RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35G1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176273

Ensembl transcript IDs: ENST00000371408.7, ENST00000427197.2, ENST00000483386.5, ENST00000494992.5, ENST00000603665.1, ENST00000605679.5

Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCAAGGCAATTCATGTCCTCTTACCTGGCTGGCAGGCTCATGCTaGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: LQGNSCPLTWLAGSC*LSAGSADGAKCQGL
Trigger: GAGGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGAATTGCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 90 bp GGGAATTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATGCTaGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: GNLSMVCRLWLAGSC*LSAGSADGAKCQGL
Trigger: GAGGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR GCA 90 bp AAACTCCAAGGCAATTCATGTCCTCTTACCTGGCTGGCAGGCTCATaGTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: KLQGNSCPLTWLAGS*WLSAGSADGAKCQG
Trigger: GCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGAATTGCCTTGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR GCA 90 bp TGTGGGAATTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATaGTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGC +
Preference number: 1 (lower is better)
Translates to: CGNLSMVCRLWLAGS*WLSAGSADGAKCQG
Trigger: GCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR TCA 90 bp CCAGGGTCAGGATCATTTATATCACTGTCTTCCGCCTCCACATCTTaGCTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTG +
Preference number: 1 (lower is better)
Translates to: PGSGSFISLSSASTS*LTGRPSGTGTCMEL
Trigger: CAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGAAGACAGTGATATAAATGATCCTGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR TCA 90 bp GGTCAGGATCATTTATATCACTGTCTTCCGCCTCCACATCTTGACTaGCTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGT +
Preference number: 1 (lower is better)
Translates to: GQDHLYHCLPPPHLD*LEGLQGQEHAWSCR
Trigger: ACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGAAGACAGTGATATAAATGATCCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR GCA 90 bp GAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCTaGCAGAGTCACTCTCCTGTCCTTTCTCCTGAGCCTGGCCACCTT +
Preference number: 1 (lower is better)
Translates to: EVTILVYLISTMEQA*QSHSPVLSPEPGHL
Trigger: AAGGTGGCCAGGCTCAGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CCA 90 bp AGGATCATTTATATCACTGTCTTCCGCCTCCACATCTTGACTGACTaGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCC +
Preference number: 1 (lower is better)
Translates to: RIIYITVFRLHILTD*KAFRDRNMHGAVVS
Trigger: GGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGAAGACAGTGATATAAATGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 90 bp CTTCAATCATGGAGATGTGGGAATTTAAGTATGGTCTGCAGACTCTaGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGG +
Preference number: 1 (lower is better)
Translates to: LQSWRCGNLSMVCRL*LAGSCWLSAGSADG
Trigger: CCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR GCA 90 bp TCACTTCTGTATATTCAGATGACTGTGTATAGCTCCATTCTTTCCTaGTTGGAGGCCGTAGGAAGCCAGCTCATGCCTAGGCTCTTGGGC +
Preference number: 1 (lower is better)
Translates to: SLLYIQMTVYSSILS*LEAVGSQLMPRLLG
Trigger: GCCCAAGAGCCTAGGCATGAGCTGGCTTCCTACGGCCTCCAAGCAGGAAAGAATGGAGCTATACACAGTCATCTGAATATACAGAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CCA 90 bp AGAAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATaGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTGAGC +
Preference number: 1 (lower is better)
Translates to: RKAGKSLSWCISSLQ*SKPARVTLLSFLLS
Trigger: GCTCAGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CCA 90 bp CTCAATTATGGAGGCAGCATGAAGTATTGGAAAGGGCAAGGTCTTTaGAGTCAGGCAGACCTCATGGCCCAACCTCATCATTTACTAGTG +
Preference number: 1 (lower is better)
Translates to: LNYGGSMKYWKGQGL*SQADLMAQPHHLLV
Trigger: CACTAGTAAATGATGAGGTTGGGCCATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCTCCATAATTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 90 bp TTATATTCCCTTCAATCATGGAGATGTGGGAATTTAAGTATGGTCTaGAGACTCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGT +
Preference number: 1 (lower is better)
Translates to: LYSLQSWRCGNLSMV*RLWLAGSCWLSAGS
Trigger: ACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAGGGAATATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR CCA 90 bp ATGGTAGCTATGCCTCCAGATTCTTCTCAGCTATTAGGGGTGCTTTaGGGAGAAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTC +
Preference number: 1 (lower is better)
Translates to: MVAMPPDSSQLLGVL*GEKLGSHYLGVSHL
Trigger: GAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAAGCACCCCTAATAGCTGAGAAGAATCTGGAGGCATAGCTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 90 bp AATCCCAAAGTCAAAAACCAACTCTTTCTCCACCACAGTGACAAATaGCTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: NPKVKNQLFLHHSDK*LPVLHSTTLNYGGS
Trigger: GCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCATTTGTCACTGTGGTGGAGAAAGAGTTGGTTTTTGACTTTGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 90 bp GCAAAGTATTGGTCTGATGAAGTTCCAGGTGTAAAACGTGCTGTTTaGATTCATGGCGTTAGTGTCATGGTGCTGCATCATGGTATGGCA +
Preference number: 1 (lower is better)
Translates to: AKYWSDEVPGVKRAV*IHGVSVMVLHHGMA
Trigger: TGCCATACCATGATGCAGCACCATGACACTAACGCCATGAATTCAAACAGCACGTTTTACACCTGGAACTTCATCAGACCAATACTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR CCA 90 bp TACTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATaGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTA +
Preference number: 1 (lower is better)
Translates to: YCPYFIMELRKGGRP*KFNLGRSPLYHPYL
Trigger: TAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR GCA 90 bp TTATATTCCCTTCAATCATGGAGATGTGGGAATTTAAGTATGGTCTaGAGACTCTATGAGGCAAAAGAGGAGGGAGCAAAAGGAAGTCCG +
Preference number: 1 (lower is better)
Translates to: LYSLQSWRCGNLSMV*RLYEAKEEGAKGSP
Trigger: CGGACTTCCTTTTGCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAGGGAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR CCA 90 bp GTGAACTTCAGTTTCATCTTTATATTCCCTTCAATCATGGAGATGTaGGAATTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATG +
Preference number: 1 (lower is better)
Translates to: VNFSFIFIFPSIMEM*EFKYGLQTLAGRLM
Trigger: CATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAGGGAATATAAAGATGAAACTGAAGTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR CCA 90 bp TATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGCATTaGCTAGGATTGTTTATGGCTACTGCCCAACAAATGTTAATTAGT +
Preference number: 1 (lower is better)
Translates to: YDQCEGLTIFGVSLH*LGLFMATAQQMLIS
Trigger: ACTAATTAACATTTGTTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 90 bp CCCTATGTGATGATTTCTGAGACCTCTAGAGTTCTCAAATGCTCCTaGTTCTGTAATTATCTAAGATATTTGCAGAATGATGTTTTTGCA +
Preference number: 1 (lower is better)
Translates to: PYVMISETSRVLKCS*FCNYLRYLQNDVFA
Trigger: TGCAAAAACATCATTCTGCAAATATCTTAGATAATTACAGAATCAGGAGCATTTGAGAACTCTAGAGGTCTCAGAAATCATCACATAGGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR TCA 90 bp ACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTATTAAAAAGGTaGACTTCAGTTTCATCTTTATATTCCCTTCAATCATGGAGATGT +
Preference number: 1 (lower is better)
Translates to: TTLSRILEDIVLLKR*TSVSSLYSLQSWRC
Trigger: ACATCTCCATGATTGAAGGGAATATAAAGATGAAACTGAAGTTCACCTTTTTAATAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR GCA 90 bp AGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTTCACCCAGGCTGGAGTaGAGTGGCGCGATCGTAGCT +
Preference number: 2 (lower is better)
Translates to: RNSLGKLRLNVAGPGFTSSPRLE*SGAIVA
Trigger: AGCTACGATCGCGCCACTGCACTCCAGCCTGGGTGA...AGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp AAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTGTGTGATCTGGCCACCTTaGCCTCCCGAAATGCTGGGA +
Preference number: 2 (lower is better)
Translates to: KQSGEVTAECGWPRVHFCVIWPP*PPEMLG
Trigger: TCCCAGCATTTCGGGAGGCCAAGGTGGCCAGATCAC...ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp ACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCCTGTATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: TDWKAFRDRNMHGAVVSCMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...ACAGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR-3UTR CCA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEAMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR-3UTR CCA 90 bp AGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: RNSLGKLRLNVAGPGFTSMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...AGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CCA 90 bp CTGTCGTCTCCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGTCATGTCCTCTTACCTaGCTGGCAGGCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: LSSPVIAMPSCPYLLKDLSCPLT*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGA...CAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGGAGACGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR-3UTR TCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTTGGCCACCTTTCTTCTaGTTGGCACACTGCACCTGT +
Preference number: 2 (lower is better)
Translates to: LISTMEQACQSHSPVLSPWPPFF*LAHCTC
Trigger: ACAGGTGCAGTGTGCCAATCAGAAGAAAGGTGGCCA...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR GCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTTTCGCTTCTAGCTCTTaGTCTAGGAGGGGAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LISTMEQACQSHSPVLSPFASSS*SRRGRR
Trigger: CCTCCTTCCCCTCCTAGAGCAAGAGCTAGAAGCGAA...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 90 bp ACCAGGGTCAGGATCATTTATATCACTGTCTTCCGCCTCCACATCTaGACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCT +
Preference number: 2 (lower is better)
Translates to: TRVRIIYITVFRLHI*TDWKAFRDRNMHGA
Trigger: AGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGAAGACAGTGATATAAATGATCCTGACCCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR-3UTR TCA 90 bp CATCTGAATCAGGGCCACACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTAAGGAAGTCCGTAAGGTaGGTCAGGGTGACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HLNQGHTTLSRILEDIVLRKSVR*VRVTAQ
Trigger: CTGGGCTGTCACCCTGACTCACCTTACGGACTTCCT...TAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGTGTGGCCCTGATTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp ATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATTTTACAGTTCTCATGTCCTCTTACCTaGCTGGCAGGCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: MPSCPYLLKDLPEAILQFSCPLT*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGA...GAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR-3UTR CCA 90 bp CTGTCGTCTCCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGAGGGAACAGCTGGTTTaGCTACACACCTTACTGGTG +
Preference number: 2 (lower is better)
Translates to: LSSPVIAMPSCPYLLKDLREQLV*LHTLLV
Trigger: CACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCT...CAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGGAGACGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CAA 90 bp TGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTATaGGAAAGGGCAAGGTCTTTGGAGTCAGGCAGACCTCATGGCCCA +
Preference number: 2 (lower is better)
Translates to: CSAFYHPQLWRQHEV*ERARSLESGRPHGP
Trigger: TGGGCCATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 90 bp CTTCTGTATATTCAGATGACTGTGTATAGCTCCATTCTTTCCTGCTaGGAGGCCGTAGGAAGCCAGCTCATGCCTAGGCTCTTGGGCAAC +
Preference number: 2 (lower is better)
Translates to: LLYIQMTVYSSILSC*EAVGSQLMPRLLGN
Trigger: GTTGCCCAAGAGCCTAGGCATGAGCTGGCTTCCTACGGCCTCCAAGCAGGAAAGAATGGAGCTATACACAGTCATCTGAATATACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CCA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGATGGTCTGCAGACTCTaGCTGGCAGGCTCATGCTGG +
Preference number: 2 (lower is better)
Translates to: VTPFNLFELQFPISLSPKMVCRL*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCAT...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR GCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGGCGTTAGTGTCATGGTaGTGCATCATGGTATGGCAC +
Preference number: 2 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTALVSW*CIMVWH
Trigger: GTGCCATACCATGATGCAGCACCATGACACTAACGC...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp CTGTCGTCTCCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGTTAACAGGGAACAGCTaGTTTGGCTACACACCTTAC +
Preference number: 2 (lower is better)
Translates to: LSSPVIAMPSCPYLLKDLLTGNS*FGYTPY
Trigger: GTAAGGTGTGTAGCCAAACCAGCTGTTCCCTGTTAA...CAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGGAGACGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CAA 90 bp TTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTaGGGCAGGTCTCCTCTCTATCATCCCTATCTACGAAGCATGGCC +
Preference number: 2 (lower is better)
Translates to: FIMELRKGGRPWKFN*GRSPLYHPYLRSMA
Trigger: GGCCATGCTTCGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGGACAGATGCTTCATCTaGCACAGTAAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTDRCFI*HSKSWK
Trigger: CTTCCAGCTCTTACTGTGTCAGATGAAGCATCTGTC...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR TCA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGAGGTCTGCAGACTCTATaGGGCAAAAGAGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRGLQTL*GKRGGS
Trigger: GCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACC...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGCGTTAGTGTCATGGTaGTGCATCATGGTATGGCAC +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKALVSW*CIMVWH
Trigger: GTGCCATACCATGATGCAGCACCATGACACTAACGC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGAATTTAAGTATGGTCTaGAGACTCTGGCTGGCAGGC +
Preference number: 2 (lower is better)
Translates to: FRLRVSRIVESGAQACSWNLSMV*RLWLAG
Trigger: GCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATT...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR CCA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 2 (lower is better)
Translates to: VTPFNLFELQFPISLSPKMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTTTCCACACCCATATATaGAAAGCTTCCTTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: LISTMEQACQSHSPVLSPFHTHI*KASLLF
Trigger: GAAGAGCAAGGAAGCTTTCCATATATGGGTGTGGAA...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGATACTCCCTAAGTCCTaGCTAACCTCCCAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTILPKS*LTSQAF
Trigger: AAAAGCTTGGGAGGTTAGTCAGGACTTAGGGAGTAT...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAATTCAGGATGGAAACGTaGACACTGGTCATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKFRMET*TLVMPR
Trigger: TCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAA...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGAATGACTCCCTGTTCTaGATTCTACCACCCTCAATT +
Preference number: 2 (lower is better)
Translates to: VESGAQACSWTDQGFENKNDSLF*ILPPSI
Trigger: AATTGAGGGTGGTAGAATGCAGAACAGGGAGTCATT...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGTGGAAACGTGCACACTaGTCATGCCAAGATTTCTCT +
Preference number: 2 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTWKRAH*SCQDFS
Trigger: AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCA...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp GGGAATTTAAGTATGGTCTGCAGACTCTATGAGGCAAAAGAGGAGGGAGCAAAAGCAGCCTTAAACTCCTaGACTCAAGTGATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: GNLSMVCRLYEAKEEGAKAALNS*TQVIWP
Trigger: TGGCCAGATCACTTGAGTCCAGGAGTTTAAGGCTGC...TTTTGCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACCATACTTAAATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR TCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAATACTCCCTAAGTCCTaGCTAACCTCCCAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKILPKS*LTSQAF
Trigger: AAAAGCTTGGGAGGTTAGTCAGGACTTAGGGAGTAT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAAGAGCTGGAAGCTATTaGAACCTCACCAATAAAGGG +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKRAGSY*NLTNKG
Trigger: CCCTTTATTGGTGAGGTTGCAATAGCTTCCAGCTCT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGAAAACACTTCAGGATaGAAACGTGCACACTGGTCA +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKENTSG*KRAHWS
Trigger: TGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp CAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCTAAAGGGCAAGGTCTTTaGAGTCAGGCAGACCTCATG +
Preference number: 2 (lower is better)
Translates to: QESLKPEVHKAQDKYDTSKGQGL*SQADLM
Trigger: CATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTT...AGATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR TCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTCCTCTCACCAACTTaGCCCCAACAACAACAACAA +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQLLSPT*PQQQQQ
Trigger: TTGTTGTTGTTGTTGGGGTCAAGTTGGTGAGAGGAG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR TCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGTAAAACGTGCTGTTTaGATTCATGGCGTTAGTGTC +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKVKRAV*IHGVSV
Trigger: GACACTAACGCCATGAATTCAAACAGCACGTTTTAC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR TCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGGACAGATGCTTCATCTaGCACAGTAAGAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLDRCFI*HSKSWK
Trigger: CTTCCAGCTCTTACTGTGTCAGATGAAGCATCTGTC...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATTCAGGATGGAAACGTaGACACTGGTCATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQFRMET*TLVMPR
Trigger: TCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGACCTCGCCCTTCAGCTaGCAAAGGCAACCAATGTTA +
Preference number: 2 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLTSPFS*QRQPML
Trigger: TAACATTGGTTGCCTTTGGCAGCTGAAGGGCGAGGT...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAATGGCGTTAGTGTCATaGTGCTGCATCATGGTATGG +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQMALVS*CCIMVW
Trigger: CCATACCATGATGCAGCACCATGACACTAACGCCAT...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCTAACTGCAAAGTATTaGTCTGATGAAGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTLTAKY*SDEVPG
Trigger: ACCTGGAACTTCATCAGACCAATACTTTGCAGTTAG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATGGAAACGTGCACACTaGTCATGCCAAGATTTCTCT +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQWKRAH*SCQDFS
Trigger: AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAGAAAACACTTCAGGATaGAAACGTGCACACTGGTCA +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQENTSG*KRAHWS
Trigger: TGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTC...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAACTAACTGCAAAGTATTaGTCTGATGAAGTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKLTAKY*SDEVPG
Trigger: ACCTGGAACTTCATCAGACCAATACTTTGCAGTTAG...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCCTATCTACGAAGCATaGCCCCTATGTGATGATTTC +
Preference number: 2 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLPIYEA*PLCDDF
Trigger: GAAATCATCACATAGGGGCCATGCTTCGTAGATAGG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATGATTTGAGCTTGAAGTaGGCAGCTTTAGGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHDLSLK*AALGLG
Trigger: CCCTAAGCCTAAAGCTGCCCACTTCAAGCTCAAATC...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 90 bp CACCTCGCCCTTCAGCTGCCAAAGGCAACCAATGTTAACAGTTTCTaGCATATCCTCCTGGAATATTCTGTTTACCCTCTTTTTATACAA +
Preference number: 2 (lower is better)
Translates to: HLALQLPKATNVNSF*HILLEYSVYPLFIQ
Trigger: TTGTATAAAAAGAGGGTAAACAGAATATTCCAGGAGGATATGCAAGAAACTGTTAACATTGGTTGCCTTTGGCAGCTGAAGGGCGAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGTCTTGCATATCCTCCTaGAATATTCTGTTTACCCTC +
Preference number: 2 (lower is better)
Translates to: VTPFNLFELQFPISLSPKSCISS*NILFTL
Trigger: GAGGGTAAACAGAATATTCCAGGAGGATATGCAAGA...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp CAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCTTACCACCCTCAATTATaGAGGCAGCATGAAGTATTG +
Preference number: 2 (lower is better)
Translates to: QESLKPEVHKAQDKYDTSYHPQL*RQHEVL
Trigger: CAATACTTCATGCTGCCTCCATAATTGAGGGTGGTA...AGATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 90 bp TCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTaGCATTGGCTAGGATTGTTTATGGCTACTGCCCAACAAATGTTA +
Preference number: 2 (lower is better)
Translates to: SSYDQCEGLTIFGVS*HWLGLFMATAQQML
Trigger: TAACATTTGTTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR TCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCCTCCTCTCACCAACTTaGCCCCAACAACAACAACAA +
Preference number: 2 (lower is better)
Translates to: CIINTIKQAPILSFNFILLLSPT*PQQQQQ
Trigger: TTGTTGTTGTTGTTGGGGTCAAGTTGGTGAGAGGAG...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR TCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGTTTTTCTTCAAACAATaGGCTCTCCTCTCACCAACT +
Preference number: 2 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLFFFKQ*ALLSPT
Trigger: AGTTGGTGAGAGGAGAGCTCATTGTTTGAAGAAAAA...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAATAACCTTTCAACTCTaGAGGCTTAAGATAATGACA +
Preference number: 2 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKITFQL*RLKIMT
Trigger: TGTCATTATCTTAAGCCTGCAGAGTTGAAAGGTTAT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR CAA 90 bp TGTGAGGGCTTGACAATATTTGGTGTTTCCTTGCATTGGCTAGGATaGTTTATGGCTACTGCCCAACAAATGTTAATTAGTAGATCGGAA +
Preference number: 2 (lower is better)
Translates to: CEGLTIFGVSLHWLG*FMATAQQMLISRSE
Trigger: TTCCGATCTACTAATTAACATTTGTTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAAGGAAACACCAAATATTGTCAAGCCCTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR TCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCAATGCAGGAAACTATaGAAGTCAATCAAACATGGA +
Preference number: 2 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLQCRKL*KSIKHG
Trigger: TCCATGTTTGATTGACTTTCATAGTTTCCTGCATTG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR GCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATCCAATGCACACATGCTaGAAAGTACCAAAGACTTCT +
Preference number: 2 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINPMHTC*KVPKTS
Trigger: AGAAGTCTTTGGTACTTTGCAGCATGTGTGCATTGG...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACCCCATTGGAACTATTaGAAAAGATTCTTTCTCACT +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQPHWNY*KRFFLT
Trigger: AGTGAGAAAGAATCTTTTCCAATAGTTCCAATGGGG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp GTCATGTTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTAGTAAATCTGATAGATaGTGCCAAATTGCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: VMFASSYDQCEGLTIFGVSKSDR*CQIALP
Trigger: AGGAAGGGCAATTTGGCACCATCTATCAGATTTACT...AACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAGTTATTTACCCACCTaGTTCAAAATTCAAAAGGTG +
Preference number: 2 (lower is better)
Translates to: KSWEVTILVYLISTMEQASYLPT*FKIQKV
Trigger: CACCTTTTGAATTTTGAACCAGGTGGGTAAATAACT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATTACCACCCTCAATTATaGAGGCAGCATGAAGTATTG +
Preference number: 2 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINYHPQL*RQHEVL
Trigger: CAATACTTCATGCTGCCTCCATAATTGAGGGTGGTA...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR GCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATAGTTCCATTTCTTCTTaGTATTACAAATCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHSSISS*YYKSGW
Trigger: CCAGCCTGATTTGTAATAGCAAGAAGAAATGGAACT...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAAGTTCCTCTTTGCTTTaGAAAAATTATGATGAGAGG +
Preference number: 2 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQSSSLL*KNYDER
Trigger: CCTCTCATCATAATTTTTCCAAAGCAAAGAGGAACT...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATTATTCCCTTCAATCATaGAGATGTGGGAATTTAAGT +
Preference number: 2 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHYSLQS*RCGNLS
Trigger: ACTTAAATTCCCACATCTCCATGATTGAAGGGAATA...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp GGCAATTCATGTCCTCTTACCTGGCTGGCAGGCTCATaGTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: GNSCPLTWLAGS*WLSAGSADGAK
Trigger: CTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGAATTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR GCA 72 bp TTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATaGTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: LSMVCRLWLAGS*WLSAGSADGAK
Trigger: CTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR CAA 90 bp GGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCCTGTGATAGCACAGGGAACAGCTGGTTaGGCTACACACCTTACTGGT +
Preference number: 3 (lower is better)
Translates to: GRPSGTGTCMELSSPVIAQGTAG*ATHLTG
Trigger: ACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCTG...TGCTATCACAGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 72 bp AATTCATGTCCTCTTACCTGGCTGGCAGGCTCATGCTaGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGT +
Preference number: 3 (lower is better)
Translates to: NSCPLTWLAGSC*LSAGSADGAKC
Trigger: ACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 72 bp GTCCTTTCTCCTGAGCCTGGCCACCTTTCTTCTGATTaGCACACTGCACCTGTAGAAACAGTCTGGGGAAGT +
Preference number: 3 (lower is better)
Translates to: VLSPEPGHLSSD*HTAPVETVWGS
Trigger: ACTTCCCCAGACTGTTTCTACAGGTGCAGTGTGCCAATCAGAAGAAAGGTGGCCAGGCTCAGGAGAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CAA 90 bp ACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCCTGTGATACCATTCCCCTGTGCTTaGTTTAGGACCTTTCCTGAT +
Preference number: 3 (lower is better)
Translates to: TGRPSGTGTCMELSSPVIPFPCA*FRTFPD
Trigger: ATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGG...TATCACAGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 72 bp TATATCACTGTCTTCCGCCTCCACATCTTGACTGACTaGAAGGCCTTCAGGGACAGGAACATGCATGGAGCT +
Preference number: 3 (lower is better)
Translates to: YITVFRLHILTD*KAFRDRNMHGA
Trigger: AGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGAAGACAGTGATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CCA 72 bp TGGAGATGTGGGAATTTAAGTATGGTCTGCAGACTCTaGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGT +
Preference number: 3 (lower is better)
Translates to: WRCGNLSMVCRL*LAGSCWLSAGS
Trigger: ACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR CAA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTAGGCAGCATGAAGTATaGGAAAGGGCAAGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: LISTMEQACQSHSPVLSPRQHEV*ERARSL
Trigger: CAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 72 bp GGCAAAAGAGGAGGGAGCAAAAGGAAGTCCGTAAGGTaGGTCAGGGTGACAGCCCAGATTAAAGCAGTAAAC +
Preference number: 3 (lower is better)
Translates to: GKRGGSKRKSVR*VRVTAQIKAVN
Trigger: GTTTACTGCTTTAATCTGGGCTGTCACCCTGACTCACCTTACGGACTTCCTTTTGCTCCCTCCTCTTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR GCA 72 bp ATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCTaGCAGAGTCACTCTCCTGTCCTTTCTCCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: ILVYLISTMEQA*QSHSPVLSPEP
Trigger: AGGCTCAGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAGATACACCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CCA 72 bp GGTGCTTTGGGGAGAAAAGCTGGGAAGTCACTATCTTaGTGTATCTCATCTCTACAATGGAGCAAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: GALGRKAGKSLS*CISSLQWSKPA
Trigger: GGCAGGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CAA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTTTGCATTGGCTAGGATaGTTTATGGCTACTGCCCAA +
Preference number: 3 (lower is better)
Translates to: LISTMEQACQSHSPVLSPLHWLG*FMATAQ
Trigger: TTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAA...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp CTTCAATCATGGAGATGTGGGAATTTAAGTATGGTCTaGAGACTCTGGCTGGCAGGCTCATGCTGGCTATCA +
Preference number: 3 (lower is better)
Translates to: LQSWRCGNLSMV*RLWLAGSCWLS
Trigger: TGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR CAA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGAGGCAGCATGAAGTATaGGAAAGGGCAAGGTCTTTG +
Preference number: 3 (lower is better)
Translates to: FRLRVSRIVESGAQACSWRQHEV*ERARSL
Trigger: CAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCT...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CAA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGTGGTGTTTCCTTGCATaGGCTAGGATTGTTTATGGC +
Preference number: 3 (lower is better)
Translates to: FRLRVSRIVESGAQACSWWCFLA*ARIVYG
Trigger: GCCATAAACAATCCTAGCCAATGCAAGGAAACACCA...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CCA 72 bp AGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTaGACAGACCAGGGTTTTGAGAATAAGACTCTTGAC +
Preference number: 3 (lower is better)
Translates to: SRIVESGAQACS*TDQGFENKTLD
Trigger: GTCAAGAGTCTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR-3UTR CAA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCAGGTGTCAAGGCAATaGATAAAATCAGCAAGCCAA +
Preference number: 3 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTQVSRQ*IKSASQ
Trigger: TTGGCTTGCTGATTTTATCAATTGCCTTGACACCTG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR TCA 72 bp GAGATGTGGGAATTTAAGTATGGTCTGCAGACTCTATaGGGCAAAAGAGGAGGGAGCAAAAGGAAGTCCGTA +
Preference number: 3 (lower is better)
Translates to: EMWEFKYGLQTL*GKRGGSKRKSV
Trigger: TACGGACTTCCTTTTGCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACCATACTTAAATTCCCACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR TCA 72 bp TGGTCTGATGAAGTTCCAGGTGTAAAACGTGCTGTTTaGATTCATGGCGTTAGTGTCATGGTGCTGCATCAT +
Preference number: 3 (lower is better)
Translates to: WSDEVPGVKRAV*IHGVSVMVLHH
Trigger: ATGATGCAGCACCATGACACTAACGCCATGAATTCAAACAGCACGTTTTACACCTGGAACTTCATCAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR TCA 72 bp GTCAAAAACCAACTCTTTCTCCACCACAGTGACAAATaGCTCCCTGTTCTGCATTCTACCACCCTCAATTAT +
Preference number: 3 (lower is better)
Translates to: VKNQLFLHHSDK*LPVLHSTTLNY
Trigger: ATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCATTTGTCACTGTGGTGGAGAAAGAGTTGGTTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 72 bp GCTCTTGGGCAACATCTTGCTGTAGCCCACGCAAACTaGTTATATAGTCCATATATGTCATGTTTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: ALGQHLAVAHAN*LYSPYMSCLLP
Trigger: TGGAAGCAAACATGACATATATGGACTATATAATCAGTTTGCGTGGGCTACAGCAAGATGTTGCCCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR TCA 72 bp CAATATAATGAAAATAAACAGGCTTGTTGCAGGGACTaGAGGAGCCAGACCACAAAACTAGCTAGGACAGAC +
Preference number: 3 (lower is better)
Translates to: QYNENKQACCRD*RSQTTKLARTD
Trigger: GTCTGTCCTAGCTAGTTTTGTGGTCTGGCTCCTTCAGTCCCTGCAACAAGCCTGTTTATTTTCATTATATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp GATGCTTCATCTGACACAGTAAGAGCTGGAAGCTATTaGAACCTCACCAATAAAGGGCTCATTACAACAAGT +
Preference number: 3 (lower is better)
Translates to: DASSDTVRAGSY*NLTNKGLITTS
Trigger: ACTTGTTGTAATGAGCCCTTTATTGGTGAGGTTGCAATAGCTTCCAGCTCTTACTGTGTCAGATGAAGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR GCA 72 bp CTTCAATCATGGAGATGTGGGAATTTAAGTATGGTCTaGAGACTCTATGAGGCAAAAGAGGAGGGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: LQSWRCGNLSMV*RLYEAKEEGAK
Trigger: TTTTGCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR-3UTR CAA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCCCCCATTGGAACTATaGGAAAAGATTCTTTCTCAC +
Preference number: 3 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLPPLEL*EKILSH
Trigger: GTGAGAAAGAATCTTTTCCAATAGTTCCAATGGGGG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CAA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGACGCTTTCTAGGATCTaGGAGGATATAGTCCTATTA +
Preference number: 3 (lower is better)
Translates to: VTPFNLFELQFPISLSPKTLSRI*EDIVLL
Trigger: TAATAGGACTATATCCTCCAAGATCCTAGAAAGCGT...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp AACACTCATGCAGGCTTATTTCATACATGTAGTCACTaGACCAGGGTCAGGATCATTTATATCACTGTCTTC +
Preference number: 3 (lower is better)
Translates to: NTHAGLFHTCSH*TRVRIIYITVF
Trigger: GAAGACAGTGATATAAATGATCCTGACCCTGGTGCAGTGACTACATGTATGAAATAAGCCTGCATGAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494992.5
3UTR CCA 72 bp AGTTTCATCTTTATATTCCCTTCAATCATGGAGATGTaGGAATTTAAGTATGGTCTGCAGACTCTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SFIFIFPSIMEM*EFKYGLQTLAG
Trigger: GCCAGCCAGAGTCTGCAGACCATACTTAAATTCCCACATCTCCATGATTGAAGGGAATATAAAGATGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
3UTR-3UTR CAA 90 bp CAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCTATATTTGGTGTTTCCTaGCATTGGCTAGGATTGTTT +
Preference number: 3 (lower is better)
Translates to: QESLKPEVHKAQDKYDTSIFGVS*HWLGLF
Trigger: AAACAATCCTAGCCAATGCAAGGAAACACCAAATAT...AGATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp TTTCTAGTGAAGAGAAAACACTTCAGGATGGAAACGTaGACACTGGTCATGCCAAGATTTCTCTTTGTGATT +
Preference number: 3 (lower is better)
Translates to: FLVKRKHFRMET*TLVMPRFLFVI
Trigger: AATCACAAAGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCTTCACTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR-3UTR CAA 90 bp ACTGAAATATATGCAGTGTTGTCATCACCTTCTATTCTTTCGCTTCTAGCTCTTAAGATTAAGAAGCTCTaGGCTGGGATGAGGTTTATT +
Preference number: 3 (lower is better)
Translates to: TEIYAVLSSPSILSLLALKIKKL*AGMRFI
Trigger: AATAAACCTCATCCCAGCCAAGAGCTTCTTAATCTT...AAGAGCTAGAAGCGAAAGAATAGAAGGTGATGACAACACTGCATATATTTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR GCA 72 bp CATATCATTTTGCACATAAGTAAATCTGATAGATGGTaGCAAATTGCCCTTCCTAGAAGTTGTACCAATGCA +
Preference number: 3 (lower is better)
Translates to: HIILHISKSDRW*QIALPRSCTNA
Trigger: TGCATTGGTACAACTTCTAGGAAGGGCAATTTGGCACCATCTATCAGATTTACTTATGTGCAAAATGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR GCA 72 bp CTATTGAGGGACATTCAGGCTAGTTCCATTTCTTCTTaGTATTACAAATCAGGCTGGAATAAACTTGTACAT +
Preference number: 3 (lower is better)
Translates to: LLRDIQASSISS*YYKSGWNKLVH
Trigger: ATGTACAAGTTTATTCCAGCCTGATTTGTAATAGCAAGAAGAAATGGAACTAGCCTGAATGTCCCTCAATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR TCA 72 bp ACAACAAGTAACCATTTATGTATACTCCCTAAGTCCTaGCTAACCTCCCAAGCTTTTCTAGATATTAAATTC +
Preference number: 3 (lower is better)
Translates to: TTSNHLCILPKS*LTSQAFLDIKF
Trigger: GAATTTAATATCTAGAAAAGCTTGGGAGGTTAGTCAGGACTTAGGGAGTATACATAAATGGTTACTTGTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR CCA 72 bp TTTCTAGATATTAAATTCTCTCTAACTGCAAAGTATTaGTCTGATGAAGTTCCAGGTGTAAAACGTGCTGTT +
Preference number: 3 (lower is better)
Translates to: FLDIKFSLTAKY*SDEVPGVKRAV
Trigger: AACAGCACGTTTTACACCTGGAACTTCATCAGACCAATACTTTGCAGTTAGAGAGAATTTAATATCTAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCCCGCCGGCTCCTCAGTaGCGCCCGGGGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: QAHAGYQLVVQMGPSVRAPPAPQ*RPGVHR
Trigger: ACGATGCACCCCCGGGCGCCACTGAGGAGCCGGCGG...GGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000483386.5
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS-3UTR CCA 90 bp CAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCGCACCTACCGCGGTCTaGCGCCCCAGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QAHAGYQLVVQMGPSVRAAPTAV*RPSCLG
Trigger: GCCGAGGCAGCTGGGGCGCCAGACCGCGGTAGGTGC...GGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS-3UTR CCA 90 bp TCATGTCCTCTTACCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCACCGCCGGCTCCTCAGTaGCGCCCGGGGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: SCPLTWLAGSCWLSAGSAPPAPQ*RPGVHR
Trigger: ACGATGCACCCCCGGGCGCCACTGAGGAGCCGGCGG...TGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCTGGGGAAGTTACGGCTaGATGTGGCTGGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVWGSYG*MWLAQG
Trigger: ACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCA...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp TTGGCACACTGCACCTGTAGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTACCCCGGTGCTGTCCTaGGGCCGCATCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LAHCTCRNSLGKLRLNVATPVLS*GRISRH
Trigger: GTGCCGCGAGATGCGGCCTCAGGACAGCACCGGGGT...AGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCTACAGGTGCAGTGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATGTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEAMWPAR*GSNTAR
Trigger: CCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACAT...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp CAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCGGTCTGCAGACTCTATaGGGCAAAAGAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QAHAGYQLVVQMGPSVRAGLQTL*GKRGGS
Trigger: GCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACC...GGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR TCA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCCCTCCACATCTTGACTaGCTGGAAGGCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVPPHLD*LEGLQG
Trigger: TCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGG...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR GCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTGCTCCGCGACCCCGGTaGTGTCCTGAGGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPAPRPR*CPEAAS
Trigger: AGATGCGGCCTCAGGACAGCACCGGGGTCGCGGAGC...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp CTGTCGTCTCCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGATGTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSSPVIAMPSCPYLLKDLMWPAR*GSNTAR
Trigger: CCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACAT...CAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGGAGACGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCCGCCGGCTCCTCAGTaGCGCCCGGGGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTPPAPQ*RPGVHR
Trigger: ACGATGCACCCCCGGGCGCCACTGAGGAGCCGGCGG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp TGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATTTTACAGTTCTTAACAGGGGCACCTACCGCGGTCTaGCGCCCCAGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: CPYLLKDLPEAILQFLTGAPTAV*RPSCLG
Trigger: GCCGAGGCAGCTGGGGCGCCAGACCGCGGTAGGTGC...CCCTGTTAAGAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGGAGGTATGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp TGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATTTTACAGTTCTTAACAGGGACCCCGGTGCTGTCCTaGGGCCGCATCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: CPYLLKDLPEAILQFLTGTPVLS*GRISRH
Trigger: GTGCCGCGAGATGCGGCCTCAGGACAGCACCGGGGT...CCCTGTTAAGAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGGAGGTATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGCACCTACCGCGGTCTaGCGCCCCAGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKAPTAV*RPSCLG
Trigger: GCCGAGGCAGCTGGGGCGCCAGACCGCGGTAGGTGC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTGTTTCCTCACAGCAATGTaGCCGGCTCGGTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: KQSGEVTAECGWPRVHFCFLTAM*PARCGS
Trigger: GCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAA...ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTGCACCTACCGCGGTCTaGCGCCCCAGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVAPTAV*RPSCLG
Trigger: GCCGAGGCAGCTGGGGCGCCAGACCGCGGTAGGTGC...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CCA 90 bp TCGTCTCCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTTTCCTCACAGCAATGTaGCCGGCTCGGTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSPVIAMPSCPYLLKDLPFLTAM*PARCGS
Trigger: GCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAA...AGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGGAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTACCCCGGTGCTGTCCTaGGGCCGCATCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSTPVLS*GRISRH
Trigger: GTGCCGCGAGATGCGGCCTCAGGACAGCACCGGGGT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGACCCCGGTGCTGTCCTaGGGCCGCATCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VTPFNLFELQFPISLSPKTPVLS*GRISRH
Trigger: GTGCCGCGAGATGCGGCCTCAGGACAGCACCGGGGT...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp CTTACCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCCCTGAAGGACCTGCCTaGGGCTATTTTACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LTWLAGSCWLSAGSADGAPEGPA*GYFTVL
Trigger: AAGAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGG...GGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGCTCCGCGACCCCGGTaGTGTCCTGAGGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKAPRPR*CPEAAS
Trigger: AGATGCGGCCTCAGGACAGCACCGGGGTCGCGGAGC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCCGCCGGCTCCTCAGTaGCGCCCGGGGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLPPAPQ*RPGVHR
Trigger: ACGATGCACCCCCGGGCGCCACTGAGGAGCCGGCGG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp GGGAATTTAAGTATGGTCTGCAGACTCTATGAGGCAAAAGAGGAGGGAGCAAAACAATGTGGCGCGGTCTaGCGCCCCAGCTGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: GNLSMVCRLYEAKEEGAKQCGAV*RPSCLG
Trigger: GCCGAGGCAGCTGGGGCGCCAGACCGCGCCACATTG...TTTTGCTCCCTCCTCTTTTGCCTCATAGAGTCTGCAGACCATACTTAAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp CAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCCTATTAGGGGTGCTTTaGGGAGAAAAGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QAHAGYQLVVQMGPSVRALLGVL*GEKLGS
Trigger: ACTTCCCAGCTTTTCTCCCCAAAGCACCCCTAATAG...GGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGCCATTCCCCTGTGCTTTGTTTAGGACCTTTCCTGATCCACAACCTTTAGGGTTCCTCACAGCAATGTaGCCGGCTCGGTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPFPCALFRTFPDPQPLGFLTAM*PARCGS
Trigger: GCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAA...CCCTAAAGGTTGTGGATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp AGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTATGGTCTGCAGACTCTaGCTGGCAGGCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: RNSLGKLRLNVAGPGFTSMVCRL*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCAT...AGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR TCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGACCCCGGTGCTGTCCTaGGGCCGCATCTCGCGGCAC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLTPVLS*GRISRH
Trigger: GTGCCGCGAGATGCGGCCTCAGGACAGCACCGGGGT...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCATTATGGAGGCAGCATaGAGTATTGGAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVIMEAA*SIGKGK
Trigger: CTTGCCCTTTCCAATACTTCATGCTGCCTCCATAAT...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp ATCTTGACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCCCTCCACATCTTGACTaGCTGGAAGGCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ILTDWKAFRDRNMHGAVVPPHLD*LEGLQG
Trigger: TCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGG...GACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR GCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTCTACCAGCGGCCGGTaGCGTCTGGCGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSSTSGR*RLAPAA
Trigger: TGCTGCTGGCGCCAGACGGCACCGGCCGCTGGTAGA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp GTAACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGATGTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VTPFNLFELQFPISLSPKMWPAR*GSNTAR
Trigger: CCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACAT...CTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR GCA 90 bp CGCCTCCACATCTTGACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGATCAGGGACAGGAACATaGATGGAGCTGTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLHILTDWKAFRDRNMHGSGTGT*MELSSP
Trigger: AGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGA...TCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp GTCATGTTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTCCGCCGGCTCCTCAGTaGCGCCCGGGGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: VMFASSYDQCEGLTIFGVPPAPQ*RPGVHR
Trigger: ACGATGCACCCCCGGGCGCCACTGAGGAGCCGGCGG...AACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAACATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGAGGGTGCTTTCTTCTTaGCCGGCTCGGTGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTRVLSS*PARCGS
Trigger: GCTCCCGCACCGAGCCGGCCAAGAAGAAAGCACCCT...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371408.7
CDS-3UTR TCA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCACCAATGTGAGGGCTTaGCAATATTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVTNVRA*QYLVFP
Trigger: AGGAAACACCAAATATTGTCAAGCCCTCACATTGGT...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp AAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTGTTGGCCACCTTTCTTCTaGTTGGCACACTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: KQSGEVTAECGWPRVHFCWPPFF*LAHCTC
Trigger: ACAGGTGCAGTGTGCCAATCAGAAGAAAGGTGGCCA...ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp CAGCTGGTTTGGCTACACACCTTACTGGTGAGATTAGTGCCATTCCCCTGTGCTTCCGCCTCCACATCTTaGCTGACTGGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QLVWLHTLLVRLVPFPCASASTS*LTGRPS
Trigger: TGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGA...AGCACAGGGGAATGGCACTAATCTCACCAGTAAGGTGTGTAGCCAAACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATCTACCAGCGGCCGGTaGCGTCTGGCGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQSTSGR*RLAPAA
Trigger: TGCTGCTGGCGCCAGACGGCACCGGCCGCTGGTAGA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAGCTCCGCGACCCCGGTaGTGTCCTGAGGCCGCATCT +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQAPRPR*CPEAAS
Trigger: AGATGCGGCCTCAGGACAGCACCGGGGTCGCGGAGC...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATCTTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQSWPAR*GSNTAR
Trigger: CCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCAAGA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371408.7
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATGGCTTCCGGCTCGGTaGGGGAGCAACACGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQWLPAR*GSNTAR
Trigger: CCTCGCCGTGTTGCTCCCGCACCGAGCCGGAAGCCA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427197.2
CDS-3UTR GCA 90 bp AGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTACAATGGAGCAAGCCTaGCAGAGTCACTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RNSLGKLRLNVAGPGFTSTMEQA*QSHSPV
Trigger: GACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGT...AGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp TTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGACAATGGAGCAAGCCTaGCAGAGTCACTCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: FKYGLQTLAGRLMLAISWTMEQA*QSHSPV
Trigger: GACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGT...CCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CCA 90 bp ATCTTGACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ILTDWKAFRDRNMHGAVVMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...GACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTACGGCTGAATGTGGCTaGCCCAGGGTTCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPTAECG*PRVHFC
Trigger: ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp ACAGCTGGTTTGGCTACACACCTTACTGGTGAGATTAGTGCCATTCCCCTGTGCTCATGTCCTCTTACCTaGCTGGCAGGCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: TAGLATHLTGEISAIPLCSCPLT*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGA...GCACAGGGGAATGGCACTAATCTCACCAGTAAGGTGTGTAGCCAAACCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTCACATCTTGACTGACTaGAAGGCCTTCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEAHILTD*KAFRDR
Trigger: CCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTG...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp ACTGACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCCTGTCCTGAAGGACCTGCCTaGGGCTATTTTACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TDWKAFRDRNMHGAVVSCPEGPA*GYFTVL
Trigger: AAGAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGG...ACAGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp GTGCCATTCCCCTGTGCTTTGTTTAGGACCTTTCCTGATCCACAACCTTTAGGGTCCGCCTCCACATCTTaGCTGACTGGAAGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPFPCALFRTFPDPQPLGSASTS*LTGRPS
Trigger: TGAAGGCCTTCCAGTCAGTCAAGATGTGGAGGCGGA...CCCTAAAGGTTGTGGATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR GCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTAGCTCCATTCTTTCCTaGTTGGAGGCCGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPSSILS*LEAVGS
Trigger: GCTTCCTACGGCCTCCAAGCAGGAAAGAATGGAGCT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCTTCCTCACAGCAATGTaGCGCGGTCTGGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAFLTAM*RGLAPQ
Trigger: CTGGGGCGCCAGACCGCGCCACATTGCTGTGAGGAA...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp AAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTGTTCATGCCTAGGCTCTTaGGCAACATCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KQSGEVTAECGWPRVHFCSCLGS*ATSCCS
Trigger: GCTACAGCAAGATGTTGCCCAAGAGCCTAGGCATGA...ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGACGGCTGAATGTGGCTaGCCCAGGGTTCACTTCTGT +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKTAECG*PRVHFC
Trigger: ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGT...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAACAGCTGGTTTGGCTACACACCTTACTGGTGAGATTAGTGCCATTCCCCTGTTCATGTCCTCTTACCTaGCTGGCAGGCTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: EQLVWLHTLLVRLVPFPCSCPLT*LAGSCW
Trigger: CCAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGA...ACAGGGGAATGGCACTAATCTCACCAGTAAGGTGTGTAGCCAAACCAGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTAGGGAACAGCTGGTTTaGCTACACACCTTACTGGTG +
Preference number: 4 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEAREQLV*LHTLLV
Trigger: CACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCT...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp AAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTGTCTTTCTCCACCACAGTaGCAAATGACTCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: KQSGEVTAECGWPRVHFCLSPPQ*QMTPCS
Trigger: AGAACAGGGAGTCATTTGTCACTGTGGTGGAGAAAG...ACAGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCTGGGGAAGTTACGGCTaGATGTGGCTGGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAWGSYG*MWLAQG
Trigger: ACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCA...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTACCTCGCCCTTCAGCTaGCAAAGGCAACCAATGTTA +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPTSPFS*QRQPML
Trigger: TAACATTGGTTGCCTTTGGCAGCTGAAGGGCGAGGT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR GCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGAGCTCCATTCTTTCCTaGTTGGAGGCCGTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKSSILS*LEAVGS
Trigger: GCTTCCTACGGCCTCCAAGCAGGAAAGAATGGAGCT...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTAGGGTGCTTTCTTCTTaGCTTCCGGCTCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSRVLSS*LPARCG
Trigger: CCCGCACCGAGCCGGAAGCCAAGAAGAAAGCACCCT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427197.2
CDS-3UTR CCA 90 bp TTGGCACACTGCACCTGTAGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGCAGCCTTAAACTCCTaGACTCAAGTGATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LAHCTCRNSLGKLRLNVAAALNS*TQVIWP
Trigger: TGGCCAGATCACTTGAGTCCAGGAGTTTAAGGCTGC...AGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCTACAGGTGCAGTGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
3UTR CAA 72 bp ATTCAGATGACTGTGTATAGCTCCATTCTTTCCTGCTaGGAGGCCGTAGGAAGCCAGCTCATGCCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: IQMTVYSSILSC*EAVGSQLMPRL
Trigger: GAGCCTAGGCATGAGCTGGCTTCCTACGGCCTCCAAGCAGGAAAGAATGGAGCTATACACAGTCATCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAGGAAGTCCGTAAGGTaGGTCAGGGTGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQARKSVR*VRVTAQ
Trigger: CTGGGCTGTCACCCTGACTCACCTTACGGACTTCCT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCTATTCCCTTCAATCATaGAGATGTGGGAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVYSLQS*RCGNLS
Trigger: ACTTAAATTCCCACATCTCCATGATTGAAGGGAATA...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGGTCAGGCAGACCTCATaGCCCAACCTCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKVRQTS*PNLIIY
Trigger: GTAAATGATGAGGTTGGGCCATGAGGTCTGCCTGAC...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTTTAACAGGGAACAGCTaGTTTGGCTACACACCTTAC +
Preference number: 4 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEALTGNS*FGYTPY
Trigger: GTAAGGTGTGTAGCCAAACCAGCTGTTCCCTGTTAA...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGTCCCTTAAGGTGGCCTaGATAGCTTTCTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTSLKVA*IAFFHP
Trigger: GGGATGGAAGAAAGCTATTCAGGCCACCTTAAGGGA...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TTGGCACACTGCACCTGTAGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTATTATGGAGGCAGCATaGAGTATTGGAAAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LAHCTCRNSLGKLRLNVAIMEAA*SIGKGK
Trigger: CTTGCCCTTTCCAATACTTCATGCTGCCTCCATAAT...AGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCTACAGGTGCAGTGTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAAAGTCCAGGACAGGGTaGTTTCTTCTTGGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKKSRTG*FLLGFR
Trigger: CCGGAAGCCAAGAAGAAAGCACCCTGTCCTGGACTT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427197.2
CDS-3UTR GCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATTCACCCAGGCTGGAGTaGAGTGGCGCGATCGTAGCT +
Preference number: 4 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHSPRLE*SGAIVA
Trigger: AGCTACGATCGCGCCACTGCACTCCAGCCTGGGTGA...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR GCA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGTCTTGGGCAACATCTTaGTGTAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FRLRVSRIVESGAQACSWSWATS*CSPRKL
Trigger: CAGTTTGCGTGGGCTACAGCAAGATGTTGCCCAAGA...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp GGTAAAACTCCAAGGCAATTCATGTCCTCTTACCTGGCTGGCAGGCTCATGCTGCATACATGTAGTCACTaGACCAGGGTCAGGATCATT +
Preference number: 4 (lower is better)
Translates to: GKTPRQFMSSYLAGRLMLHTCSH*TRVRII
Trigger: AATGATCCTGACCCTGGTGCAGTGACTACATGTATG...CAGCATGAGCCTGCCAGCCAGGTAAGAGGACATGAATTGCCTTGGAGTTTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494992.5
CDS-3UTR CCA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGGTCAGGCAGACCTCATaGCCCAACCTCATCATTTAC +
Preference number: 4 (lower is better)
Translates to: FRLRVSRIVESGAQACSWVRQTS*PNLIIY
Trigger: GTAAATGATGAGGTTGGGCCATGAGGTCTGCCTGAC...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGGATTTGAGCTTGAAGTaGGCAGCTTTAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKDLSLK*AALGLG
Trigger: CCCTAAGCCTAAAGCTGCCCACTTCAAGCTCAAATC...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp ATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATTTTACAGTTCAGGGAACAGCTGGTTTaGCTACACACCTTACTGGTG +
Preference number: 4 (lower is better)
Translates to: MPSCPYLLKDLPEAILQFREQLV*LHTLLV
Trigger: CACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCT...GAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
3UTR CAA 72 bp GAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTaGGGCAGGTCTCCTCTCTATCATCCCTATCTACGA +
Preference number: 4 (lower is better)
Translates to: ELRKGGRPWKFN*GRSPLYHPYLR
Trigger: TCGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCAGGTGGAACAGAGATaGCTCACCTACATAGACTTC +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTQVEQR*LTYIDF
Trigger: GAAGTCTATGTAGGTGAGTCATCTCTGTTCCACCTG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCTTTCTAGGTGCCACTaGTTCTTTCACTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTLSRCH*FFHCAR
Trigger: CCTTGCACAGTGAAAGAATCAGTGGCACCTAGAAAG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAAAGTCCAGGACAGGGTaGTTTCTTCTTGGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQKSRTG*FLLGRL
Trigger: GAGCCGGCCAAGAAGAAAGCACCCTGTCCTGGACTT...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371408.7
CDS-3UTR GCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGTTCAGGATGGAAACGTaGACACTGGTCATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTFRMET*TLVMPR
Trigger: TCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAA...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CATCTGAATCAGGGCCACACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTATCTTGGGCAACATCTTaGTGTAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: HLNQGHTTLSRILEDIVLSWATS*CSPRKL
Trigger: CAGTTTGCGTGGGCTACAGCAAGATGTTGCCCAAGA...TAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGTGTGGCCCTGATTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp GGCTATTTTACAGTTCTTAACAGGGAACAGCTGGTTTGGCTACACACCTTACTGTCAGGGACAGGAACATaGATGGAGCTGTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GYFTVLNREQLVWLHTLLSGTGT*MELSSP
Trigger: AGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGA...CAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCTGTTAAGAACTGTAAAATAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVMGLFM*ASPCSP
Trigger: TGGGCTACATGGAGAAGCCCACATGAAGAGGCCCAT...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGGTGATCTGGCCACCTTaGCCTCCCGAAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EALGWDEVYSINVSVLSKVIWPP*PPEMLG
Trigger: TCCCAGCATTTCGGGAGGCCAAGGTGGCCAGATCAC...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp GTGCCATTCCCCTGTGCTTTGTTTAGGACCTTTCCTGATCCACAACCTTTAGGGTTAACAGGGAACAGCTaGTTTGGCTACACACCTTAC +
Preference number: 4 (lower is better)
Translates to: VPFPCALFRTFPDPQPLGLTGNS*FGYTPY
Trigger: GTAAGGTGTGTAGCCAAACCAGCTGTTCCCTGTTAA...CCCTAAAGGTTGTGGATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CCA 90 bp ACAGTTCTTAACAGGGAACAGCTGGTTTGGCTACACACCTTACTGGTGAGATTACACATCTTGACTGACTaGAAGGCCTTCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TVLNREQLVWLHTLLVRLHILTD*KAFRDR
Trigger: CCTGTCCCTGAAGGCCTTCCAGTCAGTCAAGATGTG...TAATCTCACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCTGTTAAGAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTCCCTTAAGGTGGCCTaGATAGCTTTCTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSSLKVA*IAFFHP
Trigger: GGGATGGAAGAAAGCTATTCAGGCCACCTTAAGGGA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGACAGATGCTTCATCTaGCACAGTAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKDRCFI*HSKSWK
Trigger: CTTCCAGCTCTTACTGTGTCAGATGAAGCATCTGTC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAACAGGTGGAACAGAGATaGCTCACCTACATAGACTTC +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKQVEQR*LTYIDF
Trigger: GAAGTCTATGTAGGTGAGTCATCTCTGTTCCACCTG...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTATACAACGGGAAATTTaGCAGTTTAGGGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPIQREI*QFRESG
Trigger: ACCTGATTCCCTAAACTGTCAAATTTCCCGTTGTAT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTAAATTTAAGTATGGTCTaGAGACTCTGGCTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVNLSMV*RLWLAG
Trigger: GCCTGCCAGCCAGAGTCTGCAGACCATACTTAAATT...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACCGCTCCAACATTACTaGCTACTACGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQPLQHY*LLRREH
Trigger: GTGCTCTCTGCGTAGTAGCCAGTAATGTTGGAGCGG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGGAAAACACTTCAGGATaGAAACGTGCACACTGGTCA +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTENTSG*KRAHWS
Trigger: TGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTC...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAATGGCGTTAGTGTCATaGTGCTGCATCATGGTATGG +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKMALVS*CCIMVW
Trigger: CCATACCATGATGCAGCACCATGACACTAACGCCAT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTAAGGGAGGAAGGCCATaGAAATTCAACTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSKGGRP*KFNLGR
Trigger: CCTGCCCAAGTTGAATTTCCATGGCCTTCCTCCCTT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAAAGGGCAAGGTCTTTaGAGTCAGGCAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAKGQGL*SQADLM
Trigger: CATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGTACCACCCTCAATTATaGAGGCAGCATGAAGTATTG +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKYHPQL*RQHEVL
Trigger: CAATACTTCATGCTGCCTCCATAATTGAGGGTGGTA...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGGGTGTTTCCTTGCATTaGCTAGGATTGTTTATGGCT +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKGVSLH*LGLFMA
Trigger: AGCCATAAACAATCCTAGCCAATGCAAGGAAACACC...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGGGGCTTGACAATATTTaGTGTTTCCTTGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKGLDNI*CFLALA
Trigger: AGCCAATGCAAGGAAACACCAAATATTGTCAAGCCC...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTGGGAAGTCACTATCTTaGTGTATCTCATCTCTACAA +
Preference number: 4 (lower is better)
Translates to: LISTMEQACQSHSPVLSPGKSLS*CISSLQ
Trigger: TTGTAGAGATGAGATACACCAAGATAGTGACTTCCC...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 72 bp ACCTTACTGGTGAGATTAGTGCCATTCCCCTGTGCTTaGTTTAGGACCTTTCCTGATCCACAACCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TLLVRLVPFPCA*FRTFPDPQPLG
Trigger: CCCTAAAGGTTGTGGATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGGCACTAATCTCACCAGTAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR TCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCTCCTCTCACCAACTTaGCCCCAACAACAACAACAA +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSLLSPT*PQQQQQ
Trigger: TTGTTGTTGTTGTTGGGGTCAAGTTGGTGAGAGGAG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATAGGAAAGCAGACATCTaGATCAGGGCCACACAACGC +
Preference number: 4 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHRKADI*IRATQR
Trigger: GCGTTGTGTGGCCCTGATTCAGATGTCTGCTTTCCT...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTCTTTCTCCACCACAGTaGCAAATGACTCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVLSPPQ*QMTPCS
Trigger: AGAACAGGGAGTCATTTGTCACTGTGGTGGAGAAAG...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp GTCATGTTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTGGCCACCTTTCTTCTaGTTGGCACACTGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VMFASSYDQCEGLTIFGVWPPFF*LAHCTC
Trigger: ACAGGTGCAGTGTGCCAATCAGAAGAAAGGTGGCCA...AACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAACATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp CAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCTAGGGACATGAAGACTTaGCTGTGTACTCATTGGGCC +
Preference number: 4 (lower is better)
Translates to: QESLKPEVHKAQDKYDTSRDMKT*LCTHWA
Trigger: GGCCCAATGAGTACACAGTCAAGTCTTCATGTCCCT...AGATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTTCAGGATGGAAACGTaGACACTGGTCATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSFRMET*TLVMPR
Trigger: TCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAGCGTTAGTGTCATGGTaGTGCATCATGGTATGGCAC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQALVSW*CIMVWH
Trigger: GTGCCATACCATGATGCAGCACCATGACACTAACGC...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGTTCGCTTCTAGCTCTTaGTCTAGGAGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLFASSS*SRRGRR
Trigger: CCTCCTTCCCCTCCTAGAGCAAGAGCTAGAAGCGAA...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGTTCGCTTCTAGCTCTTaGTCTAGGAGGGGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EALGWDEVYSINVSVLSKFASSS*SRRGRR
Trigger: CCTCCTTCCCCTCCTAGAGCAAGAGCTAGAAGCGAA...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTATGGCGTTAGTGTCATaGTGCTGCATCATGGTATGG +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSMALVS*CCIMVW
Trigger: CCATACCATGATGCAGCACCATGACACTAACGCCAT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGAAGGGAGGAAGGCCATaGAAATTCAACTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLKGGRP*KFNLGR
Trigger: CCTGCCCAAGTTGAATTTCCATGGCCTTCCTCCCTT...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGATGAGGAAAATTCGTTaGCCTTTTGGGCCTATAAAC +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTMRKIR*PFGPIN
Trigger: GTTTATAGGCCCAAAAGGTCAACGAATTTTCCTCAT...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTATACTCCCTAAGTCCTaGCTAACCTCCCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSILPKS*LTSQAF
Trigger: AAAAGCTTGGGAGGTTAGTCAGGACTTAGGGAGTAT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp GTGCTTTGGGGAGAAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACACCAATGTGAGGGCTTaGCAATATTTGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLWGEKLGSHYLGVSHLYTNVRA*QYLVFP
Trigger: AGGAAACACCAAATATTGTCAAGCCCTCACATTGGT...GTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATAGGGACATGAAGACTTaGCTGTGTACTCATTGGGCC +
Preference number: 4 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHRDMKT*LCTHWA
Trigger: GGCCCAATGAGTACACAGTCAAGTCTTCATGTCCCT...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGGGCACTTCCAATTGCTaGGAATGTTCCCTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLGTSNC*ECSLKV
Trigger: CACCTTAAGGGAACATTCGCAGCAATTGGAAGTGCC...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTACGGCACTTCCAATTaGTGCGAATGTTCCCTTAAG +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSYGTSN*CECSLK
Trigger: CTTAAGGGAACATTCGCAGCAATTGGAAGTGCCGTA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGTATTGCTACTGGCCCTaGTTTTTCTATTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTYCYWP*FFYLKC
Trigger: GCACTTCAAATAGAAAAAGCAGGGCCAGTAGCAATA...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGAGTTCCATTTCTTCTTaGTATTACAAATCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VESGAQACSWTDQGFENKSSISS*YYKSGW
Trigger: CCAGCCTGATTTGTAATAGCAAGAAGAAATGGAACT...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGGGTACCATTTACGAATaGCCGCTCCAACATTACTGG +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLGTIYE*PLQHYW
Trigger: CCAGTAATGTTGGAGCGGCCATTCGTAAATGGTACC...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAGGTACCATTTACGAATaGCCGCTCCAACATTACTGG +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQGTIYE*PLQHYW
Trigger: CCAGTAATGTTGGAGCGGCCATTCGTAAATGGTACC...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCCTATCTACGAAGCATaGCCCCTATGTGATGATTTC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSPIYEA*PLCDDF
Trigger: GAAATCATCACATAGGGGCCATGCTTCGTAGATAGG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCATGGAAATTCAACTTaGGCAGGTCTCCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSHGNST*AGLLSI
Trigger: GATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTATTCCACACCCATATATaGAAAGCTTCCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVFHTHI*KASLLF
Trigger: GAAGAGCAAGGAAGCTTTCCATATATGGGTGTGGAA...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTAGGGCTTGACAATATTTaGTGTTTCCTTGCATTGGCT +
Preference number: 4 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVGLDNI*CFLALA
Trigger: AGCCAATGCAAGGAAACACCAAATATTGTCAAGCCC...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGTCATGCCTAGGCTCTTaGGCAACATCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EALGWDEVYSINVSVLSKSCLGS*ATSCCS
Trigger: GCTACAGCAAGATGTTGCCCAAGAGCCTAGGCATGA...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGACTATTAGGGGTGCTTTaGGGAGAAAAGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRLLGVL*GEKLGS
Trigger: ACTTCCCAGCTTTTCTCCCCAAAGCACCCCTAATAG...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GTCATGTTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTGCACAGGCTTGTAGTTaGACAGACCAGGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VMFASSYDQCEGLTIFGVAQACS*TDQGFE
Trigger: CTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGC...AACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 72 bp GACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTaGCATTGGCTAGGATTGTTTATGGCTACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: DQCEGLTIFGVS*HWLGLFMATAQ
Trigger: TTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 72 bp CAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTaGAGAATAAGACTCTTGACACTTATTAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: QEHRLVVGQTRV*RIRLLTLISYV
Trigger: CACATAGCTAATAAGTGTCAAGAGTCTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCAATGCAGGAAACTATaGAAGTCAATCAAACATGGA +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTQCRKL*KSIKHG
Trigger: TCCATGTTTGATTGACTTTCATAGTTTCCTGCATTG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp GTGCTTTGGGGAGAAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAGCTCTTGGCTGGGATaGGGTTTATTCAATAAATGT +
Preference number: 4 (lower is better)
Translates to: VLWGEKLGSHYLGVSHLYSSWLG*GLFNKC
Trigger: ACATTTATTGAATAAACCTCATCCCAGCCAAGAGCT...GTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGAGGTACTCAATCTTTTaGTTCTCTTCTGCACTTATG +
Preference number: 4 (lower is better)
Translates to: FRLRVSRIVESGAQACSWRYSIF*FSSALM
Trigger: CATAAGTGCAGAAGAGAATCAAAAGATTGAGTACCT...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAACATTGTCTTCATTATTaGTACTGGCCCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKHCLHY*YWPCFF
Trigger: GAAAAAGCAGGGCCAGTAGCAATAATGAAGACAATG...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAAGAGCTGGAAGCTATTaGAACCTCACCAATAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQRAGSY*NLTNKG
Trigger: CCCTTTATTGGTGAGGTTGCAATAGCTTCCAGCTCT...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCCCAATGCACACATGCTaGAAAGTACCAAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAPMHTC*KVPKTS
Trigger: AGAAGTCTTTGGTACTTTGCAGCATGTGTGCATTGG...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR GCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTAATGACTCCCTGTTCTaGATTCTACCACCCTCAATT +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVNDSLF*ILPPSI
Trigger: AATTGAGGGTGGTAGAATGCAGAACAGGGAGTCATT...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCCCGCTCCAACATTACTaGCTACTACGCAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILPLQHY*LLRREH
Trigger: GTGCTCTCTGCGTAGTAGCCAGTAATGTTGGAGCGG...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACCTATCTACGAAGCATaGCCCCTATGTGATGATTTC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQPIYEA*PLCDDF
Trigger: GAAATCATCACATAGGGGCCATGCTTCGTAGATAGG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCATGGAAATTCAACTTaGGCAGGTCTCCTCTCTATC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLHGNST*AGLLSI
Trigger: GATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTATCTTGCATATCCTCCTaGAATATTCTGTTTACCCTC +
Preference number: 4 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVSCISS*NILFTL
Trigger: GAGGGTAAACAGAATATTCCAGGAGGATATGCAAGA...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATAAAGGGCAAGGTCTTTaGAGTCAGGCAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINKGQGL*SQADLM
Trigger: CATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTT...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGACACCTTTCTTCTGATTaGCACACTGCACCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRHLSSD*HTAPVE
Trigger: TTCTACAGGTGCAGTGTGCCAATCAGAAGAAAGGTG...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAACAGCTGGTTTGGCTACACACCTTACTGGTGAGATTAGTGCCATTCCCCTGTTTCGATGACCAATTATaGCACATATATGACCCTTTT +
Preference number: 4 (lower is better)
Translates to: EQLVWLHTLLVRLVPFPCFDDQL*HIYDPF
Trigger: AAAAGGGTCATATATGTGCCATAATTGGTCATCGAA...ACAGGGGAATGGCACTAATCTCACCAGTAAGGTGTGTAGCCAAACCAGCTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494992.5
CDS-3UTR TCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTATGAGGAAAATTCGTTaGCCTTTTGGGCCTATAAAC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSMRKIR*PFGPIN
Trigger: GTTTATAGGCCCAAAAGGTCAACGAATTTTCCTCAT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAGTAAAACGTGCTGTTTaGATTCATGGCGTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQVKRAV*IHGVSV
Trigger: GACACTAACGCCATGAATTCAAACAGCACGTTTTAC...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGGTAAAACGTGCTGTTTaGATTCATGGCGTTAGTGTC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLVKRAV*IHGVSV
Trigger: GACACTAACGCCATGAATTCAAACAGCACGTTTTAC...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTGTAGCCCACGCAAACTaGTTATATAGTCCATATATG +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVVAHAN*LYSPYM
Trigger: CATATATGGACTATATAATCAGTTTGCGTGGGCTAC...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCGTAGCCCACGCAAACTaGTTATATAGTCCATATATG +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAVAHAN*LYSPYM
Trigger: CATATATGGACTATATAATCAGTTTGCGTGGGCTAC...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp CATCTGAATCAGGGCCACACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTAAGGTACTCAATCTTTTaGTTCTCTTCTGCACTTATG +
Preference number: 4 (lower is better)
Translates to: HLNQGHTTLSRILEDIVLRYSIF*FSSALM
Trigger: CATAAGTGCAGAAGAGAATCAAAAGATTGAGTACCT...TAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGTGTGGCCCTGATTCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTATACAACGGGAAATTTaGCAGTTTAGGGAATCAGGT +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVIQREI*QFRESG
Trigger: ACCTGATTCCCTAAACTGTCAAATTTCCCGTTGTAT...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTATTGCTACTGGCCCTaGTTTTTCTATTTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSYCYWP*FFYLKC
Trigger: GCACTTCAAATAGAAAAAGCAGGGCCAGTAGCAATA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCGCGTTAGTGTCATGGTaGTGCATCATGGTATGGCAC +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILALVSW*CIMVWH
Trigger: GTGCCATACCATGATGCAGCACCATGACACTAACGC...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGATAACCTTTCAACTCTaGAGGCTTAAGATAATGACA +
Preference number: 4 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTITFQL*RLKIMT
Trigger: TGTCATTATCTTAAGCCTGCAGAGTTGAAAGGTTAT...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTAAATCTGATAGATGGTaGCAAATTGCCCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TPFNLFELQFPISLSPKVKSDRW*QIALPR
Trigger: TCTAGGAAGGGCAATTTGGCACCATCTATCAGATTT...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAATAACAACTAGCATTTaGAACACACATCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKITTSI*NTHRNA
Trigger: TGCGTTTCGATGTGTGTTCCAAATGCTAGTTGTTAT...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTACCAAACAAAAATGGTaGTCTCACGATAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSTKQKW*SHDKDH
Trigger: GTGATCCTTATCGTGAGACCACCATTTTTGTTTGGT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTGGAACCAAACAAAAATaGTGGTCTCACGATAAGGAT +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSGTKQK*WSHDKD
Trigger: ATCCTTATCGTGAGACCACCATTTTTGTTTGGTTCC...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGCACCTTTCTTCTGATTaGCACACTGCACCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLHLSSD*HTAPVE
Trigger: TTCTACAGGTGCAGTGTGCCAATCAGAAGAAAGGTG...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGTTTGGGGAGAAAAGCTaGGAAGTCACTATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLFGEKS*EVTILV
Trigger: CACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAA...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGTTTGGGGAGAAAAGCTaGGAAGTCACTATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: EALGWDEVYSINVSVLSKFGEKS*EVTILV
Trigger: CACCAAGATAGTGACTTCCCAGCTTTTCTCCCCAAA...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp ACTGAAATATATGCAGTGTTGTCATCACCTTCTATTCTTTCGCTTCTAGCTCTTGCACAGGCTTGTAGTTaGACAGACCAGGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: TEIYAVLSSPSILSLLALAQACS*TDQGFE
Trigger: CTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGC...AAGAGCTAGAAGCGAAAGAATAGAAGGTGATGACAACACTGCATATATTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATGATTTGAGCTTGAAGTaGGCAGCTTTAGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINDLSLK*AALGLG
Trigger: CCCTAAGCCTAAAGCTGCCCACTTCAAGCTCAAATC...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATTTTTCTTCAAACAATaGGCTCTCCTCTCACCAACT +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQFFFKQ*ALLSPT
Trigger: AGTTGGTGAGAGGAGAGCTCATTGTTTGAAGAAAAA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCGACAGATGCTTCATCTaGCACAGTAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILDRCFI*HSKSWK
Trigger: CTTCCAGCTCTTACTGTGTCAGATGAAGCATCTGTC...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCCTTTCTAGGTGCCACTaGTTCTTTCACTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILLSRCH*FFHCAR
Trigger: CCTTGCACAGTGAAAGAATCAGTGGCACCTAGAAAG...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR TCA 90 bp CAAATTGCCCTTCCTAGAAGTTGTACCAATGCACACATGCTGCAAAGTACCAAAAAGAACAAGGAGTGCTaGTTTTGTAATGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QIALPRSCTNAHMLQSTKKNKEC*FCNAVF
Trigger: GAACACTGCATTACAAAATCAGCACTCCTTGTTCTT...TTTGGTACTTTGCAGCATGTGTGCATTGGTACAACTTCTAGGAAGGGCAATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR TCA 90 bp CAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCTAAGAACAAGGAGTGCTaGTTTTGTAATGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QESLKPEVHKAQDKYDTSKNKEC*FCNAVF
Trigger: GAACACTGCATTACAAAATCAGCACTCCTTGTTCTT...AGATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCGGCACTTCCAATTGCTaGGAATGTTCCCTTAAGGTG +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILGTSNC*ECSLKV
Trigger: CACCTTAAGGGAACATTCGCAGCAATTGGAAGTGCC...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCTACATAATACCAAATaGTCAGAAAGTAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSLHNTK*SESSPQ
Trigger: CTGTGGACTACTTTCTGAGCATTTGGTATTATGTAG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR GCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCATTGTCTTCATTATTaGTACTGGCCCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLHCLHY*YWPCFF
Trigger: GAAAAAGCAGGGCCAGTAGCAATAATGAAGACAATG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGTATGGACGTAAACACTaGACTGCTAAACGTGATAAC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLYGRKH*TAKRDN
Trigger: GTTATCACGTTTAGCAGTCCAGTGTTTACGTCCATA...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAATATGGACGTAAACACTaGACTGCTAAACGTGATAAC +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQYGRKH*TAKRDN
Trigger: GTTATCACGTTTAGCAGTCCAGTGTTTACGTCCATA...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGACCAAACAAAAATGGTaGTCTCACGATAAGGATCAC +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLTKQKW*SHDKDH
Trigger: GTGATCCTTATCGTGAGACCACCATTTTTGTTTGGT...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGGGAACCAAACAAAAATaGTGGTCTCACGATAAGGAT +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLGTKQK*WSHDKD
Trigger: ATCCTTATCGTGAGACCACCATTTTTGTTTGGTTCC...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGCTAACTGCAAAGTATTaGTCTGATGAAGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLLTAKY*SDEVPG
Trigger: ACCTGGAACTTCATCAGACCAATACTTTGCAGTTAG...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCCCCATTGGAACTATTaGAAAAGATTCTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSPHWNY*KRFFLT
Trigger: AGTGAGAAAGAATCTTTTCCAATAGTTCCAATGGGG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGTACCACCCTCAATTATaGAGGCAGCATGAAGTATTG +
Preference number: 4 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLYHPQL*RQHEVL
Trigger: CAATACTTCATGCTGCCTCCATAATTGAGGGTGGTA...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATGGTGTTTCCTTGCATTaGCTAGGATTGTTTATGGCT +
Preference number: 4 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHGVSLH*LGLFMA
Trigger: AGCCATAAACAATCCTAGCCAATGCAAGGAAACACC...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR TCA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGAGCTCTTGGCTGGGATaGGGTTTATTCAATAAATGT +
Preference number: 4 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLSSWLG*GLFNKC
Trigger: ACATTTATTGAATAAACCTCATCCCAGCCAAGAGCT...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR GCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAATTTAAGTATGGTCTaGAGACTCTATGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQANLSMV*RLYEAK
Trigger: TTTTGCCTCATAGAGTCTGCAGACCATACTTAAATT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR GCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATAATGACTCCCTGTTCTaGATTCTACCACCCTCAATT +
Preference number: 4 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINNDSLF*ILPPSI
Trigger: AATTGAGGGTGGTAGAATGCAGAACAGGGAGTCATT...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGATAACAACTAGCATTTaGAACACACATCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLITTSI*NTHRNA
Trigger: TGCGTTTCGATGTGTGTTCCAAATGCTAGTTGTTAT...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTTCCTTGTATACACCTTaGACATTGTGTTTAAGAATC +
Preference number: 4 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSSLYTP*TLCLRI
Trigger: GATTCTTAAACACAATGTCCAAGGTGTATACAAGGA...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCTATTCCCTTCAATCATaGAGATGTGGGAATTTAAGT +
Preference number: 4 (lower is better)
Translates to: KSWEVTILVYLISTMEQAYSLQS*RCGNLS
Trigger: ACTTAAATTCCCACATCTCCATGATTGAAGGGAATA...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CCA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGGGGAAGTCACTATCTTaGTGTATCTCATCTCTACAA +
Preference number: 4 (lower is better)
Translates to: EALGWDEVYSINVSVLSKGKSLS*CISSLQ
Trigger: TTGTAGAGATGAGATACACCAAGATAGTGACTTCCC...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
3UTR CAA 72 bp TGGGTATATACCATGACTTACTTAACCAGTACTCTATaGAGGGACATTCAGGCTAGTTCCATTTCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: WVYTMTYLTSTL*RDIQASSISSC
Trigger: GCAAGAAGAAATGGAACTAGCCTGAATGTCCCTCAATAGAGTACTGGTTAAGTAAGTCATGGTATATACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR GCA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAAATAACCTTTCAACTCTaGAGGCTTAAGATAATGACA +
Preference number: 4 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQITFQL*RLKIMT
Trigger: TGTCATTATCTTAAGCCTGCAGAGTTGAAAGGTTAT...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATAGTAAATCTGATAGATaGTGCCAAATTGCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINSKSDR*CQIALP
Trigger: AGGAAGGGCAATTTGGCACCATCTATCAGATTTACT...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATAGTTATTTACCCACCTaGTTCAAAATTCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHSYLPT*FKIQKV
Trigger: CACCTTTTGAATTTTGAACCAGGTGGGTAAATAACT...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCAGTTCCTCTTTGCTTTaGAAAAATTATGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILSSSLL*KNYDER
Trigger: CCTCTCATCATAATTTTTCCAAAGCAAAGAGGAACT...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CCA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCTCCTTGTATACACCTTaGACATTGTGTTTAAGAATC +
Preference number: 4 (lower is better)
Translates to: CIINTIKQAPILSFNFILSLYTP*TLCLRI
Trigger: GATTCTTAAACACAATGTCCAAGGTGTATACAAGGA...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
3UTR CAA 72 bp TTGACAATATTTGGTGTTTCCTTGCATTGGCTAGGATaGTTTATGGCTACTGCCCAACAAATGTTAATTAGT +
Preference number: 4 (lower is better)
Translates to: LTIFGVSLHWLG*FMATAQQMLIS
Trigger: ACTAATTAACATTTGTTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAAGGAAACACCAAATATTGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS CCA 90 bp GGAGCAACACGGCGAGGAAAGGCAGAGCCAGCACCTACCGCGGTCTaGCGCCCCAGCTGCCTCGGCGGCCGCCGGCTCCTCAGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: GATRRGKAEPAPTAV*RPSCLGGRRLLSGA
Trigger: GGCGCCACTGAGGAGCCGGCGGCCGCCGAGGCAGCTGGGGCGCCAGACCGCGGTAGGTGCTGGCTCTGCCTTTCCTCGCCGTGTTGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371408.7
ENST00000427197.2
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS CCA 90 bp CTTCTCCATGTAGCCCAGGCTTCCTCACAGCAATGTGGCGCGGTCTaGCGCCCCAGCTGCCTCGGCGGCCGCCGGCTCCTCAGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: LLHVAQASSQQCGAV*RPSCLGGRRLLSGA
Trigger: GGCGCCACTGAGGAGCCGGCGGCCGCCGAGGCAGCTGGGGCGCCAGACCGCGCCACATTGCTGTGAGGAAGCCTGGGCTACATGGAGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS GCA 90 bp TCTCCATGTAGCCCAGGCTTCCTCACAGCAATGTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGGAAAGGCAGAGCCAGCACCTACCGC +
Preference number: 5 (lower is better)
Translates to: SPCSPGFLTAMWPAR*GSNTARKGRASTYR
Trigger: GCGGTAGGTGCTGGCTCTGCCTTTCCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAAGCCTGGGCTACATGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS CCA 90 bp TTCATGTGGGCTTCTCCATGTAGCCCAGGCTTCCTCACAGCAATGTaGCCGGCTCGGTGCGGGAGCAACACGGCGAGGAAAGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FMWASPCSPGFLTAM*PARCGSNTARKGRA
Trigger: GGCTCTGCCTTTCCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAAGCCTGGGCTACATGGAGAAGCCCACATGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS-3UTR CAA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGCAGCATGAAGTATaGGAAAGGGCAAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVRQHEV*ERARSL
Trigger: CAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCT...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp GGCTGGCAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCCCCCATTCAACCTCTTaGAACTTCAGTTCCCAATCA +
Preference number: 5 (lower is better)
Translates to: GWQAHAGYQLVVQMGPSVPHSTS*NFSSQS
Trigger: TGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGG...GACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTGCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp ACTGGAAGGCCTTCAGGGACAGGAACATGCATGGAGCTGTCGTCTCCTGTGATACAGGGAACAGCTGGTTaGGCTACACACCTTACTGGT +
Preference number: 5 (lower is better)
Translates to: TGRPSGTGTCMELSSPVIQGTAG*ATHLTG
Trigger: ACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCTG...TATCACAGGAGACGACAGCTCCATGCATGTTCCTGTCCCTGAAGGCCTTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CAA 90 bp AGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTGGCCCAGGGTTCACTTCTCAAGAGGATTTGAGCTaGAAGTGGGCAGCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: RNSLGKLRLNVAGPGFTSQEDLS*KWAALG
Trigger: GCCTAAAGCTGCCCACTTCAAGCTCAAATCCTCTTG...AGAAGTGAACCCTGGGCCAGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS CCA 90 bp ATTTGGAACTTTGGTACCATTTACGAATGGCCGCTCCAACATTACTaGCTACTACGCAGAGAGCACCACCCACTGTCCACCACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: IWNFGTIYEWPLQHY*LLRREHHPLSTTLA
Trigger: TGCCAACGTGGTGGACAGTGGGTGGTGCTCTCTGCGTAGTAGCCAGTAATGTTGGAGCGGCCATTCGTAAATGGTACCAAAGTTCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACAGGGTGCTTTCTTCTaGGCTTCCGGCTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQQGAFF*ASGSVR
Trigger: CCGCACCGAGCCGGAAGCCAAGAAGAAAGCACCCTG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427197.2
CDS-3UTR CAA 90 bp CAGGCTCATGCTGGCTATCAGCTGGTAGTGCAGATGGGGCCAAGTGTCAGGGCCCCATATATGTCATGTTaGCTTCCAGTTATGACCAAT +
Preference number: 5 (lower is better)
Translates to: QAHAGYQLVVQMGPSVRAPYMSC*LPVMTN
Trigger: ATTGGTCATAACTGGAAGCAAACATGACATATATGG...GGCCCTGACACTTGGCCCCATCTGCACTACCAGCTGATAGCCAGCATGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTCAGGGACATGAAGACTaGACTGTGTACTCATTGGGC +
Preference number: 5 (lower is better)
Translates to: LISTMEQACQSHSPVLSPQGHED*TVYSLG
Trigger: GCCCAATGAGTACACAGTCAAGTCTTCATGTCCCTG...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp CCTGTGATAGCAATGCCTTCTTGTCCATACCTCCTGAAGGACCTGCCTGAGGCTCCATTCCCCTGTGCTTaGTTTAGGACCTTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: PVIAMPSCPYLLKDLPEAPFPCA*FRTFPD
Trigger: ATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGG...AGCCTCAGGCAGGTCCTTCAGGAGGTATGGACAAGAAGGCATTGCTATCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CAA 90 bp TTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGTGGTGTTTCCTTGCATaGGCTAGGATTGTTTATGGC +
Preference number: 5 (lower is better)
Translates to: FKYGLQTLAGRLMLAISWWCFLA*ARIVYG
Trigger: GCCATAAACAATCCTAGCCAATGCAAGGAAACACCA...CCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CAA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTATCCATTCTTTCCTGCTaGGAGGCCGTAGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVSILSC*EAVGSQ
Trigger: CTGGCTTCCTACGGCCTCCAAGCAGGAAAGAATGGA...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCCAGGGTGCTTTCTTCTaGGCCGGCTCGGTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CIINTIKQAPILSFNFILQGAFF*AGSVRE
Trigger: CTCCCGCACCGAGCCGGCCAAGAAGAAAGCACCCTG...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371408.7
CDS-3UTR CAA 90 bp ATGACTCCCTGTTCTGCATTCTACCACCCTCAATTATGGAGGCAGCATGAAGTAGAAAGGGCAAGGTCTTaGGAGTCAGGCAGACCTCAT +
Preference number: 5 (lower is better)
Translates to: MTPCSAFYHPQLWRQHEVERARS*ESGRPH
Trigger: ATGAGGTCTGCCTGACTCCAAAGACCTTGCCCTTTC...TACTTCATGCTGCCTCCATAATTGAGGGTGGTAGAATGCAGAACAGGGAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTTAAGTATGGTCTGCAGACTCTGGCTGGCAGGCTCATGCTGGCTATCAGCTGGTGGGAAGTCACTATCTaGGTGTATCTCATCTCTACA +
Preference number: 5 (lower is better)
Translates to: FKYGLQTLAGRLMLAISWWEVTI*VYLIST
Trigger: TGTAGAGATGAGATACACCAAGATAGTGACTTCCCA...CCAGCTGATAGCCAGCATGAGCCTGCCAGCCAGAGTCTGCAGACCATACTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603665.1
CDS-3UTR CAA 90 bp TTTAGGCTTAGGGTAAGCAGAATAGTGGAGTCAGGAGCACAGGCTTGTAGTTGGCAAGAGGATTTGAGCTaGAAGTGGGCAGCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: FRLRVSRIVESGAQACSWQEDLS*KWAALG
Trigger: GCCTAAAGCTGCCCACTTCAAGCTCAAATCCTCTTG...CCAACTACAAGCCTGTGCTCCTGACTCCACTATTCTGCTTACCCTAAGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGAAGTGTGTTCATCTGTaGTATCTCGTACTGTCACCC +
Preference number: 5 (lower is better)
Translates to: VESGAQACSWTDQGFENKKCVHL*YLVLSP
Trigger: GGGTGACAGTACGAGATACAACAGATGAACACACTT...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CAA 90 bp GTGGAGTCAGGAGCACAGGCTTGTAGTTGGACAGACCAGGGTTTTGAGAATAAGGACCAATGTGAGGGCTaGACAATATTTGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: VESGAQACSWTDQGFENKDQCEG*TIFGVS
Trigger: GGAAACACCAAATATTGTCAAGCCCTCACATTGGTC...CTTATTCTCAAAACCCTGGTCTGTCCAACTACAAGCCTGTGCTCCTGACTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGATCCATTCTTTCCTGCTaGGAGGCCGTAGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRSILSC*EAVGSQ
Trigger: CTGGCTTCCTACGGCCTCCAAGCAGGAAAGAATGGA...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TGTCCATACCTCCTGAAGGACCTGCCTGAGGCTATTTTACAGTTCTTAACAGGGCCATTCCCCTGTGCTTaGTTTAGGACCTTTCCTGAT +
Preference number: 5 (lower is better)
Translates to: CPYLLKDLPEAILQFLTGPFPCA*FRTFPD
Trigger: ATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGG...CCCTGTTAAGAACTGTAAAATAGCCTCAGGCAGGTCCTTCAGGAGGTATGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CAA 90 bp TTACTGGTGAGATTAGTGCCATTCCCCTGTGCTTTGTTTAGGACCTTTCCTGATCAGGGAACAGCTGGTTaGGCTACACACCTTACTGGT +
Preference number: 5 (lower is better)
Translates to: LLVRLVPFPCALFRTFPDQGTAG*ATHLTG
Trigger: ACCAGTAAGGTGTGTAGCCAAACCAGCTGTTCCCTG...ATCAGGAAAGGTCCTAAACAAAGCACAGGGGAATGGCACTAATCTCACCAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494992.5
ENST00000605679.5
CDS-3UTR CAA 90 bp CTCATCTCTACAATGGAGCAAGCCTGCCAGAGTCACTCTCCTGTCCTTTCTCCTACGCTTTCTAGGATCTaGGAGGATATAGTCCTATTA +
Preference number: 5 (lower is better)
Translates to: LISTMEQACQSHSPVLSPTLSRI*EDIVLL
Trigger: TAATAGGACTATATCCTCCAAGATCCTAGAAAGCGT...AGGAGAAAGGACAGGAGAGTGACTCTGGCAGGCTTGCTCCATTGTAGAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTGGCACACTGCACCTGTAGAAACAGTCTGGGGAAGTTACGGCTGAATGTGGCTAAGATTAAGAAGCTCTaGGCTGGGATGAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: LAHCTCRNSLGKLRLNVAKIKKL*AGMRFI
Trigger: AATAAACCTCATCCCAGCCAAGAGCTTCTTAATCTT...AGCCACATTCAGCCGTAACTTCCCCAGACTGTTTCTACAGGTGCAGTGTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS TCA 90 bp AAATACGGCACTTCCAATTGCTGCGAATGTTCCCTTAAGGTGGCCTaGATAGCTTTCTTCCATCCCCGAAGTGTCGGAACCAAACAAAAA +
Preference number: 5 (lower is better)
Translates to: KYGTSNCCECSLKVA*IAFFHPRSVGTKQK
Trigger: TTTTTGTTTGGTTCCGACACTTCGGGGATGGAAGAAAGCTATTCAGGCCACCTTAAGGGAACATTCGCAGCAATTGGAAGTGCCGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 90 bp ATAGCTTTCTTCCATCCCCGAAGTGTCGGAACCAAACAAAAATGGTaGTCTCACGATAAGGATCACTCCAGTGATTGTGAACACGGTGAA +
Preference number: 5 (lower is better)
Translates to: IAFFHPRSVGTKQKW*SHDKDHSSDCEHGE
Trigger: TTCACCGTGTTCACAATCACTGGAGTGATCCTTATCGTGAGACCACCATTTTTGTTTGGTTCCGACACTTCGGGGATGGAAGAAAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCCATGGAAATTCAACTaGGGCAGGTCTCCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSPWKFN*GRSPLY
Trigger: ATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAGGCAGCATGAAGTATaGGAAAGGGCAAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: KSWEVTILVYLISTMEQARQHEV*ERARSL
Trigger: CAAAGACCTTGCCCTTTCCAATACTTCATGCTGCCT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp CATCTGAATCAGGGCCACACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTATTGCATTGGCTAGGATaGTTTATGGCTACTGCCCAA +
Preference number: 5 (lower is better)
Translates to: HLNQGHTTLSRILEDIVLLHWLG*FMATAQ
Trigger: TTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAA...TAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGTGTGGCCCTGATTCAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGCAAAGACCACATCCATaGTCTTCATTATTGCTACTG +
Preference number: 5 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTQRPHP*SSLLLL
Trigger: CAGTAGCAATAATGAAGACAATGGATGTGGTCTTTG...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAACCCCCATTGGAACTATaGGAAAAGATTCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKPPLEL*EKILSH
Trigger: GTGAGAAAGAATCTTTTCCAATAGTTCCAATGGGGG...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAACAGGTGTCAAGGCAATaGATAAAATCAGCAAGCCAA +
Preference number: 5 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKQVSRQ*IKSASQ
Trigger: TTGGCTTGCTGATTTTATCAATTGCCTTGACACCTG...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACCATGGAAATTCAACTaGGGCAGGTCTCCTCTCTAT +
Preference number: 5 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQPWKFN*GRSPLY
Trigger: ATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGTATACACCTTGGACATaGTGTTTAAGAATCACACCC +
Preference number: 5 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTYTPWT*CLRITP
Trigger: GGGTGTGATTCTTAAACACAATGTCCAAGGTGTATA...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCCCCCATTCAACCTCTTaGAACTTCAGTTCCCAATCA +
Preference number: 5 (lower is better)
Translates to: KSWEVTILVYLISTMEQAPHSTS*NFSSQS
Trigger: TGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGG...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp ACCCCATTCAACCTCTTTGAACTTCAGTTCCCAATCAGTCTATCTCCCAAGGTTGACCAATGTGAGGGCTaGACAATATTTGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TPFNLFELQFPISLSPKVDQCEG*TIFGVS
Trigger: GGAAACACCAAATATTGTCAAGCCCTCACATTGGTC...AACCTTGGGAGATAGACTGATTGGGAACTGAAGTTCAAAGAGGTTGAATGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp GTCATGTTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTCAGGGACATGAAGACTaGACTGTGTACTCATTGGGC +
Preference number: 5 (lower is better)
Translates to: VMFASSYDQCEGLTIFGVQGHED*TVYSLG
Trigger: GCCCAATGAGTACACAGTCAAGTCTTCATGTCCCTG...AACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAACATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGAATGAGGAAAATTCGTaGACCTTTTGGGCCTATAAA +
Preference number: 5 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTNEENS*TFWAYK
Trigger: TTTATAGGCCCAAAAGGTCAACGAATTTTCCTCATT...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AAGGCCATGGAAATTCAACTTGGGCAGGTCTCCTCTCTATCATCCCTATCTACGGCAATGATGCTTCATTaGGAACTTTGGTACCATTTA +
Preference number: 5 (lower is better)
Translates to: KAMEIQLGQVSSLSSLSTAMMLH*ELWYHL
Trigger: TAAATGGTACCAAAGTTCCAAATGAAGCATCATTGC...CGTAGATAGGGATGATAGAGAGGAGACCTGCCCAAGTTGAATTTCCATGGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTCCCCCATTGGAACTATaGGAAAAGATTCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSPPLEL*EKILSH
Trigger: GTGAGAAAGAATCTTTTCCAATAGTTCCAATGGGGG...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp CAAATTGCCCTTCCTAGAAGTTGTACCAATGCACACATGCTGCAAAGTACCAAATGGTGTTTCCTTGCATaGGCTAGGATTGTTTATGGC +
Preference number: 5 (lower is better)
Translates to: QIALPRSCTNAHMLQSTKWCFLA*ARIVYG
Trigger: GCCATAAACAATCCTAGCCAATGCAAGGAAACACCA...TTTGGTACTTTGCAGCATGTGTGCATTGGTACAACTTCTAGGAAGGGCAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS-3UTR CAA 90 bp TCTTTCTCACTAAGGCACGAACCCCAGAAGCCAAGTTCCTCTTTGCTTTGGAAAGCAATGATGCTTCATTaGGAACTTTGGTACCATTTA +
Preference number: 5 (lower is better)
Translates to: SFSLRHEPQKPSSSLLWKAMMLH*ELWYHL
Trigger: TAAATGGTACCAAAGTTCCAAATGAAGCATCATTGC...TTTCCAAAGCAAAGAGGAACTTGGCTTCTGGGGTTCGTGCCTTAGTGAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp CTGTCCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACAGGTGTCAAGGCAATaGATAAAATCAGCAAGCCAA +
Preference number: 5 (lower is better)
Translates to: LSILYHGTKEGRKAMEIQQVSRQ*IKSASQ
Trigger: TTGGCTTGCTGATTTTATCAATTGCCTTGACACCTG...TTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp AAAAGCTGGGAAGTCACTATCTTGGTGTATCTCATCTCTACAATGGAGCAAGCCAAGATTAAGAAGCTCTaGGCTGGGATGAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: KSWEVTILVYLISTMEQAKIKKL*AGMRFI
Trigger: AATAAACCTCATCCCAGCCAAGAGCTTCTTAATCTT...GGCTTGCTCCATTGTAGAGATGAGATACACCAAGATAGTGACTTCCCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGTTGCATTGGCTAGGATaGTTTATGGCTACTGCCCAA +
Preference number: 5 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLLHWLG*FMATAQ
Trigger: TTGGGCAGTAGCCATAAACAATCCTAGCCAATGCAA...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp CATCTGAATCAGGGCCACACAACGCTTTCTAGGATCTTGGAGGATATAGTCCTACCATATATGTCATGTTaGCTTCCAGTTATGACCAAT +
Preference number: 5 (lower is better)
Translates to: HLNQGHTTLSRILEDIVLPYMSC*LPVMTN
Trigger: ATTGGTCATAACTGGAAGCAAACATGACATATATGG...TAGGACTATATCCTCCAAGATCCTAGAAAGCGTTGTGTGGCCCTGATTCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGATGGGAAGTCACTATCTaGGTGTATCTCATCTCTACA +
Preference number: 5 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRWEVTI*VYLIST
Trigger: TGTAGAGATGAGATACACCAAGATAGTGACTTCCCA...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp AGAGAAAACACTTCAGGATGGAAACGTGCACACTGGTCATGCCAAGATTTCTCTAATGAGGAAAATTCGTaGACCTTTTGGGCCTATAAA +
Preference number: 5 (lower is better)
Translates to: RENTSGWKRAHWSCQDFSNEENS*TFWAYK
Trigger: TTTATAGGCCCAAAAGGTCAACGAATTTTCCTCATT...AGAGAAATCTTGGCATGACCAGTGTGCACGTTTCCATCCTGAAGTGTTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp CCATACTTTATCATGGAACTAAGGAAGGGAGGAAGGCCATGGAAATTCAACTTGTATACACCTTGGACATaGTGTTTAAGAATCACACCC +
Preference number: 5 (lower is better)
Translates to: PYFIMELRKGGRPWKFNLYTPWT*CLRITP
Trigger: GGGTGTGATTCTTAAACACAATGTCCAAGGTGTATA...CAAGTTGAATTTCCATGGCCTTCCTCCCTTCCTTAGTTCCATGATAAAGTATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp TTTGCTTCCAGTTATGACCAATGTGAGGGCTTGACAATATTTGGTGTTTCCTTGATAGATGGTGCCAAATaGCCCTTCCTAGAAGTTGTA +
Preference number: 5 (lower is better)
Translates to: FASSYDQCEGLTIFGVSLIDGAK*PFLEVV
Trigger: TACAACTTCTAGGAAGGGCAATTTGGCACCATCTAT...CAAGGAAACACCAAATATTGTCAAGCCCTCACATTGGTCATAACTGGAAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483386.5
CDS CCA 90 bp AACCCAGTTTTTCTGTATATTAAGCAAGGGATAACAACTAGCATTTaGAACACACATCGAAACGCACTAATCTCTACAGCATGGACGTCT +
Preference number: 5 (lower is better)
Translates to: NPVFLYIKQGITTSI*NTHRNALISTAWTS
Trigger: AGACGTCCATGCTGTAGAGATTAGTGCGTTTCGATGTGTGTTCCAAATGCTAGTTGTTATCCCTTGCTTAATATACAGAAAAACTGGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp TGTATTATTAACACCATTAAGCAGGCACCTATTCTAAGCTTCAACTTCATCCTCCATCAGCGAGGGACATaGTCTGGTAAGCATAGTATA +
Preference number: 5 (lower is better)
Translates to: CIINTIKQAPILSFNFILHQRGT*SGKHSI
Trigger: TATACTATGCTTACCAGACAATGTCCCTCGCTGATG...GAGGATGAAGTTGAAGCTTAGAATAGGTGCCTGCTTAATGGTGTTAATAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS-3UTR CAA 90 bp GAAGCTCTTGGCTGGGATGAGGTTTATTCAATAAATGTTAGTGTCCTTTCCAAGACGCTTTCTAGGATCTaGGAGGATATAGTCCTATTA +
Preference number: 5 (lower is better)
Translates to: EALGWDEVYSINVSVLSKTLSRI*EDIVLL
Trigger: TAATAGGACTATATCCTCCAAGATCCTAGAAAGCGT...CTTGGAAAGGACACTAACATTTATTGAATAAACCTCATCCCAGCCAAGAGCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTCCCAATCAGTCTATCTCCCAAGGTTGGTGAGGGAATGAGACAAAGATTAAGACAGGTACTCAATCTTTaGATTCTCTTCTGCACTTAT +
Preference number: 5 (lower is better)
Translates to: FPISLSPKVGEGMRQRLRQVLNL*ILFCTY
Trigger: ATAAGTGCAGAAGAGAATCAAAAGATTGAGTACCTG...TCTTAATCTTTGTCTCATTCCCTCACCAACCTTGGGAGATAGACTGATTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp TTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATGACACATCAGGTACTCAATCTTTaGATTCTCTTCTGCACTTAT +
Preference number: 5 (lower is better)
Translates to: FKSPSNQRYIKPRINMTHQVLNL*ILFCTY
Trigger: ATAAGTGCAGAAGAGAATCAAAAGATTGAGTACCTG...ATGTGTCATATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS-3UTR CAA 90 bp AAAATGAAGTTCAAGAGTCCCTCAAACCAGAGGTACATAAAGCCCAGGATAAATATATTTGGTGTTTCCTaGCATTGGCTAGGATTGTTT +
Preference number: 5 (lower is better)
Translates to: KMKFKSPSNQRYIKPRINIFGVS*HWLGLF
Trigger: AAACAATCCTAGCCAATGCAAGGAAACACCAAATAT...ATTTATCCTGGGCTTTATGTACCTCTGGTTTGAGGGACTCTTGAACTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483386.5
ENST00000603665.1
CDS GCA 72 bp AGCCCAGGCTTCCTCACAGCAATGTGGCCGGCTCGGTaGGGGAGCAACACGGCGAGGAAAGGCAGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPGFLTAMWPAR*GSNTARKGRAS
Trigger: GCTGGCTCTGCCTTTCCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAAGCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS CCA 72 bp GCTTCTCCATGTAGCCCAGGCTTCCTCACAGCAATGTaGCCGGCTCGGTGCGGGAGCAACACGGCGAGGAAA +
Preference number: 6 (lower is better)
Translates to: ASPCSPGFLTAM*PARCGSNTARK
Trigger: TTTCCTCGCCGTGTTGCTCCCGCACCGAGCCGGCCACATTGCTGTGAGGAAGCCTGGGCTACATGGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS CCA 72 bp AGGGCCTCAGTTCCTCTCCACATGGGCCTCTTCATGTaGGCTTCTCCATGTAGCCCAGGCTTCCTCACAGCA +
Preference number: 6 (lower is better)
Translates to: RASVPLHMGLFM*ASPCSPGFLTA
Trigger: TGCTGTGAGGAAGCCTGGGCTACATGGAGAAGCCCACATGAAGAGGCCCATGTGGAGAGGAACTGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483386.5
ENST00000494992.5
ENST00000603665.1
ENST00000605679.5
CDS CCA 72 bp TTTGGTACCATTTACGAATGGCCGCTCCAACATTACTaGCTACTACGCAGAGAGCACCACCCACTGTCCACC +
Preference number: 6 (lower is better)
Translates to: FGTIYEWPLQHY*LLRREHHPLST
Trigger: GGTGGACAGTGGGTGGTGCTCTCTGCGTAGTAGCCAGTAATGTTGGAGCGGCCATTCGTAAATGGTACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS TCA 72 bp ACTTCCAATTGCTGCGAATGTTCCCTTAAGGTGGCCTaGATAGCTTTCTTCCATCCCCGAAGTGTCGGAACC +
Preference number: 6 (lower is better)
Translates to: TSNCCECSLKVA*IAFFHPRSVGT
Trigger: GGTTCCGACACTTCGGGGATGGAAGAAAGCTATTCAGGCCACCTTAAGGGAACATTCGCAGCAATTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 72 bp TTCCATCCCCGAAGTGTCGGAACCAAACAAAAATGGTaGTCTCACGATAAGGATCACTCCAGTGATTGTGAA +
Preference number: 6 (lower is better)
Translates to: FHPRSVGTKQKW*SHDKDHSSDCE
Trigger: TTCACAATCACTGGAGTGATCCTTATCGTGAGACCACCATTTTTGTTTGGTTCCGACACTTCGGGGATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 72 bp TTCTTCCATCCCCGAAGTGTCGGAACCAAACAAAAATaGTGGTCTCACGATAAGGATCACTCCAGTGATTGT +
Preference number: 6 (lower is better)
Translates to: FFHPRSVGTKQK*WSHDKDHSSDC
Trigger: ACAATCACTGGAGTGATCCTTATCGTGAGACCACCATTTTTGTTTGGTTCCGACACTTCGGGGATGGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 72 bp CTTGAGACATATCCAAGCAAATATGGACGTAAACACTaGACTGCTAAACGTGATAACTGTGGCATCAGCGAG +
Preference number: 6 (lower is better)
Translates to: LETYPSKYGRKH*TAKRDNCGISE
Trigger: CTCGCTGATGCCACAGTTATCACGTTTAGCAGTCCAGTGTTTACGTCCATATTTGCTTGGATATGTCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS GCA 72 bp CACTTTCAACGAGGCCAAGTACTACATAATACCAAATaGTCAGAAAGTAGTCCACAGATTTTCCCATTTTTC +
Preference number: 6 (lower is better)
Translates to: HFQRGQVLHNTK*SESSPQIFPFF
Trigger: GAAAAATGGGAAAATCTGTGGACTACTTTCTGAGCATTTGGTATTATGTAGTACTTGGCCTCGTTGAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 72 bp ATATGTATTTCAGCAATGATGCTTCATTTGGAACTTTaGTACCATTTACGAATGGCCGCTCCAACATTACTG +
Preference number: 6 (lower is better)
Translates to: ICISAMMLHLEL*YHLRMAAPTLL
Trigger: CAGTAATGTTGGAGCGGCCATTCGTAAATGGTACCAAAGTTCCAAATGAAGCATCATTGCTGAAATACATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2
CDS CCA 72 bp TTTCTGTATATTAAGCAAGGGATAACAACTAGCATTTaGAACACACATCGAAACGCACTAATCTCTACAGCA +
Preference number: 6 (lower is better)
Translates to: FLYIKQGITTSI*NTHRNALISTA
Trigger: TGCTGTAGAGATTAGTGCGTTTCGATGTGTGTTCCAAATGCTAGTTGTTATCCCTTGCTTAATATACAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371408.7
ENST00000427197.2