RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC37A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000157800

Ensembl transcript IDs: ENST00000326232.14, ENST00000340308.7, ENST00000447932.6, ENST00000460560.5, ENST00000461089.5, ENST00000462881.1, ENST00000464834.5, ENST00000464865.5, ENST00000467233.1, ENST00000469193.5, ENST00000469636.1, ENST00000473060.5, ENST00000473707.5, ENST00000477006.1, ENST00000477571.5, ENST00000484416.5, ENST00000485139.1, ENST00000485538.1, ENST00000485861.5, ENST00000487319.1, ENST00000490760.5, ENST00000491357.5, ENST00000491505.1, ENST00000492027.5, ENST00000493423.1, ENST00000495257.1, ENST00000498469.5

Found 648 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTGCTGGTCAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTA +
Preference number: 1 (lower is better)
Translates to: TAGQHLRWLAVLRDA*QSKIRLELLDKPKL
Trigger: TAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTGACCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
3UTR TCA 90 bp GTCCTCTTGGGGAATAGTGCCATATTAGGGCCTCAGTATGGGCTGTaGTCTGTTGTCAGTTCAGGCTTGGAGGGTAGAAGACCAGGCTAC +
Preference number: 1 (lower is better)
Translates to: VLLGNSAILGPQYGL*SVVSSGLEGRRPGY
Trigger: GTAGCCTGGTCTTCTACCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATGGCACTATTCCCCAAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CCA 90 bp CCATCCACAATTCCTGTGACAGTGGCCAAAGCTTCACTGCTCCTTTaGATGAGCTCCTGGCGACCCAAGTCCGCAGAAATAGCAGAACTA +
Preference number: 1 (lower is better)
Translates to: PSTIPVTVAKASLLL*MSSWRPKSAEIAEL
Trigger: TAGTTCTGCTATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 90 bp CTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAG +
Preference number: 1 (lower is better)
Translates to: LNRPNKDAGRVRGQR*WQSQKSLGTFMKQQ
Trigger: CTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
3UTR GCA 90 bp TGGAGGGTAGAAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTaGTGCTGCTATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGA +
Preference number: 1 (lower is better)
Translates to: WRVEDQATKPLHPFY*CCYVPFVCEFTEQG
Trigger: TCCTTGCTCAGTGAACTCACAAACAAAGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTTCTACCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 90 bp AACCATACTGAAGAACAGAAGAAGCTAGGCACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCACTCCAGAGACCAAAAACAACTCCTC +
Preference number: 1 (lower is better)
Translates to: NHTEEQKKLGTLPKC*PPKHRHSRDQKQLL
Trigger: GAGGAGTTGTTTTTGGTCTCTGGAGTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTGCCTAGCTTCTTCTGTTCTTCAGTATGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490760.5
3UTR CCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTGTAATCCCCACACTT +
Preference number: 1 (lower is better)
Translates to: KWYPVCRGKESLSLH*GTNGCCSRSVIPTL
Trigger: AAGTGTGGGGATTACAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR CCA 90 bp CCTGTGACAGTGGCCAAAGCTTCACTGCTCCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAAATAGCAGAACTAATCATATTAGAA +
Preference number: 1 (lower is better)
Translates to: PVTVAKASLLLWMSS*RPKSAEIAELIILE
Trigger: TTCTAATATGATTAGTTCTGCTATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCACTGTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTC +
Preference number: 1 (lower is better)
Translates to: LPFVEHTTNTNHAWL*LLFTPFSRLEKVQV
Trigger: GACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR GCA 90 bp TTCCTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTaGTTCGGCTGTGAGTTACACGTCGGAATGTTCAAGATAAATGAT +
Preference number: 1 (lower is better)
Translates to: FLEDPKFPDNKSGME*FGCELHVGMFKIND
Trigger: ATCATTTATCTTGAACATTCCGACGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR TCA 90 bp TTTCTAAAGAACGGACACCCCTCAGGCCCTAGTAATCCATTCATGTaGTTCAATGTCATGTACAGACAGTCCTCAGCTTCTGATTTTTGG +
Preference number: 1 (lower is better)
Translates to: FLKNGHPSGPSNPFM*FNVMYRQSSASDFW
Trigger: CCAAAAATCAGAAGCTGAGGACTGTCTGTACATGACATTGAATCACATGAATGGATTACTAGGGCCTGAGGGGTGTCCGTTCTTTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR CCA 90 bp TGTAAACTCATTACCAAAGCAAAATGCAATGATCTCTTCCATTTGTaGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGT +
Preference number: 1 (lower is better)
Translates to: CKLITKAKCNDLFHL*NIPPTQTTRGFASC
Trigger: ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATCATTGCATTTTGCTTTGGTAATGAGTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
3UTR CCA 90 bp CTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCT +
Preference number: 1 (lower is better)
Translates to: LDYKIEFVLDDSAQL*AILSVLSTFRVDEA
Trigger: AGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCGAGGGCCAGGTGTGGTaGCTCGCACTTTGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSEGQVW*LALWKA
Trigger: GGCCTTCCAAAGTGCGAGCCACCACACCTGGCCCTC...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCCAAGAGGGCCAGGTGTaGTGGCTCGCACTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVQEGQV*WLALWK
Trigger: CTTCCAAAGTGCGAGCCACCACACCTGGCCCTCTTG...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGCCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 2 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGCTGATGACGGGAGCCTaGCACCACCCATTCCTCATT +
Preference number: 2 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLLMTGA*HHPFLI
Trigger: AATGAGGAATGGGTGGTGGCAGGCTCCCGTCATCAG...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGCAGCTTTGGGGAAAATaGAGCTGCAGCATGGCTCCA +
Preference number: 2 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLQLWGK*SCSMAP
Trigger: TGGAGCCATGCTGCAGCTTCATTTTCCCCAAAGCTG...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGATCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 2 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CCA 90 bp ATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTTGTAATCCCCACACTTaGGGAGGCCGAGGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: IQCAEEKSRFLCTGEQMVCNPHT*GGRGGQ
Trigger: CTGCCCGCCTCGGCCTCCCCAAGTGTGGGGATTACA...AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR-3UTR CCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCAATGAAGCTGCAGCATaGCTCCACTTGCTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVNEAAA*LHLLVS
Trigger: GGACACCAGCAAGTGGAGCCATGCTGCAGCTTCATT...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp AGAGGAAAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGAGGCGGGCAGATCATaGGATCAGGAGATCGAGACC +
Preference number: 2 (lower is better)
Translates to: RGKWYPVCRGKESLSLHWEAGRS*DQEIET
Trigger: GGTCTCGATCTCCTGATCTCATGATCTGCCCGCCTC...CCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR CAA 90 bp ACCATCCACAATTCCTGTGACAGTGGCCAAAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACCCAAGTCCGCAGAAATAGCAGAACT +
Preference number: 2 (lower is better)
Translates to: TIHNSCDSGQSFTAP*DELLATQVRRNSRT
Trigger: AGTTCTGCTATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCGTAGTACATCAGAGATaGAGCCTTGCAAAGTTCCAC +
Preference number: 2 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVVVHQR*SLAKFH
Trigger: GTGGAACTTTGCAAGGCTTCATCTCTGATGTACTAC...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 2 (lower is better)
Translates to: NRGILCPRQACSSVQLEHNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR GCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAACCATTGTCATGGAGCTaGCCCATCTGGCCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKPLSWS*PIWPRS
Trigger: ACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGG...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 2 (lower is better)
Translates to: SICGTYHQHKPRVALPPVGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCAGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR GCA 90 bp GTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: VEHTTNTNHAWLCLLFTPVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR GCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGGATGAGGGACCCAACTaGCAGAAGCAGACTCAGGGC +
Preference number: 2 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLDEGPN*QKQTQG
Trigger: GCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATC...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGCCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 2 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGCTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 2 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLLIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp TTGTCAGTTCAGGCTTGGAGGGTAGAAGACCAGGCTACTAAGCCCTaGCATCCCTTCTATTGCTGCTGCTATGTCCCCTTTGTTTGTGAG +
Preference number: 2 (lower is better)
Translates to: LSVQAWRVEDQATKP*HPFYCCCYVPFVCE
Trigger: CTCACAAACAAAGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTTCTACCCTCCAAGCCTGAACTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACCAGTGAGTACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 2 (lower is better)
Translates to: GVVILIGMVDGSWSCESSPVSTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTACTCACTGG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp GAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGAAGATAACGATCCCAACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 2 (lower is better)
Translates to: ERPISSGDTRSPKKITIPTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...TGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490760.5
3UTR-3UTR CCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAACAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 2 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp CTTGCCTGGATTGGGTTGTTGTCATTTGCCTTTGAAGTTTCAGCTTaGGGGAAAATGAAGCTGCAGCATGGCTCCACTTGCTGGTGTCCT +
Preference number: 2 (lower is better)
Translates to: LAWIGLLSFAFEVSA*GKMKLQHGSTCWCP
Trigger: AGGACACCAGCAAGTGGAGCCATGCTGCAGCTTCATTTTCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp AGCAGGAGCCCGCTGATCCACTTAATTTGCTATGAAATGACTTCCTaGGTCAGAAGTAATGCCATATGGCCTACCTTGACGGTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: SRSPLIHLICYEMTS*VRSNAIWPTLTVGR
Trigger: CCTACCCACCGTCAAGGTAGGCCATATGGCATTACTTCTGACCAAGGAAGTCATTTCATAGCAAATTAAGTGGATCAGCGGGCTCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp CCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 2 (lower is better)
Translates to: PPVHSIFKARESSSPKQQGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...CTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 2 (lower is better)
Translates to: GVVILIGMVDGSWSCESSHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR GCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 2 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACAGATCAGACACAGAGTaGCTGAGCCAATCAACAGGC +
Preference number: 2 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDRSDTE*LSQSTG
Trigger: GCCTGTTGATTGGCTCAGTCACTCTGTGTCTGATCT...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGGCTTCTAGGGCTGAATaGCGTTTAGATCAGACACAG +
Preference number: 2 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLASRAE*RLDQTQ
Trigger: CTGTGTCTGATCTAAACGTCATTCAGCCCTAGAAGC...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGTCATCAGAAGGGCATTaGTGGACTTATCATTTGGAG +
Preference number: 2 (lower is better)
Translates to: HIRASVWAVICCQFRLGGSSEGH*WTYHLE
Trigger: CTCCAAATGATAAGTCCATCAATGCCCTTCTGATGA...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: QRSKMLAESEVTRHIHETVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
3UTR-3UTR GCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: RVALPPVHSIFKARESSSVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR GCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTTCAGAGATGAAGCCTTaGAAAGTTCCACCTATGATC +
Preference number: 2 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPSEMKP*KVPPMI
Trigger: GATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGA...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp TATGAAATGACTTCCTTGGTCAGAAGTAATGCCATATGGCCTACCTaGACGGTGGGTAGGGCATTCTGTAAGTCCACTTACTGTGGCTCT +
Preference number: 2 (lower is better)
Translates to: YEMTSLVRSNAIWPT*TVGRAFCKSTYCGS
Trigger: AGAGCCACAGTAAGTGGACTTACAGAATGCCCTACCCACCGTCAAGGTAGGCCATATGGCATTACTTCTGACCAAGGAAGTCATTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 2 (lower is better)
Translates to: PVHSIFKARESSSPKQQLGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR GCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACCCTTCTATTGCTGCTaGTATGTCCCCTTTGTTTGT +
Preference number: 2 (lower is better)
Translates to: GVVILIGMVDGSWSCESSPFYCC*YVPFVC
Trigger: ACAAACAAAGGGGACATAGCAGCAGCAATAGAAGGG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR GCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACATCCCTTCTATTGCTaGTGCTATGTCCCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: GVVILIGMVDGSWSCESSHPFYC*CYVPFV
Trigger: AACAAAGGGGACATAGCAGCAGCAATAGAAGGGATG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: SSICGTYHQHKPRVA*PPVHSIFKARESSS
Trigger: ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR TCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: SSICGTYHQHKPRVALPPHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR GCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: MLAESEVTRHIHETTAKIVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
3UTR-3UTR CCA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTCCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 2 (lower is better)
Translates to: EAACARDQSSKNRLSRLAPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 2 (lower is better)
Translates to: PVHSIFKARESSSPKQQLGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR CAA 90 bp CTCTGTAAACTCATTACCAAAGCAAAATGCAATGATCTCTTCCATTaGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LCKLITKAKCNDLFH*WNIPPTQTTRGFAS
Trigger: GGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATCATTGCATTTTGCTTTGGTAATGAGTTTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR CCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCACAACAAATCTGGGATaGAGTGCTTCGGCTGTGAGT +
Preference number: 2 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSTTNLG*SASAVS
Trigger: ACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGT...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAGATGGACTTATCATTTaGAGAACGACTATACCCGAT +
Preference number: 2 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKDGLII*RTTIPD
Trigger: ATCGGGTATAGTCGTTCTCCAAATGATAAGTCCATC...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp ACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATaGGGTTGTTGTCATTTGCCTTTGAAGTTTCAGCTTTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: TFILEGSKPLAVLPG*GCCHLPLKFQLWGK
Trigger: TTTTCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 90 bp ATCACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTaGCCTGGATTGGGTTGTTGTCATTTGCCTTTGAAGTTTCAGCTT +
Preference number: 2 (lower is better)
Translates to: ITQTFILEGSKPLAV*PGLGCCHLPLKFQL
Trigger: AAGCTGAAACTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR TCA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGGGTATTAAATGCATTTaGCTTCCAATGGGTTTACTG +
Preference number: 2 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLGIKCI*LPMGLL
Trigger: CAGTAAACCCATTGGAAGTCAAATGCATTTAATACC...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITDSAQL*AILSVL
Trigger: CAGAACACTTAGAATTGCCCACAGTTGGGCAGAATC...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCTCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 2 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: LCLLFTPFSRLEKVQVQNHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...GTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR TCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACATTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 2 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR GCA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGGTAACTCCAGGAAGCTaGTTGTGCCAGAGATCAATC +
Preference number: 2 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWVTPGS*LCQRSI
Trigger: GATTGATCTCTGGCACAAGCAGCTTCCTGGAGTTAC...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR TCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTACACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 2 (lower is better)
Translates to: HSIFKARESSSPKQQLRLHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR-3UTR TCA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGACAGTCCTCAGCTTCTaGTTTTTGGACTTTACAATG +
Preference number: 2 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWTVLSF*FLDFTM
Trigger: CATTGTAAAGTCCAAAAATCAGAAGCTGAGGACTGT...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CCA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 2 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR TCA 72 bp GTCTCACTGCCCCTGACCTTGAGGGTCTGGATGTCCTaGAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: VSLPLTLRVWMS*RSQCPLSWSCP
Trigger: GGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACCCTCAAGGTCAGGGGCAGTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 72 bp ATTTGGAGAACGACTATACCCGATGAGGGACCCAACTaGCAGAAGCAGACTCAGGGCAAGAACCGGCGCTCT +
Preference number: 3 (lower is better)
Translates to: IWRTTIPDEGPN*QKQTQGKNRRS
Trigger: AGAGCGCCGGTTCTTGCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATCGGGTATAGTCGTTCTCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCCTTGCCTGGATTGGGTaGTTGTCATTTGCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSLAWIG*LSFAFE
Trigger: TTCAAAGGCAAATGACAACAACCCAATCCAGGCAAG...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR TCA 72 bp CAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTGGAGCTCCTAGACAAA +
Preference number: 3 (lower is better)
Translates to: QHLRWLAVLRDA*QSKIRLELLDK
Trigger: TTTGTCTAGGAGCTCCAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
3UTR-3UTR CAA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTAAGCCTTTAGCAGTCTaGCCTGGATTGGGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTKPLAV*PGLGCC
Trigger: ACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTT...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 72 bp CCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCACTCGGCACATTCATG +
Preference number: 3 (lower is better)
Translates to: PNKDAGRVRGQR*WQSQKSLGTFM
Trigger: CATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
3UTR GCA 72 bp GGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTTGCTGCTCCAGATCTG +
Preference number: 3 (lower is better)
Translates to: GIQCAEEKSRFL*TGEQMVAAPDL
Trigger: CAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR CCA 72 bp GTGGCCAAAGCTTCACTGCTCCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAAATAGCAGAACTAATC +
Preference number: 3 (lower is better)
Translates to: VAKASLLLWMSS*RPKSAEIAELI
Trigger: GATTAGTTCTGCTATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CCA 72 bp ATTCCTGTGACAGTGGCCAAAGCTTCACTGCTCCTTTaGATGAGCTCCTGGCGACCCAAGTCCGCAGAAATA +
Preference number: 3 (lower is better)
Translates to: IPVTVAKASLLL*MSSWRPKSAEI
Trigger: TATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCACTGTCACAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACC +
Preference number: 3 (lower is better)
Translates to: GVVILIGMVDGSWSCESSSFTAP*DELLAT
Trigger: GGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCT...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAATACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 72 bp GAAGAACAGAAGAAGCTAGGCACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCACTCCAGAGACCAAAAA +
Preference number: 3 (lower is better)
Translates to: EEQKKLGTLPKC*PPKHRHSRDQK
Trigger: TTTTTGGTCTCTGGAGTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTGCCTAGCTTCTTCTGTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490760.5
3UTR CCA 72 bp CCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTGTAATC +
Preference number: 3 (lower is better)
Translates to: PVCRGKESLSLH*GTNGCCSRSVI
Trigger: GATTACAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR-3UTR CAA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 3 (lower is better)
Translates to: HIRASVWAVICCQFRLGGAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTTTGGGTTGTTGTCATTaGCCTTTGAAGTTTCAGCTT +
Preference number: 3 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTLGCCH*PLKFQL
Trigger: AAGCTGAAACTTCAAAGGCAAATGACAACAACCCAA...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGCATTCCTCATTTCCTTaGTCCTCAGCAAGCACCTCA +
Preference number: 3 (lower is better)
Translates to: HIRASVWAVICCQFRLGGHSSFP*SSASTS
Trigger: TGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATG...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAATGGGCTGTGATCTGTaGTCAGTTCAGGCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: GVVILIGMVDGSWSCESSMGCDL*SVQAWR
Trigger: CCTCCAAGCCTGAACTGACAACAGATCACAGCCCAT...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR TCA 72 bp GGGAATAGTGCCATATTAGGGCCTCAGTATGGGCTGTaGTCTGTTGTCAGTTCAGGCTTGGAGGGTAGAAGA +
Preference number: 3 (lower is better)
Translates to: GNSAILGPQYGL*SVVSSGLEGRR
Trigger: TCTTCTACCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATGGCACTATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR GCA 72 bp ACAGTGAACAGAGGGATTCTTTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAGCATTTGATCAGGATT +
Preference number: 3 (lower is better)
Translates to: TVNRGILCPRQA*SSVQLEHLIRI
Trigger: AATCCTGATCAAATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR TCA 72 bp TTCTGCCTCAATACCCGAGAGACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAAGATAACGATCCCACC +
Preference number: 3 (lower is better)
Translates to: FCLNTRETNFFW*HQESKEDNDPT
Trigger: GGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484416.5
3UTR GCA 72 bp GTGGAACATACCACCAACACAAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: VEHTTNTNHAWL*LLFTPFSRLEK
Trigger: TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR GCA 72 bp GATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTaGTTCGGCTGTGAGTTACACGTCGGAATGTTCAAG +
Preference number: 3 (lower is better)
Translates to: DPKFPDNKSGME*FGCELHVGMFK
Trigger: CTTGAACATTCCGACGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR CCA 72 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: PFVEHTTNTNHA*LCLLFTPFSRL
Trigger: TAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR CCA 72 bp CCTGTGAATCTTCAAAAGCTCATTCCATTGTTCTATTaGGCCAGCTGCTTCAGGGTGGTGGGAAACACGGTA +
Preference number: 3 (lower is better)
Translates to: PVNLQKLIPLFY*ASCFRVVGNTV
Trigger: TACCGTGTTTCCCACCACCCTGAAGCAGCTGGCCCAATAGAACAATGGAATGAGCTTTTGAAGATTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 3 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR TCA 72 bp AACGGACACCCCTCAGGCCCTAGTAATCCATTCATGTaGTTCAATGTCATGTACAGACAGTCCTCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: NGHPSGPSNPFM*FNVMYRQSSAS
Trigger: AGAAGCTGAGGACTGTCTGTACATGACATTGAATCACATGAATGGATTACTAGGGCCTGAGGGGTGTCCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR GCA 72 bp GCTTTGGGGAAAATGAAGCTGCAGCATGGCTCCACTTaGTGGTGTCCTACTAAATATGACATGTGGCATTTC +
Preference number: 3 (lower is better)
Translates to: ALGKMKLQHGST*WCPTKYDMWHF
Trigger: GAAATGCCACATGTCATATTTAGTAGGACACCAGCAAGTGGAGCCATGCTGCAGCTTCATTTTCCCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTACTCCAGGAAGCTGCTaGTGCCAGAGATCAATCCTC +
Preference number: 3 (lower is better)
Translates to: EAACARDQSSKNRLSRLATPGSC*CQRSIL
Trigger: GAGGATTGATCTCTGGCACAAGCAGCTTCCTGGAGT...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CAA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAACTCCAGGAAGCTGCTaGTGCCAGAGATCAATCCTC +
Preference number: 3 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTTPGSC*CQRSIL
Trigger: GAGGATTGATCTCTGGCACAAGCAGCTTCCTGGAGT...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR TCA 72 bp CAGTCTTGCCTGGATTGGGTTGTTGTCATTTGCCTTTaGAGTTTCAGCTTTGGGGAAAATGAAGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: QSCLDWVVVICL*SFSFGENEAAA
Trigger: TGCTGCAGCTTCATTTTCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGATCAGAGATGAAGCCTaGCAAAGTTCCACCTATGAT +
Preference number: 3 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLIRDEA*QSSTYD
Trigger: ATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGAT...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGGTCATCAGAAGGGCATaGATGGACTTATCATTTGGA +
Preference number: 3 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLVIRRA*MDLSFG
Trigger: TCCAAATGATAAGTCCATCAATGCCCTTCTGATGAC...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGTGTTGTCATTTGCCTTaGAAGTTTCAGCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLCCHLP*KFQLWG
Trigger: TCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACA...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CCA 72 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTaGTCCTGTGAATCTTCAAAAGCTCATTCCATTGTT +
Preference number: 3 (lower is better)
Translates to: GVVILIGMVDGS*SCESSKAHSIV
Trigger: AACAATGGAATGAGCTTTTGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR-3UTR CAA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 3 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
3UTR-3UTR CAA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 3 (lower is better)
Translates to: EAACARDQSSKNRLSRLANDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR CCA 72 bp AAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTG +
Preference number: 3 (lower is better)
Translates to: KIEFVLDDSAQL*AILSVLSTFRV
Trigger: CACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCCTCGCCGGGTCAGCTTaGCTCCGCTGCCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPLAGSA*LRCPPP
Trigger: GGGAGGCGGGCAGCGGAGCCAAGCTGACCCGGCGAG...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCTCAGCTTGGCTCCGCTaGCCGCCTCCCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFSAWLR*PPPPPP
Trigger: TGGCGGCGGGGGAGGCGGGCAGCGGAGCCAAGCTGA...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp AAGCTAGGCACGCTCCCAAAATGTTGCCCACCGAAGCACAGGCACTCCAGAGACCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KLGTLPKCCPPKHRHSRDHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...GTCTCTGGAGTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTGCCTAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR CCA 90 bp TCCACACTGATGACGGGAGCCTGCCACCACCCATTCCTCATTTCCTTTGTCCTCGAGGGCCAGGTGTGGTaGCTCGCACTTTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: STLMTGACHHPFLISFVLEGQVW*LALWKA
Trigger: GGCCTTCCAAAGTGCGAGCCACCACACCTGGCCCTC...GAGGACAAAGGAAATGAGGAATGGGTGGTGGCAGGCTCCCGTCATCAGTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCGGGGTTTTGCCCTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSGVLPC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACAGGGCAAAACCCC...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGACTGATGACGGGAGCCTaGCACCACCCATTCCTCATT +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRLMTGA*HHPFLI
Trigger: AATGAGGAATGGGTGGTGGCAGGCTCCCGTCATCAG...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTCCATTGTCATGGAGCTaGCCCATCTGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTPLSWS*PIWPRS
Trigger: ACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGG...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFFRDPQ*SPLSSP
Trigger: GGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAA...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCAATGAAGCTGCAGCATaGCTCCACTTGCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSNEAAA*LHLLVS
Trigger: GGACACCAGCAAGTGGAGCCATGCTGCAGCTTCATT...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp TCCACACTGATGACGGGAGCCTGCCACCACCCATTCCTCATTTCCTTTGTCCTCTGGAGCTGCCCCATCTaGCCCAGGAGTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: STLMTGACHHPFLISFVLWSCPI*PRSWRS
Trigger: GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCA...GAGGACAAAGGAAATGAGGAATGGGTGGTGGCAGGCTCCCGTCATCAGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGACATGCTGGAGTGCAGTaGTACGATCTTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRHAGVQ*YDLGPL
Trigger: CAGTGGGCCAAGATCGTACCACTGCACTCCAGCATG...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp CCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTaGGAGAAGCTGAAGGAGGATCAGGGGAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PIVMELPHLAQE*EKLKEDQGKVE
Trigger: CTCTACCTTCCCCTGATCCTCCTTCAGCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAGCAAAGTTCCACCTATaGTCCCTCCAACGTCGTACC +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRAKFHL*SLQRRT
Trigger: GGTACGACGTTGGAGGGATCATAGGTGGAACTTTGC...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGACAGCTTTGGGGAAAATaGAGCTGCAGCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRQLWGK*SCSMAP
Trigger: TGGAGCCATGCTGCAGCTTCATTTTCCCCAAAGCTG...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IQCAEEKSRFLCTGEQMVFRDPQ*SPLSSP
Trigger: GGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAA...AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CCA 90 bp GACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACGCCCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: DTRSPKKITIPPANCTDAHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...GGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR CCA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR CCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCTGGTGGCTCGCACTTTaGAAGGCCAAGGCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVWWLAL*KAKAGR
Trigger: TCTACCTGCCTTGGCCTTCCAAAGTGCGAGCCACCA...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATGATGAGGGACCCAACTaGCAGAAGCAGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NRGILCPRQACSSVQLEHDEGPN*QKQTQG
Trigger: GCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATC...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGTGTCTCCTGGCCCACTaGAGCTCCAATGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWCLLAH*SSNAPR
Trigger: TCGGGGAGCATTGGAGCTGCAGTGGGCCAGGAGACA...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485538.1
CDS-3UTR CCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCCTCGCCGGGTCAGCTTaGCTCCGCTGCCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITLAGSA*LRCPPP
Trigger: GGGAGGCGGGCAGCGGAGCCAAGCTGACCCGGCGAG...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp AGAGGAAAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGTGTAATCCCCACACTTaGGGAGGCCGAGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGKWYPVCRGKESLSLHWCNPHT*GGRGGQ
Trigger: CTGCCCGCCTCGGCCTCCCCAAGTGTGGGGATTACA...CCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CCA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGCAGTGCCCATTGTCATaGAGCTGCCCCATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HIRASVWAVICCQFRLGGQCPLS*SCPIWP
Trigger: GGGCCAGATGGGGCAGCTCCATGACAATGGGCACTG...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGHRQLN*RVKSTW
Trigger: CCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTG...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR TCA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPNAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR TCA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp TCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: SKIRLELLDKPKLGQTRSGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...GCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCAGACACAGAGTGACTaGGCCAATCAACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGQTQSD*ANQQAC
Trigger: ACATGCCTGTTGATTGGCTCAGTCACTCTGTGTCTG...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTCATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCCATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp TCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTGGAGGCGGGCAGATCATaGGATCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: SSVPRKRVAFSALGNKWLEAGRS*DQEIET
Trigger: GGTCTCGATCTCCTGATCTCATGATCTGCCCGCCTC...CAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR TCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCAAGGGTCTGGATGTCCTaGAGAAGCCAGTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSRVWMS*RSQCPL
Trigger: CAATGGGCACTGGCTTCTTCAGGACATCCAGACCCT...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTGGAACAAATGGTTGCTaGTCCAGATCTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTGTNGC*SRSPQA
Trigger: TGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCC...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp AGGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTTGCACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: RHSRDQKQLLVRLSQTSCTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...GCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR GCA 90 bp AGGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTTGCATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: RHSRDQKQLLVRLSQTSCIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...GCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR GCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGGATGAGGGACCCAACTaGCAGAAGCAGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWDEGPN*QKQTQG
Trigger: GCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATC...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp GGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATTTGATCCCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GILCPRQACSSVQLEHLIPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...GATCAAATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000498469.5
CDS-3UTR GCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCATCACCCATGCTGGAGTaGAGTGGTACGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSSPMLE*SGTILA
Trigger: GGCCAAGATCGTACCACTGCACTCCAGCATGGGTGA...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLFRDPQ*SPLSSP
Trigger: GGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAA...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGSLSLH*GTNGCC
Trigger: GCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGA...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp TGGTCAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTGACAATCCAAGATCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: WSASQVAGSVERRLTIQDLWMSS*RPKSAE
Trigger: TTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAG...ATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCCATGGCTCCACTTGCTaGTGTCCTACTAAATATGAC +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSHGSTC*CPTKYD
Trigger: GTCATATTTAGTAGGACACCAGCAAGTGGAGCCATG...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCTTGTCAGTTCAGGCTTaGAGGGTAGAAGACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVLSVQA*RVEDQA
Trigger: AGCCTGGTCTTCTACCCTCCAAGCCTGAACTGACAA...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp CCTATGATCCCTCCAACGTCGTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: PMIPPTSYQMDS*SASASFQPKLL
Trigger: TAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAGGGATCATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp CCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACACAGGGCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: PKTTPRPAFPNQ*PITATTQGQPV
Trigger: CACTGGTTGGCCCTGTGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR TCA 90 bp GGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTTGCCAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: GTPETKNNSSSGFPKPVANAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...GGCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR TCA 90 bp GGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATTTGATCCACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: GILCPRQACSSVQLEHLIHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...GATCAAATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp CTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: LEDPKFPDNKSGMECFGCGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...ACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKAREGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCAGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCGGAGTGCTTCGGCTGTaGGTTACACGTCGGAATGTT +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPGVLRL*VTRRNV
Trigger: AACATTCCGACGTGTAACTCACAGCCGAAGCACTCC...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCGTTGTCATTTGCCTTTaGAGTTTCAGCTTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSVVICL*SFSFGE
Trigger: TTCCCCAAAGCTGAAACTTCAAAGGCAAATGACAAC...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTAGGAGTTGGAGAAGCTaGAGGAGGATCAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPRSWRS*RRIRGR
Trigger: CCTTCCCCTGATCCTCCTTCAGCTTCTCCAACTCCT...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp TCTGCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: SASIPERPISSGDTRSPKGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...CTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR GCA 90 bp CATACTGAAGAACAGAAGAAGCTAGGCACGCTCCCAAAATGTTGCCCACCGAAGGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: HTEEQKKLGTLPKCCPPKGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...CTTCGGTGGGCAACATTTTGGGAGCGTGCCTAGCTTCTTCTGTTCTTCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR GCA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGAACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: GDTRSPKKITIPPANCTDTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...GTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR GCA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCTTCAAAGTTTTCTTCTaGCTCAATACCCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSFKVFF*LNTRET
Trigger: GGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAA...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGTCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 4 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000492027.5
CDS-3UTR GCA 90 bp CTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LEDPKFPDNKSGMECFGCCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...ACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGCCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000498469.5
CDS-3UTR GCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCATTCTATTGGGCCAGCTaGTTCAGGGTGGTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSFYWAS*FRVVGN
Trigger: GTTTCCCACCACCCTGAAGCAGCTGGCCCAATAGAA...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAGTAGAGCCGGGGTTTTaGCCTGTTGGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKVEPGF*PVGQAG
Trigger: ACCAGCCTGGCCAACAGGGCAAAACCCCGGCTCTAC...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIIFRDPQ*SPLSSP
Trigger: GGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAA...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCGCACTGGGGAACAAATaGTTGCTGCTCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPALGNK*LLLQIS
Trigger: GGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGC...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp CTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGATGTGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLDKPKLGQTRSPSGPDVSLSLH*GTNGCC
Trigger: GCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGA...CACATCAGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAACACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp AAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KPRVALPPVHSIFKARESHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...ACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCCTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 4 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSLIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTATTAGGGCCTCAGTATaGGCTGTGATCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTIRASV*AVICCQ
Trigger: CTGACAACAGATCACAGCCCATACTGAGGCCCTAAT...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTATTCCATTGTTCTATTaGGCCAGCTGCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTIPLFY*ASCFRV
Trigger: CACCCTGAAGCAGCTGGCCCAATAGAACAATGGAAT...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp AATTCCTGTGACAGTGGCCAAAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACCCAAGTCCGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: NSCDSGQSFTAP*DELLATQVRRN
Trigger: ATTTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCTTTGGCCACTGTCACAGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp CAGGCTTGGAGGGTAGAAGACCAGGCTACTAAGCCCTaGCATCCCTTCTATTGCTGCTGCTATGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: QAWRVEDQATKP*HPFYCCCYVPF
Trigger: AAAGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTTCTACCCTCCAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCAAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSNAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACGCCAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: DTRSPKKITIPPANCTDANAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...GGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR TCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTCCAGTGAGTACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPPVSTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTACTCACTGG...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp AAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCCAGACACAGAGTGACTaGGCCAATCAACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: KIRLELLDKPKLGQTRSPQTQSD*ANQQAC
Trigger: ACATGCCTGTTGATTGGCTCAGTCACTCTGTGTCTG...GGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGAACGACTATACCCGATaGGGGACCCAACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWNDYTR*GTQLPE
Trigger: TTCTGGCAGTTGGGTCCCTCATCGGGTATAGTCGTT...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000498469.5
CDS-3UTR TCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGAACGACTATACCCGATaGGGGACCCAACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLNDYTR*GTQLPE
Trigger: TTCTGGCAGTTGGGTCCCTCATCGGGTATAGTCGTT...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000498469.5
CDS-3UTR TCA 90 bp TGGTCAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTGACAATCCAAGATCATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: WSASQVAGSVERRLTIQDHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...ATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGTGGAACCGAGCAGCATaGACTGGAACCTGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HIRASVWAVICCQFRLGGWNRAA*TGTCVS
Trigger: ACTGACACAGGTTCCAGTTCATGCTGCTCGGTTCCA...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTACACTAAATACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGTLNTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTATTTAGTGT...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492027.5
CDS-3UTR GCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCAGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSALGVH*SEILTL
Trigger: CAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGC...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATGGAACAAATGGTTGCTaGTCCAGATCTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: NRGILCPRQACSSVQLEHGTNGC*SRSPQA
Trigger: TGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCC...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GCTGGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCAATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: AGYNVDRTQTAVLFSFHSIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...TGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR GCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCATCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAATGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000498469.5
CDS-3UTR GCA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAATGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000498469.5
CDS-3UTR GCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACTCAGCTTGGCTCCGCTaGCCGCCTCCCCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNSAWLR*PPPPPP
Trigger: TGGCGGCGGGGGAGGCGGGCAGCGGAGCCAAGCTGA...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAGATGAGGGACCCAACTaGCAGAAGCAGACTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSDEGPN*QKQTQG
Trigger: GCCCTGAGTCTGCTTCTGGCAGTTGGGTCCCTCATC...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACTTGTCTGGCCCACTaGAGCTCCAATGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QRSKMLAESEVTRHIHETTCLAH*SSNAPR
Trigger: TCGGGGAGCATTGGAGCTGCAGTGGGCCAGACAAGT...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469636.1
CDS-3UTR CCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSFRDPQ*SPLSSP
Trigger: GGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAA...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCATCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSSLSLH*GTNGCC
Trigger: GCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGA...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKAREGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPDSAQL*AILSVL
Trigger: CAGAACACTTAGAATTGCCCACAGTTGGGCAGAATC...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAACAAGAGGGCCAGGTGTaGTGGCTCGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKQEGQV*WLALWK
Trigger: CTTCCAAAGTGCGAGCCACCACACCTGGCCCTCTTG...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp AGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTGCTGAGCAGAGACCCTCTTTaGAAAACATTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SVPRKRVAFSALGNKWLLSRDPL*KTFGQA
Trigger: GGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCT...CAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR TCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTAGCAGAGACCCTCTTTaGAAAACATTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPSRDPL*KTFGQA
Trigger: GGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCT...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATA +
Preference number: 4 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRAKCFS*SMEQRI
Trigger: TATTCGTTGCTCCATGCTTCACGAAAAACATTTAGC...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: GDTRSPKKITIPPANCTDNAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...GTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTCCAGTGAGTACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCPVSTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTACTCACTGG...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTCACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
CDS-3UTR TCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTTCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGCAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGACAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp GTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCAGCTTCTAGGGCTGAATaGCGTTTAGATCAGACACAG +
Preference number: 4 (lower is better)
Translates to: VEHTTNTNHAWLCLLFTPASRAE*RLDQTQ
Trigger: CTGTGTCTGATCTAAACGTCATTCAGCCCTAGAAGC...TGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGGAGTGCTTCGGCTGTaGGTTACACGTCGGAATGTT +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPGVLRL*VTRRNV
Trigger: AACATTCCGACGTGTAACTCACAGCCGAAGCACTCC...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAGCAAAGTTCCACCTATaGTCCCTCCAACGTCGTACC +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSAKFHL*SLQRRT
Trigger: GGTACGACGTTGGAGGGATCATAGGTGGAACTTTGC...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTGCAAAGTTCCACCTATaGTCCCTCCAACGTCGTACC +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCAKFHL*SLQRRT
Trigger: GGTACGACGTTGGAGGGATCATAGGTGGAACTTTGC...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR TCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGCATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000498469.5
CDS-3UTR GCA 90 bp ATTTCTTCTGGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: ISSGDTRSPKKITIPPANGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...GTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACCAGAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR GCA 90 bp AAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: KPRVALPPVHSIFKARESTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...ACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: GTYHQHKPRVALPPVHSINHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAACGATCTTGGCCCACTaGAACCTCCATCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSTILAH*NLHLLG
Trigger: ACCCAGGAGATGGAGGTTGCAGTGGGCCAAGATCGT...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCACAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSLWMSS*RPKSAE
Trigger: TTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCAAGAGACACTAAATACTaGCCCACTGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSRDTKY*PTAAPM
Trigger: CATTGGAGCTGCAGTGGGCCAGTATTTAGTGTCTCT...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGAGCAGAGACCCTCTTTaGAAAACATTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTSRDPL*KTFGQA
Trigger: GGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCT...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTAGCAGAGACCCTCTTTaGAAAACATTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCSRDPL*KTFGQA
Trigger: GGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCT...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACACACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTHRQLN*RVKSTW
Trigger: CCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTG...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR TCA 90 bp AGGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTTGCACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: RHSRDQKQLLVRLSQTSCTNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGT...GCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR TCA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGATGTGTCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLDKPKLGQTRSPSGPDVSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...CACATCAGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGCAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTAGATCAGACACAGAGTaGCTGAGCCAATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVRSDTE*LSQSTG
Trigger: GCCTGTTGATTGGCTCAGTCACTCTGTGTCTGATCT...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGAGATCAGACACAGAGTaGCTGAGCCAATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTRSDTE*LSQSTG
Trigger: GCCTGTTGATTGGCTCAGTCACTCTGTGTCTGATCT...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAAACGACTATACCCGATaGGGGACCCAACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKNDYTR*GTQLPE
Trigger: TTCTGGCAGTTGGGTCCCTCATCGGGTATAGTCGTT...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000498469.5
CDS-3UTR TCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTCATCCACAATTCCTGTaGCAGTGGCCAAAGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPHPQFL*QWPKLH
Trigger: GTGAAGCTTTGGCCACTGTCACAGGAATTGTGGATG...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000498469.5
CDS-3UTR TCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCCCACTTAATTTGCTATaGAATGACTTCCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVPLNLL*NDFLGQ
Trigger: CTGACCAAGGAAGTCATTTCATAGCAAATTAAGTGG...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTCACTCCCTCAATATGTaGGCCTGTCTCCATGAGAAT +
Preference number: 4 (lower is better)
Translates to: GTYHQHKPRVALPPVHSIHSLNM*ACLHEN
Trigger: ATTCTCATGGAGACAGGCTCACATATTGAGGGAGTG...AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498469.5
CDS-3UTR GCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVALGVH*SEILTL
Trigger: CAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGC...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTALGVH*SEILTL
Trigger: CAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGC...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR GCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGGAACAAATGGTTGCTaGTCCAGATCTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPGTNGC*SRSPQA
Trigger: TGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCC...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: NRGILCPRQACSSVQLEHMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR GCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIICPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000498469.5
CDS-3UTR GCA 90 bp TCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCGTAACTCCAGGAAGCTaGTTGTGCCAGAGATCAATC +
Preference number: 4 (lower is better)
Translates to: SKIRLELLDKPKLGQTRSVTPGS*LCQRSI
Trigger: GATTGATCTCTGGCACAAGCAGCTTCCTGGAGTTAC...GCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000498469.5
CDS-3UTR GCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGGGACAGCCTGTAACCTaGAAGCACAAGCTGGAACCG +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLGQPVT*KHKLEP
Trigger: CGGTTCCAGCTTGTGCTTGCAGGTTACAGGCTGTCC...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp GGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGCGTGTTAAAAGCACTTaGGGTCCACTGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GIQCAEEKSRFLCTGEQMRVKST*GPLLRD
Trigger: ATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACG...CATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAGCACTGGGGAACAAATaGTTGCTGCTCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKALGNK*LLLQIS
Trigger: GGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGC...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACATCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTSLSLH*GTNGCC
Trigger: GCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGA...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR CCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp GTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCAGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VEHTTNTNHAWLCLLFTPDSAQL*AILSVL
Trigger: CAGAACACTTAGAATTGCCCACAGTTGGGCAGAATC...TGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp GCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGAAGACCAGAAAGGCATACTaGAGGAGAGGGGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ASIPERPISSGDTRSPKKTRKAY*RRGVKG
Trigger: ACCTTTCACCCCTCTCCTCCAGTATGCCTTTCTGGT...CTTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR CCA 90 bp ATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTGCACTGGGGAACAAATaGTTGCTGCTCCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: IQCAEEKSRFLCTGEQMVALGNK*LLLQIC
Trigger: ACAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGC...AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
3UTR CAA 72 bp GTAGCTGGTCCTGTGAATCTTCAAAAGCTCATTCCATaGTTCTATTGGGCCAGCTGCTTCAGGGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VAGPVNLQKLIP*FYWASCFRVVG
Trigger: TCCCACCACCCTGAAGCAGCTGGCCCAATAGAACAATGGAATGAGCTTTTGAAGATTCACAGGACCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAACACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKHRQLN*RVKSTW
Trigger: CCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTG...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAACACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000492027.5
CDS-3UTR TCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR TCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCAGACACAGAGTGACTaGGCCAATCAACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSQTQSD*ANQQAC
Trigger: ACATGCCTGTTGATTGGCTCAGTCACTCTGTGTCTG...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAGCTTCTAGGGCTGAATaGCGTTTAGATCAGACACAG +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKAREASRAE*RLDQTQ
Trigger: CTGTGTCTGATCTAAACGTCATTCAGCCCTAGAAGC...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGAGTTTGTGTTAGATaGTTCTGCCCAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKARERVCVR*FCPTVG
Trigger: GCCCACAGTTGGGCAGAATCATCTAACACAAACTCT...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGACAGTCCTCAGCTTCTaGTTTTTGGACTTTACAATG +
Preference number: 4 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQTVLSF*FLDFTM
Trigger: CATTGTAAAGTCCAAAAATCAGAAGCTGAGGACTGT...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAATCGACTATACCCGATaGGGGACCCAACTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQIDYTR*GTQLPE
Trigger: TTCTGGCAGTTGGGTCCCTCATCGGGTATAGTCGAT...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447932.6
CDS-3UTR TCA 90 bp GGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCACTAACTGGAGGAGAGGGGTaGAAGGTGGTCCTTACATAT +
Preference number: 4 (lower is better)
Translates to: GYNVDRTQTAVLFSFHSLTGGEG*KVVLTY
Trigger: ATATGTAAGGACCACCTTTCACCCCTCTCCTCCAGT...TAGTGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR GCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: QRSKMLAESEVTRHIHETALGVH*SEILTL
Trigger: CAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGC...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTT +
Preference number: 4 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPKSRFL*TGEQMV
Trigger: AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTT...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR GCA 90 bp TCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTGAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: SSVPRKRVAFSALGNKWLKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...CAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR GCA 90 bp GGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: GDTRSPKKITIPPANCTDKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...GTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR GCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATC +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSGQPVD*SRPFTI
Trigger: GATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCC...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TCAAAGTTTTCTTCTGCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: SKFSSASIPERPISSGDTTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...GGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR GCA 90 bp CAAAGTTTTCTTCTGCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: QSFLLPQYPRDQFLLVTPIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...TGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR GCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: QRSKMLAESEVTRHIHETNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTGAGTTACACGGTAACTCCAGGAAGCTaGTTGTGCCAGAGATCAATC +
Preference number: 4 (lower is better)
Translates to: LSSQTTNLGWSASAVSYTVTPGS*LCQRSI
Trigger: GATTGATCTCTGGCACAAGCAGCTTCCTGGAGTTAC...CGTGTAACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAGGAACAAATGGTTGCTaGTCCAGATCTGTAATCCCC +
Preference number: 4 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTGTNGC*SRSVIP
Trigger: GGGGATTACAGATCTGGAGCAGCAACCATTTGTTCC...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR GCA 90 bp TCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTGTGGGGAACAAATGGTTaGTGCTCCAGATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SSVPRKRVAFSALGNKWLWGTNG*CSRSVI
Trigger: GATTACAGATCTGGAGCAGCAACCATTTGTTCCCCA...CAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR GCA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGCCCTTCTATTGCTGCTaGTATGTCCCCTTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: HIRASVWAVICCQFRLGGPFYCC*YVPFVC
Trigger: ACAAACAAAGGGGACATAGCAGCAGCAATAGAAGGG...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGCAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIIGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATGCATTTGACTTCCAATaGGTTTACTGGGACATAACC +
Preference number: 4 (lower is better)
Translates to: NRGILCPRQACSSVQLEHAFDFQ*VYWDIT
Trigger: GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGC...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIILWMSS*RPKSAE
Trigger: TTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAG...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000485538.1
ENST00000498469.5
CDS-3UTR CCA 90 bp GGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCACTAACCAGAAAGGCATACTaGAGGAGAGGGGTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: GYNVDRTQTAVLFSFHSLTRKAY*RRGVKG
Trigger: ACCTTTCACCCCTCTCCTCCAGTATGCCTTTCTGGT...TAGTGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR CCA 90 bp ACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTACTCACTGGCAGAAGTATTGTaGGTAGGGAAGGAAAATTCA +
Preference number: 4 (lower is better)
Translates to: TKWTACRLPPPSSRSCYSLAEVL*VGKENS
Trigger: TGAATTTTCCTTCCCTACCCACAATACTTCTGCCAG...TGAGTAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp TGTGGAACATACCACCAACACAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: CGTYHQHKPRVA*PPVHSIFKARE
Trigger: TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
3UTR CAA 72 bp TCCTGTGAATCTTCAAAAGCTCATTCCATTGTTCTATaGGGCCAGCTGCTTCAGGGTGGTGGGAAACACGGT +
Preference number: 4 (lower is better)
Translates to: SCESSKAHSIVL*GQLLQGGGKHG
Trigger: ACCGTGTTTCCCACCACCCTGAAGCAGCTGGCCCAATAGAACAATGGAATGAGCTTTTGAAGATTCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACCACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDHRQLN*RVKSTW
Trigger: CCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTG...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQNAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000492027.5
CDS-3UTR TCA 90 bp AGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAAGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RCWQSQKSLGTFMKQQQKVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...TTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR TCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGTTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGATCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATGTACCTTATGGTCCTTaGAAGGAAGACTCAATACTT +
Preference number: 4 (lower is better)
Translates to: NRGILCPRQACSSVQLEHVPYGP*KEDSIL
Trigger: AAGTATTGAGTCTTCCTTTCAAGGACCATAAGGTAC...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGGGTATTAAATGCATTTaGCTTCCAATGGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQGIKCI*LPMGLL
Trigger: CAGTAAACCCATTGGAAGTCAAATGCATTTAATACC...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGGACTTTACAATGGTGTaGAATGGTTGCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQDFTMV*NGCNFN
Trigger: GTTGAAATTGCAACCATTTCACACCATTGTAAAGTC...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTTCATCAGAAGGGCATTaGTGGACTTATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPSSEGH*WTYHLE
Trigger: CTCCAAATGATAAGTCCATCAATGCCCTTCTGATGA...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GCTGGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCATCCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AGYNVDRTQTAVLFSFHSSNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGA...TGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR GCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCAAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTT +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSKSRFL*TGEQMV
Trigger: AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTT...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTT +
Preference number: 4 (lower is better)
Translates to: WYPVCRGKESLSLHWGTNKSRFL*TGEQMV
Trigger: AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTT...ATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR GCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKAREKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GCTGGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCAATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: AGYNVDRTQTAVLFSFHSMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...TGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR GCA 90 bp TCTGCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: SASIPERPISSGDTRSPKMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...CTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR GCA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGATTCAAAGTTTTCTTCTaGCTCAATACCCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRFKVFF*LNTRET
Trigger: GGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAA...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR GCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTGTAACTCCAGGAAGCTaGTTGTGCCAGAGATCAATC +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSVTPGS*LCQRSI
Trigger: GATTGATCTCTGGCACAAGCAGCTTCCTGGAGTTAC...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGTCAGAGATGAAGCCTTaGAAAGTTCCACCTATGATC +
Preference number: 4 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWSEMKP*KVPPMI
Trigger: GATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGA...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCCTGATCCACTTAATTTaGTATGAAATGACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVLIHLI*YEMTSL
Trigger: CAAGGAAGTCATTTCATAGCAAATTAAGTGGATCAG...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGCGTGTTAAAAGCACTTaGGGTCCACTGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLRVKST*GPLLRD
Trigger: ATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACG...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCGCACTGGGGAACAAATaGTTGCTGCTCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIIALGNK*LLLQIS
Trigger: GGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGC...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CCA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: AACARDQSSKNRLSRLASGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp TGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: WQSQKSLGTFMKQQQKSSGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TGATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTACAACAAATCTGGGATaGAGTGCTTCGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSTTNLG*SASAVS
Trigger: ACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGT...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCCCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: MLAESEVTRHIHETTAKIPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGGCATTTGACTTCCAATaGGTTTACTGGGACATAACC +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLAFDFQ*VYWDIT
Trigger: GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGC...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp GGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTGCATTTGACTTCCAATaGGTTTACTGGGACATAACC +
Preference number: 4 (lower is better)
Translates to: GTYHQHKPRVALPPVHSIAFDFQ*VYWDIT
Trigger: GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGC...AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAAGAGACACTAAATACTaGCCCACTGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQRDTKY*PTAAPM
Trigger: CATTGGAGCTGCAGTGGGCCAGTATTTAGTGTCTCT...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000498469.5
CDS-3UTR CCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAAGTTCACAGGGCAGGTaGTTAGGAGGGAAATGGATA +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKSSQGR*LGGKWI
Trigger: TATCCATTTCCCTCCTAACCACCTGCCCTGTGAACT...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCAAGCAGAGACCCTCTTTaGAAAACATTTGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSSRDPL*KTFGQA
Trigger: GGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCT...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSHRQLN*RVKSTW
Trigger: CCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTG...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCCCAGTGAGTACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSPVSTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTACTCACTGG...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp CTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACCCAGTGAGTACGGTATaGCTCCAGGAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: LCLLFTPFSRLEKVQVQNPVSTV*LQEGNM
Trigger: CATGTTGCCTTCCTGGAGTCATACCGTACTCACTGG...GTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp CTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTTTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: LEDPKFPDNKSGMECFGCLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...ACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACGCTTCTAGGGCTGAATaGCGTTTAGATCAGACACAG +
Preference number: 4 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDASRAE*RLDQTQ
Trigger: CTGTGTCTGATCTAAACGTCATTCAGCCCTAGAAGC...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCGGAGTGCTTCGGCTGTaGGTTACACGTCGGAATGTT +
Preference number: 4 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITGVLRL*VTRRNV
Trigger: AACATTCCGACGTGTAACTCACAGCCGAAGCACTCC...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp GGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATTTGATCGGTATTAAATGCATTTaGCTTCCAATGGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: GILCPRQACSSVQLEHLIGIKCI*LPMGLL
Trigger: CAGTAAACCCATTGGAAGTCAAATGCATTTAATACC...GATCAAATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp ACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTAGTACATCAGAGATaGAGCCTTGCAAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: TNHAWLCLLFTPFSRLEKVVHQR*SLAKFH
Trigger: GTGGAACTTTGCAAGGCTTCATCTCTGATGTACTAC...TTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR TCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAGTAGTACATCAGAGATaGAGCCTTGCAAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSVVHQR*SLAKFH
Trigger: GTGGAACTTTGCAAGGCTTCATCTCTGATGTACTAC...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTTCATCAGAAGGGCATTaGTGGACTTATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: LEDPKFPDNKSGMECFGCSSEGH*WTYHLE
Trigger: CTCCAAATGATAAGTCCATCAATGCCCTTCTGATGA...ACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326232.14
CDS-3UTR GCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCGGAACAAATGGTTGCTaGTCCAGATCTCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIIGTNGC*SRSPQA
Trigger: TGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCC...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSKSRFL*TGEQMV
Trigger: AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTT...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAGTAACTCCAGGAAGCTaGTTGTGCCAGAGATCAATC +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQVTPGS*LCQRSI
Trigger: GATTGATCTCTGGCACAAGCAGCTTCCTGGAGTTAC...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACACCACTGCAGCTCCAATaGTCCCCGAACCATCCACAA +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTPLQLQ*SPNHPQ
Trigger: TTGTGGATGGTTCGGGGAGCATTGGAGCTGCAGTGG...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAATTGCATCCCTTCTATTaGTGCTGCTATGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKLHPFY*CCYVPF
Trigger: AAAGGGGACATAGCAGCAGCAATAGAAGGGATGCAA...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGCGTGTTAAAAGCACTTaGGGTCCACTGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLRVKST*GPLLRD
Trigger: ATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACG...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp TCATATTCGTCTTCATTTTCACCACCATTAATTAATGGCCTGTGTGAGTCTTCTCACAGGGCCAACCAGTaGACTGCAGCAGGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SYSSSFSPPLINGLCESSHRANQ*TAAGRS
Trigger: TGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTG...AGAAGACTCACACAGGCCATTAATTAATGGTGGTGAAAATGAAGACGAATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR CCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVLIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACCAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIINTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: EAACARDQSSKNRLSRLALWMSS*RPKSAE
Trigger: TTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAG...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGTTTAGCAGTCTTGCCTaGATTGGGTTGTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: HIRASVWAVICCQFRLGGFSSLA*IGLLSF
Trigger: AAATGACAACAACCCAATCCAGGCAAGACTGCTAAA...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATA +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCAKCFS*SMEQRI
Trigger: TATTCGTTGCTCCATGCTTCACGAAAAACATTTAGC...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATA +
Preference number: 4 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTAKCFS*SMEQRI
Trigger: TATTCGTTGCTCCATGCTTCACGAAAAACATTTAGC...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR TCA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDTNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGT...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACGGTGGCTGGCAGTGTTaGGAGACGCCTGACAATCCA +
Preference number: 4 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDGGWQC*ETPDNP
Trigger: TGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACC...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCACACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR TCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAATTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCCAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: AACARDQSSKNRLSRLASQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCCAGACACAGAGTGACTaGGCCAATCAACAGGCATGT +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSQTQSD*ANQQAC
Trigger: ACATGCCTGTTGATTGGCTCAGTCACTCTGTGTCTG...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAGCTTCTAGGGCTGAATaGCGTTTAGATCAGACACAG +
Preference number: 4 (lower is better)
Translates to: KMLAESEVTRHIHETTAKASRAE*RLDQTQ
Trigger: CTGTGTCTGATCTAAACGTCATTCAGCCCTAGAAGC...TTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTGTGTGAGTCTTCTTCAAAGTTTTCTTCTGCCTCAATACCCGAGAGACCAATTACTGGAGGAGAGGGGTaGAAGGTGGTCCTTACATAT +
Preference number: 4 (lower is better)
Translates to: LCESSSKFSSASIPERPITGGEG*KVVLTY
Trigger: ATATGTAAGGACCACCTTTCACCCCTCTCCTCCAGT...AATTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAAGAAGACTCACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR TCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTACACTCCCTCAATATGTaGGCCTGTCTCCTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLHSLNM*ACLLAH
Trigger: GTGGGCCAGGAGACAGGCTCACATATTGAGGGAGTG...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485538.1
CDS-3UTR GCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTG +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNALGVH*SEILTL
Trigger: CAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGC...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCATCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 4 (lower is better)
Translates to: WQSQKSLGTFMKQQQKSSSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...TGATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000492027.5
CDS-3UTR GCA 90 bp AAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAGTCAGAGGTCAAAGATaGTGGCAGAGTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KMLAESEVTRHIHETTAKVRGQR*WQSQKS
Trigger: TGACTTCTGACTCTGCCAGCATCTTTGACCTCTGAC...TTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR GCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACTGTCCAAGGCAGGCTTaGAGCTCGGTCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDCPRQA*SSVQLE
Trigger: CTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACA...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000498469.5
CDS-3UTR GCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTTATCCCCTAACCGAATaGAAATTAGGTATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPYPLTE*KLGIPQ
Trigger: TTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTATCCCCTAACCGAATaGAAATTAGGTATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCYPLTE*KLGIPQ
Trigger: TTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGTATCCCCTAACCGAATaGAAATTAGGTATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKYPLTE*KLGIPQ
Trigger: TTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGCATCCCTTCTATTGCTaGTGCTATGTCCCCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLHPFYC*CYVPFV
Trigger: AACAAAGGGGACATAGCAGCAGCAATAGAAGGGATG...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: PPVHSIFKARESSSPKQQNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...CTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCAGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: SSICGTYHQHKPRVALPPDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp AAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAACAACAAATCTGGGATaGAGTGCTTCGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: KMLAESEVTRHIHETTAKTTNLG*SASAVS
Trigger: ACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGT...TTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACAACAAATCTGGGATaGAGTGCTTCGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: MLAESEVTRHIHETTAKITTNLG*SASAVS
Trigger: ACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGT...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQDSAQL*AILSVL
Trigger: CAGAACACTTAGAATTGCCCACAGTTGGGCAGAATC...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
3UTR CAA 72 bp ATTGGGTTGTTGTCATTTGCCTTTGAAGTTTCAGCTTaGGGGAAAATGAAGCTGCAGCATGGCTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: IGLLSFAFEVSA*GKMKLQHGSTC
Trigger: GCAAGTGGAGCCATGCTGCAGCTTCATTTTCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACAACCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTACACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACG +
Preference number: 4 (lower is better)
Translates to: PVHSIFKARESSSPKQQLHSLNM*ACLLST
Trigger: CGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTG...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
CDS-3UTR TCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAATTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTCAGCTCGGTCCAGCTTaGGCATTTGATCAGGATTTG +
Preference number: 4 (lower is better)
Translates to: EAACARDQSSKNRLSRLAQLGPA*AFDQDL
Trigger: CAAATCCTGATCAAATGCTCAAGCTGGACCGAGCTG...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAGTACCTTATGGTCCTTaGAAGGAAGACTCAATACTT +
Preference number: 4 (lower is better)
Translates to: QRSKMLAESEVTRHIHETVPYGP*KEDSIL
Trigger: AAGTATTGAGTCTTCCTTTCAAGGACCATAAGGTAC...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAAGAGCATCTGTACTTaGCACTTACTAGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HKPRVALPPVHSIFKAREKSICT*HLLEEK
Trigger: CTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTT...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCAAGAGTTTGTGTTAGATaGTTCTGCCCAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WQSQKSLGTFMKQQQKSSRVCVR*FCPTVG
Trigger: GCCCACAGTTGGGCAGAATCATCTAACACAAACTCT...TGATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGAGTTTGTGTTAGATaGTTCTGCCCAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNRVCVR*FCPTVG
Trigger: GCCCACAGTTGGGCAGAATCATCTAACACAAACTCT...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAGACTTTACAATGGTGTaGAATGGTTGCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSDFTMV*NGCNFN
Trigger: GTTGAAATTGCAACCATTTCACACCATTGTAAAGTC...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTGACTTTACAATGGTGTaGAATGGTTGCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: SICGTYHQHKPRVALPPVDFTMV*NGCNFN
Trigger: GTTGAAATTGCAACCATTTCACACCATTGTAAAGTC...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAACAGTCCTCAGCTTCTaGTTTTTGGACTTTACAATG +
Preference number: 4 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQTVLSF*FLDFTM
Trigger: CATTGTAAAGTCCAAAAATCAGAAGCTGAGGACTGT...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCAGTAGTACATCAGAGATaGAGCCTTGCAAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSVVHQR*SLAKFH
Trigger: GTGGAACTTTGCAAGGCTTCATCTCTGATGTACTAC...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR GCA 90 bp AGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAAAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTT +
Preference number: 4 (lower is better)
Translates to: RCWQSQKSLGTFMKQQQKKSRFL*TGEQMV
Trigger: AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTT...TTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: MLAESEVTRHIHETTAKIMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAACGCTCCCAAAATGTTaGCCACCGAAGCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLTLPKC*PPKHRH
Trigger: GTGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGT...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTATCCCACCAGCAAACTaGACAGACGCCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSIPPAN*TDAVTR
Trigger: TCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCCGTGTTAAAAGCACTTaGGGTCCACTGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: AACARDQSSKNRLSRLASRVKST*GPLLRD
Trigger: ATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACG...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACATCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTSLSLH*GTNGCC
Trigger: GCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGA...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 4 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQLIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000492027.5
CDS-3UTR CCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAGGTCAGCATCTCAGGTaGCTGGCAGTGTTGAGAGAC +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLGQHLR*LAVLRD
Trigger: GTCTCTCAACACTGCCAGCCACCTGAGATGCTGACC...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: QRSKMLAESEVTRHIHETDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp AGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAAGATTCTGCCCAACTGTaGGCAATTCTAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RCWQSQKSLGTFMKQQQKDSAQL*AILSVL
Trigger: CAGAACACTTAGAATTGCCCACAGTTGGGCAGAATC...TTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAGATGGACTTATCATTTaGAGAACGACTATACCCGAT +
Preference number: 4 (lower is better)
Translates to: GVVILIGMVDGSWSCESSDGLII*RTTIPD
Trigger: ATCGGGTATAGTCGTTCTCCAAATGATAAGTCCATC...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CCA 90 bp CGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTGATGGACTTATCATTTaGAGAACGACTATACCCGAT +
Preference number: 4 (lower is better)
Translates to: RVALPPVHSIFKARESSSDGLII*RTTIPD
Trigger: ATCGGGTATAGTCGTTCTCCAAATGATAAGTCCATC...ACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000498469.5
CDS-3UTR CCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACCTTTGGATGAGCTCCTaGCGACCCAAGTCCGCAGAA +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNLWMSS*RPKSAE
Trigger: TTCTGCGGACTTGGGTCGCCAGGAGCTCATCCAAAG...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000485538.1
ENST00000498469.5
CDS-3UTR CCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGAGACACTAAATACTaGCCCACTGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNRDTKY*PTAAPM
Trigger: CATTGGAGCTGCAGTGGGCCAGTATTTAGTGTCTCT...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000498469.5
CDS-3UTR CCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCATTGTACAACTTGTCTaGCCCACTGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSIVQLV*PTAAPM
Trigger: CATTGGAGCTGCAGTGGGCCAGACAAGTTGTACAAT...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469636.1
3UTR CAA 72 bp CTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATaGGGTTGTTGTCATTTGCCTTTGAAGTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LEGSKPLAVLPG*GCCHLPLKFQL
Trigger: AAGCTGAAACTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp ACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTaGCCTGGATTGGGTTGTTGTCATTTGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TFILEGSKPLAV*PGLGCCHLPLK
Trigger: CTTCAAAGGCAAATGACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
3UTR CAA 72 bp CCGCTGATCCACTTAATTTGCTATGAAATGACTTCCTaGGTCAGAAGTAATGCCATATGGCCTACCTTGACG +
Preference number: 4 (lower is better)
Translates to: PLIHLICYEMTS*VRSNAIWPTLT
Trigger: CGTCAAGGTAGGCCATATGGCATTACTTCTGACCAAGGAAGTCATTTCATAGCAAATTAAGTGGATCAGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: AACARDQSSKNRLSRLASTNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGT...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCAACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WQSQKSLGTFMKQQQKSSTNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGT...TGATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp CTGTGTGAGTCTTCTTCAAAGTTTTCTTCTGCCTCAATACCCGAGAGACCAATTACCAATTTCTTCTGGTaGCACCAGGAGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LCESSSKFSSASIPERPITNFFW*HQESKE
Trigger: TTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGT...AATTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAAGAAGACTCACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR TCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACGTGTTGAGAGACGCCTaGCAATCCAAGATCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNVLRDA*QSKIRL
Trigger: CAGCCTGATCTTGGATTGTCAGGCGTCTCTCAACAC...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAGGAGTGCTTCGGCTGTaGGTTACACGTCGGAATGTT +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLGVLRL*VTRRNV
Trigger: AACATTCCGACGTGTAACTCACAGCCGAAGCACTCC...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAAGAGTTTGTGTTAGATaGTTCTGCCCAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTRVCVR*FCPTVG
Trigger: GCCCACAGTTGGGCAGAATCATCTAACACAAACTCT...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGACTTTACAATGGTGTaGAATGGTTGCAATTTCAAC +
Preference number: 4 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQDFTMV*NGCNFN
Trigger: GTTGAAATTGCAACCATTTCACACCATTGTAAAGTC...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCTCATCAGAAGGGCATTaGTGGACTTATCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: MLAESEVTRHIHETTAKISSEGH*WTYHLE
Trigger: CTCCAAATGATAAGTCCATCAATGCCCTTCTGATGA...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000498469.5
CDS-3UTR GCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCTTCAAAGTTTTCTTCTaGCTCAATACCCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIIFKVFF*LNTRET
Trigger: GGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAA...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAATATCCCCTAACCGAATaGAAATTAGGTATCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQYPLTE*KLGIPQ
Trigger: TTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACGCACTGGGGAACAAATaGTTGCTGCTCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDALGNK*LLLQIS
Trigger: GGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGC...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCCTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 4 (lower is better)
Translates to: LAESEVTRHIHETTAKIILIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000492027.5
CDS-3UTR CCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTACAACGTCGTACCAAATaGACAGCTTGTCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLQRRTK*TACRLP
Trigger: CGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTG...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTACCCAGACAACAAATCTaGGATGGAGTGCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLPRQQI*DGVLRL
Trigger: CAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGG...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp ACCCAAACCTTCATTCTTGAAGGGTCTAAGCCTTTAGCAGTCTTGCCTGGATTGATGGTAGATGGTAGCTaGTCCTGTGAATCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TQTFILEGSKPLAVLPGLMVDGS*SCESSK
Trigger: TTTTGAAGATTCACAGGACCAGCTACCATCTACCAT...CAATCCAGGCAAGACTGCTAAAGGCTTAGACCCTTCAAGAATGAAGGTTTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR TCA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATA +
Preference number: 4 (lower is better)
Translates to: MLAESEVTRHIHETTAKIAKCFS*SMEQRI
Trigger: TATTCGTTGCTCCATGCTTCACGAAAAACATTTAGC...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAAACGCAGCCATTCTGTaGGCGCACCAAAGACAAACA +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLNAAIL*AHQRQT
Trigger: TGTTTGTCTTTGGTGCGCTCACAGAATGGCTGCGTT...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACACTCGGCACATTCATaGAACAACAGCAAAAATCAT +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSHSAHS*NNSKNH
Trigger: ATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTG...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGAGATCAGACACAGAGTaGCTGAGCCAATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWRSDTE*LSQSTG
Trigger: GCCTGTTGATTGGCTCAGTCACTCTGTGTCTGATCT...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTAGATCAGACACAGAGTaGCTGAGCCAATCAACAGGC +
Preference number: 4 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSRSDTE*LSQSTG
Trigger: GCCTGTTGATTGGCTCAGTCACTCTGTGTCTGATCT...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAGGTATTAAATGCATTTaGCTTCCAATGGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: QRCWQSQKSLGTFMKQQQGIKCI*LPMGLL
Trigger: CAGTAAACCCATTGGAAGTCAAATGCATTTAATACC...TTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp AAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAACAGTCCTCAGCTTCTaGTTTTTGGACTTTACAATG +
Preference number: 4 (lower is better)
Translates to: KMLAESEVTRHIHETTAKTVLSF*FLDFTM
Trigger: CATTGTAAAGTCCAAAAATCAGAAGCTGAGGACTGT...TTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCAACAGTCCTCAGCTTCTaGTTTTTGGACTTTACAATG +
Preference number: 4 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSTVLSF*FLDFTM
Trigger: CATTGTAAAGTCCAAAAATCAGAAGCTGAGGACTGT...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp TGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCATTCAAAGTTTTCTTCTaGCTCAATACCCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: WQSQKSLGTFMKQQQKSSFKVFF*LNTRET
Trigger: GGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAA...TGATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACTCCAGGAAGGCAACATaGCTGGTAGAAGCTTATCGC +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNSRKAT*LVEAYR
Trigger: GCGATAAGCTTCTACCAGGCATGTTGCCTTCCTGGA...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACAACCACGCGTGGCTTTaGCTCCTGTTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDNHAWL*LLFTPF
Trigger: AAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTT...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTACGTGTTAAAAGCACTTaGGGTCCACTGCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: PVHSIFKARESSSPKQQLRVKST*GPLLRD
Trigger: ATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACG...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCCTTATCGCCTTGACTTaGGCAACAGAACTATCATCT +
Preference number: 4 (lower is better)
Translates to: AACARDQSSKNRLSRLASLIALT*ATELSS
Trigger: AGATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAG...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAAACACAAACCACGCGTaGCTTTGCCTCCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLNTNHA*LCLLFT
Trigger: AGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTT...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAACAACAAATCTGGGATaGAGTGCTTCGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PVHSIFKARESSSPKQQLTTNLG*SASAVS
Trigger: ACTCACAGCCGAAGCACTCCATCCCAGATTTGTTGT...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp CTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACGCATTTGACTTCCAATaGGTTTACTGGGACATAACC +
Preference number: 4 (lower is better)
Translates to: LCLLFTPFSRLEKVQVQNAFDFQ*VYWDIT
Trigger: GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGC...GTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATA +
Preference number: 4 (lower is better)
Translates to: PPVHSIFKARESSSPKQQAKCFS*SMEQRI
Trigger: TATTCGTTGCTCCATGCTTCACGAAAAACATTTAGC...CTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR TCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCGTACCTTATGGTCCTTaGAAGGAAGACTCAATACTT +
Preference number: 4 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITVPYGP*KEDSIL
Trigger: AAGTATTGAGTCTTCCTTTCAAGGACCATAAGGTAC...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAATGCAGAAGAGCACATaGCAAAAGACAGAACCCATC +
Preference number: 4 (lower is better)
Translates to: PVHSIFKARESSSPKQQLMQKST*QKTEPI
Trigger: GATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCAT...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR GCA 90 bp TGTGTGAGTCTTCTTCAAAGTTTTCTTCTGCCTCAATACCCGAGAGACCAATTTTTCAAAGTTTTCTTCTaGCTCAATACCCGAGAGACC +
Preference number: 4 (lower is better)
Translates to: CVSLLQSFLLPQYPRDQFFKVFF*LNTRET
Trigger: GGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAA...AAATTGGTCTCTCGGGTATTGAGGCAGAAGAAAACTTTGAAGAAGACTCACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484416.5
CDS-3UTR CCA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CCA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAAGAGACACTAAATACTaGCCCACTGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: HSIFKARESSSPKQQLRLRDTKY*PTAAPM
Trigger: CATTGGAGCTGCAGTGGGCCAGTATTTAGTGTCTCT...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000498469.5
CDS-3UTR TCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAGTACCTTATGGTCCTTaGAAGGAAGACTCAATACTT +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTVPYGP*KEDSIL
Trigger: AAGTATTGAGTCTTCCTTTCAAGGACCATAAGGTAC...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAAGAGCATCTGTACTTaGCACTTACTAGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LCLLFTPFSRLEKVQVQNKSICT*HLLEEK
Trigger: CTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTT...GTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp CAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACATAACCAAGAGCATCTGTACTTaGCACTTACTAGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QSGVLNAFDFQWVYWDITKSICT*HLLEEK
Trigger: CTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTT...GGTTATGTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACGGTATTAAATGCATTTaGCTTCCAATGGGTTTACTG +
Preference number: 4 (lower is better)
Translates to: CLLFTPFSRLEKVQVQNNGIKCI*LPMGLL
Trigger: CAGTAAACCCATTGGAAGTCAAATGCATTTAATACC...GTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAATGGTATCCAGTGTaGCGAGGAAAAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNKWYPV*RGKESL
Trigger: AAGCGACTCTTTTCCTCGGCACACTGGATACCATTT...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAGATGGACTTATCATTTaGAGAACGACTATACCCGAT +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTDGLII*RTTIPD
Trigger: ATCGGGTATAGTCGTTCTCCAAATGATAAGTCCATC...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326232.14
CDS-3UTR TCA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGTTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR TCA 90 bp TCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACAAAGACTTGATGCTTCAAAGATaGCCCACTCTCTGTAAACTC +
Preference number: 4 (lower is better)
Translates to: SKTTVKVKTLNLNRPNKDLMLQR*PTLCKL
Trigger: GAGTTTACAGAGAGTGGGTCATCTTTGAAGCATCAA...GTCTTTGTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TTCAAGTCCAAAACAACAGTTAAGGTTAAAACGCTAAACCTCAATAGGCCAAACTCCAGCTTGAGCATTTaGTCAGGATTTGATGCTTCA +
Preference number: 4 (lower is better)
Translates to: FKSKTTVKVKTLNLNRPNSSLSI*SGFDAS
Trigger: TGAAGCATCAAATCCTGATCAAATGCTCAAGCTGGA...GTTTGGCCTATTGAGGTTTAGCGTTTTAACCTTAACTGTTGTTTTGGACTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR TCA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAAAGAGCATCTGTACTTaGCACTTACTAGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTKSICT*HLLEEK
Trigger: CTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTT...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR GCA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTTCAGAGATGAAGCCTTaGAAAGTTCCACCTATGATC +
Preference number: 4 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSSEMKP*KVPPMI
Trigger: GATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGA...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CCA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGGATCTCTTCCATTTGTaGAACATACCACCAACACAA +
Preference number: 4 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWDLFHL*NIPPTQ
Trigger: TTGTGTTGGTGGTATGTTCCACAAATGGAAGAGATC...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS GCA 90 bp GAGAGCGAGACAGGTAAGCGACAGGTGAACCAGGAAGGCGAAGGCTaGGGGATGCCGGCGGGAGGACATCATCGGGGTGGACGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: ESETGKRQVNQEGEG*GMPAGGHHRGGRCL
Trigger: CAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCAGCCTTCGCCTTCCTGGTTCACCTGTCGCTTACCTGTCTCGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS GCA 90 bp GAAGGCTGCGGGATGCCGGCGGGAGGACATCATCGGGGTGGACGCTaGCTGTGCCTCCCAGCAAGGCTTGTAGGCTCAATGAAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: EGCGMPAGGHHRGGR*LCLPARLVGSMKGG
Trigger: GCCCCCTTTCATTGAGCCTACAAGCCTTGCTGGGAGGCACAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCAGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 90 bp GGAAGGCGAAGGCTGCGGGATGCCGGCGGGAGGACATCATCGGGGTaGACGCTGCCTGTGCCTCCCAGCAAGGCTTGTAGGCTCAATGAA +
Preference number: 5 (lower is better)
Translates to: GRRRLRDAGGRTSSG*TLPVPPSKACRLNE
Trigger: TTCATTGAGCCTACAAGCCTTGCTGGGAGGCACAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCAGCCTTCGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS-3UTR CAA 90 bp GATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGGCTCGCCGGGTCAGCTaGGCTCCGCTGCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: DQAGAPRQTQIRADSKPQARRVS*APLPAS
Trigger: GGAGGCGGGCAGCGGAGCCAAGCTGACCCGGCGAGC...CTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS TCA 90 bp CTGCTGACCAGCAGAGGTGAGAGAGCGAGACAGGTAAGCGACAGGTaGACCAGGAAGGCGAAGGCTGCGGGATGCCGGCGGGAGGACATC +
Preference number: 5 (lower is better)
Translates to: LLTSRGERARQVSDR*TRKAKAAGCRREDI
Trigger: GATGTCCTCCCGCCGGCATCCCGCAGCCTTCGCCTTCCTGGTTCACCTGTCGCTTACCTGTCTCGCTCTCTCACCTCTGCTGGTCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS GCA 90 bp TGCGGGATGCCGGCGGGAGGACATCATCGGGGTGGACGCTGCCTGTaGCTCCCAGCAAGGCTTGTAGGCTCAATGAAAGGGGGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: CGMPAGGHHRGGRCL*LPARLVGSMKGGFS
Trigger: ACTAAAGCCCCCTTTCATTGAGCCTACAAGCCTTGCTGGGAGGCACAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS-3UTR CAA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGCGGGGTTTTGCCCTGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLRGFAL*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACAGGGCAAAACCCCG...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp TTGCCCACCGAAGCACAGGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: LPTEAQALQRPKTTPRPAHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...AGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCTGTGCTTCGGTGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR CAA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCAGCTCGCCGGGTCAGCTaGGCTCCGCTGCCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSARRVS*APLPAS
Trigger: GGAGGCGGGCAGCGGAGCCAAGCTGACCCGGCGAGC...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAATGGGCTGTGATCTGTaGTCAGTTCAGGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRMGCDL*SVQAWR
Trigger: CCTCCAAGCCTGAACTGACAACAGATCACAGCCCAT...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCCATTCCATTGTTCTATaGGGCCAGCTGCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSHSIVL*GQLLQG
Trigger: ACCCTGAAGCAGCTGGCCCAATAGAACAATGGAATG...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS GCA 90 bp AACCAGTTGCCCATAACAGCAACCACACAGGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATCCACAGGCAGCAGTACAGCCATTTG +
Preference number: 5 (lower is better)
Translates to: NQLPITATTQGQPVD*SRPFTIHRQQYSHL
Trigger: CAAATGGCTGTACTGCTGCCTGTGGATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTGTGGTTGCTGTTATGGGCAACTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000461089.5
ENST00000464834.5
ENST00000464865.5
ENST00000473707.5
ENST00000477571.5
ENST00000484416.5
ENST00000485861.5
ENST00000490760.5
CDS GCA 90 bp GGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTaGACAGACGCCGTCACCAGAAAGGCATACTGGAGGAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: GDTRSPKKITIPPAN*TDAVTRKAYWRRGV
Trigger: CACCCCTCTCCTCCAGTATGCCTTTCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464834.5
ENST00000484416.5
CDS CCA 90 bp AGACGTGCATCACTCCCCTCAAACACGTCCAGCTGTGCCAGGGGCTaGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RRASLPSNTSSCARG*LQCRQDSNGSTVLL
Trigger: AAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCCAGCCCCTGGCACAGCTGGACGTGTTTGAGGGGAGTGATGCACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460560.5
ENST00000464865.5
CDS-3UTR CAA 90 bp AGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCTGGGGAACAAATGGTaGCTGCTCCAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: RLELLDKPKLGQTRSPSGLGNKW*LLQIST
Trigger: TGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAG...ACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp TGGTCAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTGACAATCCAAGATCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: WSASQVAGSVERRLTIQDHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...ATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 5 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
ENST00000492027.5
CDS-3UTR CAA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGAACAGAGGGATTCTTaGTCCAAGGCAGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPEQRDS*SKAGLQ
Trigger: CTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTTC...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp TGGTCAGCATCTCAGGTGGCTGGCAGTGTTGAGAGACGCCTGACAATCCAAGATAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACC +
Preference number: 5 (lower is better)
Translates to: WSASQVAGSVERRLTIQDSFTAP*DELLAT
Trigger: GGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCT...ATCTTGGATTGTCAGGCGTCTCTCAACACTGCCAGCCACCTGAGATGCTGACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCCATTCCTCATTTCCTTaGTCCTCAGCAAGCACCTCA +
Preference number: 5 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSHSSFP*SSASTS
Trigger: TGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATG...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CCCACCGAAGCACAGGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: PTEAQALQRPKTTPRPAFAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...GAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCCTGTGCTTCGGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR CAA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCAAGTAGAGCCGGGGTTTaGCCCTGTTGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GVVILIGMVDGSWSCESSSRAGV*PCWPGW
Trigger: CCAGCCTGGCCAACAGGGCAAAACCCCGGCTCTACT...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp GGCACTCCAGAGACCAAAAACAACTCCTCGTCCGGCTTTCCCAAACCAGTTGCCCAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GTPETKNNSSSGFPKPVAQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...GGCAACTGGTTTGGGAAAGCCGGACGAGGAGTTGTTTTTGGTCTCTGGAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490760.5
CDS-3UTR CAA 90 bp GCCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGAAGCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: ASIPERPISSGDTRSPKKHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...CTTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484416.5
ENST00000490760.5
CDS-3UTR CAA 90 bp GTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCACTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: VEHTTNTNHAWLCLLFTPLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...TGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCGAACAGAGGGATTCTTaGTCCAAGGCAGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: QDQAGAPRQTQIRADSKPEQRDS*SKAGLQ
Trigger: CTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTTC...GGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp AACAGAGGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATGAACAGAGGGATTCTTaGTCCAAGGCAGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: NRGILCPRQACSSVQLEHEQRDS*SKAGLQ
Trigger: CTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTTC...ATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp AGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCCAGGAGTTGGAGAAGCATCAGAGATGAAGCCTaGCAAAGTTCCACCTATGAT +
Preference number: 5 (lower is better)
Translates to: SQCPLSWSCPIWPRSWRSIRDEA*QSSTYD
Trigger: ATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGAT...GCTTCTCCAACTCCTGGGCCAGATGGGGCAGCTCCATGACAATGGGCACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCAAGCCTTTAGCAGTCTaGCCTGGATTGGGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVKPLAV*PGLGCC
Trigger: ACAACAACCCAATCCAGGCAAGACTGCTAAAGGCTT...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CTGCCACCACCCATTCCTCATTTCCTTTGTCCTCAGCAAGCACCTCAGCGGGTCCTCTTTGAAAAACATTaGGCCAGGCCATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPPPIPHFLCPQQAPQRVLFEKH*ARPCSS
Trigger: GGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAG...GACCCGCTGAGGTGCTTGCTGAGGACAAAGGAAATGAGGAATGGGTGGTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTCTGGGGAACAAATGGTaGCTGCTCCAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPLGNKW*LLQIST
Trigger: TGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAG...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp GACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTGCACAGACGCCGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: DTRSPKKITIPPANCTDAAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...GGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464834.5
ENST00000484416.5
ENST00000490760.5
CDS-3UTR CAA 90 bp AAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: KPRVALPPVHSIFKARESHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...ACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TGGCTACAATGTCGACAGGACTCAAACGGCAGTACTGTTCTCCTTTCACTCACTCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: WLQCRQDSNGSTVLLSLTHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...AGTGAGTGAAAGGAGAACAGTACTGCCGTTTGAGTCCTGTCGACATTGTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464834.5
CDS-3UTR CAA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: GVVILIGMVDGSWSCESSHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: LPFVEHTTNTNHAWLCLLKPRVA*PPVHSI
Trigger: AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT...CAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp GGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: GTYHQHKPRVALPPVHSIKPRVA*PPVHSI
Trigger: AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT...AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGACTCCAGGAAGCTGCTaGTGCCAGAGATCAATCCTC +
Preference number: 5 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWTPGSC*CQRSIL
Trigger: GAGGATTGATCTCTGGCACAAGCAGCTTCCTGGAGT...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp CTCCAACGTCGTACCAAATGGACAGCTTGTCGGCTTCCGCCTCCTTCCAGCCGAGTCATCAGAAGGGCATaGATGGACTTATCATTTGGA +
Preference number: 5 (lower is better)
Translates to: LQRRTKWTACRLPPPSSRVIRRA*MDLSFG
Trigger: TCCAAATGATAAGTCCATCAATGCCCTTCTGATGAC...TCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp TATGTCCCCTTTGTTTGTGAGTTCACTGAGCAAGGACGGAGTGGCTGGAGAAAAAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACC +
Preference number: 5 (lower is better)
Translates to: YVPFVCEFTEQGRSGWRKSFTAP*DELLAT
Trigger: GGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCT...TTTTCTCCAGCCACTCCGTCCTTGCTCAGTGAACTCACAAACAAAGGGGACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCACACAATTGTACAACTaGTCTGGCCCACTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: QDQAGAPRQTQIRADSKPTQLYN*SGPLQL
Trigger: GAGCTGCAGTGGGCCAGACAAGTTGTACAATTGTGT...GGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469636.1
CDS-3UTR CAA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGGCCTGGATTGGGTTGTaGTCATTTGCCTTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLAWIGL*SFAFEV
Trigger: AACTTCAAAGGCAAATGACAACAACCCAATCCAGGC...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS GCA 90 bp GGTGACACCAGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTaGACAGACGCCGTCACCAGAAAGGCATACACTAATGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: GDTRSPKKITIPPAN*TDAVTRKAYTNAEE
Trigger: CTCTTCTGCATTAGTGTATGCCTTTCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCTGGTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469193.5
CDS CCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTCCACAGGCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: KWYPVCRGKESLSLH*GTNGCCSRSPQAAQ
Trigger: TTGAGCTGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
CDS CCA 90 bp ATCCCACCAGCAAACTGCACAGACGCCGTCACCAGAAAGGCATACTaGAGGAGAGGGGTGAAAGGTGGTCCTTACATATCTCATAACCAT +
Preference number: 5 (lower is better)
Translates to: IPPANCTDAVTRKAY*RRGVKGGPYISHNH
Trigger: ATGGTTATGAGATATGTAAGGACCACCTTTCACCCCTCTCCTCCAGTATGCCTTTCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464834.5
ENST00000484416.5
CDS-3UTR CAA 90 bp CCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCCAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PFVEHTTNTNHAWLCLLFQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...GAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp AAGACCAGGCTACTAAGCCCTTGCATCCCTTCTATTGCTGCTGCTATGTCCCCTCAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: KTRLLSPCIPSIAAAMSPQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...AGGGGACATAGCAGCAGCAATAGAAGGGATGCAAGGGCTTAGTAGCCTGGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp CTAGAGGATCCTAAGTTCCCAGACAACAAATCTGGGATGGAGTGCTTCGGCTGTCTGGGGAACAAATGGTaGCTGCTCCAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: LEDPKFPDNKSGMECFGCLGNKW*LLQIST
Trigger: TGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAG...ACAGCCGAAGCACTCCATCCCAGATTTGTTGTCTGGGAACTTAGGATCCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: SKIRLELLDKPKLGQTRSAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...GCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp AAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KPRVALPPVHSIFKARESYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...ACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CAA 90 bp CATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: HLWNIPPTQTTRGFASCSLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...TGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCACTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp TCTTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: SSICGTYHQHKPRVALPPLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...AGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAGAACAGAGGGATTCTTaGTCCAAGGCAGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSEQRDS*SKAGLQ
Trigger: CTGCAAGCCTGCCTTGGACAAAGAATCCCTCTGTTC...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp CTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCCAGCGGTCCTGTCATCAGAAGGGCATaGATGGACTTATCATTTGGA +
Preference number: 5 (lower is better)
Translates to: LELLDKPKLGQTRSPSGPVIRRA*MDLSFG
Trigger: TCCAAATGATAAGTCCATCAATGCCCTTCTGATGAC...AGGACCGCTGGGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326232.14
CDS-3UTR CAA 90 bp GAAGGAGGATCAGGGGAAGGTAGAGTAGCTGCAGGCATGGCTGCCATCCACACTTGTTGTCATTTGCCTTaGAAGTTTCAGCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: EGGSGEGRVAAGMAAIHTCCHLP*KFQLWG
Trigger: TCCCCAAAGCTGAAACTTCAAAGGCAAATGACAACA...AGTGTGGATGGCAGCCATGCCTGCAGCTACTCTACCTTCCCCTGATCCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp ATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTCAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: IQCAEEKSRFLCTGEQMVQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...AACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CAA 90 bp CACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: HKPRVALPPVHSIFKAREAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...TTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp ATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCCACGCTCCCAAAATGTaGCCCACCGAAGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: MLAESEVTRHIHETTAKIHAPKM*PTEAQA
Trigger: TGCCTGTGCTTCGGTGGGCAACATTTTGGGAGCGTG...GATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 5 (lower is better)
Translates to: SKIRLELLDKPKLGQTRSAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...GCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000492027.5
CDS-3UTR CAA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQKPRVA*PPVHSI
Trigger: AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp AAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: KPRVALPPVHSIFKARESKPRVA*PPVHSI
Trigger: AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT...ACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGACTCCAGGAAGCTGCTaGTGCCAGAGATCAATCCTC +
Preference number: 5 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLTPGSC*CQRSIL
Trigger: GAGGATTGATCTCTGGCACAAGCAGCTTCCTGGAGT...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp CAGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACTCCAGGAAGCTGCTaGTGCCAGAGATCAATCCTC +
Preference number: 5 (lower is better)
Translates to: QRSKMLAESEVTRHIHETTPGSC*CQRSIL
Trigger: GAGGATTGATCTCTGGCACAAGCAGCTTCCTGGAGT...TGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACC +
Preference number: 5 (lower is better)
Translates to: LAESEVTRHIHETTAKIISFTAP*DELLAT
Trigger: GGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCT...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000485538.1
ENST00000498469.5
CDS-3UTR CAA 90 bp GGTCTGGATGTCCTGAAGAAGCCAGTGCCCATTGTCATGGAGCTGCCCCATCTGTTGGGTTGTTGTCATTaGCCTTTGAAGTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: GLDVLKKPVPIVMELPHLLGCCH*PLKFQL
Trigger: AAGCTGAAACTTCAAAGGCAAATGACAACAACCCAA...CAGATGGGGCAGCTCCATGACAATGGGCACTGGCTTCTTCAGGACATCCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS TCA 90 bp CATTGTTCTTTCTGTCTCGCGGGCACCGGTCACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACGAGAGAGAATATTTCCCTCACTATT +
Preference number: 5 (lower is better)
Translates to: HCSFCLAGTGHSLNM*ACLLSTRENISLTI
Trigger: AATAGTGAGGGAAATATTCTCTCTCGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTGACCGGTGCCCGCGAGACAGAAAGAACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000469636.1
ENST00000473060.5
ENST00000491357.5
ENST00000492027.5
CDS CCA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTGAAGAAAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KWYPVCRGKESLSLH*GTNGCCSRSEESEQ
Trigger: CTGCTCACTTTCTTCAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461089.5
CDS-3UTR CAA 90 bp GGTGTCCAGTCAGGGGTATTAAATGCATTTGACTTCCAATGGGTTTACTGGGACCTGGGGAACAAATGGTaGCTGCTCCAGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: GVQSGVLNAFDFQWVYWDLGNKW*LLQIST
Trigger: TGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAG...GTCCCAGTAAACCCATTGGAAGTCAAATGCATTTAATACCCCTGACTGGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp ATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: IPPTQTTRGFASCSLHFQAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...TTGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp CCTCAATACCCGAGAGACCAATTTCTTCTGGTGACACCAGGAGTCCAAAGAAGAGCTTTCCCAAACCAGTaGCCCATAACAGCAACCACA +
Preference number: 5 (lower is better)
Translates to: PQYPRDQFLLVTPGVQRRAFPNQ*PITATT
Trigger: TGTGGTTGCTGTTATGGGCAACTGGTTTGGGAAAGC...TCTTCTTTGGACTCCTGGTGTCACCAGAAGAAATTGGTCTCTCGGGTATTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484416.5
ENST00000490760.5
CDS-3UTR CAA 90 bp CTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCATCTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LAESEVTRHIHETTAKIIYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...GATGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CAA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGCCCAGGTATCCCTCAAAATaGCACATTCTCCTCCTAGTT +
Preference number: 5 (lower is better)
Translates to: QDQAGAPRQTQIRADSKPRYPSK*HILLLV
Trigger: AACTAGGAGGAGAATGTGCAATTTTGAGGGATACCT...GGGCTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp GGGATTCTTTGTCCAAGGCAGGCTTGCAGCTCGGTCCAGCTTGAGCATTTGATCAGGTATCCCTCAAAATaGCACATTCTCCTCCTAGTT +
Preference number: 5 (lower is better)
Translates to: GILCPRQACSSVQLEHLIRYPSK*HILLLV
Trigger: AACTAGGAGGAGAATGTGCAATTTTGAGGGATACCT...GATCAAATGCTCAAGCTGGACCGAGCTGCAAGCCTGCCTTGGACAAAGAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACACTGGGGAACAAATGGTaGCTGCTCCAGATCTGTAAT +
Preference number: 5 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTLGNKW*LLQICN
Trigger: ATTACAGATCTGGAGCAGCAACCATTTGTTCCCCAG...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CAA 90 bp CATATTAGGGCCTCAGTATGGGCTGTGATCTGTTGTCAGTTCAGGCTTGGAGGGCTTGCCTGGATTGGGTaGTTGTCATTTGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: HIRASVWAVICCQFRLGGLAWIG*LSFAFE
Trigger: TTCAAAGGCAAATGACAACAACCCAATCCAGGCAAG...CCCTCCAAGCCTGAACTGACAACAGATCACAGCCCATACTGAGGCCCTAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp GGTGTCGTCATCCTTATAGGGATGGTAGATGGTAGCTGGTCCTGTGAATCTTCACTTGCATCCCTTCTATaGCTGCTGCTATGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: GVVILIGMVDGSWSCESSLASLL*LLLCPL
Trigger: AAGGGGACATAGCAGCAGCAATAGAAGGGATGCAAG...TGAAGATTCACAGGACCAGCTACCATCTACCATCCCTATAAGGATGACGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477571.5
CDS-3UTR CAA 90 bp AAATGGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTGGGGAACACTCTTTGAAAAACATTaGGCCAGGCCATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: KWYPVCRGKESLSLHWGTLFEKH*ARPCSS
Trigger: GGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAG...TGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462881.1
CDS-3UTR CAA 90 bp CTTTGCCTCCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LCLLFTPFSRLEKVQVQNYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...GTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGGAGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CAA 90 bp AGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAAAAACCACGCGTGGCTTaGCCTCCTGTTCACTCCATT +
Preference number: 5 (lower is better)
Translates to: RCWQSQKSLGTFMKQQQKKPRVA*PPVHSI
Trigger: AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTT...TTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000485538.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp AACCTCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGAGGTATCCCTCAAAATaGCACATTCTCCTCCTAGTT +
Preference number: 5 (lower is better)
Translates to: NLNRPNKDAGRVRGQRCWRYPSK*HILLLV
Trigger: AACTAGGAGGAGAATGTGCAATTTTGAGGGATACCT...CCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGAATCAGAGATGAAGCCTaGCAAAGTTCCACCTATGAT +
Preference number: 5 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRIRDEA*QSSTYD
Trigger: ATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGAT...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS-3UTR CAA 90 bp GGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTATCAGAGATGAAGCCTaGCAAAGTTCCACCTATGAT +
Preference number: 5 (lower is better)
Translates to: GTYHQHKPRVALPPVHSIIRDEA*QSSTYD
Trigger: ATCATAGGTGGAACTTTGCAAGGCTTCATCTCTGAT...AATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000447932.6
CDS GCA 90 bp CACACATTTGGGGCGAATCTTTACCTACACTGGATTTCCACATTGTaGTGGTGGTTCTCACCCTGCAGCAATATTTGGCAGAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: HTFGANLYLHWISTL*WWFSPCSNIWQSLL
Trigger: CAAAAGACTCTGCCAAATATTGCTGCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAGATTCGCCCCAAATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 90 bp CCAAGCTATGCTCTTTGTATTTATAGTGACCTTGGTGGAGAGGGTTaGGTGGTAGACAGAGGTAAGATCTCTCTCCCCTTGACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: PSYALCIYSDLGGEG*VVDRGKISLPLTSK
Trigger: TTTGGAAGTCAAGGGGAGAGAGATCTTACCTCTGTCTACCACCCAACCCTCTCCACCAAGGTCACTATAAATACAAAGAGCATAGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS-3UTR CAA 90 bp CTGTGGGCAATTCTAAGTGTTCTGAGTACATTTAGGGTGGACGAGGCTAAGCTGCTCTTTGAAAAACATTaGGCCAGGCCATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LWAILSVLSTFRVDEAKLLFEKH*ARPCSS
Trigger: GGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAG...CAGCTTAGCCTCGTCCACCCTAAATGTACTCAGAACACTTAGAATTGCCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp AGAGGTCAAAGATGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAAGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 5 (lower is better)
Translates to: RGQRCWQSQKSLGTFMKQAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...TTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCATCTTTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000492027.5
CDS-3UTR CAA 90 bp TCAATAGGCCAAACAAAGACGCGGGCAGAGTCAGAGGTCAAAGATGCTGGCAGAAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: SIGQTKTRAESEVKDAGRNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...TCTGCCAGCATCTTTGACCTCTGACTCTGCCCGCGTCTTTGTTTGGCCTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp TTCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTAGGTATCCCTCAAAATaGCACATTCTCCTCCTAGTT +
Preference number: 5 (lower is better)
Translates to: FHLWNIPPTQTTRGFASCRYPSK*HILLLV
Trigger: AACTAGGAGGAGAATGTGCAATTTTGAGGGATACCT...ACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTGTCATCAGAAGGGCATaGATGGACTTATCATTTGGA +
Preference number: 5 (lower is better)
Translates to: SICGTYHQHKPRVALPPVVIRRA*MDLSFG
Trigger: TCCAAATGATAAGTCCATCAATGCCCTTCTGATGAC...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326232.14
ENST00000498469.5
CDS-3UTR CAA 90 bp ATCCAAGATCAGGCTGGAGCTCCTAGACAAACCCAAATTAGGGCAGACTCGAAGAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: IQDQAGAPRQTQIRADSKNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...CTTCGAGTCTGCCCTAATTTGGGTTTGTCTAGGAGCTCCAGCCTGATCTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp TCCATTTGTGGAACATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: SICGTYHQHKPRVALPPVNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...AACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATGTTCCACAAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CATACCACCAACACAAACCACGCGTGGCTTTGCCTCCTGTTCACTCCATTTTCAAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: HTTNTNHAWLCLLFTPFSNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...TGAAAATGGAGTGAACAGGAGGCAAAGCCACGCGTGGTTTGTGTTGGTGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
ENST00000491357.5
ENST00000498469.5
CDS-3UTR CAA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTAAGCTTCACTGCTCCTTaGGATGAGCTCCTGGCGACC +
Preference number: 5 (lower is better)
Translates to: HSIFKARESSSPKQQLRLSFTAP*DELLAT
Trigger: GGTCGCCAGGAGCTCATCCAAAGGAGCAGTGAAGCT...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000485538.1
ENST00000498469.5
CDS GCA 90 bp CTTTACCTACACTGGATTTCCACATTGTGCTGGTGGTTCTCACCCTaGAGCAATATTTGGCAGAGTCTTTTGTTTTCTTGCTATACCTGC +
Preference number: 5 (lower is better)
Translates to: LYLHWISTLCWWFSP*SNIWQSLLFSCYTC
Trigger: GCAGGTATAGCAAGAAAACAAAAGACTCTGCCAAATATTGCTGCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS GCA 90 bp ATACTTCAAGTATATAACCTGTGTCACCACCACTCAGGGCTAGAATaGCTTCTTAGCCATGTGGTGGTGTGTATCTTTAATCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: ILQVYNLCHHHSGLE*LLSHVVVCIFNPSY
Trigger: GTAGCTGGGATTAAAGATACACACCACCACATGGCTAAGAAGGCATTCTAGCCCTGAGTGGTGGTGACACAGGTTATATACTTGAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 90 bp ACATTTGGGGCGAATCTTTACCTACACTGGATTTCCACATTGTGCTaGTGGTTCTCACCCTGCAGCAATATTTGGCAGAGTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: TFGANLYLHWISTLC*WFSPCSNIWQSLLF
Trigger: AAACAAAAGACTCTGCCAAATATTGCTGCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAGATTCGCCCCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 90 bp GTGAAATTCATAGAGTCAGAAAGTAGCATGGTGGTTGCCCATGGCTaGAGGGAAGGGGAAATGAGAAATTGTTGTTTAATGGCTATGGAG +
Preference number: 5 (lower is better)
Translates to: VKFIESESSMVVAHG*REGEMRNCCLMAME
Trigger: CTCCATAGCCATTAAACAACAATTTCTCATTTCCCCTTCCCTCCAGCCATGGGCAACCACCATGCTACTTTCTGACTCTATGAATTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS-3UTR CAA 90 bp TGCTGGCAGAGTCAGAAGTCACTCGGCACATTCATGAAACAACAGCAAAAATCACTCTTTGAAAAACATTaGGCCAGGCCATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: CWQSQKSLGTFMKQQQKSLFEKH*ARPCSS
Trigger: GGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAG...TGATTTTTGCTGTTGTTTCATGAATGTGCCGAGTGACTTCTGACTCTGCCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACACAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp CACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTAAGGTTATACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HSIFKARESSSPKQQLRLYQMDS*SASASF
Trigger: GAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTA...TAACCTTAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000491357.5
CDS-3UTR CAA 90 bp TATCCCCTAACCGAATGCAAATTAGGTATCCCTCAAAATTGCACATTCTCCTCCCTCTTTGAAAAACATTaGGCCAGGCCATGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: YPLTECKLGIPQNCTFSSLFEKH*ARPCSS
Trigger: GGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAG...GGAGGAGAATGTGCAATTTTGAGGGATACCTAATTTGCATTCGGTTAGGGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp CCTGTTCACTCCATTTTCAAGGCTAGAGAAAGTTCAAGTCCAAAACAACAGTTACAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PVHSIFKARESSSPKQQLQQRPS*KNIWPG
Trigger: GCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTG...TAACTGTTGTTTTGGACTTGAACTTTCTCTAGCCTTGAAAATGGAGTGAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TTTGTGTTAGATGATTCTGCCCAACTGTGGGCAATTCTAAGTGTTCTGAGTACAGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 5 (lower is better)
Translates to: FVLDDSAQLWAILSVLSTAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...TGTACTCAGAACACTTAGAATTGCCCACAGTTGGGCAGAATCATCTAACACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp GAAGCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTGCTTATCGCCTTGACTaGGGCAACAGAACTATCATC +
Preference number: 5 (lower is better)
Translates to: EAACARDQSSKNRLSRLAAYRLD*GNRTII
Trigger: GATGATAGTTCTGTTGCCCAAGTCAAGGCGATAAGC...AGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
CDS-3UTR CAA 90 bp TCAACACTCGATTATAAAATAGAGTTTGTGTTAGATGATTCTGCCCAACTGTGGCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGG +
Preference number: 5 (lower is better)
Translates to: STLDYKIEFVLDDSAQLWLMWLT*FFLSRG
Trigger: CCCGCGAGACAGAAAGAACAATGTCAGCCACATCAG...CCACAGTTGGGCAGAATCATCTAACACAAACTCTATTTTATAATCGAGTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp GCTGCTTGTGCCAGAGATCAATCCTCTAAAAATAGACTAAGCAGATTAGCTTCCAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: AACARDQSSKNRLSRLASNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...GGAAGCTAATCTGCTTAGTCTATTTTTAGAGGATTGATCTCTGGCACAAGCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS-3UTR CAA 90 bp AAAGAGCATCTGTACTTGACACTTACTAGAAGAAAAGGTCTTTCCCTTTTCTCTAATGATCTCTTCCATTaGTGGAACATACCACCAACA +
Preference number: 5 (lower is better)
Translates to: KEHLYLTLTRRKGLSLFSNDLFH*WNIPPT
Trigger: TGTTGGTGGTATGTTCCACAAATGGAAGAGATCATT...AGAGAAAAGGGAAAGACCTTTTCTTCTAGTAAGTGTCAAGTACAGATGCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000469636.1
CDS CCA 72 bp AGGCTGCGGGATGCCGGCGGGAGGACATCATCGGGGTaGACGCTGCCTGTGCCTCCCAGCAAGGCTTGTAGG +
Preference number: 6 (lower is better)
Translates to: RLRDAGGRTSSG*TLPVPPSKACR
Trigger: CCTACAAGCCTTGCTGGGAGGCACAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS GCA 72 bp GGGATGCCGGCGGGAGGACATCATCGGGGTGGACGCTaGCTGTGCCTCCCAGCAAGGCTTGTAGGCTCAATG +
Preference number: 6 (lower is better)
Translates to: GMPAGGHHRGGR*LCLPARLVGSM
Trigger: CATTGAGCCTACAAGCCTTGCTGGGAGGCACAGGCAGCGTCCACCCCGATGATGTCCTCCCGCCGGCATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS TCA 72 bp AGCAGAGGTGAGAGAGCGAGACAGGTAAGCGACAGGTaGACCAGGAAGGCGAAGGCTGCGGGATGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: SRGERARQVSDR*TRKAKAAGCRR
Trigger: CCGCCGGCATCCCGCAGCCTTCGCCTTCCTGGTTCACCTGTCGCTTACCTGTCTCGCTCTCTCACCTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS GCA 72 bp ACAGGTAAGCGACAGGTGAACCAGGAAGGCGAAGGCTaGGGGATGCCGGCGGGAGGACATCATCGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: TGKRQVNQEGEG*GMPAGGHHRGG
Trigger: TCCACCCCGATGATGTCCTCCCGCCGGCATCCCGCAGCCTTCGCCTTCCTGGTTCACCTGTCGCTTACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS CCA 72 bp GTGATTTACATCATTTCTTCCTTCCGAGATCCGCAGTaGTCGCCGCTCTCCAGCCCCGGCTCCGCTCGCCGG +
Preference number: 6 (lower is better)
Translates to: VIYIISSFRDPQ*SPLSSPGSARR
Trigger: CCGGCGAGCGGAGCCGGGGCTGGAGAGCGGCGACCACTGCGGATCTCGGAAGGAAGAAATGATGTAAATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326232.14
ENST00000447932.6
ENST00000460560.5
ENST00000461089.5
ENST00000462881.1
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
ENST00000490760.5
ENST00000495257.1
CDS GCA 72 bp CCACTGCTCTCAGTGAGGCTGCCCATGAATCAGGCATaGGATGGCCCAGGTGAATCTGGTCCCACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PLLSVRLPMNQA*DGPGESGPTAG
Trigger: TCCAGCAGTGGGACCAGATTCACCTGGGCCATCGCATGCCTGATTCATGGGCAGCCTCACTGAGAGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473060.5
CDS CAA 72 bp AGACTCGAAGCCCCAGCGGTCCTGATGTGGCTGACATaGTTCTTTCTGTCTCGCGGGCACCGGTCACTCCCT +
Preference number: 6 (lower is better)
Translates to: RLEAPAVLMWLT*FFLSRGHRSLP
Trigger: AGGGAGTGACCGGTGCCCGCGAGACAGAAAGAACAATGTCAGCCACATCAGGACCGCTGGGGCTTCGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000469636.1
ENST00000473060.5
ENST00000477006.1
ENST00000485538.1
ENST00000491357.5
ENST00000492027.5
ENST00000498469.5
CDS GCA 72 bp CCCATAACAGCAACCACACAGGGCCAACCAGTGGACTaGAGCAGGCCGTTCACAATCCACAGGCAGCAGTAC +
Preference number: 6 (lower is better)
Translates to: PITATTQGQPVD*SRPFTIHRQQY
Trigger: GTACTGCTGCCTGTGGATTGTGAACGGCCTGCTGCAGTCCACTGGTTGGCCCTGTGTGGTTGCTGTTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000461089.5
ENST00000464834.5
ENST00000464865.5
ENST00000473707.5
ENST00000477571.5
ENST00000484416.5
ENST00000485861.5
ENST00000490760.5
CDS GCA 72 bp AAGACGTGCATCACTCCCCTCAAACACGTCCAGCTGTaGCAGGGGCTGGCTACAATGTCGACAGGACTCAAA +
Preference number: 6 (lower is better)
Translates to: KTCITPLKHVQL*QGLATMSTGLK
Trigger: TTTGAGTCCTGTCGACATTGTAGCCAGCCCCTGGCACAGCTGGACGTGTTTGAGGGGAGTGATGCACGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460560.5
ENST00000464865.5
CDS TCA 72 bp GACACAGCGAGACTCTGTCTCCACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGGGGTCCACTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: DTARLCLHRQLN*RVKSTWGPLLR
Trigger: TCTGAGCAGTGGACCCCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTGGAGACAGAGTCTCGCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495257.1
CDS CCA 72 bp CCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTCCACAG +
Preference number: 6 (lower is better)
Translates to: PVCRGKESLSLH*GTNGCCSRSPQ
Trigger: CTGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
CDS TCA 72 bp ATGGTTGCTGCTCCAGATCTCCACAGGCAGCTCAACTaGCGTGTTAAAAGCACTTGGGGTCCACTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: MVAAPDLHRQLN*RVKSTWGPLLR
Trigger: TCTGAGCAGTGGACCCCAAGTGCTTTTAACACGTCAGTTGAGCTGCCTGTGGAGATCTGGAGCAGCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
CDS TCA 72 bp TTCTGTCTCGCGGGCACCGGTCACTCCCTCAATATGTaGGCCTGTCTCCTTAGCACGAGAGAGAATATTTCC +
Preference number: 6 (lower is better)
Translates to: FCLAGTGHSLNM*ACLLSTRENIS
Trigger: GGAAATATTCTCTCTCGTGCTAAGGAGACAGGCTCACATATTGAGGGAGTGACCGGTGCCCGCGAGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000469636.1
ENST00000473060.5
ENST00000491357.5
ENST00000492027.5
CDS GCA 72 bp GGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTaGACTGGGGAACAAATGGTTGCTGCTCCAGATCTC +
Preference number: 6 (lower is better)
Translates to: GIQCAEEKSRFL*TGEQMVAAPDL
Trigger: GAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGGATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
CDS GCA 72 bp AGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTaGACAGACGCCGTCACCAGAAAGGCATACTGGAGG +
Preference number: 6 (lower is better)
Translates to: RSPKKITIPPAN*TDAVTRKAYWR
Trigger: CCTCCAGTATGCCTTTCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464834.5
ENST00000484416.5
CDS CAA 72 bp ACTATGATCCCTCCAACGTCGTACCAAATGGACAGCTaGTCGGCTTCCGCCTCCTTCCAGCCGAAGTTGTTA +
Preference number: 6 (lower is better)
Translates to: TMIPPTSYQMDS*SASASFQPKLL
Trigger: TAACAACTTCGGCTGGAAGGAGGCGGAAGCCGACAAGCTGTCCATTTGGTACGACGTTGGAGGGATCATAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340308.7
CDS CCA 72 bp CCAGTGTGCCGAGGAAAAGAGTCGCTTTCTCTGCACTaGGGAACAAATGGTTGCTGCTCCAGATCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: PVCRGKESLSLH*GTNGCCSRSEE
Trigger: TTCTTCAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTTCCTCGGCACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461089.5
CDS CAA 72 bp AAAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTaGCTGCTCCAGATCTCCACAGGCAGCTCAACTGAC +
Preference number: 6 (lower is better)
Translates to: KRVAFSALGNKW*LLQISTGSSTD
Trigger: GTCAGTTGAGCTGCCTGTGGAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
CDS TCA 72 bp ACGCCGTCACCAGAAAGGCATACTGGAGGAGAGGGGTaGAAGGTGGTCCTTACATATCTCATAACCATACTG +
Preference number: 6 (lower is better)
Translates to: TPSPERHTGGEG*KVVLTYLITIL
Trigger: CAGTATGGTTATGAGATATGTAAGGACCACCTTTCACCCCTCTCCTCCAGTATGCCTTTCTGGTGACGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464834.5
ENST00000484416.5
CDS CCA 72 bp CCTGATCACACATTTGGGGCGAATCTTTACCTACACTaGATTTCCACATTGTGCTGGTGGTTCTCACCCTGC +
Preference number: 6 (lower is better)
Translates to: PDHTFGANLYLH*ISTLCWWFSPC
Trigger: GCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAGATTCGCCCCAAATGTGTGATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS GCA 72 bp AAAGAGTCGCTTTCTCTGCACTGGGGAACAAATGGTTaGTGCTCCAGATCTGAAGAAAGTGAGCAGGAACAC +
Preference number: 6 (lower is better)
Translates to: KESLSLHWGTNG*CSRSEESEQEH
Trigger: GTGTTCCTGCTCACTTTCTTCAGATCTGGAGCAGCAACCATTTGTTCCCCAGTGCAGAGAAAGCGACTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461089.5
CDS GCA 72 bp AGGAGTCCAAAGAAGATAACGATCCCACCAGCAAACTaGACAGACGCCGTCACCAGAAAGGCATACACTAAT +
Preference number: 6 (lower is better)
Translates to: RSPKKITIPPAN*TDAVTRKAYTN
Trigger: ATTAGTGTATGCCTTTCTGGTGACGGCGTCTGTGCAGTTTGCTGGTGGGATCGTTATCTTCTTTGGACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469193.5
CDS CAA 72 bp ATGATGATGGCTGAACTGGGACAGCAGAGACCCTCTTaGAAAAACATTTGGCCAGGCCATGTTCTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: MMMAELGQQRPS*KNIWPGHVLPD
Trigger: GTCAGGAAGAACATGGCCTGGCCAAATGTTTTTCAAAGAGGGTCTCTGCTGTCCCAGTTCAGCCATCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000461089.5
ENST00000462881.1
ENST00000464865.5
ENST00000469193.5
ENST00000477571.5
ENST00000490760.5
ENST00000495257.1
CDS CAA 72 bp TGCCCATGGCTGGAGGGAAGGGGAAATGAGAAATTGTaGTTTAATGGCTATGGAGTTTCCGTTTGGGATGCC +
Preference number: 6 (lower is better)
Translates to: CPWLEGRGNEKL*FNGYGVSVWDA
Trigger: GGCATCCCAAACGGAAACTCCATAGCCATTAAACAACAATTTCTCATTTCCCCTTCCCTCCAGCCATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 72 bp GCGAATCTTTACCTACACTGGATTTCCACATTGTGCTaGTGGTTCTCACCCTGCAGCAATATTTGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: ANLYLHWISTLC*WFSPCSNIWQS
Trigger: ACTCTGCCAAATATTGCTGCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAGATTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 72 bp CAAAGACAAACACCACAGCATAGGAGAAGAGGAAAATaGTATCCAGTGTGCCGAGGAAAAGAGTCGCTTTCT +
Preference number: 6 (lower is better)
Translates to: QRQTPQHRRRGK*YPVCRGKESLS
Trigger: AGAAAGCGACTCTTTTCCTCGGCACACTGGATACCATTTTCCTCTTCTCCTATGCTGTGGTGTTTGTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464865.5
CDS GCA 72 bp CACCAAAGACAAACACCACTAATGCAGAAGAGCACATaGCAAAAGACAGAACCCATCGCAAATTCAACCGAT +
Preference number: 6 (lower is better)
Translates to: HQRQTPLMQKST*QKTEPIANSTD
Trigger: ATCGGTTGAATTTGCGATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCATTAGTGGTGTTTGTCTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000461089.5
ENST00000464834.5
ENST00000473707.5
ENST00000477571.5
ENST00000484416.5
ENST00000485861.5
CDS GCA 72 bp TCACCAGAAAGGCATACACTAATGCAGAAGAGCACATaGCAAAAGACAGAACCCATCGCAAATTCAACCGAT +
Preference number: 6 (lower is better)
Translates to: SPERHTLMQKST*QKTEPIANSTD
Trigger: ATCGGTTGAATTTGCGATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCATTAGTGTATGCCTTTCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469193.5
CDS GCA 72 bp CTGGCCAGTAATGTTAGCTCAGCTTTATGCTTCTACTaGCAGCATCTGGGACTGATAAACTTGAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: LASNVSSALCFY*QHLGLINLRFS
Trigger: AGAAAACCTCAAGTTTATCAGTCCCAGATGCTGGCAGTAGAAGCATAAAGCTGAGCTAACATTACTGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491505.1
CDS GCA 72 bp GTATATAACCTGTGTCACCACCACTCAGGGCTAGAATaGCTTCTTAGCCATGTGGTGGTGTGTATCTTTAAT +
Preference number: 6 (lower is better)
Translates to: VYNLCHHHSGLE*LLSHVVVCIFN
Trigger: ATTAAAGATACACACCACCACATGGCTAAGAAGGCATTCTAGCCCTGAGTGGTGGTGACACAGGTTATATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 72 bp AATCTTTACCTACACTGGATTTCCACATTGTGCTGGTaGTTCTCACCCTGCAGCAATATTTGGCAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: NLYLHWISTLCW*FSPCSNIWQSL
Trigger: AAGACTCTGCCAAATATTGCTGCAGGGTGAGAACCACCAGCACAATGTGGAAATCCAGTGTAGGTAAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CCA 72 bp ATAGAGTCAGAAAGTAGCATGGTGGTTGCCCATGGCTaGAGGGAAGGGGAAATGAGAAATTGTTGTTTAATG +
Preference number: 6 (lower is better)
Translates to: IESESSMVVAHG*REGEMRNCCLM
Trigger: CATTAAACAACAATTTCTCATTTCCCCTTCCCTCCAGCCATGGGCAACCACCATGCTACTTTCTGACTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CAA 72 bp GGACTGATAAACTTGAGGTTTTCTGGACGTCAACCTTaGCTCTATGGTAGAATTTTTGAGGGAGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GLINLRFSGRQP*LYGRIFEGVRQ
Trigger: CTGCCTCACTCCCTCAAAAATTCTACCATAGAGCAAAGGTTGACGTCCAGAAAACCTCAAGTTTATCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS CAA 72 bp TTATGCTTCTACTGCCAGCATCTGGGACTGATAAACTaGAGGTTTTCTGGACGTCAACCTTTGCTCTATGGT +
Preference number: 6 (lower is better)
Translates to: LCFYCQHLGLIN*RFSGRQPLLYG
Trigger: ACCATAGAGCAAAGGTTGACGTCCAGAAAACCTCAAGTTTATCAGTCCCAGATGCTGGCAGTAGAAGCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491505.1
ENST00000493423.1
CDS CAA 90 bp GTGGTTCTCACCCTGCAGCAATATTTGGCAGAGTCTTTTGTTTTCTaGCTATACCTGCCAGTGTTGAGTTTATCTCACTCAGAAGAGAGT +
Preference number: 6 (lower is better)
Translates to: VVLTLQQYLAESFVF*LYLPVLSLSHSEES
Trigger: ACTCTCTTCTGAGTGAGATAAACTCAACACTGGCAGGTATAGCAAGAAAACAAAAGACTCTGCCAAATATTGCTGCAGGGTGAGAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS TCA 72 bp CTTTATTATGGAAAAGATGTATCACCGGCATACCTATaGTCCCTCCAACGTCGTACCAAATGGACAGCTTGT +
Preference number: 6 (lower is better)
Translates to: LYYGKDVSPAYL*SLQRRTKWTAC
Trigger: ACAAGCTGTCCATTTGGTACGACGTTGGAGGGATCATAGGTATGCCGGTGATACATCTTTTCCATAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487319.1
CDS GCA 72 bp AGCTCAACTGACGTGTTAAAAGCACTTGGGGTCCACTaGTCAGAGATACTGACTTTGACATTGCTAAATGTT +
Preference number: 6 (lower is better)
Translates to: SSTDVLKALGVH*SEILTLTLLNV
Trigger: AACATTTAGCAATGTCAAAGTCAGTATCTCTGAGCAGTGGACCCCAAGTGCTTTTAACACGTCAGTTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000462881.1
ENST00000464865.5
ENST00000467233.1
ENST00000469193.5
ENST00000477571.5
ENST00000495257.1
CDS GCA 72 bp AAAAACAACTCCTCGTCACTAATGCAGAAGAGCACATaGCAAAAGACAGAACCCATCGCAAATTCAACCGAT +
Preference number: 6 (lower is better)
Translates to: KNNSSSLMQKST*QKTEPIANSTD
Trigger: ATCGGTTGAATTTGCGATGGGTTCTGTCTTTTGGCATGTGCTCTTCTGCATTAGTGACGAGGAGTTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460560.5
CDS CAA 90 bp AGCTCAGCTTTATGCTTCTACTGCCAGCATCTGGGACTGATAAACTaGAGGTTTTCTGGACGTCAACCTTTGCTCTATGGTAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: SSALCFYCQHLGLIN*RFSGRQPLLYGRIF
Trigger: AAAAATTCTACCATAGAGCAAAGGTTGACGTCCAGAAAACCTCAAGTTTATCAGTCCCAGATGCTGGCAGTAGAAGCATAAAGCTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491505.1
CDS CAA 90 bp ACCTCAGCTTTATGCTTCTACTGCCAGCATCTGGGACTGATAAACTaGAGGTTTTCTGGACGTCAACCTTTGCTCTATGGTAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: TSALCFYCQHLGLIN*RFSGRQPLLYGRIF
Trigger: AAAAATTCTACCATAGAGCAAAGGTTGACGTCCAGAAAACCTCAAGTTTATCAGTCCCAGATGCTGGCAGTAGAAGCATAAAGCTGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS TCA 72 bp GAAAATGCTGGTTGCAACCCACAAAGGTTGATTTCATaGCTCATTTATAGGTCTCAGCCCACAGTTTGGAAA +
Preference number: 6 (lower is better)
Translates to: ENAGCNPQRLIS*LIYRSQPTVWK
Trigger: TTTCCAAACTGTGGGCTGAGACCTATAAATGAGTCATGAAATCAACCTTTGTGGGTTGCAACCAGCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CAA 72 bp CCACTCATTTTCCAATTAGGCTGTTTGCTCACAGTGTaGCAGTACTACCTTTGCATCCTACAGCATATTCTT +
Preference number: 6 (lower is better)
Translates to: PLIFQLGCLLTV*QYYLCILQHIL
Trigger: AAGAATATGCTGTAGGATGCAAAGGTAGTACTGCAACACTGTGAGCAAACAGCCTAATTGGAAAATGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485139.1
CDS CAA 72 bp GGTTGGGTGGTAGACAGAGGTAAGATCTCTCTCCCCTaGACTTCCAAAACCATCAGGATATTTAAATATTTG +
Preference number: 6 (lower is better)
Translates to: GWVVDRGKISLP*TSKTIRIFKYL
Trigger: CAAATATTTAAATATCCTGATGGTTTTGGAAGTCAAGGGGAGAGAGATCTTACCTCTGTCTACCACCCAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CAA 90 bp AATAGTTTGTCTTTAAGTATGCCACTCATTTTCCAATTAGGCTGTTaGCTCACAGTGTTGCAGTACTACCTTTGCATCCTACAGCATATT +
Preference number: 6 (lower is better)
Translates to: NSLSLSMPLIFQLGC*LTVLQYYLCILQHI
Trigger: AATATGCTGTAGGATGCAAAGGTAGTACTGCAACACTGTGAGCAAACAGCCTAATTGGAAAATGAGTGGCATACTTAAAGACAAACTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485139.1
CDS TCA 72 bp AGAGATACTGACTTTGACATTGCTAAATGTTTTTCGTaGAGCATGGAGCAACGAATAACTGAAGAAAGTGAG +
Preference number: 6 (lower is better)
Translates to: RDTDFDIAKCFS*SMEQRITEESE
Trigger: CTCACTTTCTTCAGTTATTCGTTGCTCCATGCTTCACGAAAAACATTTAGCAATGTCAAAGTCAGTATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000326232.14
ENST00000340308.7
ENST00000447932.6
ENST00000460560.5
ENST00000462881.1
ENST00000464865.5
ENST00000467233.1
ENST00000469193.5
ENST00000477571.5
ENST00000495257.1
CDS TCA 72 bp AACATCCACGTTCCTGAAATCCCTTCTCGAATTATGTaGCACTCTAGTATATTTTGTAGAACCCAAAGATAC +
Preference number: 6 (lower is better)
Translates to: NIHVPEIPSRIM*HSSIFCRTQRY
Trigger: GTATCTTTGGGTTCTACAAAATATACTAGAGTGTCACATAATTCGAGAAGGGATTTCAGGAACGTGGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473060.5
CDS CAA 90 bp ACATCACCCTGTAAAATATGCATGTGTACAACTGACCCAAACATTTaGCAAAACAGTAGTCACTGTTACTACACAAGATACATTCTGAAG +
Preference number: 6 (lower is better)
Translates to: TSPCKICMCTTDPNI*QNSSHCYYTRYILK
Trigger: CTTCAGAATGTATCTTGTGTAGTAACAGTGACTACTGTTTTGCAAAATGTTTGGGTCAGTTGTACACATGCATATTTTACAGGGTGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1
CDS CAA 72 bp TGTAAAATATGCATGTGTACAACTGACCCAAACATTTaGCAAAACAGTAGTCACTGTTACTACACAAGATAC +
Preference number: 6 (lower is better)
Translates to: CKICMCTTDPNI*QNSSHCYYTRY
Trigger: GTATCTTGTGTAGTAACAGTGACTACTGTTTTGCAAAATGTTTGGGTCAGTTGTACACATGCATATTTTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493423.1