAACATCTTTATTTTTCCTCTTTAGCCCGAGGGTAATCCTGACAAACAGCTTCAAAGGCAACAGGCAATaGGGCTCAGTCATAGACAGG +
Preference number: 5 (lower is better)
Translates to: STSLFFLFSPRVILTNSFKGNRQ*GSVIDR
Trigger: CCTGTCTATGACTGAGCCCAATTGCCTGTTGCCTTT...GAAGCTGTTTGTCAGGATTACCCTCGGGCTAAAGAGGAAAAATAAAGATGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS GCA 72 bp TGGCCCCAATGGACACGTTGGCCACGGCCTGCATCCTaGGCTTGGAGGGCCGGCAGAGCTCCGTATAGATGG +
Preference number: 6 (lower is better)
Translates to: WPQWTRWPRPAS*AWRAGRAPYRW
Trigger: CCATCTATACGGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS GCA 72 bp CAGAACATGGCCCCAATGGACACGTTGGCCACGGCCTaGATCCTGCGCTTGGAGGGCCGGCAGAGCTCCGTA +
Preference number: 6 (lower is better)
Translates to: QNMAPMDTLATA*ILRLEGRQSSV
Trigger: TACGGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 72 bp GCCCATACATGCAGAACATGGCCCCAATGGACACGTTaGCCACGGCCTGCATCCTGCGCTTGGAGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: AHTCRTWPQWTR*PRPASCAWRAG
Trigger: GCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 72 bp ACTGGACCGGCTTGCTCCCAGGAGCAGGACCACGACTaGGCAGGAAGCCCTCACGTTCTTGCCTGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: TGPACSQEQDHD*AGSPHVLACSP
Trigger: TGGGCTACAGGCAAGAACGTGAGGGCTTCCTGCCCAGTCGTGGTCCTGCTCCTGGGAGCAAGCCGGTCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000413668.5
ENST00000416711.5
ENST00000429543.2
ENST00000440085.5
ENST00000441948.5
ENST00000488083.5
ENST00000595796.5
ENST00000620913.5
CDS CAA 72 bp AGCCCATACATGCAGAACATGGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTGCGCTTGGAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SPYMQNMAPMDT*ATACILRLEGR
Trigger: CCGGCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CAA 90 bp GTTGCTGTGAGCCCATACATGCAGAACATGGCCCCAATGGACACGTaGGCCACGGCCTGCATCCTGCGCTTGGAGGGCCGGCAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: VAVSPYMQNMAPMDT*ATACILRLEGRQSS
Trigger: GGAGCTCTGCCGGCCCTCCAAGCGCAGGATGCAGGCCGTGGCCAACGTGTCCATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CCA 72 bp TGCAGTTCCATCCCCAGCGCAGATGAGCCGACCACGTaGAGAAGGGATAGCCTCTCCTCCCAGACCCCAGAC +
Preference number: 6 (lower is better)
Translates to: CSSIPSADEPTT*RRDSLSSQTPD
Trigger: GTCTGGGGTCTGGGAGGAGAGGCTATCCCTTCTCCACGTGGTCGGCTCATCTGCGCTGGGGATGGAACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440085.5
CDS CCA 72 bp ACGGCCAGGCGCACACAGAGGATGAGCGGGTCCTTCTaGCTGTACATGTGCAGCATCTCCGCCTTCACACTG +
Preference number: 6 (lower is better)
Translates to: TARRTQRMSGSF*LYMCSISAFTL
Trigger: CAGTGTGAAGGCGGAGATGCTGCACATGTACAGCCAGAAGGACCCGCTCATCCTCTGTGTGCGCCTGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480105.1
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS GCA 72 bp TCTGGCTGTACATGTGCAGCATCTCCGCCTTCACACTaGCTGGGCCATGAGACAGAGGGTACGGGATGCAGG +
Preference number: 6 (lower is better)
Translates to: SGCTCAASPPSH*LGHETEGTGCR
Trigger: CCTGCATCCCGTACCCTCTGTCTCATGGCCCAGGCAGTGTGAAGGCGGAGATGCTGCACATGTACAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480105.1
ENST00000615300.4
CDS CCA 72 bp AAGGGGGAAACTAGGACAAACTTTGGAGGGAGCAGCTaGAAGTGGAGAGGACCGGGGGAGGGTGAAGCAGCC +
Preference number: 6 (lower is better)
Translates to: KGETRTNFGGSS*KWRGPGEGEAA
Trigger: GGCTGCTTCACCCTCCCCCGGTCCTCTCCACTTCCAGCTGCTCCCTCCAAAGTTTGTCCTAGTTTCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS CCA 72 bp CGAACTGCACGCAAGGAGCAAAGCCCGGGCACACATTaGGACAGGGCACAGGGTAAGGAGACTAATGCCAGG +
Preference number: 6 (lower is better)
Translates to: RTARKEQSPGTH*DRAQGKETNAR
Trigger: CCTGGCATTAGTCTCCTTACCCTGTGCCCTGTCCCAATGTGTGCCCGGGCTTTGCTCCTTGCGTGCAGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619100.4
ENST00000622196.4
CDS CAA 72 bp GATGTCTTCCCCTCGAAATCCATGAACTGGACCGGCTaGCTCCCAGGAGCAGGACCACGACTGGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: DVFPSKSMNWTG*LPGAGPRLGRK
Trigger: CTTCCTGCCCAGTCGTGGTCCTGCTCCTGGGAGCAAGCCGGTCCAGTTCATGGATTTCGAGGGGAAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000413668.5
ENST00000416711.5
ENST00000429543.2
ENST00000440085.5
ENST00000441948.5
ENST00000488083.5
ENST00000595796.5
ENST00000620913.5
CDS CAA 90 bp GGGCCTGATCAGTGTCCAGACATGCGGCTCTGGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGACTGACGGCCATGAAGAGGACTCCC +
Preference number: 6 (lower is better)
Translates to: GPDQCPDMRLWPVAQ*ANIKPRLTAMKRTP
Trigger: GGGAGTCCTCTTCATGGCCGTCAGTCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGGACACTGATCAGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
CDS CCA 72 bp GAGGTGGAGAAGGGGCGCCCCCTATCTGGACCCACTTaGAGGGAGACAGCGGTTTGTTTGTGTGTTGATGGT +
Preference number: 6 (lower is better)
Translates to: EVEKGRPLSGPT*RETAVCLCVDG
Trigger: ACCATCAACACACAAACAAACCGCTGTCTCCCTCCAAGTGGGTCCAGATAGGGGGCGCCCCTTCTCCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS CCA 72 bp CCAGCAGGGCCTGATCAGTGTCCAGACATGCGGCTCTaGCCTGTGGCCCAGTTGGCAAACATAAAGCCTAGA +
Preference number: 6 (lower is better)
Translates to: PAGPDQCPDMRL*PVAQLANIKPR
Trigger: TCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGGACACTGATCAGGCCCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
CDS CAA 90 bp GACCAGACACACCAGCTCAGAGAGATGAAGGGGCAGAGAGAGTGGTaGAGGCAGAGAGACTCCTGGAGGGACAGGAGAAAAGAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: DQTHQLREMKGQREW*RQRDSWRDRRKEAE
Trigger: CTCTGCCTCTTTTCTCCTGTCCCTCCAGGAGTCTCTCTGCCTCAACCACTCTCTCTGCCCCTTCATCTCTCTGAGCTGGTGTGTCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS TCA 72 bp TGTCTGGAGAATGCTCCCTCTATGCCAGCCTCTGTTTaGGTGCTCCCTGTCTTCCTGGACCCTGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: CLENAPSMPASV*VLPVFLDPAGA
Trigger: AGCACCAGCAGGGTCCAGGAAGACAGGGAGCACTCAAACAGAGGCTGGCATAGAGGGAGCATTCTCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS CAA 72 bp AGCCCACAGCATCCGAAGGGAGGGCTCCATTCATCTTaGGATCCTGCAGTTCCATCCGAGTTTCCTGGGGTG +
Preference number: 6 (lower is better)
Translates to: SPQHPKGGLHSS*DPAVPSEFPGV
Trigger: CACCCCAGGAAACTCGGATGGAACTGCAGGATCCAAAGATGAATGGAGCCCTCCCTTCGGATGCTGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416711.5
CDS CAA 72 bp AGCCCACAGCATCCGAAGGGAGGGCTCCATTCATCTTaGGATCCTGCAGTTCCATCCTGCTCCTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPQHPKGGLHSS*DPAVPSCSSQL
Trigger: GAGCTGAGAGGAGCAGGATGGAACTGCAGGATCCAAAGATGAATGGAGCCCTCCCTTCGGATGCTGTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429543.2
ENST00000488083.5
ENST00000595796.5
ENST00000620913.5
CDS CAA 72 bp CAGTGTCCAGACATGCGGCTCTGGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGACTGACGGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: QCPDMRLWPVAQ*ANIKPRLTAMK
Trigger: CTTCATGGCCGTCAGTCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCCAGAGCCGCATGTCTGGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
CDS CAA 72 bp AGCCCACAGCATCCGAAGGGAGGGCTCCATTCATCTTaGGATCCTGCAGTTCCATCGCTGTCTCTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SPQHPKGGLHSS*DPAVPSLSLLP
Trigger: TGGCAAGAGAGACAGCGATGGAACTGCAGGATCCAAAGATGAATGGAGCCCTCCCTTCGGATGCTGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413668.5
CDS CAA 72 bp TCAGTGTCCAGACATGCGGCTCTGCCTGTGGCCCAGTaGGCAAACATAAAGCCTAGACTGACGGCCATGAAG +
Preference number: 6 (lower is better)
Translates to: SVSRHAALPVAQ*ANIKPRLTAMK
Trigger: CTTCATGGCCGTCAGTCTAGGCTTTATGTTTGCCAACTGGGCCACAGGCAGAGCCGCATGTCTGGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622196.4
CDS GCA 72 bp GTGCTCTTTCCATCTGTCTGGAGAATGCTCCCTCTATaGCAGCCTCTGTTTGAGTGCTCCCTGTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: VLFPSVWRMLPL*QPLFECSLSSW
Trigger: CCAGGAAGACAGGGAGCACTCAAACAGAGGCTGGCATAGAGGGAGCATTCTCCAGACAGATGGAAAGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS TCA 72 bp ACCCACTTGGAGGGAGACAGCGGTTTGTTTGTGTGTTaGTGGTGGGGGAAATGGCCTGAAAGATTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: THLEGDSGLFVC*WWGKWPERLRV
Trigger: CACCCTCAATCTTTCAGGCCATTTCCCCCACCATCAACACACAAACAAACCGCTGTCTCCCTCCAAGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS CCA 72 bp GACTCAGAAACAAACAGGTGGGTAGGGATAGGCTCGTaGAAACACCTGCAGAAAGGCAACAGGCAATTGGGC +
Preference number: 6 (lower is better)
Translates to: DSETNRWVGIGS*KHLQKGNRQLG
Trigger: GCCCAATTGCCTGTTGCCTTTCTGCAGGTGTTTCCACGAGCCTATCCCTACCCACCTGTTTGTTTCTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS TCA 72 bp TTGTGTGTTGATGGTGGGGGAAATGGCCTGAAAGATTaGGGGTGTAGACCCACAGCTAGAGAGAGTGACAGG +
Preference number: 6 (lower is better)
Translates to: LCVDGGGNGLKD*GCRPTARESDR
Trigger: CCTGTCACTCTCTCTAGCTGTGGGTCTACACCCTCAATCTTTCAGGCCATTTCCCCCACCATCAACACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS CCA 72 bp GAAAGGGACACACAGGCAGACTCAGAAACAAACAGGTaGGTAGGGATAGGCTCGTGGAAACACCTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ERDTQADSETNR*VGIGSWKHLQK
Trigger: TTTCTGCAGGTGTTTCCACGAGCCTATCCCTACCCACCTGTTTGTTTCTGAGTCTGCCTGTGTGTCCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS CAA 72 bp CTATCTGGACCCACTTGGAGGGAGACAGCGGTTTGTTaGTGTGTTGATGGTGGGGGAAATGGCCTGAAAGAT +
Preference number: 6 (lower is better)
Translates to: LSGPTWRETAVC*CVDGGGNGLKD
Trigger: ATCTTTCAGGCCATTTCCCCCACCATCAACACACAAACAAACCGCTGTCTCCCTCCAAGTGGGTCCAGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS TCA 72 bp ATCCACACAAGTGAGGCACACCTTCTGTTTGGAAACTaGCAGGTCCGTGGTCACAGAAGGAAAGAGCTCAGA +
Preference number: 6 (lower is better)
Translates to: IHTSEAHLLFGN*QVRGHRRKELR
Trigger: TCTGAGCTCTTTCCTTCTGTGACCACGGACCTGTCAGTTTCCAAACAGAAGGTGTGCCTCACTTGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS TCA 72 bp CGGTTTGTTTGTGTGTTGATGGTGGGGGAAATGGCCTaGAAGATTGAGGGTGTAGACCCACAGCTAGAGAGA +
Preference number: 6 (lower is better)
Translates to: RFVCVLMVGEMA*KIEGVDPQLER
Trigger: TCTCTCTAGCTGTGGGTCTACACCCTCAATCTTTCAGGCCATTTCCCCCACCATCAACACACAAACAAACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595796.5
CDS GCA 72 bp CTTCACACTGCTGTAGAAGGTGAGGTATCCAAAGGTTaGTGTGAGCCCATACATGCAGAACATGGCCCCAAT +
Preference number: 6 (lower is better)
Translates to: LHTAVEGEVSKG*CEPIHAEHGPN
Trigger: ATTGGGGCCATGTTCTGCATGTATGGGCTCACAGCAACCTTTGGATACCTCACCTTCTACAGCAGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000595796.5
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4
CDS CAA 90 bp ACATGCACAGTGACAAAATCCACACAAGTGAGGCACACCTTCTGTTaGGAAACTGACAGGTCCGTGGTCACAGAAGGAAAGAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: TCTVTKSTQVRHTFC*ETDRSVVTEGKSSE
Trigger: CTCTGAGCTCTTTCCTTCTGTGACCACGGACCTGTCAGTTTCCAAACAGAAGGTGTGCCTCACTTGTGTGGATTTTGTCACTGTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS CAA 72 bp GTGACAAAATCCACACAAGTGAGGCACACCTTCTGTTaGGAAACTGACAGGTCCGTGGTCACAGAAGGAAAG +
Preference number: 6 (lower is better)
Translates to: VTKSTQVRHTFC*ETDRSVVTEGK
Trigger: CTTTCCTTCTGTGACCACGGACCTGTCAGTTTCCAAACAGAAGGTGTGCCTCACTTGTGTGGATTTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480105.1
CDS CAA 72 bp ATATCCCGGATGGTTGGCACACAGATGACAAGGACATaGACCAAAACAAGCAGGATCAGAGCTATGGCCACA +
Preference number: 6 (lower is better)
Translates to: ISRMVGTQMTRT*TKTSRIRAMAT
Trigger: TGTGGCCATAGCTCTGATCCTGCTTGTTTTGGTCAATGTCCTTGTCATCTGTGTGCCAACCATCCGGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480105.1
ENST00000595796.5
ENST00000615300.4
ENST00000619100.4
ENST00000620913.5
ENST00000622196.4