RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC37A2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134955

Ensembl transcript IDs: ENST00000308074.4, ENST00000354617.5, ENST00000403796.7, ENST00000525837.5, ENST00000526405.5, ENST00000532000.5

Found 446 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTaGCCGGGGCCGGAAGGGCCGGCCGGCTGCTCCGAGTGCAGGCCC +
Preference number: 1 (lower is better)
Translates to: QYTLCSRWPGCQVPH*PGPEGPAGCSECRP
Trigger: GGGCCTGCACTCGGAGCAGCCGGCCGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp CACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTaGCAAGTCCCTCACTGCCCGGGGCCGGAAGGGCCGGCCGGCTGC +
Preference number: 1 (lower is better)
Translates to: HCWGTQYTLCSRWPG*QVPHCPGPEGPAGC
Trigger: GCAGCCGGCCGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp GTGGGCCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTaGCCCGGGTGCCAAGTCCCTCACTGCCCGGGGCCGGAAGGGCCG +
Preference number: 1 (lower is better)
Translates to: VGRHCWGTQYTLCSR*PGCQVPHCPGPEGP
Trigger: CGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp TACTCGTCGGGGAGGCTCGGGCCCCACAGGAGCCCATGGAGCGGGTaGGAGGCTCAGGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCC +
Preference number: 1 (lower is better)
Translates to: YSSGRLGPHRSPWSG*EAQAPRAAGPEPCP
Trigger: GGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCCTCCCACCCGCTCCATGGGCTCCTGTGGGGCCCGAGCCTCCCCGACGAGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp CCCGCACCGGGGCTGCAGGTGGAGCTGCCTGCCAGTCCCGCGCCGTaGGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCG +
Preference number: 1 (lower is better)
Translates to: PAPGLQVELPASPAP*ARTPQPLGGRWDWA
Trigger: CGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCACGGCGCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp TCCGAGTGCAGGCCCGCCAAGCCCATGCCCACCCGGAACTCCAGCTaGCCCGCAAGCGCTGCATGCAGCCCCGGTTCCCGCTCGCGCCTC +
Preference number: 1 (lower is better)
Translates to: SECRPAKPMPTRNSS*PASAACSPGSRSRL
Trigger: GAGGCGCGAGCGGGAACCGGGGCTGCATGCAGCGCTTGCGGGCCAGCTGGAGTTCCGGGTGGGCATGGGCTTGGCGGGCCTGCACTCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp GCCTGCCAGTCCCGCGCCGTGCGCTCGCACTCCTCAGCCCTTGGGTaGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGTGGTACTCGTC +
Preference number: 1 (lower is better)
Translates to: ACQSRAVRSHSSALG*SMGLGALEQGVVLV
Trigger: GACGAGTACCACCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCACGGCGCGGGACTGGCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp AGCGGGTGGGAGGCTCAGGCACCGCGGGCTGCAGGTCCCGAGCCCTaGCCCGCGGGAAGGCAGCTAAGGCCCAGCGAGAAATCAAGCACA +
Preference number: 1 (lower is better)
Translates to: SGWEAQAPRAAGPEP*PAGRQLRPSEKSST
Trigger: TGTGCTTGATTTCTCGCTGGGCCTTAGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCCTCCCACCCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp AAGGGGCTCCCCACAGTGCAGCGGTGGGCTGAAGGGCTCCTCAAGTaGCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAG +
Preference number: 1 (lower is better)
Translates to: KGLPTVQRWAEGLLK*RQSGSPGRGGAESE
Trigger: CTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCACTGTGGGGAGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp CATGCAGCCCCGGTTCCCGCTCGCGCCTCTCGCTCCACACCTCCCTaGAAGCTGAGGGAGCCTGCTCTGGCCTTGGCCAGCCCAGAAAGG +
Preference number: 1 (lower is better)
Translates to: HAAPVPARASRSTPP*KLREPALALASPER
Trigger: CCTTTCTGGGCTGGCCAAGGCCAGAGCAGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGCGAGAGGCGCGAGCGGGAACCGGGGCTGCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp CTAAGGCCCAGCGAGAAATCAAGCACAGCGCAGGTGGGCCGGCACTaGTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGC +
Preference number: 1 (lower is better)
Translates to: LRPSEKSSTAQVGRH*WGTQYTLCSRWPGC
Trigger: GCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCACCTGCGCTGTGCTTGATTTCTCGCTGGGCCTTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp AGGCCCAGCGAGAAATCAAGCACAGCGCAGGTGGGCCGGCACTGCTaGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAA +
Preference number: 1 (lower is better)
Translates to: RPSEKSSTAQVGRHC*GTQYTLCSRWPGCQ
Trigger: TTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCACCTGCGCTGTGCTTGATTTCTCGCTGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR TCA 90 bp CCCCCATCACCTTCCACTGAGGACATTATGGGGCCAGGATCAGAGTaGGGCAAGGGAGGCACTCAGGGCCGGCATGTGCCCAAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: PPSPSTEDIMGPGSE*GKGGTQGRHVPKRE
Trigger: CTCCCTCTTGGGCACATGCCGGCCCTGAGTGCCTCCCTTGCCTCACTCTGATCCTGGCCCCATAATGTCCTCAGTGGAAGGTGATGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp TTATGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTaGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGC +
Preference number: 1 (lower is better)
Translates to: LCTEGSSPASPECWP*RNSSDGRVMELSTG
Trigger: GCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 90 bp CAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCAGTaGTGGGCGGGTAATGGAGTTATCAACAGGCCTAAATGGAGAGTA +
Preference number: 1 (lower is better)
Translates to: QLPCLARVLALEEQQ*WAGNGVINRPKWRV
Trigger: TACTCTCCATTTAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 90 bp CCCCATGCCAGCCTCGCTCGCTGCCAAGCCAAGCCCCGACAAAGATaGGCATGGGCACAGCAGGTCAAACAGAATCTATTGGTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: PHASLARCQAKPRQR*AWAQQVKQNLLVPV
Trigger: CACTGGCACCAATAGATTCTGTTTGACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTTGGCTTGGCAGCGAGCGAGGCTGGCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 90 bp CCCTTCAAATTATGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTaGTGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTA +
Preference number: 1 (lower is better)
Translates to: PFKLCTEGSSPASPE*WPWRNSSDGRVMEL
Trigger: TAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACATAATTTGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp CCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTaGGGACCCAACTGGGACCCTCCATGCTGCTGTTCCAATTGGGGC +
Preference number: 1 (lower is better)
Translates to: PCLWKFPLSCPWGAR*GPNWDPPCCCSNWG
Trigger: GCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp AGGGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATaGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: RVCLPCLWKFPLSCP*GARWGPNWDPPCCC
Trigger: ACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp TTCAAATTATGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTaGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCA +
Preference number: 1 (lower is better)
Translates to: FKLCTEGSSPASPEC*PWRNSSDGRVMELS
Trigger: TGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACATAATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 90 bp ATAAAGAGGGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGC +
Preference number: 1 (lower is better)
Translates to: IKRVCLPCLWKFPLS*PWGARWGPNWDPPC
Trigger: GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCTCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 90 bp AAAAGGGAGCAGCAGATGGCACCAGGTGACCACATCTGCAGCAGCTaGCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTC +
Preference number: 1 (lower is better)
Translates to: KREQQMAPGDHICSS*LNEPFMPSRLASLV
Trigger: GACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGGTGCCATCTGCTGCTCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 90 bp GAAAAGTGGAAAAGGGAGCAGCAGATGGCACCAGGTGACCACATCTaGAGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCC +
Preference number: 1 (lower is better)
Translates to: EKWKREQQMAPGDHI*SSCLNEPFMPSRLA
Trigger: GGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGGTGCCATCTGCTGCTCCCTTTTCCACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATaGCAAGAGCTAGCCAGAAAACAGCGAGTGATCCGGGACTTGGGG +
Preference number: 1 (lower is better)
Translates to: QNLLVPVGNFRLRWR*QELARKQRVIRDLG
Trigger: CCCCAAGTCCCGGATCACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 90 bp ATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTaGTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCCATTC +
Preference number: 1 (lower is better)
Translates to: IHALTSCQSCHHWHL*SGRKSFLCPLSTPF
Trigger: GAATGGAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp CCCGACAAAGATGAGCATGGGCACAGCAGGTCAAACAGAATCTATTaGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGC +
Preference number: 1 (lower is better)
Translates to: PDKDEHGHSRSNRIY*CQWATLGSDGDAKS
Trigger: GCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGACCTGCTGTGCCCATGCTCATCTTTGTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 90 bp GTCAAACAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATaGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTGATCCGGGAC +
Preference number: 1 (lower is better)
Translates to: VKQNLLVPVGNFRLR*RCQELARKQRVIRD
Trigger: GTCCCGGATCACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp GCACGTTGGGGACCCAACTGGGACCCTCCATGCTGCTGTTCCAATTaGGGCCTCATATTTCTTTATACAAAAGTCATGGGACTTGAGGAA +
Preference number: 1 (lower is better)
Translates to: ARWGPNWDPPCCCSN*GLIFLYTKVMGLEE
Trigger: TTCCTCAAGTCCCATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
3UTR CCA 90 bp ACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTaGAGTGAGATGCCCACCTATAGATACAGGCAGATTACAGAGGTT +
Preference number: 1 (lower is better)
Translates to: TVAWIEGQREAGLLW*SEMPTYRYRQITEV
Trigger: AACCTCTGTAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp AAGACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTaGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTACAGAG +
Preference number: 1 (lower is better)
Translates to: KTVAWIEGQREAGLL*WSEMPTYRYRQITE
Trigger: CTCTGTAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 90 bp TTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCCTTGTaGAGCCTTCTGTCTTGGAATCTGAACAAGCAAGAGTCTGAGCAT +
Preference number: 1 (lower is better)
Translates to: LTWEGEMPIFQALAL*SLLSWNLNKQESEH
Trigger: ATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 90 bp CCATTTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAATGGA +
Preference number: 1 (lower is better)
Translates to: PFSRRWPCEAFCLGI*TSKSLSISFPYQNG
Trigger: TCCATTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 90 bp AATCTGAACAAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAATaGAGACACAACTCAGCCCTAGTCCCATCCCTTTTGCTTGCAGCT +
Preference number: 1 (lower is better)
Translates to: NLNKQESEHILSLSK*RHNSALVPSLLLAA
Trigger: AGCTGCAAGCAAAAGGGATGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp GGCTCAGGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTTGCCAAGTCCCTCACTaGCCGGGGCCGGAAGGGCCG +
Preference number: 2 (lower is better)
Translates to: GSGTAGCRSRALPRGKAACQVPH*PGPEGP
Trigger: CGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCA...AGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGTACTCGTCGGGGAGGCTCGGGCCCCACAGGAGCCCATGGAGCGGGTGGGAGAGCCGCTGGCCCGGGTaGCAAGTCCCTCACTGCCCG +
Preference number: 2 (lower is better)
Translates to: WYSSGRLGPHRSPWSGWESRWPG*QVPHCP
Trigger: CGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCT...CTCCCACCCGCTCCATGGGCTCCTGTGGGGCCCGAGCCTCCCCGACGAGTACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGTACTCGTCGGGGAGGCTCGGGCCCCACAGGAGCCCATGGAGCGGGTGGGAGGGCCCGCCAAGCCCATaGCCACCCGGAACTCCAGCT +
Preference number: 2 (lower is better)
Translates to: WYSSGRLGPHRSPWSGWEGPPSP*PPGTPA
Trigger: AGCTGGAGTTCCGGGTGGGCATGGGCTTGGCGGGCC...CTCCCACCCGCTCCATGGGCTCCTGTGGGGCCCGAGCCTCCCCGACGAGTACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR TCA 90 bp CCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAGGGCCAGGATCAGAGTaGGGCAAGGGAGGCACTCAG +
Preference number: 2 (lower is better)
Translates to: PALLGDPVHPLQPLARVPGPGSE*GKGGTQ
Trigger: CTGAGTGCCTCCCTTGCCTCACTCTGATCCTGGCCC...TGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CAA 90 bp TCTCGCTCCACACCTCCCTGCAAGCTGAGGGAGCCTGCTCTGGCCTaGGCCAGCCCAGAAAGGGGCTCCCCACAGTGCAGCGGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SRSTPPCKLREPALA*ASPERGSPQCSGGL
Trigger: CAGCCCACCGCTGCACTGTGGGGAGCCCCTTTCTGGGCTGGCCAAGGCCAGAGCAGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp GGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTAAGGCCCCACTGAGGACATTATaGGGCCAGGATCAGAGTGAG +
Preference number: 2 (lower is better)
Translates to: GTAGCRSRALPRGKAAKAPLRTL*GQDQSE
Trigger: CTCACTCTGATCCTGGCCCCATAATGTCCTCAGTGG...GGCCTTAGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGACCATGGGGAGCACGTTaGGGACCCAACTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: LKCRQSGSPGRGGAESERPWGAR*GPNWDP
Trigger: AGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGG...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGACCATTGTCTTGCCCATaGGGAGCACGTTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: LKCRQSGSPGRGGAESERPLSCP*GARWGP
Trigger: GGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR TCA 90 bp TGCGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCCTGGAGGAACAGCAGTaGTGGGCGGGTAATGGAGTT +
Preference number: 2 (lower is better)
Translates to: CARTPQPLGGRWDWAPWSLEEQQ*WAGNGV
Trigger: AACTCCATTACCCGCCCATCACTGCTGTTCCTCCAG...GCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp GTTGCCAATGCTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCAGCCCATGGAGCGGGTaGGAGGCTCAGGCACCGCGG +
Preference number: 2 (lower is better)
Translates to: VANAGSGSLLLFSYLAPPSPWSG*EAQAPR
Trigger: CCGCGGTGCCTGAGCCTCCCACCCGCTCCATGGGCT...GGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR TCA 90 bp CTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGTGGTACTCAGGCGTTGGCCTTGTaGAGCCTTCTGTCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: LSPWVVDGTGRPGAGGGTQALAL*SLLSWN
Trigger: ATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTG...AGTACCACCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGTACTCGTCGGGGAGGCTCGGGCCCCACAGGAGCCCATGGAGCGGGTGGGAGTCTTCTATTTCCTCATaGTTGGCAGTCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: WYSSGRLGPHRSPWSGWESSISS*LAVPFP
Trigger: TGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGA...CTCCCACCCGCTCCATGGGCTCCTGTGGGGCCCGAGCCTCCCCGACGAGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGCGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCATCCGGGACTTGGGGTaGAAGGAGGACATAGAAAAG +
Preference number: 2 (lower is better)
Translates to: CARTPQPLGGRWDWAPWSIRDLG*KEDIEK
Trigger: CTTTTCTATGTCCTCCTTCCACCCCAAGTCCCGGAT...GCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp CTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGTGGTACTCCCAGCTTGGGGAAATaGACAGAGAAGACTGTTGCA +
Preference number: 2 (lower is better)
Translates to: LSPWVVDGTGRPGAGGGTPSLGK*TEKTVA
Trigger: TGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGG...AGTACCACCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCCCATTTTCCAGGCGTTaGCCTTGTGAAGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: CTEGSSPASPECWPWRNSPFSRR*PCEAFC
Trigger: ACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGG...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp GGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTGCAACTTTAGGCTCAGATaGAGATGCCAAGAGCTAGCC +
Preference number: 2 (lower is better)
Translates to: GTQYTLCSRWPGCQVPHCNFRLR*RCQELA
Trigger: GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTT...GCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR TCA 90 bp ACAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGTTGCCAATGCTGGCTCGCAGCAGCTGCCTGAATaGACCATTCATGCCCTCACG +
Preference number: 2 (lower is better)
Translates to: TKLPQRGRGPERVANAGSQQLPE*TIHALT
Trigger: CGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTG...CGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp CTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCCCTGCCTCGCCCGAGTaGTGGCCCTGGAGGAACAGC +
Preference number: 2 (lower is better)
Translates to: LLVPVGNFRLRWRCQELAPASPE*WPWRNS
Trigger: GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGG...GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR TCA 90 bp TGCAGCGGTGGGCTGAAGGGCTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCATTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: CSGGLKGSSSAAKVGAQAFCLGI*TSKSLS
Trigger: GCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAA...TGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGCAGCGGTGGGCTGAAGGGCTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAAACAGAATCTATTGGTaGCAGTGGGCAACTTTAGGC +
Preference number: 2 (lower is better)
Translates to: CSGGLKGSSSAAKVGAQANRIYW*QWATLG
Trigger: GCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTT...TGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp ACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCCCATGGGGAGCACGTTaGGGACCCAACTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: TIGTCAQGVSPSCVHCLLPWGAR*GPNWDP
Trigger: AGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGG...GAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp AGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCCCCGAGTGCTGGCCCTaGAGGAACAGCAGTGATGGG +
Preference number: 2 (lower is better)
Translates to: SSCLNEPFMPSRLASLVTPECWP*RNSSDG
Trigger: CCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGG...GGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGGGCAGCCCTGGGGTCTaGGCTGGGCTGGCTAATGTT +
Preference number: 2 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKGSPGV*AGLANV
Trigger: AACATTAGCCAGCCCAGCCCAGACCCCAGGGCTGCC...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 90 bp AATAAAGAGGGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTaGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATG +
Preference number: 2 (lower is better)
Translates to: NKEGLPSLLVEVSIV*PMGSTLGTQLGPSM
Trigger: CATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCTCTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR TCA 90 bp AAGATTTATTGCAAAGAACAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGAAGCCCCGACAAAGATaGGCATGGGCACAGCAGGTC +
Preference number: 2 (lower is better)
Translates to: KIYCKEQSSHSVEGDPSEKPRQR*AWAQQV
Trigger: GACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTT...CTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGTTCTTTGCAATAAATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAATAGTAGGCACTCCTTaGCATTTCATTCTCAAAATA +
Preference number: 2 (lower is better)
Translates to: LKCRQSGSPGRGGAESERIVGTP*HFILKI
Trigger: TATTTTGAGAATGAAATGCCAAGGAGTGCCTACTAT...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CAA 90 bp TGTTCAATAAAGAGGGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATaGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: CSIKRVCLPCLWKFP*SCPWGARWGPNWDP
Trigger: AGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR TCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCCAGAAAACAGCGAGTaGTCCGGGACTTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQEPENSE*SGTWGG
Trigger: TCCACCCCAAGTCCCGGATCACTCGCTGTTTTCTGG...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTAAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGG +
Preference number: 2 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLKFPLS*PWGARW
Trigger: CCAACGTGCTCCCCATGGGCAAGACAATGGAAACTT...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATCCCATCCCTTTTGCTTaGAGCTTCCAGAGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHPIPFA*SFQSSG
Trigger: GCCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGG...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGACGTTGGGGACCCAACTaGGACCCTCCATGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: FPGVGLVKPSVLESEQARRWGPN*DPPCCC
Trigger: ACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACG...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCGCTGGGCTCCTTTGGTaGAGTGAGATGCCCACCTAT +
Preference number: 2 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGAGLLW*SEMPTY
Trigger: ATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGC...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR TCA 90 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: WIEGQREAGLLWWSEMPTFCLGI*TSKSLS
Trigger: GCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAA...GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGAACTGGGACCCTCCATaGTGCTGTTCCAATTGGGGC +
Preference number: 2 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLNWDPP*CCSNWG
Trigger: GCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTT...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTCAATAAAGAGGGTTTaGCTTCCCTGCTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: WIEGQREAGLLWWSEMPTSIKRV*LPCLWK
Trigger: CTTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGA...GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp ACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCGGGTCTGGGCTGGGCTaGCTAATGTTCAATAAAGAG +
Preference number: 2 (lower is better)
Translates to: TIGTCAQGVSPSCVHCLLGSGLG*LMFNKE
Trigger: CTCTTTATTGAACATTAGCCAGCCCAGCCCAGACCC...GAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 90 bp CAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTaGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGG +
Preference number: 2 (lower is better)
Translates to: QSCHHWHLCSGRKSF*CPLSTPFLELAYSR
Trigger: CCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGAAACTGGGACCCTCCATaGTGCTGTTCCAATTGGGGC +
Preference number: 2 (lower is better)
Translates to: FPGVGLVKPSVLESEQARNWDPP*CCSNWG
Trigger: GCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTT...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp AGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCTCTTCTATTTCCTCATaGTTGGCAGTCCCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SSCLNEPFMPSRLASLVTSSISS*LAVPFP
Trigger: TGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGA...GGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAGGGTCTGGGCTGGGCTaGCTAATGTTCAATAAAGAG +
Preference number: 2 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRGSGLG*LMFNKE
Trigger: CTCTTTATTGAACATTAGCCAGCCCAGCCCAGACCC...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCGCAGTCCCCTTCCCATaGAGAATCTCTGTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGAVPFP*RISVSL
Trigger: TAAGGACACAGAGATTCTCCATGGGAAGGGGACTGC...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGACTATTTCCTCATGCTTaGCAGTCCCCTTCCCATGGA +
Preference number: 2 (lower is better)
Translates to: VGNFRLRWRCQELARKQRLFPHA*QSPSHG
Trigger: TCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAG...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp AAGATTTATTGCAAAGAACAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGCCATTTTCCAGGCGTTaGCCTTGTGAAGCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: KIYCKEQSSHSVEGDPSEPFSRR*PCEAFC
Trigger: ACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGG...CTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGTTCTTTGCAATAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CCA 90 bp TCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATTTCATTCTGAGGCTGGGCTCCTTTaGTGGAGTGAGATGCCCACC +
Preference number: 2 (lower is better)
Translates to: STPFLELAYSRHSLAFHSEAGLL*WSEMPT
Trigger: GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTC...AGAATGAAATGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCACATCCTGCTTATCTATTGGTGCCAGTaGGCAACTTTAGGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: WLGQPAFILLSGPTHILLIYWCQ*ATLGSD
Trigger: ATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGAT...AAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR TCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCCAGAGCTCAGGCCCCTaGATCTTCTATTTCCTCATG +
Preference number: 2 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGQSSGP*IFYFLM
Trigger: CATGAGGAAATAGAAGATTCAGGGGCCTGAGCTCTG...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCAGCAGTCCCCTTCCCATaGAGAATCTCTGTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: CPLSTPFLELAYSRHSLAAVPFP*RISVSL
Trigger: TAAGGACACAGAGATTCTCCATGGGAAGGGGACTGC...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCCTATTTCCTCATGCTTaGCAGTCCCCTTCCCATGGA +
Preference number: 2 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGLFPHA*QSPSHG
Trigger: TCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAG...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR TCA 90 bp ACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCGAACAAGCAAGAGTCTaGGCATATCCTTTCCTTATC +
Preference number: 2 (lower is better)
Translates to: TIGTCAQGVSPSCVHCLLEQARV*AYPFLI
Trigger: GATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTC...GAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGG +
Preference number: 2 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHKFPLS*PWGARW
Trigger: CCAACGTGCTCCCCATGGGCAAGACAATGGAAACTT...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGTCAATAAAGAGGGTTTaGCTTCCCTGCTTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIESIKRV*LPCLWK
Trigger: CTTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGA...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCCTTTCCTTATCAAAATaGAGACACAACTCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFLSLSK*RHNSAL
Trigger: TAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAG...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGAGGGTTTGCCTTCCCTaGTTGTGGAAGTTTCCATTG +
Preference number: 2 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLRVCLP*LWKFPL
Trigger: CAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCT...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACAGGGTTTGCCTTCCCTaGTTGTGGAAGTTTCCATTG +
Preference number: 2 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHRVCLP*LWKFPL
Trigger: CAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCT...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGATGCCTTCCCTGCTTGTaGAAGTTTCCATTGTCTTGC +
Preference number: 2 (lower is better)
Translates to: FPGVGLVKPSVLESEQARCLPCL*KFPLSC
Trigger: GCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCA...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR GCA 90 bp CTGTCTTGGAATCTGAACAAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAATGGGACCCTCCATGCTaGTGTTCCAATTGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LSWNLNKQESEHILSLSKWDPPC*CSNWGL
Trigger: GAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCA...TTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
3UTR GCA 72 bp CTCTGCAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTaGCCGGGGCCGGAAGGGCCGGCCGGCTGCTCCGAG +
Preference number: 3 (lower is better)
Translates to: LCSRWPGCQVPH*PGPEGPAGCSE
Trigger: CTCGGAGCAGCCGGCCGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CCCATGGAGCGGGTGGGAGGCTCAGGCACCGCGGGCTaGAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: PMERVGGSGTAG*RSRALPRGKAA
Trigger: AGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCCTCCCACCCGCTCCATGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CGGCCGGCTGCTCCGAGTGCAGGCCCGCCAAGCCCATaGCCACCCGGAACTCCAGCTGGCCCGCAAGCGCTG +
Preference number: 3 (lower is better)
Translates to: RPAAPSAGPPSP*PPGTPAGPQAL
Trigger: CAGCGCTTGCGGGCCAGCTGGAGTTCCGGGTGGGCATGGGCTTGGCGGGCCTGCACTCGGAGCAGCCGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp GGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTaGCAAGTCCCTCACTGCCCGGGGCCGGAAGGGCCG +
Preference number: 3 (lower is better)
Translates to: GTQYTLCSRWPG*QVPHCPGPEGP
Trigger: CGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp AGTGGATCCCGCACCGGGGCTGCAGGTGGAGCTGCCTaGCAGTCCCGCGCCGTGCGCTCGCACTCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: SGSRTGAAGGAA*QSRAVRSHSSA
Trigger: GGCTGAGGAGTGCGAGCGCACGGCGCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp CACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTaGCCCGGGTGCCAAGTCCCTCACTGCCCGGGGCCG +
Preference number: 3 (lower is better)
Translates to: HCWGTQYTLCSR*PGCQVPHCPGP
Trigger: CGGCCCCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp TCCCGCGCCGTGCGCTCGCACTCCTCAGCCCTTGGGTaGTCGATGGGACTGGGCGCCCTGGAGCAGGGGGTG +
Preference number: 3 (lower is better)
Translates to: SRAVRSHSSALG*SMGLGALEQGV
Trigger: CACCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCACGGCGCGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp GTGGGCCGGCACTGCTGGGGGACCCAGTACACCCTCTaGAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTGC +
Preference number: 3 (lower is better)
Translates to: VGRHCWGTQYTL*SRWPGCQVPHC
Trigger: GCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp CCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTaGAGCAGGGGGTGGTACTCGTCGGGGAGGCTCGGG +
Preference number: 3 (lower is better)
Translates to: PQPLGGRWDWAP*SRGWYSSGRLG
Trigger: CCCGAGCCTCCCCGACGAGTACCACCCCCTGCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CCGGTTCCCGCTCGCGCCTCTCGCTCCACACCTCCCTaGAAGCTGAGGGAGCCTGCTCTGGCCTTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: PVPARASRSTPP*KLREPALALAS
Trigger: GCTGGCCAAGGCCAGAGCAGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGCGAGAGGCGCGAGCGGGAACCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CCCACAGTGCAGCGGTGGGCTGAAGGGCTCCTCAAGTaGCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: PTVQRWAEGLLK*RQSGSPGRGGA
Trigger: GGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCACTGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CTGGCCTTGGCCAGCCCAGAAAGGGGCTCCCCACAGTaGAGCGGTGGGCTGAAGGGCTCCTCAAGTGCCGCC +
Preference number: 3 (lower is better)
Translates to: LALASPERGSPQ*SGGLKGSSSAA
Trigger: GGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCACTGTGGGGAGCCCCTTTCTGGGCTGGCCAAGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CTCTCGCTCCACACCTCCCTGCAAGCTGAGGGAGCCTaGTCTGGCCTTGGCCAGCCCAGAAAGGGGCTCCCC +
Preference number: 3 (lower is better)
Translates to: LSLHTSLQAEGA*SGLGQPRKGLP
Trigger: GGGGAGCCCCTTTCTGGGCTGGCCAAGGCCAGAGCAGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp GACTCTCCACGTCCCCATCAGACTCAGGAGCCCAGCTaGCTTCACCTAGTGGATCCCGCACCGGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: DSPRPHQTQEPS*LHLVDPAPGLQ
Trigger: CTGCAGCCCCGGTGCGGGATCCACTAGGTGAAGCCAGCTGGGCTCCTGAGTCTGATGGGGACGTGGAGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CAA 90 bp GAGGAGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCTCCCATCCCTTTTGCTaGCAGCTTCCAGAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: EEAPRASEGCEDCQHAVTSHPFC*QLPELR
Trigger: CCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGGA...GGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp TTATGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTaGTGGCCCTGGAGGAACAGCAGTGATGGGCGGGTA +
Preference number: 3 (lower is better)
Translates to: LCTEGSSPASPE*WPWRNSSDGRV
Trigger: TACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp GAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTaGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTA +
Preference number: 3 (lower is better)
Translates to: EGSSPASPECWP*RNSSDGRVMEL
Trigger: TAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 72 bp CCTTCCACTGAGGACATTATGGGGCCAGGATCAGAGTaGGGCAAGGGAGGCACTCAGGGCCGGCATGTGCCC +
Preference number: 3 (lower is better)
Translates to: PSTEDIMGPGSE*GKGGTQGRHVP
Trigger: GGGCACATGCCGGCCCTGAGTGCCTCCCTTGCCTCACTCTGATCCTGGCCCCATAATGTCCTCAGTGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 72 bp GTGCCCCTTCAAATTATGTACCGAAGGCAGCTCCCCTaGCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCAG +
Preference number: 3 (lower is better)
Translates to: VPLQIMYRRQLP*LARVLALEEQQ
Trigger: CTGCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACATAATTTGAAGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CAA 90 bp AGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCCCTCGTGAAGCCTTCTGTCTaGGAATCTGAACAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: RRRERARAVRTASTLSPLVKPSV*ESEQAR
Trigger: TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCAC...GAGGGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp AAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGTTaGCAATGCTGGCTCGGGCAGCCTGCTTTTATTCTC +
Preference number: 3 (lower is better)
Translates to: KAPTAWKGTRAS*QCWLGQPAFIL
Trigger: GAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp GACCCGAGCGAGTTGCCAATGCTGGCTCGGGCAGCCTaGTTTTATTCTCTTATCTGGCCCCACCCACATCCT +
Preference number: 3 (lower is better)
Translates to: DPSELPMLARAA*FYSLIWPHPHP
Trigger: AGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACTCGCTCGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CCCACAGCGTGGAAGGGGACCCGAGCGAGTTGCCAATaGTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCT +
Preference number: 3 (lower is better)
Translates to: PTAWKGTRASCQ*WLGQPAFILLS
Trigger: AGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp CTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATaGGGAGCACGTTGGGGACCCAACTGGGACCCTCCA +
Preference number: 3 (lower is better)
Translates to: LPCLWKFPLSCP*GARWGPNWDPP
Trigger: TGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp ACAGCGTGGAAGGGGACCCGAGCGAGTTGCCAATGCTaGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGC +
Preference number: 3 (lower is better)
Translates to: TAWKGTRASCQC*LGQPAFILLSG
Trigger: GCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CAA 90 bp TGCGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCTATAGTAGGCACTCCTaGGCATTTCATTCTCAAAAT +
Preference number: 3 (lower is better)
Translates to: CARTPQPLGGRWDWAPWSYSRHS*AFHSQN
Trigger: ATTTTGAGAATGAAATGCCAAGGAGTGCCTACTATA...GCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp GTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGGGGACCCAACTGGGAC +
Preference number: 3 (lower is better)
Translates to: VCLPCLWKFPLS*PWGARWGPNWD
Trigger: GTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 72 bp CAGCAGATGGCACCAGGTGACCACATCTGCAGCAGCTaGCTGAATGAACCATTCATGCCCTCACGTCTTGCC +
Preference number: 3 (lower is better)
Translates to: QQMAPGDHICSS*LNEPFMPSRLA
Trigger: GGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGGTGCCATCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 72 bp AGCCTCGCTCGCTGCCAAGCCAAGCCCCGACAAAGATaGGCATGGGCACAGCAGGTCAAACAGAATCTATTG +
Preference number: 3 (lower is better)
Translates to: SLARCQAKPRQR*AWAQQVKQNLL
Trigger: CAATAGATTCTGTTTGACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTTGGCTTGGCAGCGAGCGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp CTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTaGTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCT +
Preference number: 3 (lower is better)
Translates to: LTSCQSCHHWHL*SGRKSFLCPLS
Trigger: AGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 72 bp AAAAGGGAGCAGCAGATGGCACCAGGTGACCACATCTaGAGCAGCTGCCTGAATGAACCATTCATGCCCTCA +
Preference number: 3 (lower is better)
Translates to: KREQQMAPGDHI*SSCLNEPFMPS
Trigger: TGAGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGGTGCCATCTGCTGCTCCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR GCA 72 bp TTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATaGCAAGAGCTAGCCAGAAAACAGCGAGTGATCCGG +
Preference number: 3 (lower is better)
Translates to: LVPVGNFRLRWR*QELARKQRVIR
Trigger: CCGGATCACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp TCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATaGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: SSISSCLAVPFP*RISVSLGSPGV
Trigger: GACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp GCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTaGTGGAGTGAGATGCCCACCTATAGATACAGGCAG +
Preference number: 3 (lower is better)
Translates to: AWIEGQREAGLL*WSEMPTYRYRQ
Trigger: CTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp GCAAGATTTATTGCAAAGAACAAAGCTCCCACAGCGTaGAAGGGGACCCGAGCGAGTTGCCAATGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: ARFIAKNKAPTA*KGTRASCQCWL
Trigger: GAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGTTCTTTGCAATAAATCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR GCA 72 bp GGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCTaGTGTTCCAATTGGGGCCTCATATTTCTTTATACA +
Preference number: 3 (lower is better)
Translates to: GARWGPNWDPPC*CSNWGLIFLYT
Trigger: TGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
3UTR GCA 72 bp GAGCATGGGCACAGCAGGTCAAACAGAATCTATTGGTaGCAGTGGGCAACTTTAGGCTCAGATGGAGATGCC +
Preference number: 3 (lower is better)
Translates to: EHGHSRSNRIYW*QWATLGSDGDA
Trigger: GGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGACCTGCTGTGCCCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp ATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTaGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: IHALTSCQSCHH*HLCSGRKSFLC
Trigger: ACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp GGGCACAGCAGGTCAAACAGAATCTATTGGTGCCAGTaGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: GHSRSNRIYWCQ*ATLGSDGDAKS
Trigger: GCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGACCTGCTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CCA 72 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTaGAGTGAGATGCCCACCTATAGATACAGGCAGATT +
Preference number: 3 (lower is better)
Translates to: WIEGQREAGLLW*SEMPTYRYRQI
Trigger: AATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CAA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAGTTTGCCTTCCCTGCTaGTGGAAGTTTCCATTGTCT +
Preference number: 3 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRVCLPC*WKFPLS
Trigger: AGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CAA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTTTGCCTTCCCTGCTaGTGGAAGTTTCCATTGTCT +
Preference number: 3 (lower is better)
Translates to: VGNFRLRWRCQELARKQRVCLPC*WKFPLS
Trigger: AGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp AATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATaGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTG +
Preference number: 3 (lower is better)
Translates to: NLLVPVGNFRLR*RCQELARKQRV
Trigger: CACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp GATGAGCATGGGCACAGCAGGTCAAACAGAATCTATTaGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGAT +
Preference number: 3 (lower is better)
Translates to: DEHGHSRSNRIY*CQWATLGSDGD
Trigger: ATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGACCTGCTGTGCCCATGCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR-3UTR CAA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGTTCAATAAAGAGGGTTaGCCTTCCCTGCTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKFNKEG*PSLLVE
Trigger: TTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAA...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CAA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGATTCAATAAAGAGGGTTaGCCTTCCCTGCTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRFNKEG*PSLLVE
Trigger: TTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAA...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR-3UTR CAA 90 bp TCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATTTCATTCTGAAGTTTCCATTGTCTaGCCCATGGGGAGCACGTTG +
Preference number: 3 (lower is better)
Translates to: STPFLELAYSRHSLAFHSEVSIV*PMGSTL
Trigger: CAACGTGCTCCCCATGGGCAAGACAATGGAAACTTC...AGAATGAAATGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR TCA 72 bp AGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGCATATCCTTTCCTTAT +
Preference number: 3 (lower is better)
Translates to: RRWPCEAFCLGI*TSKSLSISFPY
Trigger: ATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CCA 72 bp AAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAATaGAGACACAACTCAGCCCTAGTCCCATCCCTTTTG +
Preference number: 3 (lower is better)
Translates to: KQESEHILSLSK*RHNSALVPSLL
Trigger: CAAAAGGGATGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp GGCTCAGGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTCGCTCCACACCTCCCTaGAAGCTGAGGGAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GSGTAGCRSRALPRGKAARSTPP*KLREPA
Trigger: AGCAGGCTCCCTCAGCTTGCAGGGAGGTGTGGAGCG...AGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTAAGGCCCCAGAAAACAGCGAGTaGTCCGGGACTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GTAGCRSRALPRGKAAKAPENSE*SGTWGG
Trigger: TCCACCCCAAGTCCCGGATCACTCGCTGTTTTCTGG...GGCCTTAGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCACCCGAGTGCTGGCCCTaGAGGAACAGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: PALLGDPVHPLQPLARVPPECWP*RNSSDG
Trigger: CCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGG...TGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCTCAGGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTCTGGAGGAACAGCAGTaGTGGGCGGGTAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: GSGTAGCRSRALPRGKAALEEQQ*WAGNGV
Trigger: AACTCCATTACCCGCCCATCACTGCTGTTCCTCCAG...AGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCCTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp GGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTAAGGCCACAGGGCTTTGGCGTTaGCCTTCAGGCTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GTAGCRSRALPRGKAAKATGLWR*PSGSCE
Trigger: CTCACAAGAGCCTGAAGGGCAACGCCAAAGCCCTGT...GGCCTTAGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAGAGGCTGGGCTCCTTTaGTGGAGTGAGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: PALLGDPVHPLQPLARVPEAGLL*WSEMPT
Trigger: GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTC...TGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAGCCAGCCTCGCTCGCTaGCAAGCCAAGCCCCGACAA +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERASLAR*QAKPRQ
Trigger: TTGTCGGGGCTTGGCTTGGCAGCGAGCGAGGCTGGC...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCGCAGGTGGAGCTGCCTaGCAGTCCCGCGCCGTGCGC +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCAGGAA*QSRAVR
Trigger: GCGCACGGCGCGGGACTGGCAGGCAGCTCCACCTGC...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTGCCCGGTATACCCGCTGCCTCTaGTCAGGGACACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSTPSAAAGPGAKSLTARYTRCL*SGTPSR
Trigger: CCTGGAAGGTGTCCCTGAGCAGAGGCAGCGGGTATA...CCGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp GAGGAGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCCGTTGGGGACCCAACTaGGACCCTCCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EEAPRASEGCEDCQHAVTRWGPN*DPPCCC
Trigger: ACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACG...GGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCACAGTCTTGTCACCATTaGCACCTGTGCTCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: PALLGDPVHPLQPLARVPQSCHH*HLCSGR
Trigger: ACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTG...TGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCAGGTCAGCAGCAGGATaGGGCCTCGGAACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSRSAAG*GLGTSC
Trigger: ACAGCTGGTTCCGAGGCCTCATCCTGCTGCTGACCT...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GAGGAGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCAAGCCCCGACAAAGATaGGCATGGGCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: EEAPRASEGCEDCQHAVTKPRQR*AWAQQV
Trigger: GACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTT...GGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp AGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCCCTCGGCCAGCCTGTGGTCTaGACGAGTCCATTACAGACC +
Preference number: 4 (lower is better)
Translates to: RRRERARAVRTASTLSPLGQPVV*TSPLQT
Trigger: GGTCTGTAATGGACTCGTCCAGACCACAGGCTGGCC...GAGGGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCAGCGGTGGGCTGAAGGGCTCCTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAACTCGACCACGCCTaGGATCCGGAGCGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: CSGGLKGSSSAAKVGAQAELDHA*DPERPK
Trigger: TTTGGGGCGCTCCGGATCCCAGGCGTGGTCGAGTTC...TGCCTGGGCTCCCACTTTGGCGGCACTTGAGGAGCCCTTCAGCCCACCGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp ACAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGTTGCCAATGCTGGCTCGCACCTCCCTGCAAGCTaGGGGAGCCTGCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TKLPQRGRGPERVANAGSHLPAS*GSLLWP
Trigger: AGGCCAGAGCAGGCTCCCTCAGCTTGCAGGGAGGTG...CGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CCGGCACTGCTGGGGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCACTATTTCCTCATGCTTaGCAGTCCCCTTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: PALLGDPVHPLQPLARVPLFPHA*QSPSHG
Trigger: TCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAG...TGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCAACGACAGGCCCCACTaGCCGTTCACCCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCNDRPH*PFTQMP
Trigger: CGGCATCTGGGTGAACGGGCAGTGGGGCCTGTCGTT...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CCTCGCTCGCTGCCAAGCCAAGCCCCGACAAAGATGAGCATGGGCACAGCAGGTCACTTCAGCACCCCATaGCAGCCTCGCTCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRSLPSQAPTKMSMGTAGHFSTP*QPRSLP
Trigger: TGGCAGCGAGCGAGGCTGGCATGGGGTGCTGAAGTG...ACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTTGGCTTGGCAGCGAGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCCTTCGCATGGCCCCTTaGAGCATTTGGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSLRMAP*SIWPQS
Trigger: AGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAG...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTAAGCCCGTGGGGGAGATaGGCCCAGCCAGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLSPWGR*AQPAEA
Trigger: GGCCTCTGCTGGCTGGGCTCATCTCCCCCACGGGCT...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGACAGGCGTTGGCCTTGTaGAGCCTTCTGTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERQALAL*SLLSWN
Trigger: ATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTG...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGATCTGCAGCAGCTGCCTaGATGAACCATTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERSAAAA*MNHSCP
Trigger: AGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGA...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCCATGCCCTCACGTCTTaGCAGTCTTGTCACCATTGG +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSHALTS*QSCHHW
Trigger: CCAATGGTGACAAGACTGGCAAGACGTGAGGGCATG...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCGGAACCAGCTGTCCCTaGAGAAGGCCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCGTSCP*RRPGRT
Trigger: GGTTCTTCCGGGCCTTCTCCAGGGACAGCTGGTTCC...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCTCGCTCGCTGCCAAGCCAAGCCCCGACAAAGATGAGCATGGGCACAGCAGGTCCATTGTCTTGCCCATaGGGAGCACGTTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PRSLPSQAPTKMSMGTAGPLSCP*GARWGP
Trigger: GGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG...ACCTGCTGTGCCCATGCTCATCTTTGTCGGGGCTTGGCTTGGCAGCGAGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp GGGACCCAGTACACCCTCTGCAGCCGCTGGCCCGGGTGCCAAGTCCCTCACTGCGCAGTCCCCTTCCCATaGAGAATCTCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GTQYTLCSRWPGCQVPHCAVPFP*RISVSL
Trigger: TAAGGACACAGAGATTCTCCATGGGAAGGGGACTGC...GCAGTGAGGGACTTGGCACCCGGGCCAGCGGCTGCAGAGGGTGTACTGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCGAGGCTGGGCTCCTTTaGTGGAGTGAGATGCCCACC +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCEAGLL*WSEMPT
Trigger: GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTC...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTCTGCGATGGCATAGGCGATaGGGAAGGCGTTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: GSPLPMENLCVLRQPWGLRWHRR*GRRCPR
Trigger: GCGTGGACAACGCCTTCCTCATCGCCTATGCCATCG...CAGACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCGAGCAGCATTCCAGCTaGGAGGTAGTAACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCEQHSS*EVVTER
Trigger: CCGCTCCGTTACTACCTCTCAGCTGGAATGCTGCTC...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCTTGATGGGTTTGATCTaGTCCGAGCAGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSLMGLI*SEQFWC
Trigger: GCACCAGAACTGCTCGGAGCAGATCAAACCCATCAA...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCCAGAGGGCCAGCCTGTaGTCTGGACGAGTCCATTAC +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCQRASL*SGRVHY
Trigger: GTAATGGACTCGTCCAGACCACAGGCTGGCCCTCTG...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TCAAGCACAGCGCAGGTGGGCCGGCACTGCTGGGGGACCCAGTACACCCTCTGCTTGCCCACAGATGTGTaGGAATTCCAGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: SSTAQVGRHCWGTQYTLCLPTDV*EFQMPM
Trigger: CATGGGCATCTGGAATTCCCACACATCTGTGGGCAA...GCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCACCTGCGCTGTGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp GGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTCTGCCGTGGACAGGGCTTTaGCGTTGCCCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSPLPMENLCVLRQPWGLPWTGL*RCPSGS
Trigger: AGAGCCTGAAGGGCAACGCCAAAGCCCTGTCCACGG...CAGACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCACATCCTGCTTCAAGCACAGCGCAGGTaGGCCGGCACTGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: WLGQPAFILLSGPTHILLQAQRR*AGTAGG
Trigger: TCCCCCAGCAGTGCCGGCCCACCTGCGCTGTGCTTG...AAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACCCCCACAGGAGCCCATaGAGCGGGTGGGAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNPHRSP*SGWEAQ
Trigger: CTGAGCCTCCCACCCGCTCCATGGGCTCCTGTGGGG...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAAGCCCGTGGGGGAGATaGGCCCAGCCAGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRSPWGR*AQPAEA
Trigger: GGCCTCTGCTGGCTGGGCTCATCTCCCCCACGGGCT...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAAGGCTCAGATGGAGATaGCAAGAGCTAGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERRLRWR*QELARK
Trigger: TTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCT...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTAAGCCGCTGGCCCGGGTaGCAAGTCCCTCACTGCCCG +
Preference number: 4 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLSRWPG*QVPHCP
Trigger: CGGGCAGTGAGGGACTTGGCACCCGGGCCAGCGGCT...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp ACAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGTTGCCAATGCTGGCTCGCTTCGCATGGCCCCTTaGAGCATTTGGCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: TKLPQRGRGPERVANAGSLRMAP*SIWPQS
Trigger: AGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAG...CGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGATGCCTTCCCTGCTTGTaGAAGTTTCCATTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERCLPCL*KFPLSC
Trigger: GCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCA...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp GCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGCCCGAGTGCTGGCCCTaGAGGAACAGCAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: AFPACGSFHCLAHGEHVGPECWP*RNSSDG
Trigger: CCCATCACTGCTGTTCCTCCAGGGCCAGCACTCGGG...CCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 72 bp CAAAGCTCCCACAGCGTGGAAGGGGACCCGAGCGAGTaGCCAATGCTGGCTCGGGCAGCCTGCTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: QSSHSVEGDPSE*PMLARAACFYS
Trigger: AGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAACTCGCTCGGGTCCCCTTCCACGCTGTGGGAGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp TCAAGCACAGCGCAGGTGGGCCGGCACTGCTGGGGGACCCAGTACACCCTCTGCTTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSTAQVGRHCWGTQYTLCFCLGI*TSKSLS
Trigger: GCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAA...GCAGAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCACCTGCGCTGTGCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCTCCGAGCAGTTCTGGTaGAGACGGCTCTTGACGATA +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCSEQFW*RRLLTI
Trigger: TATCGTCAAGAGCCGTCTGCACCAGAACTGCTCGGA...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCTCAATAAAGAGGGTTTaGCTTCCCTGCTTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSSIKRV*LPCLWK
Trigger: CTTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGA...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGCCTGCCTCGCCCGAGTaGTGGCCCTGGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIEPASPE*WPWRNS
Trigger: GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGG...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCAACAGAATCTATTGGTaGCAGTGGGCAACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSNRIYW*QWATLG
Trigger: GCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTT...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCAGCCGGCTGCTCCGAGTaGAGGCCCGCCAAGCCCATG +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLAAGCSE*RPAKPM
Trigger: CATGGGCTTGGCGGGCCTGCACTCGGAGCAGCCGGC...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGTGCCAAGTCCCTCACTaGCCGGGGCCGGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQECQVPH*PGPEGP
Trigger: CGGCCCTTCCGGCCCCGGGCAGTGAGGGACTTGGCA...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp TTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATTGGTGGCCCTGCCATTaGTGTAGTCAGAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: FHCLAHGEHVGDPTGTLHWWPCH*CSQRRA
Trigger: GGCTCGTCTCTGACTACACCAATGGCAGGGCCACCA...ATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACGGTGATGAGCGCGTATaGGCCATTGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNGDERV*AIDQAP
Trigger: GGGGGCCTGGTCAATGGCCCATACGCGCTCATCACC...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp ATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTACCATTGTCTTGCCCATaGGGAGCACGTTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: MPSRLASLVTIGTCAQGVPLSCP*GARWGP
Trigger: GGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG...TACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCAAAGGGAGCAGCAGATaGCACCAGGTGACCACATCT +
Preference number: 4 (lower is better)
Translates to: PLSCPWGARWGPNWDPPCKGSSR*HQVTTS
Trigger: AGATGTGGTCACCTGGTGCCATCTGCTGCTCCCTTT...GCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CTCAAGTGCCGCCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAATCTATTGGTGCCAGTaGGCAACTTTAGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: LKCRQSGSPGRGGAESERIYWCQ*ATLGSD
Trigger: ATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGAT...TCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCAGCCCATGGAGCGGGTaGGAGGCTCAGGCACCGCGG +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGSPWSG*EAQAPR
Trigger: CCGCGGTGCCTGAGCCTCCCACCCGCTCCATGGGCT...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCGAGCAGCATTCCAGCTaGGAGGTAGTAACGGAGCGG +
Preference number: 4 (lower is better)
Translates to: WIEGQREAGLLWWSEMPTEQHSS*EVVTER
Trigger: CCGCTCCGTTACTACCTCTCAGCTGGAATGCTGCTC...GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCCCCTTCAGGCTCTTGTaGGTCCCCAGATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WIEGQREAGLLWWSEMPTPFRLL*VPRSAE
Trigger: CTCTGCTGATCTGGGGACTCACAAGAGCCTGAAGGG...GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp ATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCGCCCGTTCACCCAGATaGCGGCGATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISSCLAVPFPWRISVSLGARSPR*RRSGSP
Trigger: TGGGCTCCCTGATCGCCGGCATCTGGGTGAACGGGC...GCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGCCCGTTCACCCAGATaGCGGCGATCAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIEARSPR*RRSGSP
Trigger: TGGGCTCCCTGATCGCCGGCATCTGGGTGAACGGGC...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACCGTTGGGGACCCAACTaGGACCCTCCATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNRWGPN*DPPCCC
Trigger: ACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACG...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCCAAGTGCCGCCAAAGTaGGAGCCCAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLVPVGNFRLRWRCQELAQVPPK*EPRQRR
Trigger: CCTCCTCTGCCTGGGCTCCCACTTTGGCGGCACTTG...GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp AGGCCCCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAAGCGCCCCAAAGAAGCTaGTGGCAGCAGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: RPLNLLFPHAWQSPSHGEAPQRS*WQQALR
Trigger: GCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCGC...TTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCCCAGAAAACAGCGAGTaGTCCGGGACTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFPENSE*SGTWGG
Trigger: TCCACCCCAAGTCCCGGATCACTCGCTGTTTTCTGG...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACGTCAGAGACGAGCCCTaGCACGATGCCGCCTATGAT +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNVRDEP*HDAAYD
Trigger: ATCATAGGCGGCATCGTGGCAGGGCTCGTCTCTGAC...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp ATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTACCCATCCCTTTTGCTTaGAGCTTCCAGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: MPSRLASLVTIGTCAQGVPIPFA*SFQSSG
Trigger: GCCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGG...TACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp GGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTGGAGGGCTGTGAGGACTaGCAGCACGCTGTCACCCCT +
Preference number: 4 (lower is better)
Translates to: GNFRLRWRCQELARKQRVEGCED*QHAVTP
Trigger: AGGGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTC...CACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCCAAGCTGAGGGAGCCTaGTCTGGCCTTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGQAEGA*SGLGQP
Trigger: GGGCTGGCCAAGGCCAGAGCAGGCTCCCTCAGCTTG...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGAGGCCCGCCAAGCCCATaGCCACCCGGAACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FPGVGLVKPSVLESEQARGPPSP*PPGTPA
Trigger: AGCTGGAGTTCCGGGTGGGCATGGGCTTGGCGGGCC...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACCAGGTGGGCCGGCACTaGTGGGGGACCCAGTACACC +
Preference number: 4 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHQVGRH*WGTQYT
Trigger: GGTGTACTGGGTCCCCCAGCAGTGCCGGCCCACCTG...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTCCTCAGGGTTGTCCTaGTTCTCAGCTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFSSGLS*FSAGSP
Trigger: CGGTGAGCCAGCTGAGAACCAGGACAACCCTGAGGA...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTATCCTCAGGGTTGTCCTaGTTCTCAGCTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLSSGLS*FSAGSP
Trigger: CGGTGAGCCAGCTGAGAACCAGGACAACCCTGAGGA...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTGGGTGATGAGCGCGTATaGGCCATTGACCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GNFRLRWRCQELARKQRVGDERV*AIDQAP
Trigger: GGGGGCCTGGTCAATGGCCCATACGCGCTCATCACC...CACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCCTTTCCTTATCAAAATaGAGACACAACTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSLSLSK*RHNSAL
Trigger: TAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAG...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 72 bp GGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTaGCCCATGGGGAGCACGTTGGGGACCCAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GLPSLLVEVSIV*PMGSTLGTQLG
Trigger: TCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTGAGGTCAGCAGCAGGATaGGGCCTCGGAACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GNFRLRWRCQELARKQRVRSAAG*GLGTSC
Trigger: ACAGCTGGTTCCGAGGCCTCATCCTGCTGCTGACCT...CACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGGCGCCCCAAAGAAGCTaGTGGCAGCAGGCTCTTCGC +
Preference number: 4 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLAPQRS*WQQALR
Trigger: GCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCGC...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GTTGCCAATGCTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCTGCACTCACAAACCCTaGGCTAGACACAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VANAGSGSLLLFSYLAPPCTHKP*ARHRVL
Trigger: CAACACCCTGTGTCTAGCTCAGGGTTTGTGAGTGCA...GGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACAACTGGGACCCTCCATaGTGCTGTTCCAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNNWDPP*CCSNWG
Trigger: GCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTT...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AACTCAGCCCTAGTCCCATCCCTTTTGCTTGCAGCTTCCAGAGCTCAGGCCCCTCATGCCCTCACGTCTTaGCAGTCTTGTCACCATTGG +
Preference number: 4 (lower is better)
Translates to: NSALVPSLLLAASRAQAPHALTS*QSCHHW
Trigger: CCAATGGTGACAAGACTGGCAAGACGTGAGGGCATG...AGGGGCCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGGACTAGGGCTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTACCGAAGGCAGCTCCCCTGCCTCGCCCGAGTGCTGGCCCTGGAGGAACAGCAGTAGCAAGATTTATTaGAAAGAACAAAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CTEGSSPASPECWPWRNSSSKIY*KEQSSH
Trigger: GTGGGAGCTTTGTTCTTTGCAATAAATCTTGCTACT...GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGGGGAGCTGCCTTCGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGAACCAGCTGTCCCTaGAGAAGGCCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIEGTSCP*RRPGRT
Trigger: GGTTCTTCCGGGCCTTCTCCAGGGACAGCTGGTTCC...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCTGCTCCGAGCAGTTCTaGTGCAGACGGCTCTTGACG +
Preference number: 4 (lower is better)
Translates to: SSCLNEPFMPSRLASLVTCSEQF*CRRLLT
Trigger: CGTCAAGAGCCGTCTGCACCAGAACTGCTCGGAGCA...GGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTCCTGGTTCTCAGCTaGCTCACCGTGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: HREDCCMDRGTKRGWAPLVLVLS*LTVVLR
Trigger: CCTCAGCACCACGGTGAGCCAGCTGAGAACCAGGAC...CAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGGAACTCGACCACGCCTaGGATCCGGAGCGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLELDHA*DPERPK
Trigger: TTTGGGGCGCTCCGGATCCCAGGCGTGGTCGAGTTC...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACGCATCACTATGGAGCTaGCAATCCCGTCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNASLWS*QSRPGQ
Trigger: TTGGCCAGGACGGGATTGCCAGCTCCATAGTGATGC...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCCATGGGGAGCACGTTaGGGACCCAACTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLPWGAR*GPNWDP
Trigger: AGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGG...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GGACATAAGGACTCTCCACGTCCCCATCAGACTCAGGAGCCCAGCTGGCTTCACGGGTCTGGGCTGGGCTaGCTAATGTTCAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: GHKDSPRPHQTQEPSWLHGSGLG*LMFNKE
Trigger: CTCTTTATTGAACATTAGCCAGCCCAGCCCAGACCC...GTGAAGCCAGCTGGGCTCCTGAGTCTGATGGGGACGTGGAGAGTCCTTATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGGGCAGCCCTGGGGTCTaGGCTGGGCTGGCTAATGTT +
Preference number: 4 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQEGSPGV*AGLANV
Trigger: AACATTAGCCAGCCCAGCCCAGACCCCAGGGCTGCC...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATATCCGGGACTTGGGGTaGAAGGAGGACATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FHCLAHGEHVGDPTGTLHIRDLG*KEDIEK
Trigger: CTTTTCTATGTCCTCCTTCCACCCCAAGTCCCGGAT...ATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGAGCCTGCTCTGGCCTTaGCCAGCCCAGAAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQESLLWP*PAQKGA
Trigger: AGCCCCTTTCTGGGCTGGCCAAGGCCAGAGCAGGCT...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CAA 72 bp AAGAGGGTTTGCCTTCCCTGCTTGTGGAAGTTTCCATaGTCTTGCCCATGGGGAGCACGTTGGGGACCCAAC +
Preference number: 4 (lower is better)
Translates to: KRVCLPCLWKFP*SCPWGARWGPN
Trigger: GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCTCACCGTGGTGCTaGGGAGGGGCGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPGSPWC*GGAQST
Trigger: TGTGGACTGCGCCCCTCCTCAGCACCACGGTGAGCC...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGACCCTTCAGGCTCTTGTaGGTCCCCAGATCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRPFRLL*VPRSAE
Trigger: CTCTGCTGATCTGGGGACTCACAAGAGCCTGAAGGG...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCTGGAGGAACAGCAGTaGTGGGCGGGTAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: FLMLGSPLPMENLCVLRQLEEQQ*WAGNGV
Trigger: AACTCCATTACCCGCCCATCACTGCTGTTCCTCCAG...CTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACGGGCCAGGATCAGAGTaGGGCAAGGGAGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHGPGSE*GKGGTQ
Trigger: CTGAGTGCCTCCCTTGCCTCACTCTGATCCTGGCCC...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTGCACTCACAAACCTTaGGCTAAACACAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: WIEGQREAGLLWWSEMPTCTHKP*AKHRVL
Trigger: CAGCACCCTGTGTTTAGCTCAAGGTTTGTGAGTGCA...GGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGTGGGACCCTCCATGCTaGTGTTCCAATTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKWDPPC*CSNWGL
Trigger: GAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCA...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACTGGGACCCTCCATTCTTCTATTTCCTCATaGTTGGCAGTCCCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FHCLAHGEHVGDPTGTLHSSISS*LAVPFP
Trigger: TGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGA...ATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTACATGGGAAGGAGAGATaGCCATTTTCCAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLHGKER*PFSRRW
Trigger: CCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATG...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGTGCTCCGAGCAGTTCTaGTGCAGACGGCTCTTGACG +
Preference number: 4 (lower is better)
Translates to: HREDCCMDRGTKRGWAPLCSEQF*CRRLLT
Trigger: CGTCAAGAGCCGTCTGCACCAGAACTGCTCGGAGCA...CAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTCTGAGTCCATTACAGACCTaGATGACCACAAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: GSPLPMENLCVLRQPWGLSPLQT*MTTKYQ
Trigger: CTGGTACTTTGTGGTCATCCAGGTCTGTAATGGACT...CAGACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGCCAGCCTGTGGTCTaGACGAGTCCATTACAGACC +
Preference number: 4 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHGQPVV*TSPLQT
Trigger: GGTCTGTAATGGACTCGTCCAGACCACAGGCTGGCC...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGATGGTGGCCCTGCCATTaGTGTAGTCAGAGACGAGCC +
Preference number: 4 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRWWPCH*CSQRRA
Trigger: GGCTCGTCTCTGACTACACCAATGGCAGGGCCACCA...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGAGGCAGCCCTGGGGTCTaGGCTGGGCTGGCTAATGTT +
Preference number: 4 (lower is better)
Translates to: FPGVGLVKPSVLESEQARGSPGV*AGLANV
Trigger: AACATTAGCCAGCCCAGCCCAGACCCCAGGGCTGCC...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGCAGTCCCCTTCCCATaGAGAATCTCTGTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: AFPACGSFHCLAHGEHVGAVPFP*RISVSL
Trigger: TAAGGACACAGAGATTCTCCATGGGAAGGGGACTGC...CCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCCAGTCTTGTCACCATTaGCACCTGTGCTCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: LLVPVGNFRLRWRCQELAQSCHH*HLCSGR
Trigger: ACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTG...GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TCTGAGCATATCCTTTCCTTATCAAAATGGAGACACAACTCAGCCCTAGTCCCAGTGGGCCGGCACTGCTaGGGGACCCAGTACACCCTC +
Preference number: 4 (lower is better)
Translates to: SEHILSLSKWRHNSALVPVGRHC*GTQYTL
Trigger: GAGGGTGTACTGGGTCCCCCAGCAGTGCCGGCCCAC...TGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
3UTR CAA 72 bp CACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTaGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HHWHLCSGRKSF*CPLSTPFLELA
Trigger: TGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCGGACCGCATTTTGCCTaGCCGGTACCTAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGGPHFA*PVPKAE
Trigger: CTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCC...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCAGGACCGCATTTTGCCTaGCCGGTACCTAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLAGPHFA*PVPKAE
Trigger: CTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCC...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATGGCTCACCGTGGTGCTaGGGAGGGGCGCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: PSMLLFQLGPHISLYKSHGSPWC*GGAQST
Trigger: TGTGGACTGCGCCCCTCCTCAGCACCACGGTGAGCC...ATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR TCA 90 bp CACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGCCACGATGCCGCCTATaGTGCCACCAACATCGAAGA +
Preference number: 4 (lower is better)
Translates to: HREDCCMDRGTKRGWAPLPRCRL*CHQHRR
Trigger: TCTTCGATGTTGGTGGCATCATAGGCGGCATCGTGG...CAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCGGACGTCGGCAGAGATaGGCATGTAGAAGACATTGT +
Preference number: 4 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFGRRQR*ACRRHC
Trigger: ACAATGTCTTCTACATGCTCATCTCTGCCGACGTCC...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCAGGCGTTGGCCTTGTaGAGCCTTCTGTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FLMLGSPLPMENLCVLRQQALAL*SLLSWN
Trigger: ATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTG...CTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGACAGCAGCTGCCTGAATaGACCATTCATGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRQQLPE*TIHALT
Trigger: CGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTG...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCAGCAAGTGGTGGCCCTaGCATTGGTGTAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSCLNEPFMPSRLASLVTSKWWP*HWCSQR
Trigger: TCTCTGACTACACCAATGGCAGGGCCACCACTTGCT...GGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGTGGGACCCTCCATGCTaGTGTTCCAATTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLWDPPC*CSNWGL
Trigger: GAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCA...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCCACCATTGGCACCTGTaGTCAGGGCGTAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGHHWHL*SGRKSF
Trigger: GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTG...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGACACCATTGGCACCTGTaGTCAGGGCGTAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRHHWHL*SGRKSF
Trigger: GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTG...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp ATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTACACATCTGCAGCAGCTaGCTGAATGAACCATTCATG +
Preference number: 4 (lower is better)
Translates to: MPSRLASLVTIGTCAQGVHICSS*LNEPFM
Trigger: CATGAATGGTTCATTCAGGCAGCTGCTGCAGATGTG...TACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCAAGCAGGCTCTTCGCATaGCCCCTTGGAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLASRLFA*PLGAFG
Trigger: GCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCT...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGGCATCACTATGGAGCTaGCAATCCCGTCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKASLWS*QSRPGQ
Trigger: TTGGCCAGGACGGGATTGCCAGCTCCATAGTGATGC...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACCCGTGGACAGGGCTTTaGCGTTGCCCTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHPWTGL*RCPSGS
Trigger: AGAGCCTGAAGGGCAACGCCAAAGCCCTGTCCACGG...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTCCACTGAGGACATTATaGGGCCAGGATCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: VCLPCLWKFPLSCPWGARPLRTL*GQDQSE
Trigger: CTCACTCTGATCCTGGCCCCATAATGTCCTCAGTGG...ACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 72 bp CTCCAAGGCCCCACCAGAGCAGCTAGATACAGAGTGTaGATTGGTGCACTCACAAACCCTGAGCTAGACACA +
Preference number: 4 (lower is better)
Translates to: LQGPTRAARYRV*IGALTNPELDT
Trigger: TGTGTCTAGCTCAGGGTTTGTGAGTGCACCAATCAACACTCTGTATCTAGCTGCTCTGGTGGGGCCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCTCTGCAGCAGCTGCCTaGATGAACCATTCATGCCCT +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGSAAAA*MNHSCP
Trigger: AGGGCATGAATGGTTCATTCAGGCAGCTGCTGCAGA...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCCTTCCCGAACCAGTTaGCAACACAGGTCACCACAG +
Preference number: 4 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLPSRTS*QHRSPQ
Trigger: CTGTGGTGACCTGTGTTGGCAACTGGTTCGGGAAGG...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCAAACTGGGACCCTCCATaGTGCTGTTCCAATTGGGGC +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLANWDPP*CCSNWG
Trigger: GCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTT...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGGCCCCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAACCAGGTGACCACATCTaGAGCAGCTGCCTGAATGAA +
Preference number: 4 (lower is better)
Translates to: RPLNLLFPHAWQSPSHGEPGDHI*SSCLNE
Trigger: TTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGG...TTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AACTCAGCCCTAGTCCCATCCCTTTTGCTTGCAGCTTCCAGAGCTCAGGCCCCTAAGTACCAGAGCTCGTaGATGTTCCAGAAATATCCC +
Preference number: 4 (lower is better)
Translates to: NSALVPSLLLAASRAQAPKYQSS*MFQKYP
Trigger: GGGATATTTCTGGAACATCCACGAGCTCTGGTACTT...AGGGGCCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGGACTAGGGCTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTAGCAGGCTCTTCGCATaGCCCCTTGGAGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: PESSISSCLAVPFPWRISSRLFA*PLGAFG
Trigger: GCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCT...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTGGGTCTGGGCTGGGCTaGCTAATGTTCAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: VCLPCLWKFPLSCPWGARGSGLG*LMFNKE
Trigger: CTCTTTATTGAACATTAGCCAGCCCAGCCCAGACCC...ACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp ATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCCCACTGAGGACATTATaGGGCCAGGATCAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ISSCLAVPFPWRISVSLGPLRTL*GQDQSE
Trigger: CTCACTCTGATCCTGGCCCCATAATGTCCTCAGTGG...GCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGAAAGGGAGCAGCAGATaGCACCAGGTGACCACATCT +
Preference number: 4 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIEKGSSR*HQVTTS
Trigger: AGATGTGGTCACCTGGTGCCATCTGCTGCTCCCTTT...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTATCCGGGACTTGGGGTaGAAGGAGGACATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VCLPCLWKFPLSCPWGARIRDLG*KEDIEK
Trigger: CTTTTCTATGTCCTCCTTCCACCCCAAGTCCCGGAT...ACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGACCACGATGCCGCCTATaGTGCCACCAACATCGAAGA +
Preference number: 4 (lower is better)
Translates to: FPGVGLVKPSVLESEQARPRCRL*CHQHRR
Trigger: TCTTCGATGTTGGTGGCATCATAGGCGGCATCGTGG...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTAGGACGTCGGCAGAGATaGGCATGTAGAAGACATTGT +
Preference number: 4 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLGRRQR*ACRRHC
Trigger: ACAATGTCTTCTACATGCTCATCTCTGCCGACGTCC...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCCAGAGCTCAGGCCCCTaGATCTTCTATTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGQSSGP*IFYFLM
Trigger: CATGAGGAAATAGAAGATTCAGGGGCCTGAGCTCTG...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATCCGAGCAGTTCTGGTaGAGACGGCTCTTGACGATA +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLASEQFW*RRLLTI
Trigger: TATCGTCAAGAGCCGTCTGCACCAGAACTGCTCGGA...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCTTGATGGGTTTGATCTaGTCCGAGCAGTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGLMGLI*SEQFWC
Trigger: GCACCAGAACTGCTCGGAGCAGATCAAACCCATCAA...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATAACGACAGGCCCCACTaGCCGTTCACCCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: PSMLLFQLGPHISLYKSHNDRPH*PFTQMP
Trigger: CGGCATCTGGGTGAACGGGCAGTGGGGCCTGTCGTT...ATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR GCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCAGCAAGTGGTGGCCCTaGCATTGGTGTAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGSKWWP*HWCSQR
Trigger: TCTCTGACTACACCAATGGCAGGGCCACCACTTGCT...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTACCCAGCTTGGGGAAATaGACAGAGAAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLPSLGK*TEKTVA
Trigger: TGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGG...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CTGTCTTGGAATCTGAACAAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAACCTGCCTCGCCCGAGTaGTGGCCCTGGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: LSWNLNKQESEHILSLSKPASPE*WPWRNS
Trigger: GCTGTTCCTCCAGGGCCAGCACTCGGGCGAGGCAGG...TTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCGTTGTCCTTGTCAAATaGGGCCCAGCTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGVVLVK*GPAAPH
Trigger: ATGTGGTGCAGCTGGGCCCCATTTGACAAGGACAAC...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGCAGTCCACATCTTCTaGGTGTTCGATGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRAVHIF*VFDEEE
Trigger: CTCTTCCTCATCGAACACCCAGAAGATGTGGACTGC...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGGCAGTCCACATCTTCTaGGTGTTCGATGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKAVHIF*VFDEEE
Trigger: CTCTTCCTCATCGAACACCCAGAAGATGTGGACTGC...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGTCCTGGTTCTCAGCTaGCTCACCGTGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPVLVLS*LTVVLR
Trigger: CCTCAGCACCACGGTGAGCCAGCTGAGAACCAGGAC...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGACCATTTTCCAGGCGTTaGCCTTGTGAAGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRPFSRR*PCEAFC
Trigger: ACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGG...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCCCATTTTCCAGGCGTTaGCCTTGTGAAGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGPFSRR*PCEAFC
Trigger: ACAGAAGGCTTCACAAGGCCAACGCCTGGAAAATGG...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGGCTGGGCTCCTTTGGTaGAGTGAGATGCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLAGLLW*SEMPTY
Trigger: ATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGC...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTTTGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTAACTTTAGGCTCAGATaGAGATGCCAAGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: VCLPCLWKFPLSCPWGARNFRLR*RCQELA
Trigger: GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTT...ACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGACATTACAGACCTGGATaGCCACAAAGTACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRHYRPG*PQSTRA
Trigger: AGCTCTGGTACTTTGTGGTCATCCAGGTCTGTAATG...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCCATTACAGACCTGGATaGCCACAAAGTACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: CLNEPFMPSRLASLVTIGHYRPG*PQSTRA
Trigger: AGCTCTGGTACTTTGTGGTCATCCAGGTCTGTAATG...GCCAATGGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TCTGAGCATATCCTTTCCTTATCAAAATGGAGACACAACTCAGCCCTAGTCCCACCAGGCCCCCACAGATaGTCAGCATCACTATGGAGC +
Preference number: 4 (lower is better)
Translates to: SEHILSLSKWRHNSALVPPGPHR*SASLWS
Trigger: GCTCCATAGTGATGCTGATCATCTGTGGGGGCCTGG...TGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCACCAGGCCCCCACAGATaGTCAGCATCACTATGGAGC +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPPGPHR*SASLWS
Trigger: GCTCCATAGTGATGCTGATCATCTGTGGGGGCCTGG...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATGGGACTTGGGCCAGGATCAGAGTaGGGCAAGGGAGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: CCCSNWGLIFLYTKVMGLGPGSE*GKGGTQ
Trigger: CTGAGTGCCTCCCTTGCCTCACTCTGATCCTGGCCC...AAGTCCCATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR GCA 90 bp TCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATTTCATTCTGTCAGAGACGAGCCCTaGCACGATGCCGCCTATGAT +
Preference number: 4 (lower is better)
Translates to: STPFLELAYSRHSLAFHSVRDEP*HDAAYD
Trigger: ATCATAGGCGGCATCGTGGCAGGGCTCGTCTCTGAC...AGAATGAAATGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp GGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAGTGAGGGTTTGCCTTCCCTaGTTGTGGAAGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GNFRLRWRCQELARKQRVRVCLP*LWKFPL
Trigger: CAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCT...CACTCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGACCAGGTGACCACATCTaGAGCAGCTGCCTGAATGAA +
Preference number: 4 (lower is better)
Translates to: FPGVGLVKPSVLESEQARPGDHI*SSCLNE
Trigger: TTCATTCAGGCAGCTGCTGCAGATGTGGTCACCTGG...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGAGGCTCAGATGGAGATaGCAAGAGCTAGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIERLRWR*QELARK
Trigger: TTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCT...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCTTTCTTTATACCCGCTaGCTCTGCTCAGGGACACCT +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGFLYTR*LCSGTP
Trigger: AGGTGTCCCTGAGCAGAGGCAGCGGGTATAAAGAAA...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCACAGAGGGCCAGCCTGTaGTCTGGACGAGTCCATTAC +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPQRASL*SGRVHY
Trigger: GTAATGGACTCGTCCAGACCACAGGCTGGCCCTCTG...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AGGCCCCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATGCCTTCCCTGCTTGTaGAAGTTTCCATTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: RPLNLLFPHAWQSPSHGECLPCL*KFPLSC
Trigger: GCAAGACAATGGAAACTTCCACAAGCAGGGAAGGCA...TTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACCAGAGCTCAGGCCCCTaGATCTTCTATTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHQSSGP*IFYFLM
Trigger: CATGAGGAAATAGAAGATTCAGGGGCCTGAGCTCTG...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp AGCAGCTGCCTGAATGAACCATTCATGCCCTCACGTCTTGCCAGTCTTGTCACCGAACAAGCAAGAGTCTaGGCATATCCTTTCCTTATC +
Preference number: 4 (lower is better)
Translates to: SSCLNEPFMPSRLASLVTEQARV*AYPFLI
Trigger: GATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTC...GGTGACAAGACTGGCAAGACGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTCCCAGCTTGGGGAAATaGACAGAGAAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PESSISSCLAVPFPWRISPSLGK*TEKTVA
Trigger: TGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGG...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAAACAGAATCTATTGGTaGCAGTGGGCAACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRNRIYW*QWATLG
Trigger: GCCTAAAGTTGCCCACTGGCACCAATAGATTCTGTT...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGAAAGTACCAGAGCTCGTaGATGTTCCAGAAATATCCC +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRKYQSS*MFQKYP
Trigger: GGGATATTTCTGGAACATCCACGAGCTCTGGTACTT...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGTCCATTACAGACCTaGATGACCACAAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRSPLQT*MTTKYQ
Trigger: CTGGTACTTTGTGGTCATCCAGGTCTGTAATGGACT...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TCCTTCTTGTGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTTGCCCACAGATGTGTaGGAATTCCAGATGCCCATG +
Preference number: 4 (lower is better)
Translates to: SFLCPLSTPFLELAYSRHLPTDV*EFQMPM
Trigger: CATGGGCATCTGGAATTCCCACACATCTGTGGGCAA...GTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACACAAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACGGAAAATACTATCACTaGTGGGTTAGGACCATACTA +
Preference number: 4 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNGKYYH*WVRTIL
Trigger: TAGTATGGTCCTAACCCACCAGTGATAGTATTTTCC...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGCTGGGCTCCTTTGGTaGAGTGAGATGCCCACCTAT +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPAGLLW*SEMPTY
Trigger: ATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGC...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp AGGCCCCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAAATCTATTGGTGCCAGTaGGCAACTTTAGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RPLNLLFPHAWQSPSHGEIYWCQ*ATLGSD
Trigger: ATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGAT...TTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
3UTR CAA 72 bp TCTGGGCTGGGCTGGCTAATGTTCAATAAAGAGGGTTaGCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SGLGWLMFNKEG*PSLLVEVSIVL
Trigger: CAAGACAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAACATTAGCCAGCCCAGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAAAAGTCATGGGACTTaGGGAAAATACTATCACTGG +
Preference number: 4 (lower is better)
Translates to: LLVPVGNFRLRWRCQELAKSHGT*GKYYHW
Trigger: CCAGTGATAGTATTTTCCTCAAGTCCCATGACTTTT...GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR TCA 90 bp CCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATCAGCAGCTGCCTGAATaGACCATTCATGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: PSMLLFQLGPHISLYKSHQQLPE*TIHALT
Trigger: CGTGAGGGCATGAATGGTTCATTCAGGCAGCTGCTG...ATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR GCA 90 bp ACCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCACCCATCCCTTTTGCTTaGAGCTTCCAGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TLHAAVPIGASYFFIQKSPIPFA*SFQSSG
Trigger: GCCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGG...TGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CCA 90 bp ACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCAAATACTATCACTGGTaGGTTAGGACCATACTAGAG +
Preference number: 4 (lower is better)
Translates to: TIGTCAQGVSPSCVHCLLKYYHW*VRTILE
Trigger: CTCTAGTATGGTCCTAACCCACCAGTGATAGTATTT...GAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CCA 90 bp GTTGCCAATGCTGGCTCGGGCAGCCTGCTTTTATTCTCTTATCTGGCCCCACCCATAGTAGGCACTCCTTaGCATTTCATTCTCAAAATA +
Preference number: 4 (lower is better)
Translates to: VANAGSGSLLLFSYLAPPIVGTP*HFILKI
Trigger: TATTTTGAGAATGAAATGCCAAGGAGTGCCTACTAT...GGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCCGAGCCAGCATTGGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR TCA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCGAACAAGCAAGAGTCTaGGCATATCCTTTCCTTATC +
Preference number: 4 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGEQARV*AYPFLI
Trigger: GATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTC...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR TCA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTTTCTGTCTTGGAATCTaGACAAGCAAGAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PESSISSCLAVPFPWRISFCLGI*TSKSLS
Trigger: GCTCAGACTCTTGCTTGTTCAGATTCCAAGACAGAA...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp TGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATGGGACTTACAGGGCTTTGGCGTTaGCCTTCAGGCTCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: CCCSNWGLIFLYTKVMGLTGLWR*PSGSCE
Trigger: CTCACAAGAGCCTGAAGGGCAACGCCAAAGCCCTGT...AAGTCCCATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR GCA 90 bp GGCAGATTACAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: GRLQRLKLNMGRRDAHFPKFPLS*PWGARW
Trigger: CCAACGTGCTCCCCATGGGCAAGACAATGGAAACTT...TGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTGTAATCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGCTTTCCTTATCAAAATaGAGACACAACTCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKLSLSK*RHNSAL
Trigger: TAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAG...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp GTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCAGAAAACAGCGATCAAACAGAATCTATTaGTGCCAGTGGGCAACTTTA +
Preference number: 4 (lower is better)
Translates to: VGNFRLRWRCQELARKQRSNRIY*CQWATL
Trigger: TAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGA...TCGCTGTTTTCTGGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTTTTATTCTCTTATCTaGCCCCACCCACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLFYSLI*PHPHPA
Trigger: AGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAA...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR GCA 90 bp ACCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCAAAGTTTCCATTGTCTTaGCCATGGGGAGCACGTTGG +
Preference number: 4 (lower is better)
Translates to: TLHAAVPIGASYFFIQKSKFPLS*PWGARW
Trigger: CCAACGTGCTCCCCATGGGCAAGACAATGGAAACTT...TGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR GCA 90 bp TCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATTTCATTCTAGGGTTTGCCTTCCCTaGTTGTGGAAGTTTCCATTG +
Preference number: 4 (lower is better)
Translates to: STPFLELAYSRHSLAFHSRVCLP*LWKFPL
Trigger: CAATGGAAACTTCCACAAGCAGGGAAGGCAAACCCT...AGAATGAAATGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp TGTCCACTGTCTACTCCATTCCTAGAGCTGGCATATAGTAGGCACTCCTTGGCATCAAACAGAATCTATTaGTGCCAGTGGGCAACTTTA +
Preference number: 4 (lower is better)
Translates to: CPLSTPFLELAYSRHSLASNRIY*CQWATL
Trigger: TAAAGTTGCCCACTGGCACCAATAGATTCTGTTTGA...TGCCAAGGAGTGCCTACTATATGCCAGCTCTAGGAATGGAGTAGACAGTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR GCA 90 bp CTGTCTTGGAATCTGAACAAGCAAGAGTCTGAGCATATCCTTTCCTTATCAAAACATGGGAAGGAGAGATaGCCATTTTCCAGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: LSWNLNKQESEHILSLSKHGKER*PFSRRW
Trigger: CCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATG...TTTTGATAAGGAAAGGATATGCTCAGACTCTTGCTTGTTCAGATTCCAAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CCA 90 bp CCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATAACTTTAGGCTCAGATaGAGATGCCAAGAGCTAGCC +
Preference number: 4 (lower is better)
Translates to: PSMLLFQLGPHISLYKSHNFRLR*RCQELA
Trigger: GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTT...ATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CCA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGATAGTAGGCACTCCTTaGCATTTCATTCTCAAAATA +
Preference number: 4 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQEIVGTP*HFILKI
Trigger: TATTTTGAGAATGAAATGCCAAGGAGTGCCTACTAT...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp GGCACCGCGGGCTGCAGGTCCCGAGCCCTGCCCCGCGGGAAGGCAGCTAAGGCCAGGGAGCCCAGGATGTaGCCCACAGATGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: GTAGCRSRALPRGKAAKAREPRM*PTDVWE
Trigger: TTCCCACACATCTGTGGGCAACATCCTGGGCTCCCT...GGCCTTAGCTGCCTTCCCGCGGGGCAGGGCTCGGGACCTGCAGCCCGCGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CAA 90 bp TGCGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCAGAAGAGGGCCCAGCTaGGGGAAATGCACAGAGAAG +
Preference number: 5 (lower is better)
Translates to: CARTPQPLGGRWDWAPWSRRGPS*GKCTEK
Trigger: CTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT...GCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CAA 90 bp AGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCCCTCGAAGTTTCCATTGTCTaGCCCATGGGGAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: RRRERARAVRTASTLSPLEVSIV*PMGSTL
Trigger: CAACGTGCTCCCCATGGGCAAGACAATGGAAACTTC...GAGGGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS TCA 90 bp GAGAGAACTCGACCACGCCTGGGATCCGGAGCGCCCCAAAGAAGCTaGTGGCAGCAGGCTCTTCGCATGGCCCCTTGGAGCATTTGGCCA +
Preference number: 5 (lower is better)
Translates to: ERTRPRLGSGAPQRS*WQQALRMAPWSIWP
Trigger: TGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCGCTCCGGATCCCAGGCGTGGTCGAGTTCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS TCA 90 bp CCGGAAGAACCAGACTCCCGGAGCCAGGGAGGACCGCATTTTGCCTaGCCGGTACCTAAGGCTGAGTCGACGGAGGAGGCTACAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PEEPDSRSQGGPHFA*PVPKAESTEEATEL
Trigger: CAGCTCTGTAGCCTCCTCCGTCGACTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCTGGCTCCGGGAGTCTGGTTCTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS CCA 90 bp GATCCGGAGCGCCCCAAAGAAGCTGATGGCAGCAGGCTCTTCGCATaGCCCCTTGGAGCATTTGGCCACAGTCTCAAGGCCGCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: DPERPKEADGSRLFA*PLGAFGHSLKAALP
Trigger: AGGGAGAGCGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCGCTCCGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS-3UTR CAA 90 bp GGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTCTGGCGATGAGGAAGGCGTaGTCCACGCCCCCTAGTAAC +
Preference number: 5 (lower is better)
Translates to: GSPLPMENLCVLRQPWGLAMRKA*STPPSN
Trigger: GTTACTAGGGGGCGTGGACAACGCCTTCCTCATCGC...CAGACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp GAGGAGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCGTTTGCCTTCCCTGCTaGTGGAAGTTTCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: EEAPRASEGCEDCQHAVTVCLPC*WKFPLS
Trigger: AGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC...GGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CAA 90 bp GCCTTCCCTGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGGCCCCTTGGAGCATTaGGCCACAGTCTCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: AFPACGSFHCLAHGEHVGGPLEH*ATVSRP
Trigger: CGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCC...CCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCAGGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp ATGCCCTCACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAACCGTGGACAGGGCTTaGGCGTTGCCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: MPSRLASLVTIGTCAQGVTVDRA*ALPFRL
Trigger: GAGCCTGAAGGGCAACGCCAAAGCCCTGTCCACGGT...TACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGTGAGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGCGCTCGCACTCCTCAGCCCTTGGGTGGTCGATGGGACTGGGCGCCCTGGAGCTTCAATAAAGAGGGTTaGCCTTCCCTGCTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: CARTPQPLGGRWDWAPWSFNKEG*PSLLVE
Trigger: TTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAA...GCTCCAGGGCGCCCAGTCCCATCGACCACCCAAGGGCTGAGGAGTGCGAGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CAA 90 bp AGGCGCCGAGAGCGAGCGAGGGCTGTGAGGACTGCCAGCACGCTGTCACCCCTCGTCAAACAGAATCTATaGGTGCCAGTGGGCAACTTT +
Preference number: 5 (lower is better)
Translates to: RRRERARAVRTASTLSPLVKQNL*VPVGNF
Trigger: AAAGTTGCCCACTGGCACCAATAGATTCTGTTTGAC...GAGGGGTGACAGCGTGCTGGCAGTCCTCACAGCCCTCGCTCGCTCTCGGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS-3UTR CAA 90 bp GGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGCCCTGGGGTCTGCACGTCTTGCCAGTCTaGTCACCATTGGCACCTGTG +
Preference number: 5 (lower is better)
Translates to: GSPLPMENLCVLRQPWGLHVLPV*SPLAPV
Trigger: CACAGGTGCCAATGGTGACAAGACTGGCAAGACGTG...CAGACCCCAGGGCTGCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 90 bp TTGGTAGAGGGGCAGCTTCAGCTCCCCGGACTCACCCGCTGCCTCTaGTCAGGGACACCTTCCAGGCCAAGATCTCTTTGTATACTAACC +
Preference number: 5 (lower is better)
Translates to: LVEGQLQLPGLTRCL*SGTPSRPRSLCILT
Trigger: GGTTAGTATACAAAGAGATCTTGGCCTGGAAGGTGTCCCTGAGCAGAGGCAGCGGGTGAGTCCGGGGAGCTGAAGCTGCCCCTCTACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 90 bp CTTCCTGCTCTCACTTTCTCTCCCCTGGGTGGTGTCTTCCTTAAGTaGAAGTGTGTCCCCAGATGCGTGCTGGTTACCATGTCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LPALTFSPLGGVFLK*KCVPRCVLVTMSRG
Trigger: CCCCCGGGACATGGTAACCAGCACGCATCTGGGGACACACTTCCACTTAAGGAAGACACCACCCAGGGGAGAGAAAGTGAGAGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCGCGATGAGGAAGGCGTaGTCCACGCCCCCTAGTAAC +
Preference number: 5 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFAMRKA*STPPSN
Trigger: GTTACTAGGGGGCGTGGACAACGCCTTCCTCATCGC...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 90 bp TCAGCACCAAGGCCACAAAACAAAGAGTCACGGTGTCCACAAAGCTaGCCTAGTGCTCCACACTGTCACGAGAGAGGCCCCGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: SAPRPQNKESRCPQS*PSAPHCHERGPDRA
Trigger: AGCTCTGTCGGGGCCTCTCTCGTGACAGTGTGGAGCACTAGGGCAGCTTTGTGGACACCGTGACTCTTTGTTTTGTGGCCTTGGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525837.5
CDS CCA 90 bp GCACGTTGGGGACCCAACTGGGACCCTCCATGCTGCTGTTCCAATTaGGGCCTCATATTTCTTTATACCCGCTGCCTCTGCTCAGGGACA +
Preference number: 5 (lower is better)
Translates to: ARWGPNWDPPCCCSN*GLIFLYTRCLCSGT
Trigger: TGTCCCTGAGCAGAGGCAGCGGGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354617.5
ENST00000403796.7
CDS-3UTR CAA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACAGGGAGGACCGCATTTaGCCTGACCGGTACCTAAGG +
Preference number: 5 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNREDRI*PDRYLR
Trigger: CCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCT...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTATCTTCGCATGGCCCCTaGGAGCATTTGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLSSHGP*EHLATV
Trigger: GACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGA...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTAAGCGCGTATGGGCCATaGACCAGGCCCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLSAYGP*TRPPQM
Trigger: CATCTGTGGGGGCCTGGTCAATGGCCCATACGCGCT...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGAGCGCGTATGGGCCATaGACCAGGCCCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKSAYGP*TRPPQM
Trigger: CATCTGTGGGGGCCTGGTCAATGGCCCATACGCGCT...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS TCA 90 bp TTGTTCTGCATACCCCAGGCAGAGGGGCCAGATGACCTTGGTTTCTaGACTTCAGGAGGCACTTGCAGCTCAGTCGCAGCTCAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LFCIPQAEGPDDLGF*TSGGTCSSVAAQRE
Trigger: TTCCCTCTGAGCTGCGACTGAGCTGCAAGTGCCTCCTGAAGTTCAGAAACCAAGGTCATCTGGCCCCTCTGCCTGGGGTATGCAGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp AAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCCAGGGTCCTCAGGGTaGTCCTGGTTCTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KWRVEEGPAWGNAQRRLLPGSSG*SWFSAG
Trigger: GCCAGCTGAGAACCAGGACAACCCTGAGGACCCTGG...CAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp ATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCAGGGAGGACCGCATTTaGCCTGACCGGTACCTAAGG +
Preference number: 5 (lower is better)
Translates to: ISSCLAVPFPWRISVSLGREDRI*PDRYLR
Trigger: CCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCT...GCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp ACGTCTTGCCAGTCTTGTCACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTGGTGCAGACGGCTCTaGACGATACTGATAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TSCQSCHHWHLCSGRKSFWCRRL*TILIGF
Trigger: GAAGCCTATCAGTATCGTCAAGAGCCGTCTGCACCA...GAAGGACTTACGCCCTGAGCACAGGTGCCAATGGTGACAAGACTGGCAAGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTACCCTTCCCGAACCAGTaGCCAACACAGGTCACCACA +
Preference number: 5 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLPFPNQ*PTQVTT
Trigger: TGTGGTGACCTGTGTTGGCAACTGGTTCGGGAAGGG...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp AACAGGCCTAAATGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGGGAGCCCAGGATGTaGCCCACAGATGTGTGGGAA +
Preference number: 5 (lower is better)
Translates to: NRPKWRVEEGPAWGNAQRREPRM*PTDVWE
Trigger: TTCCCACACATCTGTGGGCAACATCCTGGGCTCCCT...TCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCATTTAGGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGACCAGGGTCCTCAGGGTaGTCCTGGTTCTCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: FPGVGLVKPSVLESEQARPGSSG*SWFSAG
Trigger: GCCAGCTGAGAACCAGGACAACCCTGAGGACCCTGG...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGGCCCCTTGGAGCATTaGGCCACAGTCTCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: PESSISSCLAVPFPWRISGPLEH*ATVSRP
Trigger: CGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCC...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTACCGTGGACAGGGCTTaGGCGTTGCCCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PESSISSCLAVPFPWRISTVDRA*ALPFRL
Trigger: GAGCCTGAAGGGCAACGCCAAAGCCCTGTCCACGGT...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 90 bp AGAGAAAAGCAAACAAACCCCAGGCCCAGTTTCAGTGTTAGGCTGTaGCCGAGCTCTGAGCCTCTGTCTCTCACCTTCAATGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: REKQTNPRPSFSVRL*PSSEPLSLTFNERL
Trigger: CAGCCTCTCATTGAAGGTGAGAGACAGAGGCTCAGAGCTCGGGCACAGCCTAACACTGAAACTGGGCCTGGGGTTTGTTTGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 90 bp CAGGACTGTCCAGGGGTTTTTGGATTCCAAGCACAGTGCTCTGTCTaGTCTGATAAATCACTGCACACCTCACACACAGGCCTCCCATGG +
Preference number: 5 (lower is better)
Translates to: QDCPGVFGFQAQCSV*SDKSLHTSHTGLPW
Trigger: CCATGGGAGGCCTGTGTGTGAGGTGTGCAGTGATTTATCAGAGCAGACAGAGCACTGTGCTTGGAATCCAAAAACCCCTGGACAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp ATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTGTCCTTAGGCTCCCATCCCTTTTGCTaGCAGCTTCCAGAGCTCAGG +
Preference number: 5 (lower is better)
Translates to: ISSCLAVPFPWRISVSLGSHPFC*QLPELR
Trigger: CCTGAGCTCTGGAAGCTGCAAGCAAAAGGGATGGGA...GCCTAAGGACACAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATCACGTCTTGCCAGTCTaGTCACCATTGGCACCTGTG +
Preference number: 5 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHHVLPV*SPLAPV
Trigger: CACAGGTGCCAATGGTGACAAGACTGGCAAGACGTG...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS TCA 90 bp GAGAATCTGGGTCTGATGGAGTGCTATGCCCAAGGTCTCATGGAGTaGGTGGAGAAAGCAGGACTGTCCAGGGGTTTTTGGATTCCAAGC +
Preference number: 5 (lower is better)
Translates to: ENLGLMECYAQGLME*VEKAGLSRGFWIPS
Trigger: GCTTGGAATCCAAAAACCCCTGGACAGTCCTGCTTTCTCCACTCACTCCATGAGACCTTGGGCATAGCACTCCATCAGACCCAGATTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp GCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGTGGTGCAGACGGCTCTaGACGATACTGATAGGCTTC +
Preference number: 5 (lower is better)
Translates to: AQLGEMHREDCCMDRGTKWCRRL*TILIGF
Trigger: GAAGCCTATCAGTATCGTCAAGAGCCGTCTGCACCA...CTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CCTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTCCCTTCCCGAACCAGTaGCCAACACAGGTCACCACA +
Preference number: 5 (lower is better)
Translates to: PESSISSCLAVPFPWRISPFPNQ*PTQVTT
Trigger: TGTGGTGACCTGTGTTGGCAACTGGTTCGGGAAGGG...AGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTCTTCGCATGGCCCCTaGGAGCATTTGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLSSHGP*EHLATV
Trigger: GACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGA...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGCTTGTGGAAGTTTCCATTGTCTTGCCCATGGGGAGCACGTTGGGGACCCAACCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: CLWKFPLSCPWGARWGPNQAKIS*YTNRQR
Trigger: CCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTG...GTTGGGTCCCCAACGTGCTCCCCATGGGCAAGACAATGGAAACTTCCACAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGAAGTTTCCATTGTCTaGCCCATGGGGAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHEVSIV*PMGSTL
Trigger: CAACGTGCTCCCCATGGGCAAGACAATGGAAACTTC...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp AGGCTGGGCTCCTTTGGTGGAGTGAGATGCCCACCTATAGATACAGGCAGATTATCATGCCCTCACGTCTaGCCAGTCTTGTCACCATTG +
Preference number: 5 (lower is better)
Translates to: RLGSFGGVRCPPIDTGRLSCPHV*PVLSPL
Trigger: CAATGGTGACAAGACTGGCAAGACGTGAGGGCATGA...TAATCTGCCTGTATCTATAGGTGGGCATCTCACTCCACCAAAGGAGCCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 90 bp TGGAGAAAGCAGGACTGTCCAGGGGTTTTTGGATTCCAAGCACAGTaGTCTGTCTGCTCTGATAAATCACTGCACACCTCACACACAGGC +
Preference number: 5 (lower is better)
Translates to: WRKQDCPGVFGFQAQ*SVCSDKSLHTSHTG
Trigger: GCCTGTGTGTGAGGTGTGCAGTGATTTATCAGAGCAGACAGAGCACTGTGCTTGGAATCCAAAAACCCCTGGACAGTCCTGCTTTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp ACCATTGGCACCTGTGCTCAGGGCGTAAGTCCTTCTTGTGTCCACTGTCTACTCGTTTGCCTTCCCTGCTaGTGGAAGTTTCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: TIGTCAQGVSPSCVHCLLVCLPC*WKFPLS
Trigger: AGACAATGGAAACTTCCACAAGCAGGGAAGGCAAAC...GAGTAGACAGTGGACACAAGAAGGACTTACGCCCTGAGCACAGGTGCCAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CAGAATCTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGGGGCGTAAGTCCTTCTaGTGTCCACTGTCTACTCCA +
Preference number: 5 (lower is better)
Translates to: QNLLVPVGNFRLRWRCQEGRKSF*CPLSTP
Trigger: TGGAGTAGACAGTGGACACAAGAAGGACTTACGCCC...CTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCGGGCGTAAGTCCTTCTaGTGTCCACTGTCTACTCCA +
Preference number: 5 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGGRKSF*CPLSTP
Trigger: TGGAGTAGACAGTGGACACAAGAAGGACTTACGCCC...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 90 bp CTCTGTGGCATCTCAGACCCCTTGGAAAACACTTCCCAAGCACCATaGTCTGCTGAGGTTGAAAGTCTTTACAACTGGCCCACAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LCGISDPLENTSQAP*SAEVESLYNWPTRR
Trigger: TCTTCTTGTGGGCCAGTTGTAAAGACTTTCAACCTCAGCAGAGCATGGTGCTTGGGAAGTGTTTTCCAAGGGGTCTGAGATGCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 90 bp AAGCTCACACGTCTAAAGCCAGACACAATTCCAGGACAGAGCAGTTaGTCACTAAATCCTCCTCGCTTTCTGCTGCTCTTCTTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KLTRLKPDTIPGQSS*SLNPPRFLLLFFPS
Trigger: GGAAGGGAAGAAGAGCAGCAGAAAGCGAGGAGGATTTAGTGAGCAACTGCTCTGTCCTGGAATTGTGTCTGGCTTTAGACGTGTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 90 bp ATAAAGATGTGGTGGTTCAGAGAATCTGGGTCTGATGGAGTGCTATaGCCAAGGTCTCATGGAGTGAGTGGAGAAAGCAGGACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: IKMWWFRESGSDGVL*PRSHGVSGESRTVQ
Trigger: CTGGACAGTCCTGCTTTCTCCACTCACTCCATGAGACCTTGGGCATAGCACTCCATCAGACCCAGATTCTCTGAACCACCACATCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 90 bp ACGAGTCCATTACAGACCTGGATGACCACAAAGTACCAGAGCTCGTaGATGTTCCAGAAATATCCCAGGCCAAAGAGCGAGGTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TSPLQTWMTTKYQSS*MFQKYPRPKSEVKR
Trigger: CCTTTTCACCTCGCTCTTTGGCCTGGGATATTTCTGGAACATCCACGAGCTCTGGTACTTTGTGGTCATCCAGGTCTGTAATGGACTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
ENST00000532000.5
CDS-3UTR CAA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHQAKIS*YTNRQR
Trigger: CCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTG...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTCATGCCCTCACGTCTaGCCAGTCTTGTCACCATTG +
Preference number: 5 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLSCPHV*PVLSPL
Trigger: CAATGGTGACAAGACTGGCAAGACGTGAGGGCATGA...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp AGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGGATAGAGGTGAAGCCTTCTGTCTaGGAATCTGAACAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: RRGPSLGKCTEKTVAWIEVKPSV*ESEQAR
Trigger: TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCAC...CTCTATCCATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CACAGAGAAGACTGTTGCATGGATAGAGGGACAAAGAGAGGCTGGGCTCCTTTGGTGAAGCCTTCTGTCTaGGAATCTGAACAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HREDCCMDRGTKRGWAPLVKPSV*ESEQAR
Trigger: TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCAC...CAAAGGAGCCCAGCCTCTCTTTGTCCCTCTATCCATGCAACAGTCTTCTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TGGAGAGTAGAAGAGGGCCCAGCTTGGGGAAATGCACAGAGAAGACTGTTGCATGTCAAACAGAATCTATaGGTGCCAGTGGGCAACTTT +
Preference number: 5 (lower is better)
Translates to: WRVEEGPAWGNAQRRLLHVKQNL*VPVGNF
Trigger: AAAGTTGCCCACTGGCACCAATAGATTCTGTTTGAC...ATGCAACAGTCTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCTACTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp TTTCCAGGCGTTGGCCTTGTGAAGCCTTCTGTCTTGGAATCTGAACAAGCAAGAGTATCATTGATGGGTTaGATCTGCTCCGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: FPGVGLVKPSVLESEQARVSLMG*ICSEQF
Trigger: GAACTGCTCGGAGCAGATCAAACCCATCAATGATAC...TCTTGCTTGTTCAGATTCCAAGACAGAAGGCTTCACAAGGCCAACGCCTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CTATTGGTGCCAGTGGGCAACTTTAGGCTCAGATGGAGATGCCAAGAGCTAGCCCAAAAGTCATGGGACTaGAGGAAAATACTATCACTG +
Preference number: 5 (lower is better)
Translates to: LLVPVGNFRLRWRCQELAQKSWD*RKILSL
Trigger: CAGTGATAGTATTTTCCTCAAGTCCCATGACTTTTG...GGCTAGCTCTTGGCATCTCCATCTGAGCCTAAAGTTGCCCACTGGCACCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CAA 90 bp CCCTCCATGCTGCTGTTCCAATTGGGGCCTCATATTTCTTTATACAAAAGTCATAGAAGAGGGCCCAGCTaGGGGAAATGCACAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PSMLLFQLGPHISLYKSHRRGPS*GKCTEK
Trigger: CTTCTCTGTGCATTTCCCCAAGCTGGGCCCTCTTCT...ATGACTTTTGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308074.4
CDS-3UTR CAA 90 bp TGGCCCTGGAGGAACAGCAGTGATGGGCGGGTAATGGAGTTATCAACAGGCCTATATAGTAGGCACTCCTaGGCATTTCATTCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: WPWRNSSDGRVMELSTGLYSRHS*AFHSQN
Trigger: ATTTTGAGAATGAAATGCCAAGGAGTGCCTACTATA...TAGGCCTGTTGATAACTCCATTACCCGCCCATCACTGCTGTTCCTCCAGGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS-3UTR CAA 90 bp CAGAGGTTAAAGCTTAACATGGGAAGGAGAGATGCCCATTTTCCAGGCGTTGGCGCTAGATACAGAGTGTaGATTGGTGCACTCACAAAC +
Preference number: 5 (lower is better)
Translates to: QRLKLNMGRRDAHFPGVGARYRV*IGALTN
Trigger: GTTTGTGAGTGCACCAATCAACACTCTGTATCTAGC...GCCAACGCCTGGAAAATGGGCATCTCTCCTTCCCATGTTAAGCTTTAACCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS CCA 90 bp AGTCATACTGCAGGACAGAGGATTTGCATGCAGCCCCCACTCAAATaGCACTCGAGTCACAGACTCGAAGTAAATACTCACAAAAGTCAT +
Preference number: 5 (lower is better)
Translates to: SHTAGQRICMQPPLK*HSSHRLEVNTHKSH
Trigger: ATGACTTTTGTGAGTATTTACTTCGAGTCTGTGACTCGAGTGCCATTTGAGTGGGGGCTGCATGCAAATCCTCTGTCCTGCAGTATGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525837.5
ENST00000526405.5
CDS-3UTR CAA 90 bp CTGAATCTTCTATTTCCTCATGCTTGGCAGTCCCCTTCCCATGGAGAATCTCTGTTCAATAAAGAGGGTTaGCCTTCCCTGCTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LNLLFPHAWQSPSHGESLFNKEG*PSLLVE
Trigger: TTCCACAAGCAGGGAAGGCAAACCCTCTTTATTGAA...CAGAGATTCTCCATGGGAAGGGGACTGCCAAGCATGAGGAAATAGAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS TCA 90 bp TCGAGTCACAGACTCGAAGTAAATACTCACAAAAGTCATGGGACTTaGGGAAAATACTATCACTGGTGGGTTAGGACCATACTAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SSHRLEVNTHKSHGT*GKYYHWWVRTILEP
Trigger: CGGCTCTAGTATGGTCCTAACCCACCAGTGATAGTATTTTCCTCAAGTCCCATGACTTTTGTGAGTATTTACTTCGAGTCTGTGACTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525837.5
CDS-3UTR CAA 90 bp TCTGAGCATATCCTTTCCTTATCAAAATGGAGACACAACTCAGCCCTAGTCCCAGCTAGACACAGGGTGTaGATTGGTGTGTTTATAAAC +
Preference number: 5 (lower is better)
Translates to: SEHILSLSKWRHNSALVPARHRV*IGVFIN
Trigger: GTTTATAAACACACCAATCAACACCCTGTGTCTAGC...TGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS TCA 90 bp TCGAGTCACAGACTCGAAGTAAATACTCACAAAAGTCATGGGACTTaGGGAAAATACTATCACTGGTGGGTTAGGACCATACTAGAGCTA +
Preference number: 5 (lower is better)
Translates to: SSHRLEVNTHKSHGT*GKYYHWWVRTILEL
Trigger: TAGCTCTAGTATGGTCCTAACCCACCAGTGATAGTATTTTCCTCAAGTCCCATGACTTTTGTGAGTATTTACTTCGAGTCTGTGACTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS-3UTR CAA 90 bp TCTGAGCATATCCTTTCCTTATCAAAATGGAGACACAACTCAGCCCTAGTCCCATATAGTAGGCACTCCTaGGCATTTCATTCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: SEHILSLSKWRHNSALVPYSRHS*AFHSQN
Trigger: ATTTTGAGAATGAAATGCCAAGGAGTGCCTACTATA...TGGGACTAGGGCTGAGTTGTGTCTCCATTTTGATAAGGAAAGGATATGCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS CAA 90 bp ATCCAGCCCAGGTCCACAGCTCCGGCCAGCTCATTAGCGGCCTCCTaGTTAGCACGAGGCTCCTGCTCAGGACGGCCAGCGGGAGAGGGT +
Preference number: 6 (lower is better)
Translates to: IQPRSTAPASSLAAS*LARGSCSGRPAGEG
Trigger: ACCCTCTCCCGCTGGCCGTCCTGAGCAGGAGCCTCGTGCTAACAAGGAGGCCGCTAATGAGCTGGCCGGAGCTGTGGACCTGGGCTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 72 bp AGGTCCACAGCTCCGGCCAGCTCATTAGCGGCCTCCTaGTTAGCACGAGGCTCCTGCTCAGGACGGCCAGCG +
Preference number: 6 (lower is better)
Translates to: RSTAPASSLAAS*LARGSCSGRPA
Trigger: CGCTGGCCGTCCTGAGCAGGAGCCTCGTGCTAACAAGGAGGCCGCTAATGAGCTGGCCGGAGCTGTGGACCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS TCA 72 bp CCAGACTCCCGGAGCCAGGGAGGACCGCATTTTGCCTaGCCGGTACCTAAGGCTGAGTCGACGGAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PDSRSQGGPHFA*PVPKAESTEEA
Trigger: AGCCTCCTCCGTCGACTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCTGGCTCCGGGAGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS CAA 90 bp AAGGCCCGGAAGAACCAGACTCCCGGAGCCAGGGAGGACCGCATTTaGCCTGACCGGTACCTAAGGCTGAGTCGACGGAGGAGGCTACAG +
Preference number: 6 (lower is better)
Translates to: KARKNQTPGAREDRI*PDRYLRLSRRRRLQ
Trigger: CTGTAGCCTCCTCCGTCGACTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCTGGCTCCGGGAGTCTGGTTCTTCCGGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS CCA 72 bp ACCCAGGGACTGGCTCAGTGCTCCTCAGGTCTGGGCTaGTCGAGCCTCAGCCTGCGTTTGGAGAAACTGAGC +
Preference number: 6 (lower is better)
Translates to: TQGLAQCSSGLG*SSLSLRLEKLS
Trigger: GCTCAGTTTCTCCAAACGCAGGCTGAGGCTCGACCAGCCCAGACCTGAGGAGCACTGAGCCAGTCCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 72 bp CCCATGATGAACCCCCGCTTCCCCTTCCCGAACCAGTaGCCAACACAGGTCACCACAGAGGGCCAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PMMNPRFPFPNQ*PTQVTTEGQPV
Trigger: CACAGGCTGGCCCTCTGTGGTGACCTGTGTTGGCAACTGGTTCGGGAAGGGGAAGCGGGGGTTCATCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
ENST00000532000.5
CDS CCA 72 bp CGCCCCAAAGAAGCTGATGGCAGCAGGCTCTTCGCATaGCCCCTTGGAGCATTTGGCCACAGTCTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: RPKEADGSRLFA*PLGAFGHSLKA
Trigger: GGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS CAA 72 bp AAGAACCAGACTCCCGGAGCCAGGGAGGACCGCATTTaGCCTGACCGGTACCTAAGGCTGAGTCGACGGAGG +
Preference number: 6 (lower is better)
Translates to: KNQTPGAREDRI*PDRYLRLSRRR
Trigger: CCTCCGTCGACTCAGCCTTAGGTACCGGTCAGGCAAAATGCGGTCCTCCCTGGCTCCGGGAGTCTGGTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403796.7
CDS CAA 90 bp CACTGCCCGTTCACCCAGATGCCGGCGATCAGGGAGCCCAGGATGTaGCCCACAGATGTGTGGGAATTCCAGATGCCCATGATGAACCCC +
Preference number: 6 (lower is better)
Translates to: HCPFTQMPAIREPRM*PTDVWEFQMPMMNP
Trigger: GGGGTTCATCATGGGCATCTGGAATTCCCACACATCTGTGGGCAACATCCTGGGCTCCCTGATCGCCGGCATCTGGGTGAACGGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS CAA 90 bp AGCGCCCCAAAGAAGCTGATGGCAGCAGGCTCTTCGCATGGCCCCTaGGAGCATTTGGCCACAGTCTCAAGGCCGCTCTCCCTGATAGAG +
Preference number: 6 (lower is better)
Translates to: SAPKKLMAAGSSHGP*EHLATVSRPLSLIE
Trigger: CTCTATCAGGGAGAGCGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTTTGGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS GCA 72 bp GGTGGCCCTGCCATTGGTGTAGTCAGAGACGAGCCCTaGCACGATGCCGCCTATGATGCCACCAACATCGAA +
Preference number: 6 (lower is better)
Translates to: GGPAIGVVRDEP*HDAAYDATNIE
Trigger: TTCGATGTTGGTGGCATCATAGGCGGCATCGTGGCAGGGCTCGTCTCTGACTACACCAATGGCAGGGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000403796.7
CDS GCA 72 bp TGCTCCACACTGTCACGAGAGAGGCCCCGACAGAGCTaGGGGGCAAGCTATGGCTTGAACTTGGCCATGACT +
Preference number: 6 (lower is better)
Translates to: CSTLSRERPRQS*GASYGLNLAMT
Trigger: AGTCATGGCCAAGTTCAAGCCATAGCTTGCCCCGCAGCTCTGTCGGGGCCTCTCTCGTGACAGTGTGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525837.5
CDS CCA 72 bp CCTCACACACAGGCCTCCCATGGAGCAGGACCAGCCTaGGACAGCGGTGGCAGTCCAGAGAAAAGCAAACAA +
Preference number: 6 (lower is better)
Translates to: PHTQASHGAGPA*DSGGSPEKSKQ
Trigger: TTGTTTGCTTTTCTCTGGACTGCCACCGCTGTCCCAGGCTGGTCCTGCTCCATGGGAGGCCTGTGTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 72 bp AAGAAGCTGATGGCAGCAGGCTCTTCGCATGGCCCCTaGGAGCATTTGGCCACAGTCTCAAGGCCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: KKLMAAGSSHGP*EHLATVSRPLS
Trigger: GGAGAGCGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS CAA 90 bp AAGAAGCTGATGGCAGCAGGCTCTTCGCATGGCCCCTTGGAGCATTaGGCCACAGTCTCAAGGCCGCTCTCCCTGATAGAGCAGGGACTG +
Preference number: 6 (lower is better)
Translates to: KKLMAAGSSHGPLEH*ATVSRPLSLIEQGL
Trigger: CAGTCCCTGCTCTATCAGGGAGAGCGGCCTTGAGACTGTGGCCAAATGCTCCAAGGGGCCATGCGAAGAGCCTGCTGCCATCAGCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS CAA 90 bp GCTCAGTGCTCCTCAGGTCTGGGCTGGTCGAGCCTCAGCCTGCGTTaGGAGAAACTGAGCGCTGGGCTGATTCCCACGAGAAATGAGGTT +
Preference number: 6 (lower is better)
Translates to: AQCSSGLGWSSLSLR*EKLSAGLIPTRNEV
Trigger: AACCTCATTTCTCGTGGGAATCAGCCCAGCGCTCAGTTTCTCCAAACGCAGGCTGAGGCTCGACCAGCCCAGACCTGAGGAGCACTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 90 bp GAGCCGCTGCCTCTGCTCAGGGACACCTTCCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGGAGCAAGCAGGCTAGGACGTCGGCA +
Preference number: 6 (lower is better)
Translates to: EPLPLLRDTFQAKIS*YTNRQRSKQARTSA
Trigger: TGCCGACGTCCTAGCCTGCTTGCTCCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTGGAAGGTGTCCCTGAGCAGAGGCAGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308074.4
ENST00000525837.5
CDS CAA 90 bp CACCCGCTGCCTCTGCTCAGGGACACCTTCCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGGAGCAAGCAGGCTAGGACGTCGGCA +
Preference number: 6 (lower is better)
Translates to: HPLPLLRDTFQAKIS*YTNRQRSKQARTSA
Trigger: TGCCGACGTCCTAGCCTGCTTGCTCCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTGGAAGGTGTCCCTGAGCAGAGGCAGCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS TCA 72 bp GATAGCAGGCGTAAATTAGGAAGGTCAGCAGCAGGATaGGGCCTCGGAACCAGCTGTCCCTGGAGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: DSRRKLGRSAAG*GLGTSCPWRRP
Trigger: GGGCCTTCTCCAGGGACAGCTGGTTCCGAGGCCTCATCCTGCTGCTGACCTTCCTAATTTACGCCTGCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS TCA 72 bp GGCAAAGGAGCAAGCAGGCTAGGACGTCGGCAGAGATaGGCATGTAGAAGACATTGTTCCAGCCCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: GKGASRLGRRQR*ACRRHCSSPWG
Trigger: CCCCCACGGGCTGGAACAATGTCTTCTACATGCTCATCTCTGCCGACGTCCTAGCCTGCTTGCTCCTTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308074.4
ENST00000354617.5
ENST00000403796.7
ENST00000525837.5
ENST00000526405.5
CDS CAA 72 bp TTCACCCAGATGCCGGCGATCAGGGAGCCCAGGATGTaGCCCACAGATGTGTGGGAATTCCAGATGCCCATG +
Preference number: 6 (lower is better)
Translates to: FTQMPAIREPRM*PTDVWEFQMPM
Trigger: CATGGGCATCTGGAATTCCCACACATCTGTGGGCAACATCCTGGGCTCCCTGATCGCCGGCATCTGGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
CDS CAA 90 bp TACCCGCTGCCTCTGCTCAGGGACACCTTCCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGGAGCAAGCAGGCTAGGACGTCGGCA +
Preference number: 6 (lower is better)
Translates to: YPLPLLRDTFQAKIS*YTNRQRSKQARTSA
Trigger: TGCCGACGTCCTAGCCTGCTTGCTCCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTGGAAGGTGTCCCTGAGCAGAGGCAGCGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354617.5
ENST00000403796.7
CDS CAA 90 bp AGCACGTTGGGGACCCAACTGGGACCCTCCATGCTGCTGTTCCAATaGGGGCCTCATATTTCTTTATACCCGCTGCCTCTGCTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: STLGTQLGPSMLLFQ*GPHISLYPLPLLRD
Trigger: GTCCCTGAGCAGAGGCAGCGGGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354617.5
ENST00000403796.7
CDS GCA 72 bp AGGCCACAAAACAAAGAGTCACGGTGTCCACAAAGCTaGCCTAGTGCTCCACACTGTCACGAGAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: RPQNKESRCPQS*PSAPHCHERGP
Trigger: GGGGCCTCTCTCGTGACAGTGTGGAGCACTAGGGCAGCTTTGTGGACACCGTGACTCTTTGTTTTGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525837.5
CDS CCA 72 bp CCAACACAGGTCACCACAGAGGGCCAGCCTGTGGTCTaGACGAGTCCATTACAGACCTGGATGACCACAAAG +
Preference number: 6 (lower is better)
Translates to: PTQVTTEGQPVV*TSPLQTWMTTK
Trigger: CTTTGTGGTCATCCAGGTCTGTAATGGACTCGTCCAGACCACAGGCTGGCCCTCTGTGGTGACCTGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
ENST00000532000.5
CDS CAA 72 bp TGTTCTGCATACCCCAGGCAGAGGGGCCAGATGACCTaGGTTTCTGAACTTCAGGAGGCACTTGCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: CSAYPRQRGQMT*VSELQEALAAQ
Trigger: CTGAGCTGCAAGTGCCTCCTGAAGTTCAGAAACCAAGGTCATCTGGCCCCTCTGCCTGGGGTATGCAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 90 bp AGCACGTTGGGGACCCAACTGGGACCCTCCATGCTGCTGTTCCAATaGGGGCCTCATATTTCTTTATACCTGCATGAAGAGGAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: STLGTQLGPSMLLFQ*GPHISLYLHEEERG
Trigger: CCCCCTCTCCTCTTCATGCAGGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS TCA 72 bp GGTCTGATGGAGTGCTATGCCCAAGGTCTCATGGAGTaGGTGGAGAAAGCAGGACTGTCCAGGGGTTTTTGG +
Preference number: 6 (lower is better)
Translates to: GLMECYAQGLME*VEKAGLSRGFW
Trigger: CCAAAAACCCCTGGACAGTCCTGCTTTCTCCACTCACTCCATGAGACCTTGGGCATAGCACTCCATCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp GGAGCACGTTGGGGACCCAACTGGGACCCTCCATGCTaGTGTTCCAATTGGGGCCTCATATTTCTTTATACC +
Preference number: 6 (lower is better)
Translates to: GARWGPNWDPPC*CSNWGLIFLYT
Trigger: GGTATAAAGAAATATGAGGCCCCAATTGGAACAGCAGCATGGAGGGTCCCAGTTGGGTCCCCAACGTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354617.5
ENST00000403796.7
ENST00000526405.5
CDS GCA 72 bp AGTCGCAGCTCAGAGGGAAACTGGTTTCCCTATTTCTaGCTCCTCTGTCCCCGAGGGCATGTCCAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: SRSSEGNWFPYF*LLCPRGHVQSS
Trigger: AGAACTTTGGACATGCCCTCGGGGACAGAGGAGGCAGAAATAGGGAAACCAGTTTCCCTCTGAGCTGCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 72 bp CCTCTGCTCAGGGACACCTTCCAGGCCAAGATCTCTTaGTATACTAACCGGCAAAGGAGCAAGCAGGCTAGG +
Preference number: 6 (lower is better)
Translates to: PLLRDTFQAKIS*YTNRQRSKQAR
Trigger: CCTAGCCTGCTTGCTCCTTTGCCGGTTAGTATACAAAGAGATCTTGGCCTGGAAGGTGTCCCTGAGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308074.4
ENST00000354617.5
ENST00000403796.7
ENST00000525837.5
ENST00000526405.5
CDS GCA 72 bp TGGTGGTTCAGAGAATCTGGGTCTGATGGAGTGCTATaGCCAAGGTCTCATGGAGTGAGTGGAGAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: WWFRESGSDGVL*PRSHGVSGESR
Trigger: CCTGCTTTCTCCACTCACTCCATGAGACCTTGGGCATAGCACTCCATCAGACCCAGATTCTCTGAACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 72 bp GCAGGACAGAGGATTTGCATGCAGCCCCCACTCAAATaGCACTCGAGTCACAGACTCGAAGTAAATACTCAC +
Preference number: 6 (lower is better)
Translates to: AGQRICMQPPLK*HSSHRLEVNTH
Trigger: GTGAGTATTTACTTCGAGTCTGTGACTCGAGTGCCATTTGAGTGGGGGCTGCATGCAAATCCTCTGTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525837.5
ENST00000526405.5
CDS CAA 90 bp CAAGCTCACACGTCTAAAGCCAGACACAATTCCAGGACAGAGCAGTaGCTCACTAAATCCTCCTCGCTTTCTGCTGCTCTTCTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: QAHTSKARHNSRTEQ*LTKSSSLSAALLPF
Trigger: GAAGGGAAGAAGAGCAGCAGAAAGCGAGGAGGATTTAGTGAGCAACTGCTCTGTCCTGGAATTGTGTCTGGCTTTAGACGTGTGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp ATCTCAGACCCCTTGGAAAACACTTCCCAAGCACCATaGTCTGCTGAGGTTGAAAGTCTTTACAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: ISDPLENTSQAP*SAEVESLYNWP
Trigger: GGGCCAGTTGTAAAGACTTTCAACCTCAGCAGAGCATGGTGCTTGGGAAGTGTTTTCCAAGGGGTCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp GACAGTAGGCAGAGAGCACACCAGGCCAGCCACCCATaGTTGATTCACATTTGTTTCAGAGACTTTGATTGG +
Preference number: 6 (lower is better)
Translates to: DSRQRAHQASHP*LIHICFRDFDW
Trigger: CCAATCAAAGTCTCTGAAACAAATGTGAATCAAGCATGGGTGGCTGGCCTGGTGTGCTCTCTGCCTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp CGTCTAAAGCCAGACACAATTCCAGGACAGAGCAGTTaGTCACTAAATCCTCCTCGCTTTCTGCTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: RLKPDTIPGQSS*SLNPPRFLLLF
Trigger: GAAGAGCAGCAGAAAGCGAGGAGGATTTAGTGAGCAACTGCTCTGTCCTGGAATTGTGTCTGGCTTTAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp CAGGACTGTCCAGGGGTTTTTGGATTCCAAGCACAGTaGTCTGTCTGCTCTGATAAATCACTGCACACCTCA +
Preference number: 6 (lower is better)
Translates to: QDCPGVFGFQAQ*SVCSDKSLHTS
Trigger: TGAGGTGTGCAGTGATTTATCAGAGCAGACAGAGCACTGTGCTTGGAATCCAAAAACCCCTGGACAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 72 bp GTATCATTGATGGGTTTGATCTGCTCCGAGCAGTTCTaGTGCAGACGGCTCTTGACGATACTGATAGGCTTC +
Preference number: 6 (lower is better)
Translates to: VSLMGLICSEQF*CRRLLTILIGF
Trigger: GAAGCCTATCAGTATCGTCAAGAGCCGTCTGCACCAGAACTGCTCGGAGCAGATCAAACCCATCAATGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
ENST00000532000.5
CDS CCA 72 bp TTACAGACCTGGATGACCACAAAGTACCAGAGCTCGTaGATGTTCCAGAAATATCCCAGGCCAAAGAGCGAG +
Preference number: 6 (lower is better)
Translates to: LQTWMTTKYQSS*MFQKYPRPKSE
Trigger: CTCGCTCTTTGGCCTGGGATATTTCTGGAACATCCACGAGCTCTGGTACTTTGTGGTCATCCAGGTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308074.4
ENST00000403796.7
ENST00000526405.5
ENST00000532000.5
CDS CAA 72 bp GAAAGTTGGAAAAAGTCATACTGCAGGACAGAGGATTaGCATGCAGCCCCCACTCAAATGGCACTCGAGTCA +
Preference number: 6 (lower is better)
Translates to: ESWKKSYCRTED*HAAPTQMALES
Trigger: TGACTCGAGTGCCATTTGAGTGGGGGCTGCATGCAAATCCTCTGTCCTGCAGTATGACTTTTTCCAACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525837.5
ENST00000526405.5
CDS CAA 90 bp GAAGAAAGAGAAAGTTGGAAAAAGTCATACTGCAGGACAGAGGATTaGCATGCAGCCCCCACTCAAATGGCACTCGAGTCACAGACTCGA +
Preference number: 6 (lower is better)
Translates to: EERESWKKSYCRTED*HAAPTQMALESQTR
Trigger: TCGAGTCTGTGACTCGAGTGCCATTTGAGTGGGGGCTGCATGCAAATCCTCTGTCCTGCAGTATGACTTTTTCCAACTTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525837.5
ENST00000526405.5
CDS CAA 90 bp CAGACCCCTTGGAAAACACTTCCCAAGCACCATGCTCTGCTGAGGTaGAAAGTCTTTACAACTGGCCCACAAGAAGAAAGAGAAAGTTGG +
Preference number: 6 (lower is better)
Translates to: QTPWKTLPKHHALLR*KVFTTGPQEERESW
Trigger: CCAACTTTCTCTTTCTTCTTGTGGGCCAGTTGTAAAGACTTTCAACCTCAGCAGAGCATGGTGCTTGGGAAGTGTTTTCCAAGGGGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS TCA 72 bp ATACATAAAGATGTGGTGGTTCAGAGAATCTGGGTCTaGTGGAGTGCTATGCCCAAGGTCTCATGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: IHKDVVVQRIWV*WSAMPKVSWSE
Trigger: CTCACTCCATGAGACCTTGGGCATAGCACTCCATCAGACCCAGATTCTCTGAACCACCACATCTTTATGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 72 bp AGGGATAAGCATCCCCATTCATACATAAAGATGTGGTaGTTCAGAGAATCTGGGTCTGATGGAGTGCTATGC +
Preference number: 6 (lower is better)
Translates to: RDKHPHSYIKMW*FRESGSDGVLC
Trigger: GCATAGCACTCCATCAGACCCAGATTCTCTGAACCACCACATCTTTATGTATGAATGGGGATGCTTATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS GCA 72 bp TCACATATCCCATTTATCTCAGCCTTGGGTCAATTCTaGCAGGTATTCAGGGATAAGCATCCCCATTCATAC +
Preference number: 6 (lower is better)
Translates to: SHIPFISALGQF*QVFRDKHPHSY
Trigger: GTATGAATGGGGATGCTTATCCCTGAATACCTGGCAGAATTGACCCAAGGCTGAGATAAATGGGATATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CCA 72 bp ACAAAGCAATATCACATATCCCATTTATCTCAGCCTTaGGTCAATTCTGCCAGGTATTCAGGGATAAGCATC +
Preference number: 6 (lower is better)
Translates to: TKQYHISHLSQP*VNSARYSGISI
Trigger: GATGCTTATCCCTGAATACCTGGCAGAATTGACCCAAGGCTGAGATAAATGGGATATGTGATATTGCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5
CDS CAA 72 bp TACAAAGCAATATCACATATCCCATTTATCTCAGCCTaGGGTCAATTCTGCCAGGTATTCAGGGATAAGCAT +
Preference number: 6 (lower is better)
Translates to: YKAISHIPFISA*GQFCQVFRDKH
Trigger: ATGCTTATCCCTGAATACCTGGCAGAATTGACCCAAGGCTGAGATAAATGGGATATGTGATATTGCTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526405.5