RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC38A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134294

Ensembl transcript IDs: ENST00000256689.10, ENST00000546520.1, ENST00000547252.5, ENST00000548111.5, ENST00000549258.5, ENST00000551374.5, ENST00000551405.1, ENST00000553252.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATaGTTCCGGTCATCACCAGTACACCACTTAACAGGAAGAACAAAG +
Preference number: 1 (lower is better)
Translates to: HLQVHCVPNPKQSRP*FRSSPVHHLTGRTK
Trigger: CTTTGTTCTTCCTGTTAAGTGGTGTACTGGTGATGACCGGAAGCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 90 bp ACTGAGTTTGAGTTTGAGTGGTGCCAATTAATGGCCACCTCCAGGTaGATTGTGTACCCAATCCAAAACAATCAAGGCCATGCTTCCGGT +
Preference number: 1 (lower is better)
Translates to: TEFEFEWCQLMATSR*IVYPIQNNQGHASG
Trigger: ACCGGAAGCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTCAAACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 90 bp TTACTCAACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTGGTaGCAATTAATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAA +
Preference number: 1 (lower is better)
Translates to: LLNTGIRWTEFEFEW*QLMATSRCIVYPIQ
Trigger: TTGGATTGGGTACACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTTGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR CCA 90 bp AGTTTACTCAACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTaGTGCCAATTAATGGCCACCTCCAGGTGCATTGTGTACCCAATC +
Preference number: 1 (lower is better)
Translates to: SLLNTGIRWTEFEFE*CQLMATSRCIVYPI
Trigger: GATTGGGTACACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTTGAGTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 90 bp TGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCTCATaGAAATTTGCCAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGC +
Preference number: 1 (lower is better)
Translates to: WQVLDTKSATLSRSS*KFANSWSQLEVRFC
Trigger: GCAGAACCTCACCTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR CCA 90 bp AGCCAAGCATGTGGCTTGATAAAAGTTAAGAGTTTGTCCATTCTCTaGAATGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGG +
Preference number: 1 (lower is better)
Translates to: SQACGLIKVKSLSIL*NGIKLSLPLTRDSW
Trigger: CCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCATTCCAGAGAATGGACAAACTCTTAACTTTTATCAAGCCACATGCTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR TCA 90 bp GATAGACACTGTAATGAGACTATGACGCCACCAACTGAAATCTTTTaGTGCACACAACAAGTGAGTTACAGAACTCCGGATTGGGAAAAT +
Preference number: 1 (lower is better)
Translates to: DRHCNETMTPPTEIF*CTQQVSYRTPDWEN
Trigger: ATTTTCCCAATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGTGTCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR TCA 90 bp GCCCCAAACAACATTTTTAGTTCAAGGGCAAACCTTACAGCCAGATaGCCAATTGACAATTCCATTATTTGCTTCCTTCAACCACTTAAT +
Preference number: 1 (lower is better)
Translates to: APNNIFSSRANLTAR*PIDNSIICFLQPLN
Trigger: ATTAAGTGGTTGAAGGAAGCAAATAATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTTTGCCCTTGAACTAAAAATGTTGTTTGGGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 90 bp AAAGTCAGCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTaGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCT +
Preference number: 2 (lower is better)
Translates to: KVSNSFQELMQICQF*VSTRGEVLHSNGVP
Trigger: AGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGCTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGATGTCTCCACATTTCTaGCCCTTGCCCCAAACAACA +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWMSPHF*PLPQTT
Trigger: TGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACAT...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSTFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGATAAAGCTTACTGCATaGGAAACCCAGTGGCCTACG +
Preference number: 2 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLIKLTA*ETQWPT
Trigger: CGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTAT...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACGCAGTTGGACCAAAATaGCTACTAACACTCAGTTTG +
Preference number: 2 (lower is better)
Translates to: VSTFLALAPNNIFSSRANAVGPK*LLTLSL
Trigger: CAAACTGAGTGTTAGTAGTCATTTTGGTCCAACTGC...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGACAGGACACGGAACCTaGAATTTCTTGCAAATGACC +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWTGHGT*NFLQMT
Trigger: GGTCATTTGCAAGAAATTTCAGGTTCCGTGTCCTGT...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGTTCAGTCACGTTATGTaGCAAAGCAGGTACAAGAGC +
Preference number: 2 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRFSHVM*QSRYKS
Trigger: GCTCTTGTACCTGCTTTGTCACATAACGTGACTGAA...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACGGAAGAACAGCAGGATaGCAGACAAATGAAAAGATC +
Preference number: 2 (lower is better)
Translates to: VSTFLALAPNNIFSSRANGRTAG*QTNEKI
Trigger: GATCTTTTCATTTGTCTGTCATCCTGCTGTTCTTCC...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR CCA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSLSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp AACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTGGTGCCAATTAATGGCCACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: NTGIRWTEFEFEWCQLMATFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...GGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGTGTACAAGAATGAGATaGCAGTCCAGTGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRCTRMR*QSSANE
Trigger: CTCATTTGCACTGGACTGTCATCTCATTCTTGTACA...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGTGTACAAGAATGAGATaGCAGTCCAGTGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: ATLSRSSCKFANSWSQLECTRMR*QSSANE
Trigger: CTCATTTGCACTGGACTGTCATCTCATTCTTGTACA...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGTTGAAATGGAAGGGTTaGCATGCAGTTGGACCAAAA +
Preference number: 2 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRLKWKG*HAVGPK
Trigger: TTTTGGTCCAACTGCATGTCAACCCTTCCATTTCAA...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAAGGAATATATACACTTaGACCCAAGACCCAAACCTG +
Preference number: 2 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKRNIYT*TQDPNL
Trigger: CAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCCATACATTGTTTCATTaGAACGGTGTAGCACTCTTT +
Preference number: 2 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSHTLFH*NGVALF
Trigger: AAAGAGTGCTACACCGTTTCAATGAAACAATGTATG...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
3UTR-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTATGAAGAGGTAGCTTaGCATAGCTCCAATGTTCTG +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWYEEVA*HSSNVL
Trigger: CAGAACATTGGAGCTATGTCAAGCTACCTCTTCATA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAACAGCCAGACGGACAATaGGAAGAAGAATATCAGTTC +
Preference number: 2 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEQPDGQ*EEEYQF
Trigger: GAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTG...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR CCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCATACAGAACTCCGGATTaGGAAAATAACTACTGGTAC +
Preference number: 2 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPYRTPD*ENNYWY
Trigger: GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTA...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTATAAAGCTTACTGCATaGGAAACCCAGTGGCCTACG +
Preference number: 2 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGIKLTA*ETQWPT
Trigger: CGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTAT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGATTTCTAACTGGGATTaGAATGGAAGGGTTGACATG +
Preference number: 2 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRISNWD*NGRVDM
Trigger: CATGTCAACCCTTCCATTTCAATCCCAGTTAGAAAT...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGAACCTTACAGCCAGATaGCCAATTGACAATTCCATT +
Preference number: 2 (lower is better)
Translates to: ATLSRSSCKFANSWSQLENLTAR*PIDNSI
Trigger: AATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTT...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAGAATGACCACCAATaGCACCAACAGAACCAAATA +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWKNDHQ*HQQNQI
Trigger: TATTTGGTTCTGTTGGTGTCATTGGTGGTCATTCTT...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGGCGACAAAGGAAGAATaGCCACCAATGACACCAACA +
Preference number: 2 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILATKEE*PPMTPT
Trigger: TGTTGGTGTCATTGGTGGTCATTCTTCCTTTGTCGC...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGACTGTAATGAGACTATaGCGCCACCAACTGAAATCT +
Preference number: 2 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLTVMRL*RHQLKS
Trigger: AGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGT...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 2 (lower is better)
Translates to: ATLSRSSCKFANSWSQLEKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR GCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: ATLSRSSCKFANSWSQLEFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR GCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGGAGCTCATGCAAATTTaGCAATTCTTGGTCTCAACT +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWELMQI*QFLVST
Trigger: AGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTC...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLENTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAATGTTCGTTAATGCCTaGATCACCAAAGGCAACTCA +
Preference number: 2 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEMFVNA*ITKGNS
Trigger: TGAGTTGCCTTTGGTGATCCAGGCATTAACGAACAT...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 2 (lower is better)
Translates to: VTSLNPRLVVLLFISISNKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 2 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAACCTGTTTTACCCAATTaGACTATTTGGTACCTCAAA +
Preference number: 2 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKPVLPN*TIWYLK
Trigger: TTTGAGGTACCAAATAGTGCAATTGGGTAAAACAGG...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR GCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCCTGTTTTACCCAATTaGACTATTTGGTACCTCAAA +
Preference number: 2 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWPVLPN*TIWYLK
Trigger: TTTGAGGTACCAAATAGTGCAATTGGGTAAAACAGG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACATAATTTTGGCCTATTaGCATCAAATGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: VSTFLALAPNNIFSSRANIILAY*HQMPIF
Trigger: GAAAATGGGCATTTGATGGCAATAGGCCAAAATTAT...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLLSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 90 bp TTGAAACGGTGTAGCACTCTTTGCCAACAAGCCATACTAGAATTGTaGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAA +
Preference number: 2 (lower is better)
Translates to: LKRCSTLCQQAILEL*ASNSTVGIFTLYTQ
Trigger: TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAGTATGGCTTGTTGGCAAAGAGTGCTACACCGTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
3UTR CAA 90 bp TCATTGAAACGGTGTAGCACTCTTTGCCAACAAGCCATACTAGAATaGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACA +
Preference number: 2 (lower is better)
Translates to: SLKRCSTLCQQAILE*LASNSTVGIFTLYT
Trigger: TGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAGTATGGCTTGTTGGCAAAGAGTGCTACACCGTTTCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
3UTR-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 2 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAGTTCTGCATTGTAATTaGTCCAGATGCTGCAAGCTT +
Preference number: 2 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIVLHCN*SRCCKL
Trigger: AAGCTTGCAGCATCTGGATCAATTACAATGCAGAAC...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR TCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGGGTATGAAGCAATTCTaGCTCAACATGTTCGTAAAA +
Preference number: 2 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLGMKQF*LNMFVK
Trigger: TTTTACGAACATGTTGAGTCAGAATTGCTTCATACC...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAAACCAGCGAGGAATCTaGACTTCAAAAGGAAGTGAA +
Preference number: 2 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFINQRGI*TSKGSE
Trigger: TTCACTTCCTTTTGAAGTGCAGATTCCTCGCTGGTT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTATGGAAGGGTTGACATaGAGTTGGACCAAAATGACT +
Preference number: 2 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGMEGLT*SWTKMT
Trigger: AGTCATTTTGGTCCAACTGCATGTCAACCCTTCCAT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGNTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCCAACTGAAATCTTTTaGTGCACACAACAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGPTEIF*CTQQVS
Trigger: ACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGAACCAGCGAGGAATCTaGACTTCAAAAGGAAGTGAA +
Preference number: 2 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMNQRGI*TSKGSE
Trigger: TTCACTTCCTTTTGAAGTGCAGATTCCTCGCTGGTT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGGTATTTGGCTTATTATaGCTACAAAAAGGCAAACCA +
Preference number: 2 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLVFGLL*LQKGKP
Trigger: TGGTTTGCCTTTTTGTAGGCATAATAAGCCAAATAC...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR GCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTCGGTGTAGCACTCTTTaGCAACAAGCCATACTAGAA +
Preference number: 2 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIRCSTL*QQAILE
Trigger: TTCTAGTATGGCTTGTTGGCAAAGAGTGCTACACCG...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
3UTR-3UTR CCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATTTAACCCGAGACTCGTaGTTTTGTTGTTCATATCCA +
Preference number: 2 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYLTRDS*FCCSYP
Trigger: TGGATATGAACAACAAAACCACGAGTCTCGGGTTAA...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 2 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMTFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTTATGACGCCACCAACTaGAATCTTTTGATGCACACA +
Preference number: 2 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIYDATN*NLLMHT
Trigger: TGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATA...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATCCTGTTTTACCCAATTaGACTATTTGGTACCTCAAA +
Preference number: 2 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYPVLPN*TIWYLK
Trigger: TTTGAGGTACCAAATAGTGCAATTGGGTAAAACAGG...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAATCATTCTTCTACGGCTaGGGTCTTTCAGTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQSFFYG*GLSVLH
Trigger: ATGAAGAACTGAAAGACCGCAGCCGTAGAAGAATGA...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR CCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 2 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDINTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTGGGTTGACATGCAGTTaGACCAAAATGACTACTAAC +
Preference number: 2 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIGLTCS*TKMTTN
Trigger: GTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCC...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGGGGTTGACATGCAGTTaGACCAAAATGACTACTAAC +
Preference number: 2 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKGLTCS*TKMTTN
Trigger: GTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCC...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAACTTTCTTCACCAACTTaGTATAGAAGGCAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQLSSPT*YRRQKE
Trigger: TTCCTTCTGCCTTCTATATCAAGTTGGTGAAGAAAG...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATGTATTTGGCTTATTATaGCTACAAAAAGGCAAACCA +
Preference number: 2 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYVFGLL*LQKGKP
Trigger: TGGTTTGCCTTTTTGTAGGCATAATAAGCCAAATAC...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR GCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACTTAACCCGAGACTCGTaGTTTTGTTGTTCATATCCA +
Preference number: 2 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNLTRDS*FCCSYP
Trigger: TGGATATGAACAACAAAACCACGAGTCTCGGGTTAA...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKLSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 90 bp ACAACATTTTTAGTTCAAGGGCAAACCTTACAGCCAGATGACCAATaGACAATTCCATTATTTGCTTCCTTCAACCACTTAATGGAATTA +
Preference number: 2 (lower is better)
Translates to: TTFLVQGQTLQPDDQ*TIPLFASFNHLMEL
Trigger: TAATTCCATTAAGTGGTTGAAGGAAGCAAATAATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTTTGCCCTTGAACTAAAAATGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATAATTTTGGCCTATTaGCATCAAATGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMIILAY*HQMPIF
Trigger: GAAAATGGGCATTTGATGGCAATAGGCCAAAATTAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATAGCTCCAATGTTCTaGATTGTAATTGATCCAGAT +
Preference number: 2 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMIAPMF*IVIDPD
Trigger: ATCTGGATCAATTACAATGCAGAACATTGGAGCTAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR GCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACATAATTTTGGCCTATTaGCATCAAATGCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNIILAY*HQMPIF
Trigger: GAAAATGGGCATTTGATGGCAATAGGCCAAAATTAT...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR GCA 72 bp ACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTGGTaGCAATTAATGGCCACCTCCAGGTGCATTGTGTAC +
Preference number: 3 (lower is better)
Translates to: TGIRWTEFEFEW*QLMATSRCIVY
Trigger: GTACACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR CCA 72 bp AACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTaGTGCCAATTAATGGCCACCTCCAGGTGCATTGTG +
Preference number: 3 (lower is better)
Translates to: NTGIRWTEFEFE*CQLMATSRCIV
Trigger: CACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 72 bp GTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATaGTTCCGGTCATCACCAGTACACCACTTAACAGGA +
Preference number: 3 (lower is better)
Translates to: VHCVPNPKQSRP*FRSSPVHHLTG
Trigger: TCCTGTTAAGTGGTGTACTGGTGATGACCGGAAGCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 72 bp GAGTTTGAGTGGTGCCAATTAATGGCCACCTCCAGGTaGATTGTGTACCCAATCCAAAACAATCAAGGCCAT +
Preference number: 3 (lower is better)
Translates to: EFEWCQLMATSR*IVYPIQNNQGH
Trigger: ATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATTAATTGGCACCACTCAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR CAA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCCCGAGACTCGTGGTTTaGTTGTTCATATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSPRLVV*LFISIS
Trigger: AGAAATGGATATGAACAACAAAACCACGAGTCTCGG...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 3 (lower is better)
Translates to: VSTFLALAPNNIFSSRANPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCCTGGACACAATAATTTaGGCCTATTGCCATCAAATG +
Preference number: 3 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSLDTII*AYCHQM
Trigger: CATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACAAATTTGCCAATTCTaGGTCTCAACTAGAGGTGAG +
Preference number: 3 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPQICQF*VSTRGE
Trigger: CTCACCTCTAGTTGAGACCAAGAATTGGCAAATTTG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACAGGAATATATACACTaGAACCCAAGACCCAAACCT +
Preference number: 3 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPQEYIH*NPRPKP
Trigger: AGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 3 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCAGGTACAAGAGCTGTaGGCTGTGTTAAGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILQVQEL*AVLRWC
Trigger: ACACCACCTTAACACAGCCAACAGCTCTTGTACCTG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 72 bp GACAGTCCAGTGCAAATGAGTTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCCTACGCAAAGAGAACT +
Preference number: 3 (lower is better)
Translates to: DSPVQMSFYKAY*MRNPVAYAKRT
Trigger: AGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAAACTCATTTGCACTGGACTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGAGCCAAGCATGTGGCTaGATAAAAGTTAAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: ATLSRSSCKFANSWSQLESQACG*IKVKSL
Trigger: CAAACTCTTAACTTTTATCAAGCCACATGCTTGGCT...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCAATTAATGGGAATTCATaGTTCAGGAACCTCAAGGTA +
Preference number: 3 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPINGNS*FRNLKV
Trigger: TACCTTGAGGTTCCTGAACAATGAATTCCCATTAAT...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR TCA 72 bp CGCCACCAACTGAAATCTTTTGATGCACACAACAAGTaGGTTACAGAACTCCGGATTGGGAAAATAACTACT +
Preference number: 3 (lower is better)
Translates to: RHQLKSFDAHNK*VTELRIGKITT
Trigger: AGTAGTTATTTTCCCAATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGGTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR TCA 72 bp TGTAATGAGACTATGACGCCACCAACTGAAATCTTTTaGTGCACACAACAAGTGAGTTACAGAACTCCGGAT +
Preference number: 3 (lower is better)
Translates to: CNETMTPPTEIF*CTQQVSYRTPD
Trigger: ATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATAGTCTCATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 72 bp AAAGTGTACTCTCTGGACACAATAATTTTGGCCTATTaGCATCAAATGCCCATTTTCCACTGCTGGAAGCAA +
Preference number: 3 (lower is better)
Translates to: KVYSLDTIILAY*HQMPIFHCWKQ
Trigger: TTGCTTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAGTACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR GCA 72 bp TTAGATACAAAGTCAGCAACTCTTTCCAGGAGCTCATaGAAATTTGCCAATTCTTGGTCTCAACTAGAGGTG +
Preference number: 3 (lower is better)
Translates to: LDTKSATLSRSS*KFANSWSQLEV
Trigger: CACCTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGCTGACTTTGTATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCCACATTTCTGGCCCTaGCCCCAAACAACATTTTTA +
Preference number: 3 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGPHFWP*PQTTFL
Trigger: TAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCAAAGCCCCAATCTTTaGTACAGATTTCATAGGTTC +
Preference number: 3 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLQSPNL*YRFHRF
Trigger: GAACCTATGAAATCTGTACAAAAGATTGGGGCTTTG...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR-3UTR CAA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCCGAGACTCGTGGTTTaGTTGTTCATATCCATTTCT +
Preference number: 3 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILPRLVV*LFISIS
Trigger: AGAAATGGATATGAACAACAAAACCACGAGTCTCGG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCAAATTTGCCAATTCTaGGTCTCAACTAGAGGTGAG +
Preference number: 3 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILQICQF*VSTRGE
Trigger: CTCACCTCTAGTTGAGACCAAGAATTGGCAAATTTG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTAGCCAAGCATGTGGCTaGATAAAAGTTAAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGSQACG*IKVKSL
Trigger: CAAACTCTTAACTTTTATCAAGCCACATGCTTGGCT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACGCCATACTAGAATTGTaGGCCTCTAACAGTACAGTG +
Preference number: 3 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNAILEL*ASNSTV
Trigger: CACTGTACTGTTAGAGGCCAACAATTCTAGTATGGC...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
3UTR-3UTR CAA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATGAAAAGATCAGAATaGGCACAGCATAGACAGTCT +
Preference number: 3 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYMKRSE*AQHRQS
Trigger: AGACTGTCTATGCTGTGCCAATTCTGATCTTTTCAT...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR GCA 72 bp TCATTTCTAACTGGGATTGAAATGGAAGGGTTGACATaGAGTTGGACCAAAATGACTACTAACACTCAGTTT +
Preference number: 3 (lower is better)
Translates to: SFLTGIEMEGLT*SWTKMTTNTQF
Trigger: AAACTGAGTGTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCCTTCCATTTCAATCCCAGTTAGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGCCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 3 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCAACTAAGCCATACATaGTCAAGTAATTCACACTTC +
Preference number: 3 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGQLSHT*SSNSHF
Trigger: GAAGTGTGAATTACTTGACAATGTATGGCTTAGTTG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATCAACTAAGCCATACATaGTCAAGTAATTCACACTTC +
Preference number: 3 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYQLSHT*SSNSHF
Trigger: GAAGTGTGAATTACTTGACAATGTATGGCTTAGTTG...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR-3UTR CAA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR TCA 72 bp AACATTTTTAGTTCAAGGGCAAACCTTACAGCCAGATaGCCAATTGACAATTCCATTATTTGCTTCCTTCAA +
Preference number: 3 (lower is better)
Translates to: NIFSSRANLTAR*PIDNSIICFLQ
Trigger: TTGAAGGAAGCAAATAATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTTTGCCCTTGAACTAAAAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCGGAAAGGCGCGAGCGTaGGGTAACGCGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCGKARA*GNAWSG
Trigger: GCCCGACCACGCGTTACCGCACGCTCGCGCCTTTCC...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGGTCCTTGGCGGTGGGTaGAGCGGCCCGCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLVLGGG*SGPRVG
Trigger: GCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGAC...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAGGAAAGGCGCGAGCGTaGGGTAACGCGTGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKGKARA*GNAWSG
Trigger: GCCCGACCACGCGTTACCGCACGCTCGCGCCTTTCC...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANGSFCP*RWVQRP
Trigger: GGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCC...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGGTCCTTGGCGGTGGGTaGAGCGGCCCGCGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMVLGGG*SGPRVG
Trigger: GCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGAC...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCGAGTCGGCCTCGGTaGTCTCTATTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRASRPR*SLFSRR
Trigger: TCTGCGTGAGAATAGAGACCACCGAGGCCGACTCGC...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIGSFCP*RWVQRP
Trigger: GGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCC...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp AACACAGCCAGACGGACAATGAGAAGAAGAATATCAGTTCCCAAGATAGAAGAGGCGAGTCGGCCTCGGTaGTCTCTATTCTCACGCAGA +
Preference number: 4 (lower is better)
Translates to: NTARRTMRRRISVPKIEEASRPR*SLFSRR
Trigger: TCTGCGTGAGAATAGAGACCACCGAGGCCGACTCGC...CTCTTCTATCTTGGGAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCGCGACAAAGGAAGAATaGCCACCAATGACACCAACA +
Preference number: 4 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSATKEE*PPMTPT
Trigger: TGTTGGTGTCATTGGTGGTCATTCTTCCTTTGTCGC...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCAATGGCCACCTCCAGGTaGATTGTGTACCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPMATSR*IVYPIQ
Trigger: TTGGATTGGGTACACAATGCACCTGGAGGTGGCCAT...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGT +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNFCPWR*VQRPAS
Trigger: ACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAA...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCTATGAAGAGGTAGCTTaGCATAGCTCCAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCYEEVA*HSSNVL
Trigger: CAGAACATTGGAGCTATGTCAAGCTACCTCTTCATA...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAATGGCCACCTCCAGGTaGATTGTGTACCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKMATSR*IVYPIQ
Trigger: TTGGATTGGGTACACAATGCACCTGGAGGTGGCCAT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACTAGAGGTGAGGTTCTaGATTCGAATGGAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPLEVRF*IRMECL
Trigger: TAGGCACTCCATTCGAATGCAGAACCTCACCTCTAG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGGCGACAAAGGAAGAATaGCCACCAATGACACCAACA +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWATKEE*PPMTPT
Trigger: TGTTGGTGTCATTGGTGGTCATTCTTCCTTTGTCGC...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACAGCCAGACGGACAATaGGAAGAAGAATATCAGTTC +
Preference number: 4 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPQPDGQ*EEEYQF
Trigger: GAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACGATGCACACAACAAGTaGGTTACAGAACTCCGGATT +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANDAHNK*VTELRI
Trigger: AATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATC...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CGGATTGGGAAAATAACTACTGGTACTGTCAGGGTCACAGCCATTAACACAGCCTATGACGCCACCAACTaGAATCTTTTGATGCACACA +
Preference number: 4 (lower is better)
Translates to: RIGKITTGTVRVTAINTAYDATN*NLLMHT
Trigger: TGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATA...GGCTGTGTTAATGGCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCCTTTCTTCACCAACTTaGTATAGAAGGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCLSSPT*YRRQKE
Trigger: TTCCTTCTGCCTTCTATATCAAGTTGGTGAAGAAAG...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCATTTCTAACTGGGATTaGAATGGAAGGGTTGACATG +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCISNWD*NGRVDM
Trigger: CATGTCAACCCTTCCATTTCAATCCCAGTTAGAAAT...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CGGATTGGGAAAATAACTACTGGTACTGTCAGGGTCACAGCCATTAACACAGCCTCATTCTTCTACGGCTaGGGTCTTTCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RIGKITTGTVRVTAINTASFFYG*GLSVLH
Trigger: ATGAAGAACTGAAAGACCGCAGCCGTAGAAGAATGA...GGCTGTGTTAATGGCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGATGGCCACCTCCAGGTaGATTGTGTACCCAATCCAA +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLMATSR*IVYPIQ
Trigger: TTGGATTGGGTACACAATGCACCTGGAGGTGGCCAT...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp AACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTGGTGCCAATTAATGGCCTTTGAGTTTGAGTGGTaGCAATTAATGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NTGIRWTEFEFEWCQLMAFEFEW*QLMATS
Trigger: GGAGGTGGCCATTAATTGGCACCACTCAAACTCAAA...GGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CGGATTGGGAAAATAACTACTGGTACTGTCAGGGTCACAGCCATTAACACAGCCATGGAAGGGTTGACATaGAGTTGGACCAAAATGACT +
Preference number: 4 (lower is better)
Translates to: RIGKITTGTVRVTAINTAMEGLT*SWTKMT
Trigger: AGTCATTTTGGTCCAACTGCATGTCAACCCTTCCAT...GGCTGTGTTAATGGCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CCA 90 bp AACACTGGCATCAGATGGACTGAGTTTGAGTTTGAGTGGTGCCAATTAATGGCCGAGTTTGAGTTTGAGTaGTGCCAATTAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: NTGIRWTEFEFEWCQLMAEFEFE*CQLMAT
Trigger: GGTGGCCATTAATTGGCACCACTCAAACTCAAACTC...GGCCATTAATTGGCACCACTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCTTAACCCGAGACTCGTaGTTTTGTTGTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCLTRDS*FCCSYP
Trigger: TGGATATGAACAACAAAACCACGAGTCTCGGGTTAA...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGGCGACAAAGGAAGAATaGCCACCAATGACACCAACA +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLATKEE*PPMTPT
Trigger: TGTTGGTGTCATTGGTGGTCATTCTTCCTTTGTCGC...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAACAGGACACGGAACCTaGAATTTCTTGCAAATGACC +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKTGHGT*NFLQMT
Trigger: GGTCATTTGCAAGAAATTTCAGGTTCCGTGTCCTGT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCGGTATGAAGCAATTCTaGCTCAACATGTTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCGMKQF*LNMFVK
Trigger: TTTTACGAACATGTTGAGTCAGAATTGCTTCATACC...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGGATGCACACAACAAGTaGGTTACAGAACTCCGGATT +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWDAHNK*VTELRI
Trigger: AATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATC...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACATAAAGCTTACTGCATaGGAAACCCAGTGGCCTACG +
Preference number: 4 (lower is better)
Translates to: VTSLNPRLVVLLFISISNIKLTA*ETQWPT
Trigger: CGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTAT...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGATAAAGCTTACTGCATaGGAAACCCAGTGGCCTACG +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLIKLTA*ETQWPT
Trigger: CGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTAT...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACATTACAGTTGTAACTaGAACATCCACGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPHYSCN*NIHGRQ
Trigger: CTGTCTTCCGTGGATGTTTCAGTTACAACTGTAATG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGTGTTGGAACTGTAGCTaGTGCTGTCTTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILCWNCS*CCLHPG
Trigger: CCCCGGATGAAGACAGCAGCAGCTACAGTTCCAACA...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCAATCAACATAGAAGCTaGAGATGCACCAATAAAACC +
Preference number: 4 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCNQHRS*RCTNKT
Trigger: GGTTTTATTGGTGCATCTGCAGCTTCTATGTTGATT...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCGAGCTCATGCAAATTTaGCAATTCTTGGTCTCAACT +
Preference number: 4 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSELMQI*QFLVST
Trigger: AGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTC...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCTTCATGCTAAGCACTaGGAGGAATCGGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILLHAKH*EESGAA
Trigger: AGCTGCACCCGATTCCTCCCAGTGCTTAGCATGAAG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANNTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp CGGATTGGGAAAATAACTACTGGTACTGTCAGGGTCACAGCCATTAACACAGCCCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: RIGKITTGTVRVTAINTALSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...GGCTGTGTTAATGGCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCAATCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
3UTR CAA 72 bp CGGTGTAGCACTCTTTGCCAACAAGCCATACTAGAATaGTTGGCCTCTAACAGTACAGTGGGGATATTTACA +
Preference number: 4 (lower is better)
Translates to: RCSTLCQQAILE*LASNSTVGIFT
Trigger: TGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAGTATGGCTTGTTGGCAAAGAGTGCTACACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTTGGGGTAGGAGTAGTTaGAGTCGCTGTTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGWGRSS*SRCWNC
Trigger: ACAGTTCCAACAGCGACTTCAACTACTCCTACCCCA...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTTCAGTCACGTTATGTaGCAAAGCAGGTACAAGAGC +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLFSHVM*QSRYKS
Trigger: GCTCTTGTACCTGCTTTGTCACATAACGTGACTGAA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGCAGCCAGACGGACAATaGGAAGAAGAATATCAGTTC +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLQPDGQ*EEEYQF
Trigger: GAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTG...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTTGAAATGGAAGGGTTaGCATGCAGTTGGACCAAAA +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWLKWKG*HAVGPK
Trigger: TTTTGGTCCAACTGCATGTCAACCCTTCCATTTCAA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp CTAGAATTGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAATGTTGGAACTGTAGCTaGTGCTGTCTTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: LELLASNSTVGIFTLYTQCWNCS*CCLHPG
Trigger: CCCCGGATGAAGACAGCAGCAGCTACAGTTCCAACA...TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR GCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGTCATTCTTCTACGGCTaGGGTCTTTCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRSFFYG*GLSVLH
Trigger: ATGAAGAACTGAAAGACCGCAGCCGTAGAAGAATGA...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGATGGAAGGGTTGACATaGAGTTGGACCAAAATGACT +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRMEGLT*SWTKMT
Trigger: AGTCATTTTGGTCCAACTGCATGTCAACCCTTCCAT...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACCGCAGACGTCTTCAGTaGGTTTCTCTCAGTCAAATA +
Preference number: 4 (lower is better)
Translates to: VTSLNPRLVVLLFISISNRRRLQ*VSLSQI
Trigger: TATTTGACTGAGAGAAACCCACTGAAGACGTCTGCG...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGCGCAGACGTCTTCAGTaGGTTTCTCTCAGTCAAATA +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLRRRLQ*VSLSQI
Trigger: TATTTGACTGAGAGAAACCCACTGAAGACGTCTGCG...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGTGGGAAAATAACTACTaGTACTGTCAGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLWENNY*YCQGHS
Trigger: GCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCA...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWNTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGGGTTGACATGCAGTTaGACCAAAATGACTACTAAC +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRGLTCS*TKMTTN
Trigger: GTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCC...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 72 bp AACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTaGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAAT +
Preference number: 4 (lower is better)
Translates to: NSFQELMQICQF*VSTRGEVLHSN
Trigger: ATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAACATCCGGGGAAATACTaGATCGTCCCATTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQHPGKY*IVPFRP
Trigger: AGGCCGAAATGGGACGATTCAGTATTTCCCCGGATG...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGCATCCGGGGAAATACTaGATCGTCCCATTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKHPGKY*IVPFRP
Trigger: AGGCCGAAATGGGACGATTCAGTATTTCCCCGGATG...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTATGACGCCACCAACTaGAATCTTTTGATGCACACA +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLYDATN*NLLMHT
Trigger: TGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAACTGTAATGAGACTATaGCGCCACCAACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLETVMRL*RHQLKS
Trigger: AGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGT...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGCTTTCTTCACCAACTTaGTATAGAAGGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRLSSPT*YRRQKE
Trigger: TTCCTTCTGCCTTCTATATCAAGTTGGTGAAGAAAG...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCTTTCTTCACCAACTTaGTATAGAAGGCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWLSSPT*YRRQKE
Trigger: TTCCTTCTGCCTTCTATATCAAGTTGGTGAAGAAAG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGTGTACAAGAATGAGATaGCAGTCCAGTGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLCTRMR*QSSANE
Trigger: CTCATTTGCACTGGACTGTCATCTCATTCTTGTACA...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAATGTACAAGAATGAGATaGCAGTCCAGTGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLECTRMR*QSSANE
Trigger: CTCATTTGCACTGGACTGTCATCTCATTCTTGTACA...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTACGTTGTACAAGAATaGGATGACAGTCCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLYVVQE*DDSPVQ
Trigger: TTGCACTGGACTGTCATCTCATTCTTGTACAACGTA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAGCAGTTGGACCAAAATaGCTACTAACACTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEAVGPK*LLTLSL
Trigger: CAAACTGAGTGTTAGTAGTCATTTTGGTCCAACTGC...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp AACACAGCCAGACGGACAATGAGAAGAAGAATATCAGTTCCCAAGATAGAAGAGGCAGTTGGACCAAAATaGCTACTAACACTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: NTARRTMRRRISVPKIEEAVGPK*LLTLSL
Trigger: CAAACTGAGTGTTAGTAGTCATTTTGGTCCAACTGC...CTCTTCTATCTTGGGAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGGCAGTTGGACCAAAATaGCTACTAACACTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLAVGPK*LLTLSL
Trigger: CAAACTGAGTGTTAGTAGTCATTTTGGTCCAACTGC...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TGCACACAACAAGTGAGTTACAGAACTCCGGATTGGGAAAATAACTACTGGTACATTCACCATACACTGTaGCGTACGATAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: CTQQVSYRTPDWENNYWYIHHTL*RTINVL
Trigger: GAGCACATTTATCGTACGTCACAGTGTATGGTGAAT...GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTAACTCACTTGTTGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACGACAGTAATGCAAAATaGGGTGACAAGACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VTSLNPRLVVLLFISISNDSNAK*GDKTVV
Trigger: AACCACTGTCTTGTCACCTCATTTTGCATTACTGTC...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAATTCAGGATCTACATCTaGATAATGGCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKFRIYI*IMAFQS
Trigger: GCTCTGAAAAGCCATTATGCAGATGTAGATCCTGAA...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAGCCCAAGGATTCCACTaGCCACAATCGCATTGCTCA +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQAQGFH*PQSHCS
Trigger: TGAGCAATGCGATTGTGGGCAGTGGAATCCTTGGGC...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR GCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGAACCAGCGAGGAATCTaGACTTCAAAAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLNQRGI*TSKGSE
Trigger: TTCACTTCCTTTTGAAGTGCAGATTCCTCGCTGGTT...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCCTGTTTTACCCAATTaGACTATTTGGTACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANPVLPN*TIWYLK
Trigger: TTTGAGGTACCAAATAGTGCAATTGGGTAAAACAGG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATACCATTCCTTCCTGGTTaGCACAGTATCTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIPFLPG*HSIFSH
Trigger: ATGGGAGAAGATACTGTGGCAACCAGGAAGGAATGG...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACCTTCATGCTAAGCACTaGGAGGAATCGGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNLHAKH*EESGAA
Trigger: AGCTGCACCCGATTCCTCCCAGTGCTTAGCATGAAG...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGAAGACCCTCCTTCATTaGCAGTCTTCAAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLKTLLH*QSSKGD
Trigger: ATCTCCTTTTGAAGACTGCCAATGAAGGAGGGTCTT...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGATGTTCGTTAATGCCTaGATCACCAAAGGCAACTCA +
Preference number: 4 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLMFVNA*ITKGNS
Trigger: TGAGTTGCCTTTGGTGATCCAGGCATTAACGAACAT...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTTAACCCGAGACTCGTaGTTTTGTTGTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWLTRDS*FCCSYP
Trigger: TGGATATGAACAACAAAACCACGAGTCTCGGGTTAA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: ATLSRSSCKFANSWSQLELSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCTGTCAATACAACACTaGAGACAGATGCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWLSIQH*RQMQLN
Trigger: ATTCAGTTGCATCTGTCTCCAGTGTTGTATTGACAG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp TGCACACAACAAGTGAGTTACAGAACTCCGGATTGGGAAAATAACTACTGGTACGGGTTGACATGCAGTTaGACCAAAATGACTACTAAC +
Preference number: 4 (lower is better)
Translates to: CTQQVSYRTPDWENNYWYGLTCS*TKMTTN
Trigger: GTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCC...GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTAACTCACTTGTTGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAATGTCTCCACATTTCTaGCCCTTGCCCCAAACAACA +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIMSPHF*PLPQTT
Trigger: TGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACAT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATGTCTCCACATTTCTaGCCCTTGCCCCAAACAACA +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYMSPHF*PLPQTT
Trigger: TGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACAT...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 72 bp TGTAGCACTCTTTGCCAACAAGCCATACTAGAATTGTaGGCCTCTAACAGTACAGTGGGGATATTTACACTA +
Preference number: 4 (lower is better)
Translates to: CSTLCQQAILEL*ASNSTVGIFTL
Trigger: TAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAGTATGGCTTGTTGGCAAAGAGTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAATGGGGTAGGAGTAGTTaGAGTCGCTGTTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQWGRSS*SRCWNC
Trigger: ACAGTTCCAACAGCGACTTCAACTACTCCTACCCCA...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGGCTCAGATTAAATACTaGCATTCCAAAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWAQIKY*HSKGSS
Trigger: ACTACTTCCTTTGGAATGTCAGTATTTAATCTGAGC...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAACAGGACACGGAACCTaGAATTTCTTGCAAATGACC +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFITGHGT*NFLQMT
Trigger: GGTCATTTGCAAGAAATTTCAGGTTCCGTGTCCTGT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCAGCCAGACGGACAATaGGAAGAAGAATATCAGTTC +
Preference number: 4 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGQPDGQ*EEEYQF
Trigger: GAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGGATGCACACAACAAGTaGGTTACAGAACTCCGGATT +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILDAHNK*VTELRI
Trigger: AATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATC...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp AACACAGCCAGACGGACAATGAGAAGAAGAATATCAGTTCCCAAGATAGAAGAGACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: NTARRTMRRRISVPKIEETFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...CTCTTCTATCTTGGGAACTGATATTCTTCTTCTCATTGTCCGTCTGGCTGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGATTTCTAACTGGGATTaGAATGGAAGGGTTGACATG +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLISNWD*NGRVDM
Trigger: CATGTCAACCCTTCCATTTCAATCCCAGTTAGAAAT...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACCCCAAGACCCAAACCTaGCATTATATACAACCTATT +
Preference number: 4 (lower is better)
Translates to: VTSLNPRLVVLLFISISNPKTQT*HYIQPI
Trigger: AATAGGTTGTATATAATGTCAGGTTTGGGTCTTGGG...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACTGGAACTGTAGCTGCTaGTGTCTTCATCCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNWNCSC*CLHPGK
Trigger: TTTCCCCGGATGAAGACAGCAGCAGCTACAGTTCCA...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCAATAGCTCCAATGTTCTaGATTGTAATTGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPIAPMF*IVIDPD
Trigger: ATCTGGATCAATTACAATGCAGAACATTGGAGCTAT...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAAAAGTTCACTTATTCTaGACTCAGAAGAACCAGCGA +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEKVHLF*TQKNQR
Trigger: TCGCTGGTTCTTCTGAGTGCAGAATAAGTGAACTTT...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTTTTATAAAGCTTACTaGATGAGAAACCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLFYKAY*MRNPVA
Trigger: GGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGCCATTCCTTCCTGGTTaGCACAGTATCTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMPFLPG*HSIFSH
Trigger: ATGGGAGAAGATACTGTGGCAACCAGGAAGGAATGG...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTACAGAACTCCGGATTaGGAAAATAACTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLYRTPD*ENNYWY
Trigger: GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGTTAACCCGAGACTCGTaGTTTTGTTGTTCATATCCA +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLLTRDS*FCCSYP
Trigger: TGGATATGAACAACAAAACCACGAGTCTCGGGTTAA...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATGTCTCCACATTTCTaGCCCTTGCCCCAAACAACA +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMMSPHF*PLPQTT
Trigger: TGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCTGTACAGGTACTTTTaGGACAATTCTTATAGTTAC +
Preference number: 4 (lower is better)
Translates to: VSTFLALAPNNIFSSRANLYRYF*DNSYSY
Trigger: GTAACTATAAGAATTGTCCCAAAAGTACCTGTACAG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGGTTCTGCATTGTAATTaGTCCAGATGCTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILVLHCN*SRCCKL
Trigger: AAGCTTGCAGCATCTGGATCAATTACAATGCAGAAC...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATTATGAAGAGGTAGCTTaGCATAGCTCCAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYYEEVA*HSSNVL
Trigger: CAGAACATTGGAGCTATGTCAAGCTACCTCTTCATA...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGGGAAGAACAGCAGGATaGCAGACAAATGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILGRTAG*QTNEKI
Trigger: GATCTTTTCATTTGTCTGTCATCCTGCTGTTCTTCC...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp GTAGACAAGATAGCTCCCAGAAAATCATCCATTGGAATTTTCCCTAGGCACTTGGGTATGAAGCAATTCTaGCTCAACATGTTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: VDKIAPRKSSIGIFPRHLGMKQF*LNMFVK
Trigger: TTTTACGAACATGTTGAGTCAGAATTGCTTCATACC...CAAGTGCCTAGGGAAAATTCCAATGGATGATTTTCTGGGAGCTATCTTGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGACTGTAATGAGACTATaGCGCCACCAACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILTVMRL*RHQLKS
Trigger: AGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGT...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGATAAAGCTTACTGCATaGGAAACCCAGTGGCCTACG +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKIKLTA*ETQWPT
Trigger: CGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTAT...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGTGTACAAGAATGAGATaGCAGTCCAGTGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILCTRMR*QSSANE
Trigger: CTCATTTGCACTGGACTGTCATCTCATTCTTGTACA...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGATTCACCATACACTGTaGCGTACGATAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILIHHTL*RTINVL
Trigger: GAGCACATTTATCGTACGTCACAGTGTATGGTGAAT...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCATTACAGTTGTAACTaGAACATCCACGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILHYSCN*NIHGRQ
Trigger: CTGTCTTCCGTGGATGTTTCAGTTACAACTGTAATG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACTTTGAGTTTGAGTGGTaGCAATTAATGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNFEFEW*QLMATS
Trigger: GGAGGTGGCCATTAATTGGCACCACTCAAACTCAAA...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGTTTGAGTTTGAGTGGTaGCAATTAATGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMFEFEW*QLMATS
Trigger: GGAGGTGGCCATTAATTGGCACCACTCAAACTCAAA...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATAACCAGCGAGGAATCTaGACTTCAAAAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYNQRGI*TSKGSE
Trigger: TTCACTTCCTTTTGAAGTGCAGATTCCTCGCTGGTT...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGCGGTGTAGCACTCTTTaGCAACAAGCCATACTAGAA +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMRCSTL*QQAILE
Trigger: TTCTAGTATGGCTTGTTGGCAAAGAGTGCTACACCG...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAATGTTCGTTAATGCCTaGATCACCAAAGGCAACTCA +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIMFVNA*ITKGNS
Trigger: TGAGTTGCCTTTGGTGATCCAGGCATTAACGAACAT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp CTAGAATTGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAATGGGAAAATAACTACTaGTACTGTCAGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: LELLASNSTVGIFTLYTQWENNY*YCQGHS
Trigger: GCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCA...TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CCA 90 bp ACAGAACCAAATAGTTCCCGTTCAGATACCACAATCCAGTTTTATCTTCAATGTTGGGAAAATAACTACTaGTACTGTCAGGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TEPNSSRSDTTIQFYLQCWENNY*YCQGHS
Trigger: GCTGTGACCCTGACAGTACCAGTAGTTATTTTCCCA...ACATTGAAGATAAAACTGGATTGTGGTATCTGAACGGGAACTATTTGGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACGAGTTTGAGTTTGAGTaGTGCCAATTAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNEFEFE*CQLMAT
Trigger: GGTGGCCATTAATTGGCACCACTCAAACTCAAACTC...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGGGTTGACATGCAGTTaGACCAAAATGACTACTAAC +
Preference number: 4 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGGLTCS*TKMTTN
Trigger: GTTAGTAGTCATTTTGGTCCAACTGCATGTCAACCC...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATAAGAATGACCACCAATaGCACCAACAGAACCAAATA +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYKNDHQ*HQQNQI
Trigger: TATTTGGTTCTGTTGGTGTCATTGGTGGTCATTCTT...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAACAGGACACGGAACCTaGAATTTCTTGCAAATGACC +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQTGHGT*NFLQMT
Trigger: GGTCATTTGCAAGAAATTTCAGGTTCCGTGTCCTGT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAATTCAGTCACGTTATGTaGCAAAGCAGGTACAAGAGC +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQFSHVM*QSRYKS
Trigger: GCTCTTGTACCTGCTTTGTCACATAACGTGACTGAA...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGTTCAGTCACGTTATGTaGCAAAGCAGGTACAAGAGC +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKFSHVM*QSRYKS
Trigger: GCTCTTGTACCTGCTTTGTCACATAACGTGACTGAA...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATCCAACTGAAATCTTTTaGTGCACACAACAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYPTEIF*CTQQVS
Trigger: ACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGG...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CTAGAATTGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAATATGACGCCACCAACTaGAATCTTTTGATGCACACA +
Preference number: 4 (lower is better)
Translates to: LELLASNSTVGIFTLYTQYDATN*NLLMHT
Trigger: TGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATA...TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFITFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATTCACCATACACTGTaGCGTACGATAAATGTGCTC +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMIHHTL*RTINVL
Trigger: GAGCACATTTATCGTACGTCACAGTGTATGGTGAAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAAACCTTACAGCCAGATaGCCAATTGACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFINLTAR*PIDNSI
Trigger: AATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ACAGAACCAAATAGTTCCCGTTCAGATACCACAATCCAGTTTTATCTTCAATGTGACAGTAATGCAAAATaGGGTGACAAGACAGTGGTT +
Preference number: 4 (lower is better)
Translates to: TEPNSSRSDTTIQFYLQCDSNAK*GDKTVV
Trigger: AACCACTGTCTTGTCACCTCATTTTGCATTACTGTC...ACATTGAAGATAAAACTGGATTGTGGTATCTGAACGGGAACTATTTGGTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR TCA 90 bp ACAGAACCAAATAGTTCCCGTTCAGATACCACAATCCAGTTTTATCTTCAATGTAGGAATATATACACTTaGACCCAAGACCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: TEPNSSRSDTTIQFYLQCRNIYT*TQDPNL
Trigger: CAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCT...ACATTGAAGATAAAACTGGATTGTGGTATCTGAACGGGAACTATTTGGTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR GCA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACATAGCTCCAATGTTCTaGATTGTAATTGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: VTSLNPRLVVLLFISISNIAPMF*IVIDPD
Trigger: ATCTGGATCAATTACAATGCAGAACATTGGAGCTAT...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp CTAGAATTGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAATCATTCTTCTACGGCTaGGGTCTTTCAGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LELLASNSTVGIFTLYTQSFFYG*GLSVLH
Trigger: ATGAAGAACTGAAAGACCGCAGCCGTAGAAGAATGA...TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR GCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAAGTATTTGGCTTATTATaGCTACAAAAAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEVFGLL*LQKGKP
Trigger: TGGTTTGCCTTTTTGTAGGCATAATAAGCCAAATAC...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATAATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTATGCCCATTTTCCACTaGTGGAAGCAATGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGMPIFH*WKQCQK
Trigger: TTTTTGACATTGCTTCCAGCAGTGGAAAATGGGCAT...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATGAGCTCATGCAAATTTaGCAATTCTTGGTCTCAACT +
Preference number: 4 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYELMQI*QFLVST
Trigger: AGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTC...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATACAGAACTCCGGATTaGGAAAATAACTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIYRTPD*ENNYWY
Trigger: GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTA...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGGAGTTTGAGTTTGAGTaGTGCCAATTAATGGCCACC +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKEFEFE*CQLMAT
Trigger: GGTGGCCATTAATTGGCACCACTCAAACTCAAACTC...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACAACACTGGCATCAGATaGACTGAGTTTGAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNNTGIR*TEFEFE
Trigger: CTCAAACTCAAACTCAGTCCATCTGATGCCAGTGTT...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAACCTCTAACAGTACAGTaGGGATATTTACACTATATA +
Preference number: 4 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEPLTVQ*GYLHYI
Trigger: TATATAGTGTAAATATCCCCACTGTACTGTTAGAGG...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTGTTCTGCATTGTAATTaGTCCAGATGCTGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIVLHCN*SRCCKL
Trigger: AAGCTTGCAGCATCTGGATCAATTACAATGCAGAAC...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACAAGAATGACCACCAATaGCACCAACAGAACCAAATA +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNKNDHQ*HQQNQI
Trigger: TATTTGGTTCTGTTGGTGTCATTGGTGGTCATTCTT...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TATATACACAAAGTTAATACACCCAGGTTCTCAAAGGTCTTCCATTACACTAGAGGAAGAACAGCAGGATaGCAGACAAATGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: YIHKVNTPRFSKVFHYTRGRTAG*QTNEKI
Trigger: GATCTTTTCATTTGTCTGTCATCCTGCTGTTCTTCC...TCTAGTGTAATGGAAGACCTTTGAGAACCTGGGTGTATTAACTTTGTGTATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAGGAAGAACAGCAGGATaGCAGACAAATGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQGRTAG*QTNEKI
Trigger: GATCTTTTCATTTGTCTGTCATCCTGCTGTTCTTCC...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TATATACACAAAGTTAATACACCCAGGTTCTCAAAGGTCTTCCATTACACTAGAACTGTAATGAGACTATaGCGCCACCAACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: YIHKVNTPRFSKVFHYTRTVMRL*RHQLKS
Trigger: AGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGT...TCTAGTGTAATGGAAGACCTTTGAGAACCTGGGTGTATTAACTTTGTGTATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTTTGAAATGGAAGGGTTaGCATGCAGTTGGACCAAAA +
Preference number: 4 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDILKWKG*HAVGPK
Trigger: TTTTGGTCCAACTGCATGTCAACCCTTCCATTTCAA...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATTTCTAACTGGGATTaGAATGGAAGGGTTGACATG +
Preference number: 4 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNISNWD*NGRVDM
Trigger: CATGTCAACCCTTCCATTTCAATCCCAGTTAGAAAT...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp CTAGAATTGTTGGCCTCTAACAGTACAGTGGGGATATTTACACTATATACACAACCCAAGACCCAAACCTaGCATTATATACAACCTATT +
Preference number: 4 (lower is better)
Translates to: LELLASNSTVGIFTLYTQPKTQT*HYIQPI
Trigger: AATAGGTTGTATATAATGTCAGGTTTGGGTCTTGGG...TTGTGTATATAGTGTAAATATCCCCACTGTACTGTTAGAGGCCAACAATTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR TCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACAGGAATATATACACTTaGACCCAAGACCCAAACCTG +
Preference number: 4 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNRNIYT*TQDPNL
Trigger: CAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCT...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCATACATTGTTTCATTaGAACGGTGTAGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGHTLFH*NGVALF
Trigger: AAAGAGTGCTACACCGTTTCAATGAAACAATGTATG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR GCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACAACCAGCGAGGAATCTaGACTTCAAAAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNNQRGI*TSKGSE
Trigger: TTCACTTCCTTTTGAAGTGCAGATTCCTCGCTGGTT...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATGGAAGGGTTGACATaGAGTTGGACCAAAATGACT +
Preference number: 4 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIMEGLT*SWTKMT
Trigger: AGTCATTTTGGTCCAACTGCATGTCAACCCTTCCAT...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAAGACCCTCCTTCATTaGCAGTCTTCAAAAGGAGAT +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQKTLLH*QSSKGD
Trigger: ATCTCCTTTTGAAGACTGCCAATGAAGGAGGGTCTT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
3UTR CAA 72 bp ATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAACATACAGATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: IVTSLNPRLVVL*FISISNIQISF
Trigger: GAAACTTATCTGTATGTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
3UTR CAA 72 bp AGACACAAACATTTCAGTCTGAATGAACCAAATTGTTaGGGGACAGAGAAGAAAAGTGATGAACAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RHKHFSLNEPNC*GTEKKSDEQSS
Trigger: TGAACTCTGTTCATCACTTTTCTTCTCTGTCCCCAAACAATTTGGTTCATTCAGACTGAAATGTTTGTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGGGTATGAAGCAATTCTaGCTCAACATGTTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMGMKQF*LNMFVK
Trigger: TTTTACGAACATGTTGAGTCAGAATTGCTTCATACC...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATATACAACCCAACTGAAATCTTTTaGTGCACACAACAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: LQEYIHLNPRPKPDIIYNPTEIF*CTQQVS
Trigger: ACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGG...GTTGTATATAATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR TCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGACATTTCAGTCTGAATaGACCAAATTGTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKTFQSE*TKLFGD
Trigger: GTCCCCAAACAATTTGGTTCATTCAGACTGAAATGT...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACCTTACAGCCAGATaGCCAATTGACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQNLTAR*PIDNSI
Trigger: AATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR TCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGAACCTTACAGCCAGATaGCCAATTGACAATTCCATT +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKNLTAR*PIDNSI
Trigger: AATGGAATTGTCAATTGGTCATCTGGCTGTAAGGTT...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTTTCAGGATCTACATCTaGATAATGGCTTTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIFRIYI*IMAFQS
Trigger: GCTCTGAAAAGCCATTATGCAGATGTAGATCCTGAA...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGAATCAACATAGAAGCTaGAGATGCACCAATAAAACC +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMNQHRS*RCTNKT
Trigger: GGTTTTATTGGTGCATCTGCAGCTTCTATGTTGATT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAATACAGAACTCCGGATTaGGAAAATAACTACTGGTAC +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQYRTPD*ENNYWY
Trigger: GTACCAGTAGTTATTTTCCCAATCCGGAGTTCTGTA...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CCA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGCTGTACAGGTACTTTTaGGACAATTCTTATAGTTAC +
Preference number: 4 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILLYRYF*DNSYSY
Trigger: GTAACTATAAGAATTGTCCCAAAAGTACCTGTACAG...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR GCA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGGTATTTGGCTTATTATaGCTACAAAAAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMVFGLL*LQKGKP
Trigger: TGGTTTGCCTTTTTGTAGGCATAATAAGCCAAATAC...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAATAATTTTGGCCTATTaGCATCAAATGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQIILAY*HQMPIF
Trigger: GAAAATGGGCATTTGATGGCAATAGGCCAAAATTAT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR GCA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGATAATTTTGGCCTATTaGCATCAAATGCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKIILAY*HQMPIF
Trigger: GAAAATGGGCATTTGATGGCAATAGGCCAAAATTAT...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS CCA 90 bp CACGTCGCGGGCGCGACACCCGCGCGGCGGGCCAGGGTGGAAGGCTaGCCAGCCCAACCGACAACGCCCGCCTCGAAAGGAAACGGACCC +
Preference number: 5 (lower is better)
Translates to: HVAGATPARRARVEG*PAQPTTPASKGNGP
Trigger: GGGTCCGTTTCCTTTCGAGGCGGGCGTTGTCGGTTGGGCTGGCCAGCCTTCCACCCTGGCCCGCCGCGCGGGTGTCGCGCCCGCGACGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS GCA 90 bp CTCCTTTTGTCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTaGGAAAGTAGAGGCGGCGCGTCAGGACCGCAGCGCCAGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LLLSLAVGAAARESA*ESRGGASGPQRQPA
Trigger: GGCGGGCTGGCGCTGCGGTCCTGACGCGCCGCCTCTACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 90 bp GGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCCACGTCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: GRNRVQLVALGSFCP*RWVQRPASRPTSRA
Trigger: CGCCCGCGACGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CCA 90 bp AATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCCACGTCGCGGGCGCGACAC +
Preference number: 5 (lower is better)
Translates to: NRVQLVALGSFCPWR*VQRPASRPTSRARH
Trigger: GTGTCGCGCCCGCGACGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CCA 90 bp GGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTCGGTGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: GRNRVQLVALGSFCP*RWVQRPASRPRWSL
Trigger: TAGAGACCACCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CCA 90 bp AATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCTGCGAAAGTAGAGGCGGCG +
Preference number: 5 (lower is better)
Translates to: NRVQLVALGSFCPWR*VQRPASRPAKVEAA
Trigger: CGCCGCCTCTACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 90 bp GGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTGCGAAAGTAGAG +
Preference number: 5 (lower is better)
Translates to: GRNRVQLVALGSFCP*RWVQRPASRPAKVE
Trigger: CTCTACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 90 bp AATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCTCGGTGGTCTCTATTCTCA +
Preference number: 5 (lower is better)
Translates to: NRVQLVALGSFCPWR*VQRPASRPRWSLFS
Trigger: TGAGAATAGAGACCACCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS TCA 90 bp TCTCCCACCTTTTCAGAGCAGCTTGCTTGGTGGGGTAGGAGTAGTTaGAGTCGCTGTTGGAACTGTAGCTGCTGCTGTCTTCATCCGGGG +
Preference number: 5 (lower is better)
Translates to: SPTFSEQLAWWGRSS*SRCWNCSCCCLHPG
Trigger: CCCCGGATGAAGACAGCAGCAGCTACAGTTCCAACAGCGACTTCAACTACTCCTACCCCACCAAGCAAGCTGCTCTGAAAAGGTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553252.1
CDS CCA 90 bp GGAAATACTGAATCGTCCCATTTCGGCCTTCTTCATGCTAAGCACTaGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GNTESSHFGLLHAKH*EESGAASSAGLLLS
Trigger: GGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTTAGCATGAAGAAGGCCGAAATGGGACGATTCAGTATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256689.10
ENST00000547252.5
ENST00000549258.5
ENST00000551405.1
ENST00000553252.1
CDS-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCAAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPSAGLL*SLAVGA
Trigger: TGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCT...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS TCA 90 bp CATAATGGCTTTTCAGAGCAGCTTGCTTGGTGGGGTAGGAGTAGTTaGAGTCGCTGTTGGAACTGTAGCTGCTGCTGTCTTCATCCGGGG +
Preference number: 5 (lower is better)
Translates to: HNGFSEQLAWWGRSS*SRCWNCSCCCLHPG
Trigger: CCCCGGATGAAGACAGCAGCAGCTACAGTTCCAACAGCGACTTCAACTACTCCTACCCCACCAAGCAAGCTGCTCTGAAAAGCCATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256689.10
ENST00000547252.5
ENST00000549258.5
ENST00000551405.1
CDS-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGGLLLS*AVGAAA
Trigger: GGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCC...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp ACAGAACCAAATAGTTCCCGTTCAGATACCACAATCCAGTTTTATCTTCAATGTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: TEPNSSRSDTTIQFYLQCGLLLS*AVGAAA
Trigger: GGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCC...ACATTGAAGATAAAACTGGATTGTGGTATCTGAACGGGAACTATTTGGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCAGCTTTTCAGAGCAGCTaGCTTGGTGGGGTAGGAGTA +
Preference number: 5 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPAFQSS*LGGVGV
Trigger: TACTCCTACCCCACCAAGCAAGCTGCTCTGAAAAGC...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMSAGLL*SLAVGA
Trigger: TGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACAGGTACAAGAGCTGTaGGCTGTGTTAAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPQVQEL*AVLRWC
Trigger: ACACCACCTTAACACAGCCAACAGCTCTTGTACCTG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp AATGGCCACCTCCAGGTGCATTGTGTACCCAATCCAAAACAATCAAGGCCATGCCCACATTTCTGGCCCTaGCCCCAAACAACATTTTTA +
Preference number: 5 (lower is better)
Translates to: NGHLQVHCVPNPKQSRPCPHFWP*PQTTFL
Trigger: TAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGG...GCATGGCCTTGATTGTTTTGGATTGGGTACACAATGCACCTGGAGGTGGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549258.5
CDS-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACTGCCCACAATCGCATaGCTCAGATTAAATACTGAC +
Preference number: 5 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPLPTIA*LRLNTD
Trigger: GTCAGTATTTAATCTGAGCAATGCGATTGTGGGCAG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CAA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCAGGTACAAGAGCTGTaGGCTGTGTTAAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLQVQEL*AVLRWC
Trigger: ACACCACCTTAACACAGCCAACAGCTCTTGTACCTG...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAACAGGTACAAGAGCTGTaGGCTGTGTTAAGGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEQVQEL*AVLRWC
Trigger: ACACCACCTTAACACAGCCAACAGCTCTTGTACCTG...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCCACCTCCAGGTGCATaGTGTACCCAATCCAAAACA +
Preference number: 5 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLPPPGA*CTQSKT
Trigger: TGTTTTGGATTGGGTACACAATGCACCTGGAGGTGG...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGAACCACCTCCAGGTGCATaGTGTACCCAATCCAAAACA +
Preference number: 5 (lower is better)
Translates to: GHNNFGLLPSNAHFPLLEPPPGA*CTQSKT
Trigger: TGTTTTGGATTGGGTACACAATGCACCTGGAGGTGG...TTCCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCCACATTTCTGGCCCTaGCCCCAAACAACATTTTTA +
Preference number: 5 (lower is better)
Translates to: VSTFLALAPNNIFSSRANPHFWP*PQTTFL
Trigger: TAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAAAAAGACCCTCCTTCATaGGCAGTCTTCAAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKKDPPS*AVFKRR
Trigger: TCTCCTTTTGAAGACTGCCAATGAAGGAGGGTCTTT...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCATGAAAAGATCAGAATaGGCACAGCATAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSMKRSE*AQHRQS
Trigger: AGACTGTCTATGCTGTGCCAATTCTGATCTTTTCAT...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCCAAAGCCCCAATCTTTaGTACAGATTTCATAGGTTC +
Preference number: 5 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSQSPNL*YRFHRF
Trigger: GAACCTATGAAATCTGTACAAAAGATTGGGGCTTTG...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGTCAGATGGACTGAGTTaGAGTTTGAGTGGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWSDGLS*SLSGAN
Trigger: ATTGGCACCACTCAAACTCAAACTCAGTCCATCTGA...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCCGAGACTCGTGGTTTaGTTGTTCATATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: VSTFLALAPNNIFSSRANPRLVV*LFISIS
Trigger: AGAAATGGATATGAACAACAAAACCACGAGTCTCGG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp AAATGGACCAACGGTTTCACCCAATGTAGCACTACAAGACGTCTTCCAGTTCCACCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 5 (lower is better)
Translates to: KWTNGFTQCSTTRRLPVPPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...TGGAACTGGAAGACGTCTTGTAGTGCTACATTGGGTGAAACCGTTGGTCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCAGGAATATATACACTaGAACCCAAGACCCAAACCT +
Preference number: 5 (lower is better)
Translates to: VSTFLALAPNNIFSSRANQEYIH*NPRPKP
Trigger: AGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACCAAAGCCCCAATCTTTaGTACAGATTTCATAGGTTC +
Preference number: 5 (lower is better)
Translates to: VSTFLALAPNNIFSSRANQSPNL*YRFHRF
Trigger: GAACCTATGAAATCTGTACAAAAGATTGGGGCTTTG...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCCACCTCCAGGTGCATaGTGTACCCAATCCAAAACA +
Preference number: 5 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGPPPGA*CTQSKT
Trigger: TGTTTTGGATTGGGTACACAATGCACCTGGAGGTGG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGTCAGATGGACTGAGTTaGAGTTTGAGTGGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLSDGLS*SLSGAN
Trigger: ATTGGCACCACTCAAACTCAAACTCAGTCCATCTGA...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTTGGTATTCCCTGGCAGGTCTTAGATACAAAGTCAGCAACTCTTTCCAGGAGCAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 5 (lower is better)
Translates to: LGIPWQVLDTKSATLSRSRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...GCTCCTGGAAAGAGTTGCTGACTTTGTATCTAAGACCTGCCAGGGAATACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGCCGAGACTCGTGGTTTaGTTGTTCATATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRPRLVV*LFISIS
Trigger: AGAAATGGATATGAACAACAAAACCACGAGTCTCGG...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGGCAAACAGCCAAGCATGTGGCTaGATAAAAGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VSTFLALAPNNIFSSRANSQACG*IKVKSL
Trigger: CAAACTCTTAACTTTTATCAAGCCACATGCTTGGCT...GTTTGCCCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCAGGAATATATACACTaGAACCCAAGACCCAAACCT +
Preference number: 5 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWQEYIH*NPRPKP
Trigger: AGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp GCAACTCTTTCCAGGAGCTCATGCAAATTTGCCAATTCTTGGTCTCAACTAGAGCAAGCCATACTAGAATaGTTGGCCTCTAACAGTACA +
Preference number: 5 (lower is better)
Translates to: ATLSRSSCKFANSWSQLEQAILE*LASNST
Trigger: TGTACTGTTAGAGGCCAACAATTCTAGTATGGCTTG...CTCTAGTTGAGACCAAGAATTGGCAAATTTGCATGAGCTCCTGGAAAGAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CAA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGCAAAGCCCCAATCTTTaGTACAGATTTCATAGGTTC +
Preference number: 5 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRQSPNL*YRFHRF
Trigger: GAACCTATGAAATCTGTACAAAAGATTGGGGCTTTG...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CAATTCTTGGTCTCAACTAGAGGTGAGGTTCTGCATTCGAATGGAGTGCCTAAACAGCCAGATGACCAATaGACAATTCCATTATTTGCT +
Preference number: 5 (lower is better)
Translates to: QFLVSTRGEVLHSNGVPKQPDDQ*TIPLFA
Trigger: AGCAAATAATGGAATTGTCAATTGGTCATCTGGCTG...TTTAGGCACTCCATTCGAATGCAGAACCTCACCTCTAGTTGAGACCAAGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS TCA 90 bp GATAGACACTGTAATGAGACTATGACGCCACCAACTGAAATCTTTTaGTGCACACAACAAGTGAGTTACAGAACTCCGGATCGTAAAATG +
Preference number: 5 (lower is better)
Translates to: DRHCNETMTPPTEIF*CTQQVSYRTPDRKM
Trigger: CATTTTACGATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGTGTCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548111.5
CDS TCA 90 bp GATAGACACTGTAATGAGACTATGACGCCACCAACTGAAATCTTTTaGTGCACACAACAAGTGAGTTACAGAACTCCGGATCTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: DRHCNETMTPPTEIF*CTQQVSYRTPDLQK
Trigger: TTTTTGCAGATCCGGAGTTCTGTAACTCACTTGTTGTGTGCATCAAAAGATTTCAGTTGGTGGCGTCATAGTCTCATTACAGTGTCTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546520.1
CDS-3UTR CAA 90 bp CCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTGTAACCTGAGCCAAGCATGTGGCTaGATAAAAGTTAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PSGLRKENLYHIKHRCNLSQACG*IKVKSL
Trigger: CAAACTCTTAACTTTTATCAAGCCACATGCTTGGCT...CAGGTTACACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCTGGCAACTAAGCCATACATaGTCAAGTAATTCACACTTC +
Preference number: 5 (lower is better)
Translates to: LDTIILAYCHQMPIFHCWQLSHT*SSNSHF
Trigger: GAAGTGTGAATTACTTGACAATGTATGGCTTAGTTG...CCAGCAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp AACCATGTCTCCACATTTCTGGCCCTTGCCCCAAACAACATTTTTAGTTCAAGGCAACTAAGCCATACATaGTCAAGTAATTCACACTTC +
Preference number: 5 (lower is better)
Translates to: NHVSTFLALAPNNIFSSRQLSHT*SSNSHF
Trigger: GAAGTGTGAATTACTTGACAATGTATGGCTTAGTTG...CCTTGAACTAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGGAGACATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGCAGCCAGATGACCAATaGACAATTCCATTATTTGCT +
Preference number: 5 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLQPDDQ*TIPLFA
Trigger: AGCAAATAATGGAATTGTCAATTGGTCATCTGGCTG...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CTCTCTGGACACAATAATTTTGGCCTATTGCCATCAAATGCCCATTTTCCACTGAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 5 (lower is better)
Translates to: LSGHNNFGLLPSNAHFPLRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...CAGTGGAAAATGGGCATTTGATGGCAATAGGCCAAAATTATTGTGTCCAGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCCGAGACTCGTGGTTTaGTTGTTCATATCCATTTCT +
Preference number: 5 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGPRLVV*LFISIS
Trigger: AGAAATGGATATGAACAACAAAACCACGAGTCTCGG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp TTTTATAAAGCTTACTGCATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATCCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 5 (lower is better)
Translates to: FYKAYCMRNPVAYAKRTYPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...ATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCATGCAGTAAGCTTTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGCCACATTTCTGGCCCTaGCCCCAAACAACATTTTTA +
Preference number: 5 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMPHFWP*PQTTFL
Trigger: TAAAAATGTTGTTTGGGGCAAGGGCCAGAAATGTGG...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp GTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATATCCATTTCTAACATTAATGGGAATTCATaGTTCAGGAACCTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: VTSLNPRLVVLLFISISNINGNS*FRNLKV
Trigger: TACCTTGAGGTTCCTGAACAATGAATTCCCATTAAT...GTTAGAAATGGATATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAAAGACCCTCCTTCATaGGCAGTCTTCAAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQKDPPS*AVFKRR
Trigger: TCTCCTTTTGAAGACTGCCAATGAAGGAGGGTCTTT...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCTGGACACAATAATTTaGGCCTATTGCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGLDTII*AYCHQM
Trigger: CATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATGAGAAACCCAGTGGCCTACGCAAAGAGAACTTATATCATATCAAACATAGGTCAGCCAGATGACCAATaGACAATTCCATTATTTGCT +
Preference number: 5 (lower is better)
Translates to: MRNPVAYAKRTYIISNIGQPDDQ*TIPLFA
Trigger: AGCAAATAATGGAATTGTCAATTGGTCATCTGGCTG...ACCTATGTTTGATATGATATAAGTTCTCTTTGCGTAGGCCACTGGGTTTCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATAATATATTCACCATACACTGTGACGTACGATAAATGTGCTCTTAAAGCCAAGGCCATACTAGAATTGTaGGCCTCTAACAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: IIYSPYTVTYDKCALKAKAILEL*ASNSTV
Trigger: CACTGTACTGTTAGAGGCCAACAATTCTAGTATGGC...CTTGGCTTTAAGAGCACATTTATCGTACGTCACAGTGTATGGTGAATATATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CAA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTCCCTGTTTTACCCAATaGCACTATTTGGTACCTCAA +
Preference number: 5 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIPCFTQ*HYLVPQ
Trigger: TTGAGGTACCAAATAGTGCAATTGGGTAAAACAGGG...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp ATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACCTGGACACAATAATTTaGGCCTATTGCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: IISNIGVTCGLDLYCRQNLDTII*AYCHQM
Trigger: CATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG...GTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp TGGAATAAAATTGTCACTTCCCTTAACCCGAGACTCGTGGTTTTGTTGTTCATACAACTAAGCCATACATaGTCAAGTAATTCACACTTC +
Preference number: 5 (lower is better)
Translates to: WNKIVTSLNPRLVVLLFIQLSHT*SSNSHF
Trigger: GAAGTGTGAATTACTTGACAATGTATGGCTTAGTTG...TATGAACAACAAAACCACGAGTCTCGGGTTAAGGGAAGTGACAATTTTATTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp CACTACAAGACGTCTTCCAGTTCCATAAGGGTCTTTAATTACACATGTATCTTGACATACATTGTTTCATaGAAACGGTGTAGCACTCTT +
Preference number: 5 (lower is better)
Translates to: HYKTSSSSIRVFNYTCILTYIVS*KRCSTL
Trigger: AAGAGTGCTACACCGTTTCAATGAAACAATGTATGT...CAAGATACATGTGTAATTAAAGACCCTTATGGAACTGGAAGACGTCTTGTAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS-3UTR CAA 90 bp TTAAGAAACTTACAGGAATATATACACTTGAACCCAAGACCCAAACCTGACATTATGAAAAGATCAGAATaGGCACAGCATAGACAGTCT +
Preference number: 5 (lower is better)
Translates to: LRNLQEYIHLNPRPKPDIMKRSE*AQHRQS
Trigger: AGACTGTCTATGCTGTGCCAATTCTGATCTTTTCAT...AATGTCAGGTTTGGGTCTTGGGTTCAAGTGTATATATTCCTGTAAGTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp TATATCATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAACTGGACACAATAATTTaGGCCTATTGCCATCAAATG +
Preference number: 5 (lower is better)
Translates to: YIISNIGVTCGLDLYCRQLDTII*AYCHQM
Trigger: CATTTGATGGCAATAGGCCAAAATTATTGTGTCCAG...TTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATATGATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000551374.5
CDS-3UTR CAA 90 bp ATATCAAACATAGGTGTAACCTGTGGATTAGACCTCTACTGTAGACAAAACATGATTAATGGGAATTCATaGTTCAGGAACCTCAAGGTA +
Preference number: 5 (lower is better)
Translates to: ISNIGVTCGLDLYCRQNMINGNS*FRNLKV
Trigger: TACCTTGAGGTTCCTGAACAATGAATTCCCATTAAT...CATGTTTTGTCTACAGTAGAGGTCTAATCCACAGGTTACACCTATGTTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256689.10
ENST00000549258.5
CDS-3UTR CAA 90 bp TATATACACAAAGTTAATACACCCAGGTTCTCAAAGGTCTTCCATTACACTAGAAGACTCGTGGTTTTGTaGTTCATATCCATTTCTAAC +
Preference number: 5 (lower is better)
Translates to: YIHKVNTPRFSKVFHYTRRLVVL*FISISN
Trigger: GTTAGAAATGGATATGAACAACAAAACCACGAGTCT...TCTAGTGTAATGGAAGACCTTTGAGAACCTGGGTGTATTAACTTTGTGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256689.10
CDS CCA 72 bp GGCGCGACACCCGCGCGGCGGGCCAGGGTGGAAGGCTaGCCAGCCCAACCGACAACGCCCGCCTCGAAAGGA +
Preference number: 6 (lower is better)
Translates to: GATPARRARVEG*PAQPTTPASKG
Trigger: TCCTTTCGAGGCGGGCGTTGTCGGTTGGGCTGGCCAGCCTTCCACCCTGGCCCGCCGCGCGGGTGTCGCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS GCA 72 bp TCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTaGGAAAGTAGAGGCGGCGCGTCAGGACCGCAGCGC +
Preference number: 6 (lower is better)
Translates to: SLAVGAAARESA*ESRGGASGPQR
Trigger: GCGCTGCGGTCCTGACGCGCCGCCTCTACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 72 bp CGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: RVQLVALGSFCP*RWVQRPASRPR
Trigger: CCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CCA 72 bp CGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: RVQLVALGSFCP*RWVQRPASRPA
Trigger: CGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 72 bp CAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCCACGTCGCGG +
Preference number: 6 (lower is better)
Translates to: QLVALGSFCPWR*VQRPASRPTSR
Trigger: CCGCGACGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CCA 72 bp CGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTaGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCCACG +
Preference number: 6 (lower is better)
Translates to: RVQLVALGSFCP*RWVQRPASRPT
Trigger: CGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CAA 90 bp TGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCCACGTCGCGGGC +
Preference number: 6 (lower is better)
Translates to: WEESGAASSAGLLLS*AVGAAARESAHVAG
Trigger: GCCCGCGACGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CAA 72 bp TCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SGAASSAGLLLS*AVGAAARESAS
Trigger: CGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CAA 72 bp TCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SGAASSAGLLLS*AVGAAARESAC
Trigger: GCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CAA 72 bp TCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCCAC +
Preference number: 6 (lower is better)
Translates to: SGAASSAGLLLS*AVGAAARESAH
Trigger: GTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CCA 72 bp CAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCTCGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: QLVALGSFCPWR*VQRPASRPRWS
Trigger: AGACCACCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CAA 90 bp TGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTCGGTGGTCTCT +
Preference number: 6 (lower is better)
Translates to: WEESGAASSAGLLLS*AVGAAARESASVVS
Trigger: AGAGACCACCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CAA 90 bp AAGCACTGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: KHWEESGAASSAGLL*SLAVGAAARESASV
Trigger: CACCGAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256689.10
ENST00000549258.5
ENST00000553252.1
CDS CAA 90 bp AAGCACTGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCCACGTC +
Preference number: 6 (lower is better)
Translates to: KHWEESGAASSAGLL*SLAVGAAARESAHV
Trigger: GACGTGGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551405.1
CDS CAA 72 bp GAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCG +
Preference number: 6 (lower is better)
Translates to: EESGAASSAGLL*SLAVGAAARES
Trigger: CGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256689.10
ENST00000547252.5
ENST00000549258.5
ENST00000551405.1
ENST00000553252.1
CDS CAA 90 bp AAGCACTGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTaGTCCTTGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTGCGAA +
Preference number: 6 (lower is better)
Translates to: KHWEESGAASSAGLL*SLAVGAAARESACE
Trigger: TTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 72 bp CAGCTAGTAGCGCTGGGCTCCTTTTGTCCTTGGCGGTaGGTGCAGCGGCCCGCGAGTCGGCCTGCGAAAGTA +
Preference number: 6 (lower is better)
Translates to: QLVALGSFCPWR*VQRPASRPAKV
Trigger: TACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CAA 90 bp TGGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTCCTTTTGTCCTaGGCGGTGGGTGCAGCGGCCCGCGAGTCGGCCTGCGAAAGTAGA +
Preference number: 6 (lower is better)
Translates to: WEESGAASSAGLLLS*AVGAAARESACESR
Trigger: TCTACTTTCGCAGGCCGACTCGCGGGCCGCTGCACCCACCGCCAAGGACAAAAGGAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547252.5
CDS CCA 72 bp GAATCGTCCCATTTCGGCCTTCTTCATGCTAAGCACTaGGAGGAATCGGGTGCAGCTAGTAGCGCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: ESSHFGLLHAKH*EESGAASSAGL
Trigger: GAGCCCAGCGCTACTAGCTGCACCCGATTCCTCCCAGTGCTTAGCATGAAGAAGGCCGAAATGGGACGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256689.10
ENST00000547252.5
ENST00000549258.5
ENST00000551405.1
ENST00000553252.1
CDS TCA 72 bp TTTTCAGAGCAGCTTGCTTGGTGGGGTAGGAGTAGTTaGAGTCGCTGTTGGAACTGTAGCTGCTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: FSEQLAWWGRSS*SRCWNCSCCCL
Trigger: AAGACAGCAGCAGCTACAGTTCCAACAGCGACTTCAACTACTCCTACCCCACCAAGCAAGCTGCTCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256689.10
ENST00000547252.5
ENST00000549258.5
ENST00000551405.1
ENST00000553252.1
CDS CAA 72 bp AAAGTGTCACAACTTCTCCCACCTTTTCAGAGCAGCTaGCTTGGTGGGGTAGGAGTAGTTGAAGTCGCTGTT +
Preference number: 6 (lower is better)
Translates to: KVSQLLPPFQSS*LGGVGVVEVAV
Trigger: AACAGCGACTTCAACTACTCCTACCCCACCAAGCAAGCTGCTCTGAAAAGGTGGGAGAAGTTGTGACACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553252.1
CDS TCA 72 bp AAACTGTGCCTCTTTCTCTGCTGTTTCCTGAACATCTaGACACTTAAAGATCATTTTATATCTTATGGTGAA +
Preference number: 6 (lower is better)
Translates to: KLCLFLCCFLNI*TLKDHFISYGE
Trigger: TTCACCATAAGATATAAAATGATCTTTAAGTGTTCAGATGTTCAGGAAACAGCAGAGAAAGAGGCACAGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546520.1