RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC37A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160190

Ensembl transcript IDs: ENST00000352133.3, ENST00000398341.7, ENST00000398343.2, ENST00000419522.5, ENST00000454800.1, ENST00000471277.5, ENST00000484887.1, ENST00000487951.1, ENST00000496416.1

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGGGATGACGGTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTaGGTGCCTCCAACCGGAGGTGCTTCCTGCCTCCTCACCCTTGGC +
Preference number: 1 (lower is better)
Translates to: GWDDGDFGALCGWQA*VPPTGGASCLLTLG
Trigger: GCCAAGGGTGAGGAGGCAGGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCACCGTCATCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp AGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTaGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCTGAG +
Preference number: 1 (lower is better)
Translates to: SEAGCWAWTRQSQCR*GDRFPNLCCAPVPE
Trigger: CTCAGGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR GCA 90 bp TTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTaGCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTG +
Preference number: 1 (lower is better)
Translates to: LWSEAGCWAWTRQSQ*RWGDRFPNLCCAPV
Trigger: CACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp TCCCAGGTGTGGTGTGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTaGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAAC +
Preference number: 1 (lower is better)
Translates to: SQVWCVLWSEAGCWA*TRQSQCRWGDRFPN
Trigger: GTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACACACCACACCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR TCA 90 bp GGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCAC +
Preference number: 1 (lower is better)
Translates to: GSELRLGFQPGCRPS*CCVALALCFSAGRH
Trigger: GTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp TTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTaGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: LVSNLVVGLLDVVWR*LSASLLAGTVWWAL
Trigger: CAGAGCCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp TCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTaGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGG +
Preference number: 1 (lower is better)
Translates to: SVLVSNLVVGLLDVV*RWLSASLLAGTVWW
Trigger: CCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp GTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTT +
Preference number: 1 (lower is better)
Translates to: VVWRWLSASLLAGTV*WALVSCFSMWHIQV
Trigger: AACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 90 bp TCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTaGCCGGCACTGTCTGGTGGGCTCTGGTGTCCTGTTTTTCCATGT +
Preference number: 1 (lower is better)
Translates to: SAFLMLCGAGSLLLC*PALSGGLWCPVFPC
Trigger: ACATGGAAAAACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR TCA 90 bp AACATCATGGGTGCTGGAAAAGCCTCTGGGGCGATGTGGTGGGTCTaGGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATG +
Preference number: 1 (lower is better)
Translates to: NIMGAGKASGAMWWV*APSWFPTWLSAFLM
Trigger: CATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCACCCATGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGGCAGTTGTGAAGGGTaGGCCCAGACCCCCTCCACG +
Preference number: 2 (lower is better)
Translates to: GLGPANPSAGGETASQTSGSCEG*AQTPST
Trigger: CGTGGAGGGGGTCTGGGCCCACCCTTCACAACTGCC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCGGCAGTTGTGAAGGGTaGGCCCAGACCCCCTCCACG +
Preference number: 2 (lower is better)
Translates to: CHACIWVAAWAHACEARAGSCEG*AQTPST
Trigger: CGTGGAGGGGGTCTGGGCCCACCCTTCACAACTGCC...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGGGCGCTCTGTGGCTaGCAAGCCTGGGTGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LGPANPSAGGETASQTSAGALCG*QAWVPP
Trigger: TGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCTTTGGGGCGCTCTGTaGCTGGCAAGCCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRLWGAL*LASLGA
Trigger: GGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAG...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCCTTGAAAGGCAGTTGTaGAGGGTGGGCCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPLERQL*RVGPDP
Trigger: GGGGTCTGGGCCCACCCTTCACAACTGCCTTTCAAG...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCTCTGCTTCTCTGCTaGCCGGCACTGTCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: KPVAGLGPANPSAGGETASLLLC*PALSGG
Trigger: CCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGA...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCAGGAAGGCCAGGGGCTaGGATGACGGTGACTTTGGG +
Preference number: 2 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPRKARG*DDGDFG
Trigger: CCCAAAGTCACCGTCATCCCAGCCCCTGGCCTTCCT...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTAGGAAGGCCAGGGGCTaGGATGACGGTGACTTTGGG +
Preference number: 2 (lower is better)
Translates to: KPVAGLGPANPSAGGETARKARG*DDGDFG
Trigger: CCCAAAGTCACCGTCATCCCAGCCCCTGGCCTTCCT...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 90 bp GTCCCAGGTGTGGTGTGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTaGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: VPGVVCVVERSRLLG*DPPIPVPVGRPLPK
Trigger: TTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACACACCACACCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCTTGAAAGGCAGTTGTaGAGGGTGGGCCCAGACCCC +
Preference number: 2 (lower is better)
Translates to: FGALCGWQAWVPPTGGASLERQL*RVGPDP
Trigger: GGGGTCTGGGCCCACCCTTCACAACTGCCTTTCAAG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLLAGTV*WALVSC
Trigger: ACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTGCTGGAAAAGCCTCTaGGGCGATGTGGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: KPVAGLGPANPSAGGETACWKSL*GDVVGL
Trigger: CAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCA...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRGCRPS*CCVALA
Trigger: AGCCAGCGCCACACAACATCAAGAAGGCCGACAACC...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GLGPANPSAGGETASQTSGCRPS*CCVALA
Trigger: AGCCAGCGCCACACAACATCAAGAAGGCCGACAACC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGGCGATGTGGTGGGTCTaGGCTCCGTCTTGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVAMWWV*APSWFP
Trigger: TGGAAACCAAGACGGAGCTCAGACCCACCACATCGC...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCGCTTCCCAAACCTCTaGTGTGCCCCTGTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPRFPNL*CAPVPE
Trigger: CTCAGGCACAGGGGCACAGCAGAGGTTTGGGAAGCG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTACGCGTGCATTTGGGTaGCTGCATGGGCACACGCCT +
Preference number: 2 (lower is better)
Translates to: LGPANPSAGGETASQTSATRAFG*LHGHTP
Trigger: AGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGT...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCACATACAGGTTCTCTaGAGCCACAGCCAGCGCAGT +
Preference number: 2 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAHIQVL*SHSQRS
Trigger: ACTGCGCTGGCTGTGGCTTCAGAGAACCTGTATGTG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGTTCTGTGGCTGGAATaGCTGAGAGGGTCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLVLWLE*LRGSGL
Trigger: TAGCCCCGACCCTCTCAGGCATTCCAGCCACAGAAC...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGGGTCTTCGGTTCTCTaGCTTGGCTCAGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTGSSVL*LGSGSS
Trigger: ACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGGGTCTTCGGTTCTCTaGCTTGGCTCAGGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPGSSVL*LGSGSS
Trigger: ACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 90 bp TTAAAAACAGTCCCAGGTGTGGTGTGTGTTGTGGAGCGAAGCCGGTaGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCG +
Preference number: 2 (lower is better)
Translates to: LKTVPGVVCVVERSR*LGLDPPIPVPVGRP
Trigger: CGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACACACCACACCTGGGACTGTTTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCCTTGTTGTCACGCGTaGATTTGGGTGGCTGCATGG +
Preference number: 2 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPPCCHA*IWVAAW
Trigger: CCATGCAGCCACCCAAATGCACGCGTGACAACAAGG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCCGAAACATCATGGGTaGTGGAAAAGCCTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LGPANPSAGGETASQTSAPKHHG*WKSLWG
Trigger: GCCCCAGAGGCTTTTCCAGCACCCATGATGTTTCGG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCCGAAACATCATGGGTaGTGGAAAAGCCTCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLPKHHG*WKSLWG
Trigger: GCCCCAGAGGCTTTTCCAGCACCCATGATGTTTCGG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTTCGGTTCTCTGGCTTaGCTCAGGCAGCAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTFGSLA*LRQQFL
Trigger: CAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCAAACATCATGGGTGCTaGAAAAGCCTCTGGGGCGAT +
Preference number: 2 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPKHHGC*KSLWGD
Trigger: ATCGCCCCAGAGGCTTTTCCAGCACCCATGATGTTT...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGTGGCTGGAATGCCTaGGAGGGTCGGGGCTACCTG +
Preference number: 2 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSCGWNA*EGRGYL
Trigger: CAGGTAGCCCCGACCCTCTCAGGCATTCCAGCCACA...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCACTTTGATGTTCTGTaGCTGGAATGCCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: FGALCGWQAWVPPTGGASHFDVL*LECLRG
Trigger: CCCTCTCAGGCATTCCAGCCACAGAACATCAAAGTG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCTTCTTGATGTTGTGTaGCGCTGGCTCTCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCALLDVV*RWLSAS
Trigger: AGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCAGTCCGAAACATCATaGGTGCTGGAAAAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVQSETS*VLEKPL
Trigger: CAGAGGCTTTTCCAGCACCCATGATGTTTCGGACTG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCAGTACTCGCTCACTTTaGTGTTCTGTGGCTGGAATG +
Preference number: 2 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCASTRSL*CSVAGM
Trigger: CATTCCAGCCACAGAACATCAAAGTGAGCGAGTACT...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGTTTTCCAGGTGCGTGTaGAAAAGGCAAAGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPFSRCV*KRQREV
Trigger: GACCTCCCTTTGCCTTTTGCACACGCACCTGGAAAA...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTTTTCCAGGTGCGTGTaGAAAAGGCAAAGGGAGGTC +
Preference number: 2 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTFSRCV*KRQREV
Trigger: GACCTCCCTTTGCCTTTTGCACACGCACCTGGAAAA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTTGTCACGCGTGCATTTaGGTGGCTGCATGGGCACAC +
Preference number: 2 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGCHACI*VAAWAH
Trigger: GTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGTCACGCGTGCATTTaGGTGGCTGCATGGGCACAC +
Preference number: 2 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVCHACI*VAAWAH
Trigger: GTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCACTTTGATGTTCTGTaGCTGGAATGCCTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LGPANPSAGGETASQTSAHFDVL*LECLRG
Trigger: CCCTCTCAGGCATTCCAGCCACAGAACATCAAAGTG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRLAGTV*WALVSC
Trigger: ACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAG...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCAGTCCGAAACATCATaGGTGCTGGAAAAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPQSETS*VLEKPL
Trigger: CAGAGGCTTTTCCAGCACCCATGATGTTTCGGACTG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTCACATACAGGTTCTCTaGAGCCACAGCCAGCGCAGT +
Preference number: 2 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGHIQVL*SHSQRS
Trigger: ACTGCGCTGGCTGTGGCTTCAGAGAACCTGTATGTG...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCGGCTCTCTGCTTCTCTaGTGGCCGGCACTGTCTGGT +
Preference number: 2 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRGSLLL*WPALSG
Trigger: ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCC...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGATTTGGGTGGCTGCATaGGCACACGCCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLIWVAA*AHACEA
Trigger: GGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAAT...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTCTCTGCTTCTCTGCTaGCCGGCACTGTCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRSLLLC*PALSGG
Trigger: CCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGA...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCGCCGGCACTGTCTGGTaGGCTCTGGTGTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRAGTVW*ALVSCF
Trigger: AAAACAGGACACCAGAGCCCACCAGACAGTGCCGGC...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAACGCGTGCATTTGGGTaGCTGCATGGGCACACGCCT +
Preference number: 2 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATTRAFG*LHGHTP
Trigger: AGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGT...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAAGGCAGTTGTGAAGGGTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VCKRQREVTLSMQGP*SELSLKGSCEGWAQ
Trigger: CTGGGCCCACCCTTCACAACTGCCTTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGTCTGAACTGTCCTTaGAAGGCAGTTGTGAAGGGT +
Preference number: 2 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVCLNCP*KAVVKG
Trigger: ACCCTTCACAACTGCCTTTCAAGGACAGTTCAGACA...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTAGGTCACTCTTTCCATaGAGGGCCCTTTGTCTGAAC +
Preference number: 2 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSRSLFP*RALCLN
Trigger: GTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCT...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 90 bp AAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTGCCTCCTCACCCTaGGCTTCTCGACAATTAGTTTTTAGGTCAGTCCGAAACATCATG +
Preference number: 2 (lower is better)
Translates to: KPGCLQPEVLPASSP*ASRQLVFRSVRNIM
Trigger: CATGATGTTTCGGACTGACCTAAAAACTAATTGTCGAGAAGCCAAGGGTGAGGAGGCAGGAAGCACCTCCGGTTGGAGGCACCCAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGTCTGAACTGTCCTTaGAAGGCAGTTGTGAAGGGT +
Preference number: 2 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRCLNCP*KAVVKG
Trigger: ACCCTTCACAACTGCCTTTCAAGGACAGTTCAGACA...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAAGGTCACTCTTTCCATaGAGGGCCCTTTGTCTGAAC +
Preference number: 2 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATRSLFP*RALCLN
Trigger: GTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCT...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGCTGGCAAGCCTGGGTaGCTCCAACCGGAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCAGKPG*LQPEVL
Trigger: AAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR GCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTTGGAGCGAAGCCGGTTaGTGGGCTTGGACCCGCCAA +
Preference number: 2 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCWSEAG*WAWTRQ
Trigger: TTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCA...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR TCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGCAGGGCCCTTTGTCTaGACTGTCCTTGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCAGPFV*TVLERQ
Trigger: CTGCCTTTCAAGGACAGTTCAGACAAAGGGCCCTGC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp CGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATaGGCACACGCCTGTGAGGCCAGGGCCGGCCGGGTC +
Preference number: 3 (lower is better)
Translates to: RPCCHACIWVAA*AHACEARAGRV
Trigger: GACCCGGCCGGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTaGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: HPPGLVVTRAFG*LHGHTPVRPGP
Trigger: CGGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp CCCCCACCCTCCCGGCCTTGTTGTCACGCGTGCATTTaGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: PPPSRPCCHACI*VAAWAHACEAR
Trigger: CCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTCCCACCCTCCCGGCCTaGTTGTCACGCGTGCATTTG +
Preference number: 3 (lower is better)
Translates to: KPVAGLGPANPSAGGETAPTLPA*LSRVHL
Trigger: CAAATGCACGCGTGACAACAAGGCCGGGAGGGTGGG...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR GCA 72 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTaGCTCCAACCGGAGGTGCTTCCTGCCTCCTCACCC +
Preference number: 3 (lower is better)
Translates to: VTLGRSVAGKPG*LQPEVLPASSP
Trigger: GGGTGAGGAGGCAGGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp GACGGTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTaGGTGCCTCCAACCGGAGGTGCTTCCTGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: DGDFGALCGWQA*VPPTGGASCLL
Trigger: GAGGAGGCAGGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCACCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp GGCTGGGATGACGGTGACTTTGGGGCGCTCTGTGGCTaGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: GWDDGDFGALCG*QAWVPPTGGAS
Trigger: GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCACCGTCATCCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp GGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTaGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCT +
Preference number: 3 (lower is better)
Translates to: GCWAWTRQSQCR*GDRFPNLCCAP
Trigger: AGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCCCACCCTCCCGGCCTaGTTGTCACGCGTGCATTTG +
Preference number: 3 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVPTLPA*LSRVHL
Trigger: CAAATGCACGCGTGACAACAAGGCCGGGAGGGTGGG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR GCA 72 bp GAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTaGCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGT +
Preference number: 3 (lower is better)
Translates to: EAGCWAWTRQSQ*RWGDRFPNLCC
Trigger: ACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR GCA 72 bp TCCCAGGTGTGGTGTGTGTTGTGGAGCGAAGCCGGTTaGTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGG +
Preference number: 3 (lower is better)
Translates to: SQVWCVLWSEAG*WAWTRQSQCRW
Trigger: CCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACACACCACACCTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTCTTCGGTTCTCTGGCTaGGCTCAGGCAGCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: KPVAGLGPANPSAGGETALRFSG*AQAAVP
Trigger: AGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAG...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCTTCGGTTCTCTGGCTaGGCTCAGGCAGCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: GLGPANPSAGGETASQTSLRFSG*AQAAVP
Trigger: AGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGTCGGCCTTCTTGATGTaGTGTGGCGCTGGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVSAFLM*CGAGSL
Trigger: CAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGA...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTCGGCCTTCTTGATGTaGTGTGGCGCTGGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: FGALCGWQAWVPPTGGASSAFLM*CGAGSL
Trigger: CAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGA...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTTGGTTGTCGGCCTTCTaGATGTTGTGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: GLGPANPSAGGETASQTSWLSAF*MLCGAG
Trigger: GCCAGCGCCACACAACATCAAGAAGGCCGACAACCA...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCGGTCTGAGCTCCGTCTaGGTTTCCAACCTGGTTGTC +
Preference number: 3 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPGLSSV*VSNLVV
Trigger: GACAACCAGGTTGGAAACCAAGACGGAGCTCAGACC...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTTTGTCACGCGTGCATTaGGGTGGCTGCATGGGCACA +
Preference number: 3 (lower is better)
Translates to: LGPANPSAGGETASQTSALSRVH*GGCMGT
Trigger: TGTGCCCATGCAGCCACCCAAATGCACGCGTGACAA...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGTGGTTGTCGGCCTTCTaGATGTTGTGTGGCGCTGGC +
Preference number: 3 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPWLSAF*MLCGAG
Trigger: GCCAGCGCCACACAACATCAAGAAGGCCGACAACCA...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCCTGCCTCCTCACCCTaGGCTTCTCGACAATTAGTT +
Preference number: 3 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGPASSP*ASRQLV
Trigger: AACTAATTGTCGAGAAGCCAAGGGTGAGGAGGCAGG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTGGTTTCCAACCTGGTaGTCGGCCTTCTTGATGTTG +
Preference number: 3 (lower is better)
Translates to: KPVAGLGPANPSAGGETAWFPTW*SAFLML
Trigger: CAACATCAAGAAGGCCGACAACCAGGTTGGAAACCA...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR TCA 72 bp GGTGCTGGAAAAGCCTCTGGGGCGATGTGGTGGGTCTaGGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCC +
Preference number: 3 (lower is better)
Translates to: GAGKASGAMWWV*APSWFPTWLSA
Trigger: GGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp CGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGTTTTTCCATGTGGCAC +
Preference number: 3 (lower is better)
Translates to: RWLSASLLAGTV*WALVSCFSMWH
Trigger: GTGCCACATGGAAAAACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTaGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGG +
Preference number: 3 (lower is better)
Translates to: NLVVGLLDVVWR*LSASLLAGTVW
Trigger: CCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGGTTTCCAACCTGGTaGTCGGCCTTCTTGATGTTG +
Preference number: 3 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLWFPTW*SAFLML
Trigger: CAACATCAAGAAGGCCGACAACCAGGTTGGAAACCA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGACCCTCCCGGCCTTGTaGTCACGCGTGCATTTGGGT +
Preference number: 3 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLTLPAL*SRVHLG
Trigger: ACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGT...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CCA 72 bp GTCAGTCCGAAACATCATGGGTGCTGGAAAAGCCTCTaGGGCGATGTGGTGGGTCTGAGCTCCGTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: VSPKHHGCWKSL*GDVVGLSSVLV
Trigger: AACCAAGACGGAGCTCAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCACCCATGATGTTTCGGACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAACCCTCCCGGCCTTGTaGTCACGCGTGCATTTGGGT +
Preference number: 3 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATTLPAL*SRVHLG
Trigger: ACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGT...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR TCA 72 bp CTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: LRLGFQPGCRPS*CCVALALCFSA
Trigger: AGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAA +
Preference number: 3 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLSMQGP*SELSLK
Trigger: TTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCAGTACTCGCTCACTTaGATGTTCTGTGGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLQYSLT*MFCGWN
Trigger: ATTCCAGCCACAGAACATCAAAGTGAGCGAGTACTG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGTGGAGCGAAGCCGGTaGCTGGGCTTGGACCCGCCA +
Preference number: 3 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCVERSR*LGLDPP
Trigger: TGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCAC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACACAGTACTCGCTCACTTaGATGTTCTGTGGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATQYSLT*MFCGWN
Trigger: ATTCCAGCCACAGAACATCAAAGTGAGCGAGTACTG...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAA +
Preference number: 3 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCSMQGP*SELSLK
Trigger: TTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGA...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGGTCCCCGGAGGAGGTaGATTCCGCGGGCACGCCCA +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSGPRRR*IPRARP
Trigger: TGGGCGTGCCCGCGGAATTCACCTCCTCCGGGGACC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCGAGCCAGCGTTCTGTaGCGGCTCCTCCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASRASVL*RLLPGR
Trigger: CCGCCCAGGGAGGAGCCGGCACAGAACGCTGGCTCG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCGCAAAGGCCCAGGGTaGCGGCGCTCCGAGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLRKGPG*RRSEPA
Trigger: CGCTGGCTCGGAGCGCCGGCACCCTGGGCCTTTGCG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCAGGGGGCCCAGGGCTaGTCCTACAGAGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASQGAQG*SYRARP
Trigger: GGGACGGGCTCTGTAGGAGCAGCCCTGGGCCCCCTG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGAGTTGCCGAGGCAGGTaGCGACGCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPSCRGR*RRWASR
Trigger: CCGGCTGGCCCAGCGTCGTCACCTGCCTCGGCAACT...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGAGTTGCCGAGGCAGGTaGCGACGCTGGGCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTSCRGR*RRWASR
Trigger: CCGGCTGGCCCAGCGTCGTCACCTGCCTCGGCAACT...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCCGGAATCCCAGCGTTaGCCCGGTCCGGGAACGCCC +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPPESQR*PGPGTP
Trigger: GGGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTCATCGCGGCAGACAATaGGCAGGGTCCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAHRGRQ*AGSPPA
Trigger: GGCAGGAGGGGACCCTGCGCATTGTCTGCCGCGATG...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTCCTCCCTGGGCGGCTaGTCCCCGGAGGAGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPSSLGG*SPEEVN
Trigger: ATTCACCTCCTCCGGGGACCAGCCGCCCAGGGAGGA...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCTTGTCAGGGAGCTGGTaGGGGGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGLSGSW*GAADPD
Trigger: GTCTGGGTCCGCTGCCCCCCACCAGCTCCCTGACAA...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCGGGGCGCTCTGTGGCTaGCAAGCCTGGGTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASGALCG*QAWVPP
Trigger: TGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCC...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCGTCCCCGGGGAGAATaGCGACGTGGTTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVRPRGE*RRGSGG
Trigger: TCCACCCGAACCACGTCGTCATTCTCCCCGGGGACG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCGTGCCCGCTCCCTCTaGCTCCACTTCCCCGGAATC +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSRARSL*LHFPGI
Trigger: GATTCCGGGGAAGTGGAGGCAGAGGGAGCGGGCACG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCACCCGCCAATCCCAGTaGCGGTGGGGAGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASTRQSQ*RWGDRF
Trigger: GAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGT...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGACCCGCCAATCCCAGTaGCGGTGGGGAGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVTRQSQ*RWGDRF
Trigger: GAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGT...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGGCAGGGGACCCGGCTaGACAGCTAAGCTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTGRGPG*TAKLAP
Trigger: AGGGGCGAGCTTAGCTGTCCAGCCGGGTCCCCTGCC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGGGCTGGAAGGCTGGTaGCCAGCGGCGAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLGLEGW*PAARGL
Trigger: AAGTCCCCTCGCCGCTGGCCACCAGCCTTCCAGCCC...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCCCCCTCCACGGGACTaGGGTGGGGTGTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAPPPRD*GGVSLF
Trigger: GAACAGTGACACCCCACCCCAGTCCCGTGGAGGGGG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGGGCAGTTGTGAAGGGTaGGCCCAGACCCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVGSCEG*AQTPST
Trigger: CGTGGAGGGGGTCTGGGCCCACCCTTCACAACTGCC...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCTTTGGGGCGCTCTGTaGCTGGCAAGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARALWGAL*LASLGA
Trigger: GGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCCATTTACGTCGCCACTaGCCACTGAGCCTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPHLRRH*PLSLGR
Trigger: GCGACCGAGGCTCAGTGGTCAGTGGCGACGTAAATG...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGTGGCTGGAATGCCTaGGAGGGTCGGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRCGWNA*EGRGYL
Trigger: CAGGTAGCCCCGACCCTCTCAGGCATTCCAGCCACA...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGCTCCGGGAACCAGCTaGTCAGCCGACAAACAACGC +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAAPGTS*SADKQR
Trigger: GCGTTGTTTGTCGGCTGAGCAGCTGGTTCCCGGAGC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTAGATCCTCTCTCTGTTaGCCCTGCCGCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETARSSLC*PCRSHR
Trigger: CCTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATCT...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCGGCTCTCTGCTTCTCTaGTGGCCGGCACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGGSLLL*WPALSG
Trigger: ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCC...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTGGAGCGAAGCCGGTTaGTGGGCTTGGACCCGCCAA +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASWSEAG*WAWTRQ
Trigger: TTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCA...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCAACCGTGGCCACTGTTaGCCTCCACTCTCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPNRGHC*PPLSRG
Trigger: CCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTT...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS-3UTR CCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTTGTCAGGGAGCTGGTaGGGGGCAGCGGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLLSGSW*GAADPD
Trigger: GTCTGGGTCCGCTGCCCCCCACCAGCTCCCTGACAA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCACAGGCCCCAGCATGTaGACACCCAGTAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPTGPSM*TPSSQR
Trigger: TCGCTGGCTACTGGGTGTCCACATGCTGGGGCCTGT...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCGCAGCAGCATGGCGATaGTGGCCTCAAGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPAAAWR*WPQAPS
Trigger: AGATGGGGCTTGAGGCCACCATCGCCATGCTGCTGC...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCCCCCTCCACGGGACTaGGGTGGGGTGTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLPPPRD*GGVSLF
Trigger: GAACAGTGACACCCCACCCCAGTCCCGTGGAGGGGG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGCAGTTGTGAAGGGTaGGCCCAGACCCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAGSCEG*AQTPST
Trigger: CGTGGAGGGGGTCTGGGCCCACCCTTCACAACTGCC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVLAGTV*WALVSC
Trigger: ACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCTTTGGGGCGCTCTGTaGCTGGCAAGCCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSALWGAL*LASLGA
Trigger: GGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGCCGGTTGCTGGGCTTaGACCCGCCAATCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTAGCWA*TRQSQC
Trigger: GCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCCGGTTGCTGGGCTTaGACCCGCCAATCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAGCWA*TRQSQC
Trigger: GCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGAGCGAAGCCGGTTGCTaGGCTTGGACCCGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVSEAGC*AWTRQS
Trigger: GGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCT...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGAGCGAAGCCGGTTGCTaGGCTTGGACCCGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRSEAGC*AWTRQS
Trigger: GGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCT...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 72 bp GTCCCAGGTGTGGTGTGTGTTGTGGAGCGAAGCCGGTaGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VPGVVCVVERSR*LGLDPPIPVPV
Trigger: CACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACACACCACACCTGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTCCGCGAAAATAGCTTaGGACCGTCCCCGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASSAKIA*DRPRLS
Trigger: CGAGAGCCGGGGACGGTCTCAAGCTATTTTCGCGGA...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR TCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCTTGAAAGGCAGTTGTaGAGGGTGGGCCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARALERQL*RVGPDP
Trigger: GGGGTCTGGGCCCACCCTTCACAACTGCCTTTCAAG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGCGATGTGGTGGGTCTaGGCTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAAMWWV*APSWFP
Trigger: TGGAAACCAAGACGGAGCTCAGACCCACCACATCGC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCTGTGCCCCTGTGCCTaGGCTGAACAGCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARALCPCA*AEQQCH
Trigger: ATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTCTCTCTGTTGCCCCTaGCGCTCCCACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRSLCCP*RSHRLE
Trigger: TTCCAGCCTGTGGGAGCGGCAGGGGCAACAGAGAGA...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCACTATCCCCATGGCTaGCACGATGGCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSHYPHG*HDGSRH
Trigger: GTGCCTGGAGCCATCGTGGCAGCCATGGGGATAGTG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTCAGGGGGCCCAGGGCTaGTCCTACAGAGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGQGAQG*SYRARP
Trigger: GGGACGGGCTCTGTAGGAGCAGCCCTGGGCCCCCTG...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGTTCTGTGGCTGGAATaGCTGAGAGGGTCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAVLWLE*LRGSGL
Trigger: TAGCCCCGACCCTCTCAGGCATTCCAGCCACAGAAC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCACCGGAGGTGCTTCCTaGCTCCTCACCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCATGGAS*LLTLGF
Trigger: GAAGCCAAGGGTGAGGAGGCAGGAAGCACCTCCGGT...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCTGGCAAGCCTGGGTaGCTCCAACCGGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAGKPG*LQPEVL
Trigger: AAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTGGAGCGAAGCCGGTTaGTGGGCTTGGACCCGCCAA +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTWSEAG*WAWTRQ
Trigger: TTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAACCAGGATTACGGCGTaGGCCGTAAGGGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPATRITA*AVRAGR
Trigger: CCTTCCAGCCCTTACGGCCCACGCCGTAATCCTGGT...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTTGCCCACGGAGGTGTaGGAGTTCCAGACCCCCATA +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETALPTEV*EFQTPI
Trigger: TATGGGGGTCTGGAACTCCCACACCTCCGTGGGCAA...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTAGCACACTATCCCCATaGCTGCCACGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETASTLSP*LPRWLQ
Trigger: CTGGAGCCATCGTGGCAGCCATGGGGATAGTGTGCT...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGGCATCAGGCCGCAGGTaGAGGCCCTTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVASGRR*RPFSPV
Trigger: GACTGGAGAAAAGGGCCTCCACCTGCGGCCTGATGC...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAGCATCAGGCCGCAGGTaGAGGCCCTTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAASGRR*RPFSPV
Trigger: GACTGGAGAAAAGGGCCTCCACCTGCGGCCTGATGC...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTAGAAGATGTAGAGCGTaGGGGCCGCGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSRRCRA*GPRAAA
Trigger: TGCTGCTGCTCGCGGCCCCCACGCTCTACATCTTCT...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAACGCGTGCATTTGGGTaGCTGCATGGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPATRAFG*LHGHTP
Trigger: AGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGT...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGCCGGCACTGTCTGGTaGGCTCTGGTGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAAGTVW*ALVSCF
Trigger: AAAACAGGACACCAGAGCCCACCAGACAGTGCCGGC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTCTCTGCTTCTCTGCTaGCCGGCACTGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASSLLLC*PALSGG
Trigger: CCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGA...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTTCTCTGCTTCTCTGCTaGCCGGCACTGTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSSLLLC*PALSGG
Trigger: CCCACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGA...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTGTGGCTGGCAAGCCTaGGTGCCTCCAACCGGAGGT +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTCGWQA*VPPTGG
Trigger: ACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCAATCCCAGTGCCGGTaGGGAGACCGCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASQSQCR*GDRFPN
Trigger: GTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCAATCCCAGTGCCGGTaGGGAGACCGCTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAQSQCR*GDRFPN
Trigger: GTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCACATACAGGTTCTCTaGAGCCACAGCCAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGHIQVL*SHSQRS
Trigger: ACTGCGCTGGCTGTGGCTTCAGAGAACCTGTATGTG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTCTCTCTGTTGCCCCTaGCGCTCCCACAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLSLCCP*RSHRLE
Trigger: TTCCAGCCTGTGGGAGCGGCAGGGGCAACAGAGAGA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGAGATCCTCTCTCTGTTaGCCCTGCCGCTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLRSSLC*PCRSHR
Trigger: CCTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATCT...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCCTTGTTGTCACGCGTaGATTTGGGTGGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGPCCHA*IWVAAW
Trigger: CCATGCAGCCACCCAAATGCACGCGTGACAACAAGG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCGCTTCCCAAACCTCTaGTGTGCCCCTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSARFPNL*CAPVPE
Trigger: CTCAGGCACAGGGGCACAGCAGAGGTTTGGGAAGCG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCGCCGCTCCCACAGGCTaGAAAGCGTGGAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARAAAPTG*KAWKEG
Trigger: ACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGC...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTTGCCCACGGAGGTGTaGGAGTTCCAGACCCCCATA +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRLPTEV*EFQTPI
Trigger: TATGGGGGTCTGGAACTCCCACACCTCCGTGGGCAA...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGACAGGCCCCAGCATGTaGACACCCAGTAGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTTGPSM*TPSSQR
Trigger: TCGCTGGCTACTGGGTGTCCACATGCTGGGGCCTGT...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCGTGGTTCGGGTGGATaGAGCCCTTCCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSRGSGG*SPSHLR
Trigger: TCTCAGATGGGAAGGGCTCCATCCACCCGAACCACG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGCAGCATGGCGATGGTaGCCTCAAGCCCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTAAWRW*PQAPSC
Trigger: GCAAGATGGGGCTTGAGGCCACCATCGCCATGCTGC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCAGCATGGCGATGGTaGCCTCAAGCCCCATCTTGC +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAAWRW*PQAPSC
Trigger: GCAAGATGGGGCTTGAGGCCACCATCGCCATGCTGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCAGCAGCATGGCGATaGTGGCCTCAAGCCCCATCT +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAAAWR*WPQAPS
Trigger: AGATGGGGCTTGAGGCCACCATCGCCATGCTGCTGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGGGTCTTCGGTTCTCTaGCTTGGCTCAGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSGSSVL*LGSGSS
Trigger: ACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGTGTGGTGTGTGTTGTaGAGCGAAGCCGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSVWCVL*SEAGCW
Trigger: CCAGCAACCGGCTTCGCTCCACAACACACACCACAC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGGGTGGAGGAGCACCTaGCGTCGTTCGGATGTTCAA +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTGWRST*RRSDVQ
Trigger: TTGAACATCCGAACGACGTCAGGTGCTCCTCCACCC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGGTGGAGGAGCACCTaGCGTCGTTCGGATGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAGWRST*RRSDVQ
Trigger: TTGAACATCCGAACGACGTCAGGTGCTCCTCCACCC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCCGTCCCCGGGGAGAATaGCGACGTGGTTCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVRPRGE*RRGSGG
Trigger: TCCACCCGAACCACGTCGTCATTCTCCCCGGGGACG...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCCTTTCAGACTTTTATaGGTCCCCAGGTCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAPFRLL*VPRSAE
Trigger: CTCCGCCGACCTGGGGACTCATAAAAGTCTGAAAGG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTTTGGTCCCCCGTAGCTaGCCCTGGGCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGLVPRS*PWAAQL
Trigger: GAGCTGAGCTGCCCAGGGTCAGCTACGGGGGACCAA...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCGCAGGGCCCTTTGTCTaGACTGTCCTTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASAGPFV*TVLERQ
Trigger: CTGCCTTTCAAGGACAGTTCAGACAAAGGGCCCTGC...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCACATACAGGTTCTCTaGAGCCACAGCCAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVHIQVL*SHSQRS
Trigger: ACTGCGCTGGCTGTGGCTTCAGAGAACCTGTATGTG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLGCRPS*CCVALA
Trigger: AGCCAGCGCCACACAACATCAAGAAGGCCGACAACC...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCGGAAAGAAGGTGTCCTaGTGGGTCTTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAGKKVS*WVLSPS
Trigger: GGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCC...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTATGACCCCAAGATGTTaGCCACGGAGGTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSMTPRC*PRRCGS
Trigger: ACTCCCACACCTCCGTGGGCAACATCTTGGGGTCAT...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAATGACCCCAAGATGTTaGCCACGGAGGTGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAMTPRC*PRRCGS
Trigger: ACTCCCACACCTCCGTGGGCAACATCTTGGGGTCAT...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCCGAAACATCATGGGTaGTGGAAAAGCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARAPKHHG*WKSLWG
Trigger: GCCCCAGAGGCTTTTCCAGCACCCATGATGTTTCGG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTACAGGCTGGAAAGCGTaGAAAGAAGGTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETATGWKA*KEGVLL
Trigger: CAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGT...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCCGCTCCCACAGGCTaGAAAGCGTGGAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAAPTG*KAWKEG
Trigger: ACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGACGACGTGGTTCGGGTaGATGGAGCCCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLTTWFG*MEPFPS
Trigger: AGATGGGAAGGGCTCCATCCACCCGAACCACGTCGT...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGACGACGTGGTTCGGGTaGATGGAGCCCTTCCCATCT +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPTTWFG*MEPFPS
Trigger: AGATGGGAAGGGCTCCATCCACCCGAACCACGTCGT...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTGTCACGCGTGCATTTaGGTGGCTGCATGGGCACAC +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTCHACI*VAAWAH
Trigger: GTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCCGGCACTGTCTGGTaGGCTCTGGTGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAAGTVW*ALVSCF
Trigger: AAAACAGGACACCAGAGCCCACCAGACAGTGCCGGC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGGATGTTGTGTGGCGCTaGCTCTCTGCTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRDVVWR*LSASLL
Trigger: CAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATC...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGTGGTGTGTGTTGTaGAGCGAAGCCGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAVWCVL*SEAGCW
Trigger: CCAGCAACCGGCTTCGCTCCACAACACACACCACAC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCCTTCCTTCTGGCAGTaGCTCTGCTCTAGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRPSFWQ*LCSSRR
Trigger: TCGCCTACTAGAGCAGAGCCACTGCCAGAAGGAAGG...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCTTTCTCCAGTCGGTCTaGGATCACACCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAFLQSV*DHTCQD
Trigger: ATCCTGGCAGGTGTGATCTCAGACCGACTGGAGAAA...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCAAGCCCCATCTTGCTaGCGGTGGAGAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAQAPSC*RWRRCR
Trigger: TCTACATCTTCTCCACCGTCAGCAAGATGGGGCTTG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTTGTGGCTGGAATGCCTaGGAGGGTCGGGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGCGWNA*EGRGYL
Trigger: CAGGTAGCCCCGACCCTCTCAGGCATTCCAGCCACA...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCGTTCTTATCAAACGGTaGCCAGCCACAGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAVLIKR*PATVGL
Trigger: GAGACCGACTGTGGCTGGGCACCGTTTGATAAGAAC...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTTTTCCAGGTGCGTGTaGAAAAGGCAAAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAFSRCV*KRQREV
Trigger: GACCTCCCTTTGCCTTTTGCACACGCACCTGGAAAA...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGCCTCCAACCGGAGGTaGTTCCTGCCTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGASNRR*FLPPHP
Trigger: AGGGTGAGGAGGCAGGAAGCACCTCCGGTTGGAGGC...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGGTGGGCCGTAAGGGCTaGAAGGCTGGTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLVGRKG*KAGGQR
Trigger: CCGCTGGCCACCAGCCTTCCAGCCCTTACGGCCCAC...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCACAGGCTGGAAAGCGTaGAAAGAAGGTGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARATGWKA*KEGVLL
Trigger: CAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGT...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCAGGCACTGCATCTCTaGGTCCAGAGGCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASQALHL*VQRLVL
Trigger: AAGAACAAGCCTCTGGACCCAGAGATGCAGTGCCTG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCGCTCCCCCGCCTTTTTaGCATCAAGGTGATCCACAT +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAAPPPF*HQGDPH
Trigger: ATGTGGATCACCTTGATGCCAAAAAGGCGGGGGAGC...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGATGTTGTGTGGCGCTaGCTCTCTGCTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTDVVWR*LSASLL
Trigger: CAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCCTTCTTGATGTTGTGTaGCGCTGGCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPLLDVV*RWLSAS
Trigger: AGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCAAACATCATGGGTGCTaGAAAAGCCTCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGKHHGC*KSLWGD
Trigger: ATCGCCCCAGAGGCTTTTCCAGCACCCATGATGTTT...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCAGTCCGAAACATCATaGGTGCTGGAAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGQSETS*VLEKPL
Trigger: CAGAGGCTTTTCCAGCACCCATGATGTTTCGGACTG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTAGTACAGAGGAACCGTaGCCACTGTTGCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSASTEEP*PLLPST
Trigger: AGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACT...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS-3UTR TCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCTGATCCCTGGAGAATaGGATGATGAAGCGAATGCC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCALIPGE*DDEANA
Trigger: GGCATTCGCTTCATCATCTCATTCTCCAGGGATCAG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCAAGCCCCATCTTGCTaGCGGTGGAGAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLQAPSC*RWRRCR
Trigger: TCTACATCTTCTCCACCGTCAGCAAGATGGGGCTTG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTTGGTCCCCCGTAGCTaGCCCTGGGCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLLVPRS*PWAAQL
Trigger: GAGCTGAGCTGCCCAGGGTCAGCTACGGGGGACCAA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGTTCTTATCAAACGGTaGCCAGCCACAGTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLVLIKR*PATVGL
Trigger: GAGACCGACTGTGGCTGGGCACCGTTTGATAAGAAC...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCCACTATCCCCATGGCTaGCACGATGGCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVHYPHG*HDGSRH
Trigger: GTGCCTGGAGCCATCGTGGCAGCCATGGGGATAGTG...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCATGTAAAACACATTaGTCCAGCCGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAACKTH*SSRTGR
Trigger: TCTCCCCGTCCGGCTGGAGCAATGTGTTTTACATGC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGCATGTAAAACACATTaGTCCAGCCGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTACKTH*SSRTGR
Trigger: TCTCCCCGTCCGGCTGGAGCAATGTGTTTTACATGC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCAGGTCACTCTTTCCATaGAGGGCCCTTTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASRSLFP*RALCLN
Trigger: GTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCT...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCGGCTCTCTGCTTCTCTaGTGGCCGGCACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVGSLLL*WPALSG
Trigger: ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCC...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTACCGGAGGTGCTTCCTaGCTCCTCACCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGTGGAS*LLTLGF
Trigger: GAAGCCAAGGGTGAGGAGGCAGGAAGCACCTCCGGT...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCGCTGTCACTCGCATTaGCCAGGAGGCCCACGGGCT +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLRCHSH*PGGPRA
Trigger: AGCCCGTGGGCCTCCTGGCCAATGCGAGTGACAGCG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCGCAGTGCAGTACTTGTaGAGCTCACCCTTAACTATG +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGAVQYL*SSPLTM
Trigger: CATAGTTAAGGGTGAGCTCCACAAGTACTGCACTGC...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTCCATGGCTGCCACGATaGCTCCAGGCACGACGAAGG +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSPWLPR*LQARRR
Trigger: CCTTCGTCGTGCCTGGAGCCATCGTGGCAGCCATGG...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGGGAGAATGACGACGTaGTTCGGGTGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGGRMTT*FGWMEP
Trigger: GGGCTCCATCCACCCGAACCACGTCGTCATTCTCCC...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGCTCCCCCGCCTTTTTaGCATCAAGGTGATCCACAT +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPAPPPF*HQGDPH
Trigger: ATGTGGATCACCTTGATGCCAAAAAGGCGGGGGAGC...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTCCTTAAATGGAACTTaGTCCCCCGTAGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRSLNGT*SPVADP
Trigger: AGGGTCAGCTACGGGGGACCAAGTTCCATTTAAGGA...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTCACTGTTCCTTAAATaGAACTTGGTCCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPSLFLK*NLVPRS
Trigger: GCTACGGGGGACCAAGTTCCATTTAAGGAACAGTGA...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCTGATCCCTGGAGAATaGGATGATGAAGCGAATGCC +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPLIPGE*DDEANA
Trigger: GGCATTCGCTTCATCATCTCATTCTCCAGGGATCAG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGAAGGCTCTGTACCACTaGTCCCTGGAGAATGAGATG +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTKALYH*SLENEM
Trigger: CATCTCATTCTCCAGGGATCAGTGGTACAGAGCCTT...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAAAGCCGAACAGGGCGGTaGAGGCTCCGCTGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSESRTGR*RLRWRA
Trigger: TGCTCGCCAGCGGAGCCTTCACCGCCCTGTTCGGCT...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCGTTCGGATGTTCAATaGGGAAGAGAAAGCACACTA +
Preference number: 4 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGRSDVQ*GRESTL
Trigger: TAGTGTGCTTTCTCTTCCTCATTGAACATCCGAACG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCAGCCCGTCCCGTCAATaGTGGCCGTCACGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRSPSRQ*WPSRWR
Trigger: TCTCCACCGTGACGGCCATCATTGACGGGACGGGCT...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGAGTACTCGCTCACTTTaGTGTTCTGTGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVSTRSL*CSVAGM
Trigger: CATTCCAGCCACAGAACATCAAAGTGAGCGAGTACT...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGGTTGTCGGCCTTCTTaGTGTTGTGTGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGGCRPS*CCVALA
Trigger: AGCCAGCGCCACACAACATCAAGAAGGCCGACAACC...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGCTTCATCCCAAGCAGTaGAGTACTTGTGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLLHPKQ*STCGAH
Trigger: GTGAGCTCCACAAGTACTGCACTGCTTGGGATGAAG...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTACGGTGGAGAGGGCGTaGGCGTTGCCTTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGTVERA*ALPFRL
Trigger: AAGTCTGAAAGGCAACGCGCACGCCCTCTCCACCGT...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCACGGTGGAGAGGGCGTaGGCGTTGCCTTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVTVERA*ALPFRL
Trigger: AAGTCTGAAAGGCAACGCGCACGCCCTCTCCACCGT...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTTTTCCAGGTGCGTGTaGAAAAGGCAAAGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLFSRCV*KRQREV
Trigger: GACCTCCCTTTGCCTTTTGCACACGCACCTGGAAAA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCGCTGGCAAGCCTGGGTaGCTCCAACCGGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRAGKPG*LQPEVL
Trigger: AAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGC...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTGGGAGAATGACGACGTaGTTCGGGTGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSGRMTT*FGWMEP
Trigger: GGGCTCCATCCACCCGAACCACGTCGTCATTCTCCC...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGAACTCTATCACGCCTaGAATTTTCAAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSELYHA*NFQGPC
Trigger: ACAGGGGCCTTGAAAATTCCAGGCGTGATAGAGTTC...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTAGAAGATGTAGAGCGTaGGGGCCGCGAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSRRCRA*GPRAAA
Trigger: TGCTGCTGCTCGCGGCCCCCACGCTCTACATCTTCT...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCTCACTGTTCCTTAAATaGAACTTGGTCCCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCASLFLK*NLVPRS
Trigger: GCTACGGGGGACCAAGTTCCATTTAAGGAACAGTGA...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCACTTTGATGTTCTGTaGCTGGAATGCCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPHFDVL*LECLRG
Trigger: CCCTCTCAGGCATTCCAGCCACAGAACATCAAAGTG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGCTGGAAAAGCCTCTaGGGCGATGTGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVCWKSL*GDVVGL
Trigger: CAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCA...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCAGTCCGAAACATCATaGGTGCTGGAAAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAQSETS*VLEKPL
Trigger: CAGAGGCTTTTCCAGCACCCATGATGTTTCGGACTG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCGGTGATCCACATTCGTaGTGTACAGGGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVGDPHS*CTGAAR
Trigger: TCTGGCTGCCCCTGTACATCACGAATGTGGATCACC...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGTCTGAACTGTCCTTaGAAGGCAGTTGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLCLNCP*KAVVKG
Trigger: ACCCTTCACAACTGCCTTTCAAGGACAGTTCAGACA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTGGAAAGAAGGTGTCCTaGTGGGTCTTGTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGGKKVS*WVLSPS
Trigger: GGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCC...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAGGCCAGCCGGTGGTCTaGACCAGCCCGTTGATGACC +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATGQPVV*TSPLMT
Trigger: GGTCATCAACGGGCTGGTGCAGACCACCGGCTGGCC...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCGCTTCCCAAACCTCTaGTGTGCCCCTGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLRFPNL*CAPVPE
Trigger: CTCAGGCACAGGGGCACAGCAGAGGTTTGGGAAGCG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAACTCCTGCCGGCTCTCTaGACCCTCAGCTGTCACCGC +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSELLPAL*TLSCHR
Trigger: GCGGTGACAGCTGAGGGTCCAGAGAGCCGGCAGGAG...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CCA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGCAGTGCAGTACTTGTaGAGCTCACCCTTAACTATG +
Preference number: 4 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTAVQYL*SSPLTM
Trigger: CATAGTTAAGGGTGAGCTCCACAAGTACTGCACTGC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCACGCGTGCATTTGGGTaGCTGCATGGGCACACGCCT +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRTRAFG*LHGHTP
Trigger: AGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGT...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAGGCTTTCGAGATAAGTaGAAACTTGCATACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAGFRDK*KLAYSR
Trigger: TCTGCTGTATGCAAGTTTTCACTTATCTCGAAAGCC...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTCCGAAACATCATGGGTaGTGGAAAAGCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSPKHHG*WKSLWG
Trigger: GCCCCAGAGGCTTTTCCAGCACCCATGATGTTTCGG...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTAAGAAGGTGTCCTGCTaGGTCTTGTCCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGKKVSC*VLSPSF
Trigger: GAAGGAAGGGGACAAGACCCAGCAGGACACCTTCTT...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAACCATGGCTGCCACGATaGCTCCAGGCACGACGAAGG +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEPWLPR*LQARRR
Trigger: CCTTCGTCGTGCCTGGAGCCATCGTGGCAGCCATGG...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCAGCACACTATCCCCATaGCTGCCACGATGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRSTLSP*LPRWLQ
Trigger: CTGGAGCCATCGTGGCAGCCATGGGGATAGTGTGCT...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCGGGTCTTCGGTTCTCTaGCTTGGCTCAGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRGSSVL*LGSGSS
Trigger: ACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCC...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTGTCACGCGTGCATTTaGGTGGCTGCATGGGCACAC +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLCHACI*VAAWAH
Trigger: GTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 72 bp TCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTaGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: SWFPTWLSAFLM*CGAGSLLLCWP
Trigger: CGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 72 bp GCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTaGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: APSWFPTWLSAF*MLCGAGSLLLC
Trigger: GCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTAAGATGCTTCATAAATaGGTCATTAATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGPANPSAGGETASQTSKMLHK*VINPGS
Trigger: GGAGCCAGGATTAATGACTCATTTATGAAGCATCTT...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCAAGATGCTTCATAAATaGGTCATTAATCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FGALCGWQAWVPPTGGASKMLHK*VINPGS
Trigger: GGAGCCAGGATTAATGACTCATTTATGAAGCATCTT...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGGCTTTCGAGATAAGTaGAAACTTGCATACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGPANPSAGGETASQTSAGFRDK*KLAYSR
Trigger: TCTGCTGTATGCAAGTTTTCACTTATCTCGAAAGCC...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGGGTGATCCACATTCGTaGTGTACAGGGGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLGDPHS*CTGAAR
Trigger: TCTGGCTGCCCCTGTACATCACGAATGTGGATCACC...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCCCTTTCAGACTTTTATaGGTCCCCAGGTCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRPFRLL*VPRSAE
Trigger: CTCCGCCGACCTGGGGACTCATAAAAGTCTGAAAGG...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAACTTGAAAGGCAGTTGTaGAGGGTGGGCCCAGACCCC +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSELERQL*RVGPDP
Trigger: GGGGTCTGGGCCCACCCTTCACAACTGCCTTTCAAG...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGGCAGGGCCCTTTGTCTaGACTGTCCTTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLAGPFV*TVLERQ
Trigger: CTGCCTTTCAAGGACAGTTCAGACAAAGGGCCCTGC...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACACTGTGCCCCTGTGCCTaGGCTGAACAGCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATLCPCA*AEQQCH
Trigger: ATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAG...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTAGGTCACTCTTTCCATaGAGGGCCCTTTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGRSLFP*RALCLN
Trigger: GTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCT...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCCTTGTTGTCACGCGTaGATTTGGGTGGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLPCCHA*IWVAAW
Trigger: CCATGCAGCCACCCAAATGCACGCGTGACAACAAGG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTCCAGACTTCCTGTTCTaGCTGCTGAACCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSPDFLF*LLNLTS
Trigger: TGACGTCAGGTTCAGCAGCCAGAACAGGAAGTCTGG...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTTCGGTTCTCTGGCTTaGCTCAGGCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLFGSLA*LRQQFL
Trigger: CAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTTCGGTTCTCTGGCTTaGCTCAGGCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRFGSLA*LRQQFL
Trigger: CAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAA...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAATTTGGGTGGCTGCATaGGCACACGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATIWVAA*AHACEA
Trigger: GGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAAT...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAAATTTGGGTGGCTGCATaGGCACACGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEIWVAA*AHACEA
Trigger: GGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAAT...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCCACTTTGATGTTCTGTaGCTGGAATGCCTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVHFDVL*LECLRG
Trigger: CCCTCTCAGGCATTCCAGCCACAGAACATCAAAGTG...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCCTTCTTGATGTTGTGTaGCGCTGGCTCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVLLDVV*RWLSAS
Trigger: AGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAAGGAAGGCCAGGGGCTaGGATGACGGTGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATRKARG*DDGDFG
Trigger: CCCAAAGTCACCGTCATCCCAGCCCCTGGCCTTCCT...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTTTCTCCAGTCGGTCTaGGATCACACCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLFLQSV*DHTCQD
Trigger: ATCCTGGCAGGTGTGATCTCAGACCGACTGGAGAAA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTCAGCTCCTTGTGTATaGGGCGGATCAGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSSAPCV*GGSGTV
Trigger: TACTGTTCCTGATCCGCCTCATACACAAGGAGCTGA...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTAGTACTCGCTCACTTTaGTGTTCTGTGGCTGGAATG +
Preference number: 4 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGSTRSL*CSVAGM
Trigger: CATTCCAGCCACAGAACATCAAAGTGAGCGAGTACT...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAAGCGATGTGGTGGGTCTaGGCTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEAMWWV*APSWFP
Trigger: TGGAAACCAAGACGGAGCTCAGACCCACCACATCGC...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGGTCGCAGAATAAGATaGTTCATAAATGAGTCATTA +
Preference number: 4 (lower is better)
Translates to: KPVAGLGPANPSAGGETAGRRIR*FINESL
Trigger: TAATGACTCATTTATGAAGCATCTTATTCTGCGACC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCCAGACTTCCTGTTCTaGCTGCTGAACCTGACGTCA +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLPDFLF*LLNLTS
Trigger: TGACGTCAGGTTCAGCAGCCAGAACAGGAAGTCTGG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCGAACTCTATCACGCCTaGAATTTTCAAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVELYHA*NFQGPC
Trigger: ACAGGGGCCTTGAAAATTCCAGGCGTGATAGAGTTC...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGAAGGCTCTGTACCACTaGTCCCTGGAGAATGAGATG +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLKALYH*SLENEM
Trigger: CATCTCATTCTCCAGGGATCAGTGGTACAGAGCCTT...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACAGTAGCCAGCGATCAATaGCCCCAAGATGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATVASDQ*PQDVAH
Trigger: GTGGGCAACATCTTGGGGTCATTGATCGCTGGCTAC...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTCAGCTCCTTGTGTATaGGGCGGATCAGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLSAPCV*GGSGTV
Trigger: TACTGTTCCTGATCCGCCTCATACACAAGGAGCTGA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGTCTGAACTGTCCTTaGAAGGCAGTTGTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSCLNCP*KAVVKG
Trigger: ACCCTTCACAACTGCCTTTCAAGGACAGTTCAGACA...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCGGTCGCAGAATAAGATaGTTCATAAATGAGTCATTA +
Preference number: 4 (lower is better)
Translates to: CHACIWVAAWAHACEARAGRRIR*FINESL
Trigger: TAATGACTCATTTATGAAGCATCTTATTCTGCGACC...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCAGAGGGCGTGCGCGTTaGCTTTCAGACTTTTATGAG +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRRGRAR*LSDFYE
Trigger: CTCATAAAAGTCTGAAAGGCAACGCGCACGCCCTCT...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCATTCAAGATTTGCTTCTaGAGTCTCAATCTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAFKICF*SLNLFV
Trigger: TACAAACAGATTGAGACTCCAGAAGCAAATCTTGAA...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTCCTTAAATGGAACTTaGTCCCCCGTAGCTGACCCT +
Preference number: 4 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLSLNGT*SPVADP
Trigger: AGGGTCAGCTACGGGGGACCAAGTTCCATTTAAGGA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCAAACATCATGGGTGCTaGAAAAGCCTCTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRKHHGC*KSLWGD
Trigger: ATCGCCCCAGAGGCTTTTCCAGCACCCATGATGTTT...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
3UTR CAA 72 bp AGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAAGGCAGTTGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RQREVTLSMQGP*SELSLKGSCEG
Trigger: CCCTTCACAACTGCCTTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR TCA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTCGTTCGGATGTTCAATaGGGAAGAGAAAGCACACTA +
Preference number: 4 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSRSDVQ*GRESTL
Trigger: TAGTGTGCTTTCTCTTCCTCATTGAACATCCGAACG...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACACAGGCACTGCATCTCTaGGTCCAGAGGCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATQALHL*VQRLVL
Trigger: AAGAACAAGCCTCTGGACCCAGAGATGCAGTGCCTG...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGGCCAGCCGGTGGTCTaGACCAGCCCGTTGATGACC +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCGQPVV*TSPLMT
Trigger: GGTCATCAACGGGCTGGTGCAGACCACCGGCTGGCC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTCTGGCCGGCACTGTCTaGTGGGCTCTGGTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCLAGTV*WALVSC
Trigger: ACAGGACACCAGAGCCCACCAGACAGTGCCGGCCAG...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTAGGAAGGCCAGGGGCTaGGATGACGGTGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCRKARG*DDGDFG
Trigger: CCCAAAGTCACCGTCATCCCAGCCCCTGGCCTTCCT...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGTTCTGTGGCTGGAATaGCTGAGAGGGTCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCVLWLE*LRGSGL
Trigger: TAGCCCCGACCCTCTCAGGCATTCCAGCCACAGAAC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTCGTGGTTCGGGTGGATaGAGCCCTTCCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCRGSGG*SPSHLR
Trigger: TCTCAGATGGGAAGGGCTCCATCCACCCGAACCACG...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTTGCTGGAAAAGCCTCTaGGGCGATGTGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCCWKSL*GDVVGL
Trigger: CAGACCCACCACATCGCCCCAGAGGCTTTTCCAGCA...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CCA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAATTCAAGATTTGCTTCTaGAGTCTCAATCTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEFKICF*SLNLFV
Trigger: TACAAACAGATTGAGACTCCAGAAGCAAATCTTGAA...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR GCA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTAGAGGGCGTGCGCGTTaGCTTTCAGACTTTTATGAG +
Preference number: 4 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCRGRAR*LSDFYE
Trigger: CTCATAAAAGTCTGAAAGGCAACGCGCACGCCCTCT...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp ACGCCCACGTCCCCATCGCGGCAGACAATGCGCAGGGTCCCCTCCTaGCGGCTCTCTGGACCCTCAGCTGTCACCGCGGCCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: TPTSPSRQTMRRVPS*RLSGPSAVTAARAG
Trigger: CCCGGCCCGGGCCGCGGTGACAGCTGAGGGTCCAGAGAGCCGGCAGGAGGGGACCCTGCGCATTGTCTGCCGCGATGGGGACGTGGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS CCA 90 bp CGGCGCTCCGAGCCAGCGTTCTGTGCCGGCTCCTCCCTGGGCGGCTaGTCCCCGGAGGAGGTGAATTCCGCGGGCACGCCCACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RRSEPAFCAGSSLGG*SPEEVNSAGTPTSP
Trigger: TGGGGACGTGGGCGTGCCCGCGGAATTCACCTCCTCCGGGGACCAGCCGCCCAGGGAGGAGCCGGCACAGAACGCTGGCTCGGAGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS GCA 90 bp CCCGTGCCCGCTCCCTCTGCCTCCACTTCCCCGGAATCCCAGCGTTaGCCCGGTCCGGGAACGCCCGGCATTGTCGCCGAGGGCCACTCT +
Preference number: 5 (lower is better)
Translates to: PVPAPSASTSPESQR*PGPGTPGIVAEGHS
Trigger: AGAGTGGCCCTCGGCGACAATGCCGGGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGGGGAAGTGGAGGCAGAGGGAGCGGGCACGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS TCA 90 bp CGTTCTGTGCCGGCTCCTCCCTGGGCGGCTGGTCCCCGGAGGAGGTaGATTCCGCGGGCACGCCCACGTCCCCATCGCGGCAGACAATGC +
Preference number: 5 (lower is better)
Translates to: RSVPAPPWAAGPRRR*IPRARPRPHRGRQC
Trigger: GCATTGTCTGCCGCGATGGGGACGTGGGCGTGCCCGCGGAATTCACCTCCTCCGGGGACCAGCCGCCCAGGGAGGAGCCGGCACAGAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS GCA 90 bp CCGGGAACCAGCTGCTCAGCCGACAAACAACGCAAAGGCCCAGGGTaGCGGCGCTCCGAGCCAGCGTTCTGTGCCGGCTCCTCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PGTSCSADKQRKGPG*RRSEPAFCAGSSLG
Trigger: GCCCAGGGAGGAGCCGGCACAGAACGCTGGCTCGGAGCGCCGGCACCCTGGGCCTTTGCGTTGTTTGTCGGCTGAGCAGCTGGTTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCGTGGAGCGAAGCCGGTaGCTGGGCTTGGACCCGCCA +
Preference number: 5 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGVERSR*LGLDPP
Trigger: TGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCAC...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 90 bp ATGGCGGCCGTGCCACTCCCACCGTCCCCGGGGAGAATGACGACGTaGTTCGGGTGGATGGAGCCCTTCCCATCTGAGAGCAGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: MAAVPLPPSPGRMTT*FGWMEPFPSESSRH
Trigger: GTGCCTGCTGCTCTCAGATGGGAAGGGCTCCATCCACCCGAACCACGTCGTCATTCTCCCCGGGGACGGTGGGAGTGGCACGGCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTCGCTGTCACTCGCATaGGCCAGGAGGCCCACGGGC +
Preference number: 5 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTSLSLA*ARRPTG
Trigger: GCCCGTGGGCCTCCTGGCCAATGCGAGTGACAGCGA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS TCA 90 bp CAGGGTGCGCAGCGGCGGGGGAACCTCGAGGTTGGGTTTGGAGAGTaGGGAGGCGCAGAAACCAGAGGTCTGAGCCACAGCTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QGAQRRGNLEVGFGE*GGAETRGLSHSSPG
Trigger: TCCTGGGGAGCTGTGGCTCAGACCTCTGGTTTCTGCGCCTCCTCACTCTCCAAACCCAACCTCGAGGTTCCCCCGCCGCTGCGCACCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 90 bp GGCTTCCCAGGGTGCGCAGCGGCGGGGGAACCTCGAGGTTGGGTTTaGAGAGTGAGGAGGCGCAGAAACCAGAGGTCTGAGCCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GFPGCAAAGEPRGWV*RVRRRRNQRSEPQL
Trigger: GAGCTGTGGCTCAGACCTCTGGTTTCTGCGCCTCCTCACTCTCCAAACCCAACCTCGAGGTTCCCCCGCCGCTGCGCACCCTGGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS CCA 90 bp GGGCCTACGCTGGCTGAGCTGGGCAGGGGTACAGAAGAGAAGGAATaGCGTGCTGGGCAGACCTCTCGGCCACCTGAGACGTGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GPTLAELGRGTEEKE*RAGQTSRPPETCSH
Trigger: GTGGCTGCACGTCTCAGGTGGCCGAGAGGTCTGCCCAGCACGCCATTCCTTCTCTTCTGTACCCCTGCCCAGCTCAGCCAGCGTAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS-3UTR CAA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCCACAGTCGGTCTCATaGTCAGGGAGCTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: CHACIWVAAWAHACEARAPQSVS*SGSWWG
Trigger: CCCCCACCAGCTCCCTGACAATGAGACCGACTGTGG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCACCCTCCCGGCCTTGTaGTCACGCGTGCATTTGGGT +
Preference number: 5 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGTLPAL*SRVHLG
Trigger: ACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGT...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCCCCACCCTCCCGGCCTaGTTGTCACGCGTGCATTTG +
Preference number: 5 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAPTLPA*LSRVHL
Trigger: CAAATGCACGCGTGACAACAAGGCCGGGAGGGTGGG...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGAGCCGGTTGCTGGGCTaGGACCCGCCAATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTSRLLG*DPPIPV
Trigger: CACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCT...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp AGGGCTGGCCTTAGCCAGGTGGGAAAGTGGCCAGTGGTGACTGGCTaGGGGTGGAGGCAGCTAGGGCAGGGCTCATTCATGGCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: RAGLSQVGKWPVVTG*GWRQLGQGSFMAAN
Trigger: GTTGGCTGCCATGAATGAGCCCTGCCCTAGCTGCCTCCACCCGCAGCCAGTCACCACTGGCCACTTTCCCACCTGGCTAAGGCCAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS CCA 90 bp GGCCTTAGCCAGGTGGGAAAGTGGCCAGTGGTGACTGGCTGCGGGTaGAGGCAGCTAGGGCAGGGCTCATTCATGGCAGCCAACGTGGTC +
Preference number: 5 (lower is better)
Translates to: GLSQVGKWPVVTGCG*RQLGQGSFMAANVV
Trigger: GACCACGTTGGCTGCCATGAATGAGCCCTGCCCTAGCTGCCTCCACCCGCAGCCAGTCACCACTGGCCACTTTCCCACCTGGCTAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCTCCGCGAAAATAGCTaGAGACCGTCCCCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: FGALCGWQAWVPPTGGASLRENS*RPSPAL
Trigger: GAGAGCCGGGGACGGTCTCAAGCTATTTTCGCGGAG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CAA 90 bp CCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCGCCTCAAGCCCCATCTaGCTGACGGTGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: PPIPVPVGRPLPKPLLCPASSPI*LTVEKM
Trigger: CATCTTCTCCACCGTCAGCAAGATGGGGCTTGAGGC...GGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCGGGCAGCTCAGCTCCTaGTGTATGAGGCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: FGALCGWQAWVPPTGGASGQLSS*CMRRIR
Trigger: CCTGATCCGCCTCATACACAAGGAGCTGAGCTGCCC...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAGGGCAGCTCAGCTCCTaGTGTATGAGGCGGATCAGG +
Preference number: 5 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAGQLSS*CMRRIR
Trigger: CCTGATCCGCCTCATACACAAGGAGCTGAGCTGCCC...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 90 bp AGATGTAGAGCGTGGGGGCCGCGAGCAGCAGCATCAGGCCGCAGGTaGAGGCCCTTTTCTCCAGTCGGTCTGAGATCACACCTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RCRAWGPRAAASGRR*RPFSPVGLRSHLPG
Trigger: TCCTGGCAGGTGTGATCTCAGACCGACTGGAGAAAAGGGCCTCCACCTGCGGCCTGATGCTGCTGCTCGCGGCCCCCACGCTCTACATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 90 bp AGAAAGGGCTTCCCAGGGTGCGCAGCGGCGGGGGAACCTCGAGGTTaGGTTTGGAGAGTGAGGAGGCGCAGAAACCAGAGGTCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RKGFPGCAAAGEPRG*VWRVRRRRNQRSEP
Trigger: TGGCTCAGACCTCTGGTTTCTGCGCCTCCTCACTCTCCAAACCCAACCTCGAGGTTCCCCCGCCGCTGCGCACCCTGGGAAGCCCTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCCCTTTTCCAAACCAGTaGCCGAGGCAGGTGACGACG +
Preference number: 5 (lower is better)
Translates to: FGALCGWQAWVPPTGGASPFPNQ*PRQVTT
Trigger: CGTCGTCACCTGCCTCGGCAACTGGTTTGGAAAAGG...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCAAATGACCCCAAGATGTaGCCCACGGAGGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPANDPKM*PTEVWE
Trigger: CTCCCACACCTCCGTGGGCAACATCTTGGGGTCATT...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGAATGACCCCAAGATGTaGCCCACGGAGGTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRNDPKM*PTEVWE
Trigger: CTCCCACACCTCCGTGGGCAACATCTTGGGGTCATT...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGCCTGTGAGGCCAGGGCCCTTCGGTTCTCTGGCTaGGCTCAGGCAGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: CHACIWVAAWAHACEARALRFSG*AQAAVP
Trigger: AGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAG...GGCCCTGGCCTCACAGGCGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp AAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTGGTCTGAGCTCCGTCTaGGTTTCCAACCTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: KPVAGLGPANPSAGGETAGLSSV*VSNLVV
Trigger: GACAACCAGGTTGGAAACCAAGACGGAGCTCAGACC...AGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGCAGGTGTGGTGTGTGTaGTGGAGCGAAGCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPQVWCV*WSEAGC
Trigger: GCAACCGGCTTCGCTCCACAACACACACCACACCTG...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCCATTCTCATAGCCTTTaGAGTGCGTCACCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGHSHSL*SASPGW
Trigger: CCACCCTGGTGACGCACTCAAAAGGCTATGAGAATG...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTCTTCGGTTCTCTGGCTaGGCTCAGGCAGCAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LGPANPSAGGETASQTSALRFSG*AQAAVP
Trigger: AGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAG...AGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTTGTCACGCGTGCATTaGGGTGGCTGCATGGGCACA +
Preference number: 5 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTLSRVH*GGCMGT
Trigger: TGTGCCCATGCAGCCACCCAAATGCACGCGTGACAA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTCGGCCTTCTTGATGTaGTGTGGCGCTGGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLSAFLM*CGAGSL
Trigger: CAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGGTTGTCGGCCTTCTaGATGTTGTGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LDPPIPVPVGRPLPKPLLWLSAF*MLCGAG
Trigger: GCCAGCGCCACACAACATCAAGAAGGCCGACAACCA...CAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 90 bp CAGCAGCATCAGGCCGCAGGTGGAGGCCCTTTTCTCCAGTCGGTCTaGGATCACACCTGCCAGGATCCCACCAAAGATTCCGCCCACGTC +
Preference number: 5 (lower is better)
Translates to: QQHQAAGGGPFLQSV*DHTCQDPTKDSAHV
Trigger: GACGTGGGCGGAATCTTTGGTGGGATCCTGGCAGGTGTGATCTCAGACCGACTGGAGAAAAGGGCCTCCACCTGCGGCCTGATGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 90 bp CTGGCTCCAGATCCTCTCTCTGTTGCCCCTGCCGCTCCCACAGGCTaGAAAGCGTGGAAAGAAGGTGTCCTGCTGGGTCTTGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LAPDPLSVAPAAPTG*KAWKEGVLLGLVPF
Trigger: GAAGGGGACAAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATCTGGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCGGGAACGCCCGGCATaGTCGCCGAGGGCCACTCTT +
Preference number: 5 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLRERPA*SPRATL
Trigger: AAGAGTGGCCCTCGGCGACAATGCCGGGCGTTCCCG...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CAA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAACCCGGAATCCCAGCGTaGCCCCGGTCCGGGAACGCC +
Preference number: 5 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEPGIPA*PRSGNA
Trigger: GGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGGG...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS-3UTR CAA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGGGTCTGAGCTCCGTCTaGGTTTCCAACCTGGTTGTC +
Preference number: 5 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTGLSSV*VSNLVV
Trigger: GACAACCAGGTTGGAAACCAAGACGGAGCTCAGACC...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCCTGCCTCCTCACCCTaGGCTTCTCGACAATTAGTT +
Preference number: 5 (lower is better)
Translates to: GLGPANPSAGGETASQTSPASSP*ASRQLV
Trigger: AACTAATTGTCGAGAAGCCAAGGGTGAGGAGGCAGG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GTGACTTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCCTGCCTCCTCACCCTaGGCTTCTCGACAATTAGTT +
Preference number: 5 (lower is better)
Translates to: VTLGRSVAGKPGCLQPEVPASSP*ASRQLV
Trigger: AACTAATTGTCGAGAAGCCAAGGGTGAGGAGGCAGG...CACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTGGGATGACGGTGACTTaGGGGCGCTCTGTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSGMTVT*GRSVAG
Trigger: GCCAGCCACAGAGCGCCCCAAAGTCACCGTCATCCC...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCGTCCCACACTCTGTTTaGGTGAGAGTGGGGATAGGT +
Preference number: 5 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAVPHSV*VRVGIG
Trigger: ACCTATCCCCACTCTCACCAAAACAGAGTGTGGGAC...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS TCA 90 bp GGGCAGACCTCTCGGCCACCTGAGACGTGCAGCCACCAACTTAAGTaGTGGCAGGCAGCTGACACGTGCGTTTTTCCCCGTCACACTGAG +
Preference number: 5 (lower is better)
Translates to: GQTSRPPETCSHQLK*WQAADTCVFPRHTE
Trigger: CTCAGTGTGACGGGGAAAAACGCACGTGTCAGCTGCCTGCCATCACTTAAGTTGGTGGCTGCACGTCTCAGGTGGCCGAGAGGTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS CCA 90 bp GATCCTCTCTCTGTTGCCCCTGCCGCTCCCACAGGCTGGAAAGCGTaGAAAGAAGGTGTCCTGCTGGGTCTTGTCCCCTTCCTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: DPLSVAPAAPTGWKA*KEGVLLGLVPFLLA
Trigger: TGCCAGAAGGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS CCA 90 bp CTGCCGCTCCCACAGGCTGGAAAGCGTGGAAAGAAGGTGTCCTGCTaGGTCTTGTCCCCTTCCTTCTGGCAGTGGCTCTGCTCTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LPLPQAGKRGKKVSC*VLSPSFWQWLCSSR
Trigger: CCTACTAGAGCAGAGCCACTGCCAGAAGGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398341.7
ENST00000419522.5
CDS-3UTR CAA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCACAAGCAGTGCAGTACTaGTGGAGCTCACCCTTAACT +
Preference number: 5 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPAQAVQY*WSSPLT
Trigger: AGTTAAGGGTGAGCTCCACAAGTACTGCACTGCTTG...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CAGGGCCGGCCGGGTCTTCGGTTCTCTGGCTTGGCTCAGGCAGCAGTTCCTGCATCTGGGTCCAGAGGCTaGTTCTTTTCGCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QGRPGLRFSGLAQAAVPASGSRG*FFSLFK
Trigger: CTTGAAGAGCGAAAAGAACAAGCCTCTGGACCCAGA...TGCAGGAACTGCTGCCTGAGCCAAGCCAGAGAACCGAAGACCCGGCCGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: GLGPANPSAGGETASQTSSMQGP*SELSLK
Trigger: TTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGA...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCACCCTCCCGGCCTTGTaGTCACGCGTGCATTTGGGT +
Preference number: 5 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVTLPAL*SRVHLG
Trigger: ACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGT...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGGTGGTTTCCAACCTGGTaGTCGGCCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VLWSEAGCWAWTRQSQCRWFPTW*SAFLML
Trigger: CAACATCAAGAAGGCCGACAACCAGGTTGGAAACCA...CCGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCCAGGTGTGGTGTGTGTaGTGGAGCGAAGCCGGTTGC +
Preference number: 5 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVQVWCV*WSEAGC
Trigger: GCAACCGGCTTCGCTCCACAACACACACCACACCTG...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 90 bp GGGGAGAATGACGACGTGGTTCGGGTGGATGGAGCCCTTCCCATCTaGGAGCAGCAGGCACTGCATCTCTGGGTCCAGAGGCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: GENDDVVRVDGALPI*EQQALHLWVQRLVL
Trigger: AAGAACAAGCCTCTGGACCCAGAGATGCAGTGCCTGCTGCTCTCAGATGGGAAGGGCTCCATCCACCCGAACCACGTCGTCATTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp TCTATAAAGGGAAGAAACGAAGTACAGAGGAACCGTGGCCACTGTTaGCCTCCACTCTCTCGAGGGCCTTCCCCTCGGCCCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SIKGRNEVQRNRGHC*PPLSRGPSPRPSLL
Trigger: GAGGAGGGAGGGCCGAGGGGAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCCCTTTATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS CCA 90 bp CTGCCGCTCCCACAGGCTGGAAAGCGTGGAAAGAAGGTGTCCTGCTaGGTCTTGTCCCCTTCCTTCTGGCAGTGGCTCTGCTCTACAACT +
Preference number: 5 (lower is better)
Translates to: LPLPQAGKRGKKVSC*VLSPSFWQWLCSTT
Trigger: AGTTGTAGAGCAGAGCCACTGCCAGAAGGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398343.2
CDS-3UTR CAA 90 bp TGTGTTGTGGAGCGAAGCCGGTTGCTGGGCTTGGACCCGCCAATCCCAGTGCCGTCCATGCAGGGCCCTTaGTCTGAACTGTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: CVVERSRLLGLDPPIPVPSMQGP*SELSLK
Trigger: TTTCAAGGACAGTTCAGACAAAGGGCCCTGCATGGA...CGGCACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCACAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GGGCTTGGACCCGCCAATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTCAGTACTCGCTCACTTaGATGTTCTGTGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GLGPANPSAGGETASQTSQYSLT*MFCGWN
Trigger: ATTCCAGCCACAGAACATCAAAGTGAGCGAGTACTG...AGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGATTGGCGGGTCCAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTTCGGCCTTCTTGATGTaGTGTGGCGCTGGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LMLCGAGSLLLCWPALSGSAFLM*CGAGSL
Trigger: CAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGA...ACCAGACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGCTGGCCGGCACTGTCTGGTTGTCGGCCTTCTaGATGTTGTGTGGCGCTGGC +
Preference number: 5 (lower is better)
Translates to: LLDVVWRWLSASLLAGTVWLSAF*MLCGAG
Trigger: GCCAGCGCCACACAACATCAAGAAGGCCGACAACCA...GACAGTGCCGGCCAGCAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CACCCTCCCGGCCTTGTTGTCACGCGTGCATTTGGGTGGCTGCATGGGCACACGTGGTTTCCAACCTGGTaGTCGGCCTTCTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: HPPGLVVTRAFGWLHGHTWFPTW*SAFLML
Trigger: CAACATCAAGAAGGCCGACAACCAGGTTGGAAACCA...CGTGTGCCCATGCAGCCACCCAAATGCACGCGTGACAACAAGGCCGGGAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAAGTGGAGCGAAGCCGGTaGCTGGGCTTGGACCCGCCA +
Preference number: 5 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEVERSR*LGLDPP
Trigger: TGGCGGGTCCAAGCCCAGCAACCGGCTTCGCTCCAC...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp AAGGTGTCCTGCTGGGTCTTGTCCCCTTCCTTCTGGCAGTGGCTCTaGTCTAGTAGGCGAGGGAGCAGTGAGTCCCACACTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: KVSCWVLSPSFWQWL*SSRRGSSESHTLFW
Trigger: CCAAAACAGAGTGTGGGACTCACTGCTCCCTCGCCTACTAGAGCAGAGCCACTGCCAGAAGGAAGGGGACAAGACCCAGCAGGACACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398341.7
ENST00000419522.5
CDS CCA 90 bp CACCTGCCAGGATCCCACCAAAGATTCCGCCCACGTCAAACAGGGTaGAGAGCTCCCCCGCCTTTTTGGCATCAAGGTGATCCACATTCG +
Preference number: 5 (lower is better)
Translates to: HLPGSHQRFRPRQTG*RAPPPFWHQGDPHS
Trigger: CGAATGTGGATCACCTTGATGCCAAAAAGGCGGGGGAGCTCTCCACCCTGTTTGACGTGGGCGGAATCTTTGGTGGGATCCTGGCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCGGAGTCTCAATCTGTTaGTACCATTCTCATAGCCTT +
Preference number: 5 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGGVSIC*YHSHSL
Trigger: AAGGCTATGAGAATGGTACAAACAGATTGAGACTCC...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GGGCTCTGGTGTCCTGTTTTTCCATGTGGCACATACAGGTTCTCTGAAGCCACACCACAGTCGGTCTCATaGTCAGGGAGCTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: GLWCPVFPCGTYRFSEATPQSVS*SGSWWG
Trigger: CCCCCACCAGCTCCCTGACAATGAGACCGACTGTGG...TGTGGCTTCAGAGAACCTGTATGTGCCACATGGAAAAACAGGACACCAGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCTTCGCTCTTCAAGATTaGCTTCTGGAGTCTCAATCT +
Preference number: 5 (lower is better)
Translates to: FGALCGWQAWVPPTGGASFALQD*LLESQS
Trigger: AGATTGAGACTCCAGAAGCAAATCTTGAAGAGCGAA...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGGCCTCAAGCCCCATCTaGCTGACGGTGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLASSPI*LTVEKM
Trigger: CATCTTCTCCACCGTCAGCAAGATGGGGCTTGAGGC...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp GTGTGCAAAAGGCAAAGGGAGGTCACTCTTTCCATGCAGGGCCCTTTGTCTGAACCCACCCTCCCGGCCTaGTTGTCACGCGTGCATTTG +
Preference number: 5 (lower is better)
Translates to: VCKRQREVTLSMQGPLSEPTLPA*LSRVHL
Trigger: CAAATGCACGCGTGACAACAAGGCCGGGAGGGTGGG...TTCAGACAAAGGGCCCTGCATGGAAAGAGTGACCTCCCTTTGCCTTTTGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 90 bp TCTGGTATGTGTCAAGTTCTGTGCGACACTGTGGGGTGGAGGCCTTaGGAGGTGCTTAGGGAGGCTGACCTGGAAACACGTTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SGMCQVLCDTVGWRP*EVLREADLETRSSC
Trigger: ACAACTGGAACGTGTTTCCAGGTCAGCCTCCCTAAGCACCTCCCAAGGCCTCCACCCCACAGTGTCGCACAGAACTTGACACATACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484887.1
CDS-3UTR CAA 90 bp CTCTGCTGTGCCCCTGTGCCTGAGCTGAACAGCAGTGCCATGGCCCCGGAGGGCGAGATAAGTGAAAACTaGCATACAGCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: LCCAPVPELNSSAMAPEGEISEN*HTAEMS
Trigger: TGACATTTCTGCTGTATGCAAGTTTTCACTTATCTC...GCCCTCCGGGGCCATGGCACTGCTGTTCAGCTCAGGCACAGGGGCACAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp CCGGACGGACATCACTGTAGGCCGCACCTGCTGAGAGGCCAGAGCTaGCTCCTTGAGAGTGAAGTTGTTTACAGACAAGAGAAGAGATCT +
Preference number: 5 (lower is better)
Translates to: PDGHHCRPHLLRGQS*LLESEVVYRQEKRS
Trigger: AGATCTCTTCTCTTGTCTGTAAACAACTTCACTCTCAAGGAGGCAGCTCTGGCCTCTCAGCAGGTGCGGCCTACAGTGATGTCCGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 90 bp ATCTCTCAATTCTATAAAGGGAAGAAACGAAGTACAGAGGAACCGTaGCCACTGTTGCCCTCCACTCTCTCGAGGGCCTTCCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: ISQFYKGKKRSTEEP*PLLPSTLSRAFPSA
Trigger: GGCCGAGGGGAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCCCTTTATAGAATTGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS-3UTR CAA 90 bp ATCCCAGTGCCGGTGGGGAGACCGCTTCCCAAACCTCTGCTGTGCCCCTGTGCCGAGATAAGTGAAAACTaGCATACAGCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: IPVPVGRPLPKPLLCPCAEISEN*HTAEMS
Trigger: TGACATTTCTGCTGTATGCAAGTTTTCACTTATCTC...GGCACAGGGGCACAGCAGAGGTTTGGGAAGCGGTCTCCCCACCGGCACTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTCTGGGTCCAGAGGCTaGTTCTTTTCGCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSSGSRG*FFSLFK
Trigger: CTTGAAGAGCGAAAAGAACAAGCCTCTGGACCCAGA...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp TTTGGGGCGCTCTGTGGCTGGCAAGCCTGGGTGCCTCCAACCGGAGGTGCTTCCGGGCAGATAAGTATTTaGCTAGACACAACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: FGALCGWQAWVPPTGGASGQISI*LDTTEK
Trigger: TTTTTCAGTTGTGTCTAGCAAAATACTTATCTGCCC...GGAAGCACCTCCGGTTGGAGGCACCCAGGCTTGCCAGCCACAGAGCGCCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 90 bp GATGAAGCGAATGCCAGCGGGGAGTCGAGCCATTTACGTCGCCACTaGCCACTGAGCCTCGGTCGCAGAATAAGATGCTTCATAAATGAG +
Preference number: 5 (lower is better)
Translates to: DEANASGESSHLRRH*PLSLGRRIRCFINE
Trigger: CTCATTTATGAAGCATCTTATTCTGCGACCGAGGCTCAGTGGTCAGTGGCGACGTAAATGGCTCGACTCCCCGCTGGCATTCGCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS-3UTR CAA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCCAAGCAGTGCAGTACTaGTGGAGCTCACCCTTAACT +
Preference number: 5 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRQAVQY*WSSPLT
Trigger: AGTTAAGGGTGAGCTCCACAAGTACTGCACTGCTTG...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp AGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCCAGTACTCGCTCACTTaGATGTTCTGTGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: SSVLVSNLVVGLLDVVWRQYSLT*MFCGWN
Trigger: ATTCCAGCCACAGAACATCAAAGTGAGCGAGTACTG...GCGCCACACAACATCAAGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp AACCTGGTTGTCGGCCTTCTTGATGTTGTGTGGCGCTGGCTCTCTGCTTCTCTGTTCGCTCTTCAAGATTaGCTTCTGGAGTCTCAATCT +
Preference number: 5 (lower is better)
Translates to: NLVVGLLDVVWRWLSASLFALQD*LLESQS
Trigger: AGATTGAGACTCCAGAAGCAAATCTTGAAGAGCGAA...CAGAGAAGCAGAGAGCCAGCGCCACACAACATCAAGAAGGCCGACAACCAGGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTAGCCGGTTGCTGGGCTaGGACCCGCCAATCCCAGTG +
Preference number: 5 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCSRLLG*DPPIPV
Trigger: CACTGGGATTGGCGGGTCCAAGCCCAGCAACCGGCT...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTCAGATCCTCTCTCTGTaGCCCCTGCCGCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCQILSL*PLPLPQ
Trigger: CTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATCTG...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp CGATGTGGTGGGTCTGAGCTCCGTCTTGGTTTCCAACCTGGTTGTCGGCCTTCTGGGCAGATAAGTATTTaGCTAGACACAACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: RCGGSELRLGFQPGCRPSGQISI*LDTTEK
Trigger: TTTTTCAGTTGTGTCTAGCAAAATACTTATCTGCCC...AGAAGGCCGACAACCAGGTTGGAAACCAAGACGGAGCTCAGACCCACCACATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGAACCGTGGCCACTGTaGCCCTCCACTCTCTCGAGG +
Preference number: 5 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCEPWPL*PSTLSR
Trigger: CCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTCCTTTTCCAAACCAGTaGCCGAGGCAGGTGACGACG +
Preference number: 5 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCPFPNQ*PRQVTT
Trigger: CGTCGTCACCTGCCTCGGCAACTGGTTTGGAAAAGG...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 90 bp TGTTTTGGTGAGAGTGGGGATAGGTCCGGCCATTCTCGGAGGCAATaGAGCAACATGTATTTAGGCTCAGCAATCTCTCAATTCTATAAA +
Preference number: 5 (lower is better)
Translates to: CFGESGDRSGHSRRQ*SNMYLGSAISQFYK
Trigger: TTTATAGAATTGAGAGATTGCTGAGCCTAAATACATGTTGCTGCATTGCCTCCGAGAATGGCCGGACCTATCCCCACTCTCACCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398341.7
ENST00000419522.5
ENST00000484887.1
CDS CCA 90 bp TGCTCTGGAAGATCAGCAGCTTATTCACCGCGTGGATTTGGCTTCTaGGATTCTCCCATCAAGACCAAATCCTATAGTTATTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: CSGRSAAYSPRGFGF*DSPIKTKSYSYSVT
Trigger: AGTGACTGAATAACTATAGGATTTGGTCTTGATGGGAGAATCCCAGAAGCCAAATCCACGCGGTGAATAAGCTGCTGATCTTCCAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS GCA 90 bp ATGCCTGGCATGGCCTTAGGTCCTGTTTGTAAGTTGGTATCTTACTaGCACAGCGTCCATTCTGTCAGTCTTATGATCTCTATTTTAACA +
Preference number: 5 (lower is better)
Translates to: MPGMALGPVCKLVSY*HSVHSVSLMISILT
Trigger: TGTTAAAATAGAGATCATAAGACTGACAGAATGGACGCTGTGGCAGTAAGATACCAACTTACAAACAGGACCTAAGGCCATGCCAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS-3UTR CAA 90 bp ATAAATAACCCAGTCTGTTGCTATGTATTAAAAACAGTCCCAGGTGTGGTGTGTGGAGTCTCAATCTGTTaGTACCATTCTCATAGCCTT +
Preference number: 5 (lower is better)
Translates to: INNPVCCYVLKTVPGVVCGVSIC*YHSHSL
Trigger: AAGGCTATGAGAATGGTACAAACAGATTGAGACTCC...ACACACCACACCTGGGACTGTTTTTAATACATAGCAACAGACTGGGTTATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp CCGGCTCCTCCCTGGGCGGCTGGTCCCCGGAGGAGGTaGATTCCGCGGGCACGCCCACGTCCCCATCGCGGC +
Preference number: 6 (lower is better)
Translates to: PAPPWAAGPRRR*IPRARPRPHRG
Trigger: GCCGCGATGGGGACGTGGGCGTGCCCGCGGAATTCACCTCCTCCGGGGACCAGCCGCCCAGGGAGGAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS CCA 72 bp GAGCCAGCGTTCTGTGCCGGCTCCTCCCTGGGCGGCTaGTCCCCGGAGGAGGTGAATTCCGCGGGCACGCCC +
Preference number: 6 (lower is better)
Translates to: EPAFCAGSSLGG*SPEEVNSAGTP
Trigger: GGGCGTGCCCGCGGAATTCACCTCCTCCGGGGACCAGCCGCCCAGGGAGGAGCCGGCACAGAACGCTGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS GCA 72 bp GCTCCCTCTGCCTCCACTTCCCCGGAATCCCAGCGTTaGCCCGGTCCGGGAACGCCCGGCATTGTCGCCGAG +
Preference number: 6 (lower is better)
Translates to: APSASTSPESQR*PGPGTPGIVAE
Trigger: CTCGGCGACAATGCCGGGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGGGGAAGTGGAGGCAGAGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS CAA 72 bp CGCTCCCTCTGCCTCCACTTCCCCGGAATCCCAGCGTaGCCCCGGTCCGGGAACGCCCGGCATTGTCGCCGA +
Preference number: 6 (lower is better)
Translates to: RSLCLHFPGIPA*PRSGNARHCRR
Trigger: TCGGCGACAATGCCGGGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGGGGAAGTGGAGGCAGAGGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS TCA 72 bp GGCCCAGGGCTGCTCCTACAGAGCCCGTCCCGTCAATaGTGGCCGTCACGGTGGAGAGGGCGTGCGCGTTGC +
Preference number: 6 (lower is better)
Translates to: GPGLLLQSPSRQ*WPSRWRGRARC
Trigger: GCAACGCGCACGCCCTCTCCACCGTGACGGCCATCATTGACGGGACGGGCTCTGTAGGAGCAGCCCTGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000496416.1
CDS TCA 72 bp TGGCGGCCGTGCCACTCCCACCGTCCCCGGGGAGAATaGCGACGTGGTTCGGGTGGATGGAGCCCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: WRPCHSHRPRGE*RRGSGGWSPSH
Trigger: ATGGGAAGGGCTCCATCCACCCGAACCACGTCGTCATTCTCCCCGGGGACGGTGGGAGTGGCACGGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 72 bp AGCTGCTCAGCCGACAAACAACGCAAAGGCCCAGGGTaGCGGCGCTCCGAGCCAGCGTTCTGTGCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: SCSADKQRKGPG*RRSEPAFCAGS
Trigger: GGAGCCGGCACAGAACGCTGGCTCGGAGCGCCGGCACCCTGGGCCTTTGCGTTGTTTGTCGGCTGAGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS TCA 72 bp AAGGGTCAGCAGAGCCTGCTAGAGGCGCTGCGGCTGTaGTCCAGGCTGGGGCGAGACCATGTCGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: KGQQSLLEALRL*SRLGRDHVGPG
Trigger: CCCAGGTCCGACATGGTCTCGCCCCAGCCTGGATCACAGCCGCAGCGCCTCTAGCAGGCTCTGCTGACCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 72 bp GCGTGGGGGCCGCGAGCAGCAGCATCAGGCCGCAGGTaGAGGCCCTTTTCTCCAGTCGGTCTGAGATCACAC +
Preference number: 6 (lower is better)
Translates to: AWGPRAAASGRR*RPFSPVGLRSH
Trigger: GTGTGATCTCAGACCGACTGGAGAAAAGGGCCTCCACCTGCGGCCTGATGCTGCTGCTCGCGGCCCCCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 72 bp TACCGCGGGAGGGCTGGCCTTAGCCAGGTGGGAAAGTaGCCAGTGGTGACTGGCTGCGGGTGGAGGCAGCTA +
Preference number: 6 (lower is better)
Translates to: YRGRAGLSQVGK*PVVTGCGWRQL
Trigger: TAGCTGCCTCCACCCGCAGCCAGTCACCACTGGCCACTTTCCCACCTGGCTAAGGCCAGCCCTCCCGCGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS TCA 72 bp GAGCGAGAGGAGAGGACGGCGATCGTAGGGGACACCTaGGAGTCAGAGGCCCGAGGGGGCTGGGACTCATGT +
Preference number: 6 (lower is better)
Translates to: EREERTAIVGDT*ESEARGGWDSC
Trigger: ACATGAGTCCCAGCCCCCTCGGGCCTCTGACTCTCAGGTGTCCCCTACGATCGCCGTCCTCTCCTCTCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 72 bp GTGCCACTCCCACCGTCCCCGGGGAGAATGACGACGTaGTTCGGGTGGATGGAGCCCTTCCCATCTGAGAGC +
Preference number: 6 (lower is better)
Translates to: VPLPPSPGRMTT*FGWMEPFPSES
Trigger: GCTCTCAGATGGGAAGGGCTCCATCCACCCGAACCACGTCGTCATTCTCCCCGGGGACGGTGGGAGTGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 72 bp CAGGCAAAGAGCTTCTCGGTCACCAGGATTACGGCGTaGGCCGTAAGGGCTGGAAGGCTGGTGGCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: QAKSFSVTRITA*AVRAGRLVASG
Trigger: GCCGCTGGCCACCAGCCTTCCAGCCCTTACGGCCCACGCCGTAATCCTGGTGACCGAGAAGCTCTTTGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398343.2
CDS CCA 72 bp GGGTGCGCAGCGGCGGGGGAACCTCGAGGTTGGGTTTaGAGAGTGAGGAGGCGCAGAAACCAGAGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: GCAAAGEPRGWV*RVRRRRNQRSE
Trigger: CTCAGACCTCTGGTTTCTGCGCCTCCTCACTCTCCAAACCCAACCTCGAGGTTCCCCCGCCGCTGCGCACCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS TCA 72 bp GCAGCATGGCGATGGTGGCCTCAAGCCCCATCTTGCTaGCGGTGGAGAAGATGTAGAGCGTGGGGGCCGCGA +
Preference number: 6 (lower is better)
Translates to: AAWRWWPQAPSC*RWRRCRAWGPR
Trigger: TCGCGGCCCCCACGCTCTACATCTTCTCCACCGTCAGCAAGATGGGGCTTGAGGCCACCATCGCCATGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp CAGCGGCGGGGGAACCTCGAGGTTGGGTTTGGAGAGTaGGGAGGCGCAGAAACCAGAGGTCTGAGCCACAGC +
Preference number: 6 (lower is better)
Translates to: QRRGNLEVGFGE*GGAETRGLSHS
Trigger: GCTGTGGCTCAGACCTCTGGTTTCTGCGCCTCCTCACTCTCCAAACCCAACCTCGAGGTTCCCCCGCCGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS GCA 72 bp GGAAGAAACGAAGTACAGAGGAACCGTGGCCACTGTTaGCCTCCACTCTCTCGAGGGCCTTCCCCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GRNEVQRNRGHC*PPLSRGPSPRP
Trigger: GGGCCGAGGGGAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS CAA 72 bp GGGAAGAAACGAAGTACAGAGGAACCGTGGCCACTGTaGCCCTCCACTCTCTCGAGGGCCTTCCCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GKKRSTEEPWPL*PSTLSRAFPSA
Trigger: GGCCGAGGGGAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS CAA 90 bp GATCCAGGCTGGGGCGAGACCATGTCGGACCTGGGCTCGGAGGAGTaGGAGGAGGAGGGAGAGAATGATATTGGGGTGAGAGCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: DPGWGETMSDLGSEE*EEEGENDIGVRAPG
Trigger: ACCAGGAGCTCTCACCCCAATATCATTCTCTCCCTCCTCCTCCAACTCCTCCGAGCCCAGGTCCGACATGGTCTCGCCCCAGCCTGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS CAA 72 bp AATCCCAGCGTTGCCCCGGTCCGGGAACGCCCGGCATaGTCGCCGAGGGCCACTCTTCTAGATGTCGTATTT +
Preference number: 6 (lower is better)
Translates to: NPSVAPVRERPA*SPRATLLDVVF
Trigger: AAATACGACATCTAGAAGAGTGGCCCTCGGCGACAATGCCGGGCGTTCCCGGACCGGGGCAACGCTGGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS CAA 90 bp CTTCCCCGGAATCCCAGCGTTGCCCCGGTCCGGGAACGCCCGGCATaGTCGCCGAGGGCCACTCTTCTAGATGTCGTATTTCAAAGACTT +
Preference number: 6 (lower is better)
Translates to: LPRNPSVAPVRERPA*SPRATLLDVVFQRL
Trigger: AAGTCTTTGAAATACGACATCTAGAAGAGTGGCCCTCGGCGACAATGCCGGGCGTTCCCGGACCGGGGCAACGCTGGGATTCCGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352133.3
CDS TCA 72 bp CAGGCCGCAGGTGGAGGCCCTTTTCTCCAGTCGGTCTaGGATCACACCTGCCAGGATCCCACCAAAGATTCC +
Preference number: 6 (lower is better)
Translates to: QAAGGGPFLQSV*DHTCQDPTKDS
Trigger: GGAATCTTTGGTGGGATCCTGGCAGGTGTGATCTCAGACCGACTGGAGAAAAGGGCCTCCACCTGCGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp CTCAATTCTATAAAGCTGCTAGAGGCGCTGCGGCTGTaGTCCAGGCTGGGGCGAGACCATGTCGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: LNSIKLLEALRL*SRLGRDHVGPG
Trigger: CCCAGGTCCGACATGGTCTCGCCCCAGCCTGGATCACAGCCGCAGCGCCTCTAGCAGCTTTATAGAATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419522.5
CDS GCA 72 bp TGCTGGGTCTTGTCCCCTTCCTTCTGGCAGTGGCTCTaGTCTAGTAGGCGAGGGAGCAGTGAGTCCCACACT +
Preference number: 6 (lower is better)
Translates to: CWVLSPSFWQWL*SSRRGSSESHT
Trigger: AGTGTGGGACTCACTGCTCCCTCGCCTACTAGAGCAGAGCCACTGCCAGAAGGAAGGGGACAAGACCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398341.7
ENST00000419522.5
CDS CCA 72 bp CCACAGGCTGGAAAGCGTGGAAAGAAGGTGTCCTGCTaGGTCTTGTCCCCTTCCTTCTGGCAGTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: PQAGKRGKKVSC*VLSPSFWQWLC
Trigger: GCAGAGCCACTGCCAGAAGGAAGGGGACAAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS CCA 72 bp GATCCTCTCTCTGTTGCCCCTGCCGCTCCCACAGGCTaGAAAGCGTGGAAAGAAGGTGTCCTGCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: DPLSVAPAAPTG*KAWKEGVLLGL
Trigger: AAGACCCAGCAGGACACCTTCTTTCCACGCTTTCCAGCCTGTGGGAGCGGCAGGGGCAACAGAGAGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS CCA 72 bp GTTGTGAAGGGTGGGCCCAGACCCCCTCCACGGGACTaGGGTGGGGTGTCACTGTTCCTTAAATGGAACTTG +
Preference number: 6 (lower is better)
Translates to: VVKGGPRPPPRD*GGVSLFLKWNL
Trigger: CAAGTTCCATTTAAGGAACAGTGACACCCCACCCCAGTCCCGTGGAGGGGGTCTGGGCCCACCCTTCACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CAA 72 bp TGGTCCCCCGTAGCTGACCCTGGGCAGCTCAGCTCCTaGTGTATGAGGCGGATCAGGAACAGTAAGGCACAG +
Preference number: 6 (lower is better)
Translates to: WSPVADPGQLSS*CMRRIRNSKAQ
Trigger: CTGTGCCTTACTGTTCCTGATCCGCCTCATACACAAGGAGCTGAGCTGCCCAGGGTCAGCTACGGGGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CAA 72 bp TGGGGCGAGACCATGTCGGACCTGGGCTCGGAGGAGTaGGAGGAGGAGGGAGAGAATGATATTGGGGTGAGA +
Preference number: 6 (lower is better)
Translates to: WGETMSDLGSEE*EEEGENDIGVR
Trigger: TCTCACCCCAATATCATTCTCTCCCTCCTCCTCCAACTCCTCCGAGCCCAGGTCCGACATGGTCTCGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419522.5
ENST00000454800.1
CDS CAA 90 bp TTCTATAAAGGGAAGAAACGAAGTACAGAGGAACCGTGGCCACTGTaGCCCTCCACTCTCTCGAGGGCCTTCCCCTCGGCCCTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: FYKGKKRSTEEPWPL*PSTLSRAFPSALPP
Trigger: AGGAGGGAGGGCCGAGGGGAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCCCTTTATAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS TCA 72 bp TCTCGGCCACCTGAGACGTGCAGCCACCAACTTAAGTaGTGGCAGGCAGCTGACACGTGCGTTTTTCCCCGT +
Preference number: 6 (lower is better)
Translates to: SRPPETCSHQLK*WQAADTCVFPR
Trigger: ACGGGGAAAAACGCACGTGTCAGCTGCCTGCCATCACTTAAGTTGGTGGCTGCACGTCTCAGGTGGCCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS CAA 72 bp CCCATAATCAAACCTCTCCTTCCTTTTCCAAACCAGTaGCCGAGGCAGGTGACGACGCTGGGCCAGCCGGTG +
Preference number: 6 (lower is better)
Translates to: PIIKPLLPFPNQ*PRQVTTLGQPV
Trigger: CACCGGCTGGCCCAGCGTCGTCACCTGCCTCGGCAACTGGTTTGGAAAAGGAAGGAGAGGTTTGATTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CAA 90 bp AATGGAACTTGGTCCCCCGTAGCTGACCCTGGGCAGCTCAGCTCCTaGTGTATGAGGCGGATCAGGAACAGTAAGGCACAGGCATCTGCA +
Preference number: 6 (lower is better)
Translates to: NGTWSPVADPGQLSS*CMRRIRNSKAQASA
Trigger: TGCAGATGCCTGTGCCTTACTGTTCCTGATCCGCCTCATACACAAGGAGCTGAGCTGCCCAGGGTCAGCTACGGGGGACCAAGTTCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp AATGCCAGCGGGGAGTCGAGCCATTTACGTCGCCACTaGCCACTGAGCCTCGGTCGCAGAATAAGATGCTTC +
Preference number: 6 (lower is better)
Translates to: NASGESSHLRRH*PLSLGRRIRCF
Trigger: GAAGCATCTTATTCTGCGACCGAGGCTCAGTGGTCAGTGGCGACGTAAATGGCTCGACTCCCCGCTGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000398343.2
ENST00000419522.5
ENST00000471277.5
CDS GCA 72 bp TTCAATGAGGAAGAGAAAGCACACTATCCCCATGGCTaGCACGATGGCTCCAGGCACGACGAAGGACAGGCC +
Preference number: 6 (lower is better)
Translates to: FNEEEKAHYPHG*HDGSRHDEGQA
Trigger: GGCCTGTCCTTCGTCGTGCCTGGAGCCATCGTGGCAGCCATGGGGATAGTGTGCTTTCTCTTCCTCATTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000487951.1
CDS CCA 72 bp GGATCCCACCAAAGATTCCGCCCACGTCAAACAGGGTaGAGAGCTCCCCCGCCTTTTTGGCATCAAGGTGAT +
Preference number: 6 (lower is better)
Translates to: GSHQRFRPRQTG*RAPPPFWHQGD
Trigger: ATCACCTTGATGCCAAAAAGGCGGGGGAGCTCTCCACCCTGTTTGACGTGGGCGGAATCTTTGGTGGGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp GGATGTTGTAGAAATACCCTAAGCCGAACAGGGCGGTaGAGGCTCCGCTGGCGAGCATCCCGAAAGTTAGGT +
Preference number: 6 (lower is better)
Translates to: GCCRNTLSRTGR*RLRWRASRKLG
Trigger: ACCTAACTTTCGGGATGCTCGCCAGCGGAGCCTTCACCGCCCTGTTCGGCTTAGGGTATTTCTACAACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp TCACTGTTCCTTAAATGGAACTTGGTCCCCCGTAGCTaGCCCTGGGCAGCTCAGCTCCTTGTGTATGAGGCG +
Preference number: 6 (lower is better)
Translates to: SLFLKWNLVPRS*PWAAQLLVYEA
Trigger: CGCCTCATACACAAGGAGCTGAGCTGCCCAGGGTCAGCTACGGGGGACCAAGTTCCATTTAAGGAACAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS GCA 72 bp CATCACTGTAGGCCGCACCTGCTGAGAGGCCAGAGCTaGCTCCTTGAGAGTGAAGTTGTTTACAGACAAGAG +
Preference number: 6 (lower is better)
Translates to: HHCRPHLLRGQS*LLESEVVYRQE
Trigger: CTCTTGTCTGTAAACAACTTCACTCTCAAGGAGGCAGCTCTGGCCTCTCAGCAGGTGCGGCCTACAGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 72 bp TTCTATAAAGGGAAGAAACGAAGTACAGAGGAACCGTaGCCACTGTTGCCCTCCACTCTCTCGAGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: FYKGKKRSTEEP*PLLPSTLSRAF
Trigger: GAAGGCCCTCGAGAGAGTGGAGGGCAACAGTGGCCACGGTTCCTCTGTACTTCGTTTCTTCCCTTTATAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398341.7
CDS TCA 72 bp AAAAATGAAGGCTCTGTACCACTGATCCCTGGAGAATaGGATGATGAAGCGAATGCCAGCGGGGAGTCGAGC +
Preference number: 6 (lower is better)
Translates to: KNEGSVPLIPGE*DDEANASGESS
Trigger: GCTCGACTCCCCGCTGGCATTCGCTTCATCATCTCATTCTCCAGGGATCAGTGGTACAGAGCCTTCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352133.3
ENST00000398341.7
ENST00000471277.5
CDS GCA 72 bp GAGAGTGGGGATAGGTCCGGCCATTCTCGGAGGCAATaGAGCAACATGTATTTAGGCTCAGCAATCTCTCAA +
Preference number: 6 (lower is better)
Translates to: ESGDRSGHSRRQ*SNMYLGSAISQ
Trigger: TTGAGAGATTGCTGAGCCTAAATACATGTTGCTGCATTGCCTCCGAGAATGGCCGGACCTATCCCCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398341.7
ENST00000419522.5
ENST00000484887.1
CDS CCA 72 bp TGTGTGCTCTGGAAGATCAGCAGCTTATTCACCGCGTaGATTTGGCTTCTGGGATTCTCCCATCAAGACCAA +
Preference number: 6 (lower is better)
Translates to: CVLWKISSLFTA*IWLLGFSHQDQ
Trigger: TTGGTCTTGATGGGAGAATCCCAGAAGCCAAATCCACGCGGTGAATAAGCTGCTGATCTTCCAGAGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CCA 72 bp TTAGCATTGGGAAGAATCTCTAGGGGATGTGTGCTCTaGAAGATCAGCAGCTTATTCACCGCGTGGATTTGG +
Preference number: 6 (lower is better)
Translates to: LALGRISRGCVL*KISSLFTAWIW
Trigger: CCAAATCCACGCGGTGAATAAGCTGCTGATCTTCCAGAGCACACATCCCCTAGAGATTCTTCCCAATGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CAA 90 bp GGGATGTGTGCTCTGGAAGATCAGCAGCTTATTCACCGCGTGGATTaGGCTTCTGGGATTCTCCCATCAAGACCAAATCCTATAGTTATT +
Preference number: 6 (lower is better)
Translates to: GMCALEDQQLIHRVD*ASGILPSRPNPIVI
Trigger: AATAACTATAGGATTTGGTCTTGATGGGAGAATCCCAGAAGCCAAATCCACGCGGTGAATAAGCTGCTGATCTTCCAGAGCACACATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CAA 90 bp CTGCATCTCTGGGTCCAGAGGCTTGTTCTTTTCGCTCTTCAAGATTaGCTTCTGGAGTCTCAATCTGTTTGTACCATTCTCATAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LHLWVQRLVLFALQD*LLESQSVCTILIAF
Trigger: AAAGGCTATGAGAATGGTACAAACAGATTGAGACTCCAGAAGCAAATCTTGAAGAGCGAAAAGAACAAGCCTCTGGACCCAGAGATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS CCA 72 bp AGATCAGCAGCTTATTCACCGCGTGGATTTGGCTTCTaGGATTCTCCCATCAAGACCAAATCCTATAGTTAT +
Preference number: 6 (lower is better)
Translates to: RSAAYSPRGFGF*DSPIKTKSYSY
Trigger: ATAACTATAGGATTTGGTCTTGATGGGAGAATCCCAGAAGCCAAATCCACGCGGTGAATAAGCTGCTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454800.1
CDS CAA 72 bp CGCTCTTCAAGATTTGCTTCTGGAGTCTCAATCTGTTaGTACCATTCTCATAGCCTTTTGAGTGCGTCACCA +
Preference number: 6 (lower is better)
Translates to: RSSRFASGVSIC*YHSHSLLSASP
Trigger: TGGTGACGCACTCAAAAGGCTATGAGAATGGTACAAACAGATTGAGACTCCAGAAGCAAATCTTGAAGAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352133.3
ENST00000398341.7
CDS TCA 72 bp ACAGAATATTCTCTATTCCTAGAACTGCCAATGTTTTaGGGGTGGGACTTCTGTCTACCCTGTGTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: TEYSLFLELPMF*GWDFCLPCVFL
Trigger: CAGAAACACACAGGGTAGACAGAAGTCCCACCCTCAAAACATTGGCAGTTCTAGGAATAGAGAATATTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487951.1
CDS CAA 72 bp AACAGAATATTCTCTATTCCTAGAACTGCCAATGTTTaGAGGGTGGGACTTCTGTCTACCCTGTGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: NRIFSIPRTANV*RVGLLSTLCVS
Trigger: AGAAACACACAGGGTAGACAGAAGTCCCACCCTCAAAACATTGGCAGTTCTAGGAATAGAGAATATTCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487951.1