RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35F6 (Homo sapiens)

Ensembl gene IDs: ENSG00000213699

Ensembl transcript IDs: ENST00000344420.10, ENST00000414029.1, ENST00000429494.5, ENST00000482746.1

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCCTCTaGCAGGGGCCGGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTG +
Preference number: 1 (lower is better)
Translates to: GSAGATQQSLLLALL*QGPAPGQAAQQRTV
Trigger: CACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCCGGCCCCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp CTGGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTaGTCGCTCTCCTCTGCCAGGGGCCGGCCCCTGGACAGGCGGCCC +
Preference number: 1 (lower is better)
Translates to: LASLMGVRVPPSSLS*SLSSARGRPLDRRP
Trigger: GGGCCGCCTGTCCAGGGGCCGGCCCCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CCA 90 bp CCAGCAGTCTCTCCTGCTCGCTCTCCTCTGCCAGGGGCCGGCCCCTaGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGG +
Preference number: 1 (lower is better)
Translates to: PAVSPARSPLPGAGP*TGGPAADGVAHCRG
Trigger: CCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCCGGCCCCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp CACGGCAATGAGCGGCTGCTGGCCCACCTGGCAGAAGGCGTCCAATaGATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCGGC +
Preference number: 1 (lower is better)
Translates to: HGNERLLAHLAEGVQ*ILQCPTRVSAEGAG
Trigger: GCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR TCA 90 bp AGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGTAGTACATGGGCACCAGCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: RRRPMHPPVSHEGFR*RSRRGCSTWAPAAG
Trigger: CCCTGCTGCTGGTGCCCATGTACTACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp GCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTaGCACGGCAATGAGCGGCTGCTGGCCCACCTGGCAGAAGGCGTC +
Preference number: 1 (lower is better)
Translates to: ACEVEEGNAADVAQQ*HGNERLLAHLAEGV
Trigger: GACGCCTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp GATCTGCAGTGCATGGAAGGCCTCCCAGCCCAGTGCCAGGCTCAGTaGCCAGATGACAACGGTGCGCAAGCTGTCCAACACCATGCGGGT +
Preference number: 1 (lower is better)
Translates to: DLQCMEGLPAQCQAQ*PDDNGAQAVQHHAG
Trigger: ACCCGCATGGTGTTGGACAGCTTGCGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTGGGCTGGGAGGCCTTCCATGCACTGCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CCA 90 bp TGCTCTAGGTCCCTGTCTGCTGCAGAATCATGTGGCTGCTGGACCTaGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCC +
Preference number: 1 (lower is better)
Translates to: CSRSLSAAESCGCWT*GSPRSLQELRVGDS
Trigger: GGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTCCAGCAGCCACATGATTCTGCAGCAGACAGGGACCTAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp GAGGAAGCCAAGGATCTGCAGTGCATGGAAGGCCTCCCAGCCCAGTaGCAGGCTCAGTGCCCAGATGACAACGGTGCGCAAGCTGTCCAA +
Preference number: 1 (lower is better)
Translates to: EEAKDLQCMEGLPAQ*QAQCPDDNGAQAVQ
Trigger: TTGGACAGCTTGCGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCTTGGCTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp TCTCTAGGCAGGCAGGTTGCCAGGGGTGGGGCTGAGATCCAGATGTaGTCTAGGTCCCTGTCTGCTGCAGAATCATGTGGCTGCTGGACC +
Preference number: 1 (lower is better)
Translates to: SLGRQVARGGAEIQM*SRSLSAAESCGCWT
Trigger: GGTCCAGCAGCCACATGATTCTGCAGCAGACAGGGACCTAGAGCACATCTGGATCTCAGCCCCACCCCTGGCAACCTGCCTGCCTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR GCA 90 bp CCGGCCCAGGAAGGCCACCGAGAACAGGCCAGTGAATATGATCACTaGACCCCGCAGCATCTGGAAGCTGGAGGCACTGGTCATGTTCAG +
Preference number: 1 (lower is better)
Translates to: PAQEGHREQASEYDH*TPQHLEAGGTGHVQ
Trigger: CTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGTGGCCTTCCTGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR GCA 90 bp CACCATGCGGGTGGTGGCGCTCAGTTCCTTGGTGACGCTGATGCCTaGGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGC +
Preference number: 1 (lower is better)
Translates to: HHAGGGAQFLGDADA*EVEEGNAADVAQQC
Trigger: GCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCACCACCCGCATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CCA 90 bp CCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGGCTGCTTaGTTCCCTGCGGTTCCTGATGCCACCCCTTCTCTTCAGGGTGGT +
Preference number: 1 (lower is better)
Translates to: PHSTVPRSSTGPKAA*FPAVPDATPSLQGG
Trigger: ACCACCCTGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 90 bp GCCACCCCTTCTCTTCAGGGTGGTTACCTAGAAGACAACAGTACATaGGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCA +
Preference number: 1 (lower is better)
Translates to: ATPSLQGGYLEDNST*GFQPSPRRSIPKTP
Trigger: TGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATGTACTGTTGTCTTCTAGGTAACCACCCTGAAGAGAAGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 90 bp ACCGAGAACAGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGCCACATACATGAGG +
Preference number: 1 (lower is better)
Translates to: TENRPVNMITAPRSI*KLEALVMFRATYMR
Trigger: CCTCATGTATGTGGCTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR TCA 90 bp GCAGGCATTCGGTGTTTTATGACTGAGCTACCCAGGAGAATGGTTTaGGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGG +
Preference number: 1 (lower is better)
Translates to: AGIRCFMTELPRRMV*GHTQLFQGAALDQR
Trigger: CCTTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 90 bp TCCCTTCCCTCAGAGGCTATTTTGAGGCAGGCATTCGGTGTTTTATaGCTGAGCTACCCAGGAGAATGGTTTGAGGCCACACTCAACTGT +
Preference number: 1 (lower is better)
Translates to: SLPSEAILRQAFGVL*LSYPGEWFEATLNC
Trigger: ACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGCCTGCCTCAAAATAGCCTCTGAGGGAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGCAGTGCCAGGCTCAGTaGCCAGATGACAACGGTGCG +
Preference number: 2 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQQCQAQ*PDDNGA
Trigger: CGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTG...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGCCACCAGCCCCGCGATaGTGGCTAGGATGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEPPAPR*WLGCPA
Trigger: GGCTGGGCATCCTAGCCACCATCGCGGGGCTGGTGG...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CAA 90 bp ACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATaGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTC +
Preference number: 2 (lower is better)
Translates to: TRVAVEASREPQLAS*MGVRVPPSSLSCSL
Trigger: GAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGCAGTGCCACGGCAATaGGCGGCTGCTGGCCCACCT +
Preference number: 2 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIAVPRQ*AAAGPP
Trigger: AGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGC...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGGACCCCACAGAGACCTaGATGGGAGGTGGGGCCACA +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLDPTET*MGGGAT
Trigger: TGTGGCCCCACCTCCCATGCAGGTCTCTGTGGGGTC...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCACGGCAATGAGCGGCTaGTGGCCCACCTGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GIIDGSAGATQQSLLLALTAMSG*WPTWQK
Trigger: CTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGT...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCAGGCTTGTGGGGGCTaGGTAACACCACCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLQACGG*VTPPCR
Trigger: CCTGCAGGGTGGTGTTACCCAGCCCCCACAAGCCTG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQANCPQ*VHIVFV
Trigger: TACAAACACAATGTGCACCCACTGCGGGCAGTTGGC...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTC +
Preference number: 2 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLAPRSI*KLEALV
Trigger: GACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWRMPSH*LSTSLR
Trigger: CCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCAGCCCCGCGATGGTaGCTAGGATGCCCAGCCACT +
Preference number: 2 (lower is better)
Translates to: QKASNASSSVPRGFPLKEPAPRW*LGCPAT
Trigger: AGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGG...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGGCTGCTGGCCCACCTaGCAGAAGGCGTCCAATGCA +
Preference number: 2 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLGCWPT*QKASNA
Trigger: TGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWERGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGCTGGGACAGACACTGTaGCCCAGTGAAGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWELGQTL*PSEAEG
Trigger: CCCCTCAGCTTCACTGGGCCACAGTGTCTGTCCCAG...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACGGCTGCTGGCCCACCTaGCAGAAGGCGTCCAATGCA +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDGCWPT*QKASNA
Trigger: TGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCC...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CAA 90 bp CGGGTGGTGGCGCTCAGTTCCTTGGTGACGCTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCA +
Preference number: 2 (lower is better)
Translates to: RVVALSSLVTLMPAK*KKAMLLMLPSSATA
Trigger: TGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCACCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWRGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTCAGCTGGCATCATTaGTGGGAGTGCGGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDLSWHH*WECGCH
Trigger: GTGGCACCCGCACTCCCATCAATGATGCCAGCTGAG...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCGGCGGGGATCAGAGAGCTGAGGTCTaGCACTGCACTCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QCILQCPTRVSAEGAGGDQRAEV*HCTQAC
Trigger: ACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTG...ATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGAGCACAGAAGGGTGGTaGTGTGGGCAGAGGGGTATT +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLSTEGW*CGQRGI
Trigger: AATACCCCTCTGCCCACAGCACCACCCTTCTGTGCT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCAGGTTTCACTCTGTTaGCCAGGTGTGGTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLQVSLC*PGVVAQ
Trigger: CTGAGCCACCACACCTGGGCAACAGAGTGAAACCTG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGACCTGCATGGGAGGTaGGGCCACAGGTCTGGTATC +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWDLHGR*GHRSGI
Trigger: GATACCAGACCTGTGGCCCCACCTCCCATGCAGGTC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCACGGGGATGTAGTACATaGGCACCAGCAGCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: RRSTRVAVEASREPQLASRGCST*APAAGR
Trigger: TCTCCCTGCTGCTGGTGCCCATGTACTACATCCCCG...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CAA 90 bp GTGCGCAAGCTGTCCAACACCATGCGGGTGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTG +
Preference number: 2 (lower is better)
Translates to: VRKLSNTMRVVALSS*VTLMPAKLKKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGGACAGCTTGCGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGAAGACAACAGTACATaGGGCTTCCAGCCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGEDNST*GFQPSP
Trigger: AGGGCTGGGCTGGAAGCCTCATGTACTGTTGTCTTC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGT +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGHEGFR*RSRRGC
Trigger: ACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTG...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACAGCTGTCCAACACCATaGGGGTGGTGGCGCTCAGTT +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDSCPTP*GWWRSV
Trigger: AACTGAGCGCCACCACCCGCATGGTGTTGGACAGCT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGTGTTGTTATCTTCTGTaGCAGCAGCTGCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWECCYLL*QQLPWG
Trigger: CCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACA...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGAGGATCTGCAGTGCATaGAAGGCCTCCCAGCCCAGT +
Preference number: 2 (lower is better)
Translates to: STRVAVEASREPQLASLMRICSA*KASQPS
Trigger: ACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCT...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGCAGGAGGACTGATTaGTCCCAGGAGTTCAAGGCT +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWGRRTD*SQEFKA
Trigger: AGCCTTGAACTCCTGGGATCAATCAGTCCTCCTGCC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCCTCAGAGGCTATTTTaGGGCAGGCATTCGGTGTTT +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLPQRLF*GRHSVF
Trigger: AAACACCGAATGCCTGCCTCAAAATAGCCTCTGAGG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACAGCACAGAAGGGTGGTaGTGTGGGCAGAGGGGTATT +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDSTEGW*CGQRGI
Trigger: AATACCCCTCTGCCCACAGCACCACCCTTCTGTGCT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGCCAGGAGTTCAAGGCTaGAGTAAGCTGTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWPGVQG*SKLCLG
Trigger: ACCCAGGCACAGCTTACTGCAGCCTTGAACTCCTGG...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACAAGATCACAGGCCCATaGAATGCTGGGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDKITGP*NAGARR
Trigger: CCTTCTGGCCCCAGCATTCCATGGGCCTGTGATCTT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTCATGTCACAGAGCGCTaGGGGCAGGAAAAGAAGAGG +
Preference number: 2 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIHVTER*GQEKKR
Trigger: CCTCTTCTTTTCCTGCCCCCAGCGCTCTGTGACATG...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR-3UTR CCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGG +
Preference number: 2 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLRMPSH*LSTSLR
Trigger: CCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCT...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCAGCCCCGCGATGGTaGCTAGGATGCCCAGCCACT +
Preference number: 2 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLPAPRW*LGCPAT
Trigger: AGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGG...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTA +
Preference number: 2 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGANCPQ*VHIVFV
Trigger: TACAAACACAATGTGCACCCACTGCGGGCAGTTGGC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTCTCAGCTGGCATCATTaGTGGGAGTGCGGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGLSWHH*WECGCH
Trigger: GTGGCACCCGCACTCCCATCAATGATGCCAGCTGAG...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCAAAGAGGCCCTCAGTaGCAACTGCCCGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSQRGPQ*QLPAVG
Trigger: ACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTAAGGCCCAGAGCAACTaGGTAATGTGCTGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIKAQSN*VMCWEL
Trigger: TAGCTCCCAGCACATTACCCAGTTGCTCTGGGCCTT...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCCACCAGCCCCGCGATaGTGGCTAGGATGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSPPAPR*WLGCPA
Trigger: GGCTGGGCATCCTAGCCACCATCGCGGGGCTGGTGG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCATGGCAACGATGATCTaGGCCATGATGATCAACAGG +
Preference number: 2 (lower is better)
Translates to: GIIDGSAGATQQSLLLALMATMI*AMMINR
Trigger: CCTGTTGATCATCATGGCCCAGATCATCGTTGCCAT...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGCATTCGGTGTTTTATaGCTGAGCTACCCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGAFGVL*LSYPGE
Trigger: TTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSSLSLC*LSCLLR
Trigger: CCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGA...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGCAAAGAGGCCCTCAGTaGCAACTGCCCGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWQRGPQ*QLPAVG
Trigger: ACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTG...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCCCTTCTCTTCAGGGTaGTTACCTAGAAGACAACAG +
Preference number: 2 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGPFSSG*LPRRQQ
Trigger: CTGTTGTCTTCTAGGTAACCACCCTGAAGAGAAGGG...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTC +
Preference number: 2 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWAPRSI*KLEALV
Trigger: GACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGC...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGCGGGGATGTAGTACATaGGCACCAGCAGCAGGGAGA +
Preference number: 2 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWRGCST*APAAGR
Trigger: TCTCCCTGCTGCTGGTGCCCATGTACTACATCCCCG...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTAGGATCTGCAGTGCATaGAAGGCCTCCCAGCCCAGT +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGRICSA*KASQPS
Trigger: ACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCATTCGGTGTTTTATaGCTGAGCTACCCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWAFGVL*LSYPGE
Trigger: TTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTAGAAGGCAATGCTGCTaGTGTTGCCCAGCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGRRQCC*CCPAVP
Trigger: TGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGCTACTCAGGGGACTTaGTTGAACCTGGGAGCGGGA +
Preference number: 2 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKATQGT*LNLGAG
Trigger: TCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGC...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACAGTGAATATGATCACTaGACCCCGCAGCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDSEYDH*TPQHLE
Trigger: TTCCAGATGCTGCGGGGTGCAGTGATCATATTCACT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCTGACTGTCGTGCTTaGTCAGGAGGTCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEADCRA*SGGQPG
Trigger: GCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGC...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACAAGCTGTCCAACACCATaGGGGTGGTGGCGCTCAGTT +
Preference number: 2 (lower is better)
Translates to: GPEGTKATASTSTSQSITSCPTP*GWWRSV
Trigger: AACTGAGCGCCACCACCCGCATGGTGTTGGACAGCT...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGTGTTGTTATCTTCTGTaGCAGCAGCTGCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWECCYLL*QQLPWG
Trigger: CCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACA...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCAGGCTTGTGGGGGCTaGGTAACACCACCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSQACGG*VTPPCR
Trigger: CCTGCAGGGTGGTGTTACCCAGCCCCCACAAGCCTG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGAAGATCACAGGCCCATaGAATGCTGGGGCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWKITGP*NAGARR
Trigger: CCTTCTGGCCCCAGCATTCCATGGGCCTGTGATCTT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCT +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLSLNLL*GMVSSS
Trigger: AGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGA...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGCCAACACCATGCGGGTaGTGGCGCTCAGTTCCTTGG +
Preference number: 2 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKPTPCG*WRSVPW
Trigger: CCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGG...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSRGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGCCCTCAGTGCCAACTaGCCGCAGTGGGTGCACATT +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSALSAN*PQWVHI
Trigger: AATGTGCACCCACTGCGGGCAGTTGGCACTGAGGGC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGCAGTGCCAGGCTCAGTaGCCAGATGACAACGGTGCG +
Preference number: 2 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKQCQAQ*PDDNGA
Trigger: CGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTG...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLEKKRT*VLLSSV
Trigger: CACAGAAGATAACAACACCCAAGTCCTCTTTTTCTC...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGAAGGCCCAGAGCAACTaGGTAATGTGCTGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWKAQSN*VMCWEL
Trigger: TAGCTCCCAGCACATTACCCAGTTGCTCTGGGCCTT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGACAATAAACCAGGCATaGTGGTACATACCTGTTAGT +
Preference number: 2 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLTINQA*WYIPVS
Trigger: ACTAACAGGTATGTACCACCATGCCTGGTTTATTGT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTGCTGCAGAATCATGTaGCTGCTGGACCTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKCCRIM*LLDLGV
Trigger: GACCCCCAGGTCCAGCAGCCACATGATTCTGCAGCA...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGGACCTGCATGGGAGGTaGGGCCACAGGTCTGGTATC +
Preference number: 2 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKDLHGR*GHRSGI
Trigger: GATACCAGACCTGTGGCCCCACCTCCCATGCAGGTC...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGCAGCATCTGGAAGCTaGAGGCACTGGTCATGTTCA +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGAASGS*RHWSCS
Trigger: TGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR CAA 90 bp GGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTaGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCTTGTCTTTA +
Preference number: 2 (lower is better)
Translates to: GVPQVLAGAEGRRLH*PNNLELWASVSLSL
Trigger: TAAAGACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKVPCGS*CHPFSS
Trigger: TGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAAC...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGTCAGAGCCACATACATaGGGCTGGTCCCTGTCATGT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWSEPHT*GWSLSC
Trigger: ACATGACAGGGACCAGCCTCATGTATGTGGCTCTGA...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR-3UTR GCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCAGGAGTTCAAGGCTaGAGTAAGCTGTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPGVQG*SKLCLG
Trigger: ACCCAGGCACAGCTTACTGCAGCCTTGAACTCCTGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGACAATTGACAAGGGCTaGCTGGAATTTCCCTGTAAT +
Preference number: 2 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWTIDKG*LEFPCN
Trigger: ATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCACTGGACCAAAGGCTaGTTGGTTCCCTGCGGTTCC +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSHWTKG*LVPCGS
Trigger: GGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCACGGCAATGAGCGGCTaGTGGCCCACCTGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPTAMSG*WPTWQK
Trigger: CTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGGCAGTAAGCTGTGCCTaGGTGACAGAGCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKAVSCA*VTEQDP
Trigger: AGGGTCTTGCTCTGTCACCCAGGCACAGCTTACTGC...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGAACAACTTAGAACTTTaGGCCTCAGTTTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWENNLEL*ASVSLS
Trigger: AGACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCT +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDSLNLL*GMVSSS
Trigger: AGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGA...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGCCTGGGATTCAAAGCTaGTGGAATGGACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKPGIQS*WNGPSL
Trigger: GAGGGAGGGTCCATTCCACCAGCTTTGAATCCCAGG...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGATGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWMRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAT...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCCAGGAGAATGGTTTaGGGCCACACTCAACTGTTC +
Preference number: 2 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPRRMV*GHTQLF
Trigger: GAACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGCAGAGAGCTGAGGTCTaGCACTGCACTCAGGCTTGT +
Preference number: 2 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKQRAEV*HCTQAC
Trigger: ACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTG...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTTACCCAGGTGTGTTATaGACCTGTAATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGYPGVL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATAACACACCTGGGTA...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGGGTGACGCTGATGCCTaGGAAGTTGAAGAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWGDADA*EVEEGN
Trigger: ATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACC...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGCCCAGCAGTCTCTCCTaGTCGCTCTCCTCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQPSSLS*SLSSAR
Trigger: CCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGGG...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACAAAAATTAGCCGGATGTaGTGGCACACGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: GPEGTKATASTSTSQSITKISRM*WHTPVV
Trigger: GACTACAGGCGTGTGCCACCACATCCGGCTAATTTT...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAGCAGTAAGCTGTGCCTaGGTGACAGAGCAAGACCCT +
Preference number: 2 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSAVSCA*VTEQDP
Trigger: AGGGTCTTGCTCTGTCACCCAGGCACAGCTTACTGC...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACATTCATAAAAACAATTaGCAAGGGCTGCCTGGAATT +
Preference number: 2 (lower is better)
Translates to: HEASSPALGDPSQRPHRDIHKNN*QGLPGI
Trigger: AATTCCAGGCAGCCCTTGTCAATTGTTTTTATGAAT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGTACCCAGGTGTGTTATaGACCTGTAATCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWYPGVL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATAACACACCTGGGTA...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAGTGAATATGATCACTaGACCCCGCAGCATCTGGAA +
Preference number: 2 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRSEYDH*TPQHLE
Trigger: TTCCAGATGCTGCGGGGTGCAGTGATCATATTCACT...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGCTTAGTCTGTCATCTTaGGAGTTCTCTAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRLSLSS*EFSRQA
Trigger: TGCCTGCCTAGAGAACTCCCAAGATGACAGACTAAG...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAGGTGACGCTGATGCCTaGGAAGTTGAAGAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSGDADA*EVEEGN
Trigger: ATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACC...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWTVFSG*SRSQAH
Trigger: ATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGT...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKTVFSG*SRSQAH
Trigger: ATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGT...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGACCTTCTCTGGGGCATaGTTTCTTCATCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEETFSGA*FLHLFP
Trigger: TGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGT...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCTCCTCTAGCACCATCTaGATGGCAACGATGATCTGG +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSSSSTI*MATMIW
Trigger: CCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGA...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGACAATTGACAAGGGCTaGCTGGAATTTCCCTGTAAT +
Preference number: 2 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWTIDKG*LEFPCN
Trigger: ATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGCTGACTGTCGTGCTTaGTCAGGAGGTCAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRADCRA*SGGQPG
Trigger: GCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGGAGGGGTATTTCCAGTaGATGGGCTGTTACTGTTTT +
Preference number: 2 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKEGYFQ*MGCYCF
Trigger: AAAACAGTAACAGCCCATCCACTGGAAATACCCCTC...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCTTAGTCTGTCATCTTaGGAGTTCTCTAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSLSLSS*EFSRQA
Trigger: TGCCTGCCTAGAGAACTCCCAAGATGACAGACTAAG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR TCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRVPCGS*CHPFSS
Trigger: TGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAAC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCAAGCTGTAATAACCTaGTGGAATCCCACACAACCT +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSQAVIT*WNPTQP
Trigger: AGGTTGTGTGGGATTCCAGCAGGTTATTACAGCTTG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGTGCTGCAGAATCATGTaGCTGCTGGACCTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRCCRIM*LLDLGV
Trigger: GACCCCCAGGTCCAGCAGCCACATGATTCTGCAGCA...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGGGATTCAAAGCTGGTaGAATGGACCCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRGIQSW*NGPSLP
Trigger: GGGGAGGGAGGGTCCATTCCACCAGCTTTGAATCCC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCTCCTCTAGCACCATCTaGATGGCAACGATGATCTGG +
Preference number: 2 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPSSSTI*MATMIW
Trigger: CCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGA...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAGGTATTTCCAGTGGATaGGCTGTTACTGTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSGISSG*AVTVFS
Trigger: TGAGAAAACAGTAACAGCCCATCCACTGGAAATACC...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGAGATTGAGACCATCCTaGCCAACATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQRLRPS*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGCCAGGATGGTCTCAATCT...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: EGRRLHLPNNLELWASVSEKKRT*VLLSSV
Trigger: CACAGAAGATAACAACACCCAAGTCCTCTTTTTCTC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGACCTTCTCTGGGGCATaGTTTCTTCATCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRTFSGA*FLHLFP
Trigger: TGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGT...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGATGGCAACGATGATCTaGGCCATGATGATCAACAGG +
Preference number: 2 (lower is better)
Translates to: IILNGRILLSLSSWEFSRMATMI*AMMINR
Trigger: CCTGTTGATCATCATGGCCCAGATCATCGTTGCCAT...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGACAATAAACCAGGCATaGTGGTACATACCTGTTAGT +
Preference number: 2 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQTINQA*WYIPVS
Trigger: ACTAACAGGTATGTACCACCATGCCTGGTTTATTGT...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp ACCAGCCCCGCGATGGTGGCTAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGGCCCAGGAAGGCCACC +
Preference number: 3 (lower is better)
Translates to: TSPAMVARMPSH*LSTSLRPRKAT
Trigger: GGTGGCCTTCCTGGGCCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp CTTGGGGATAGGGCATTCGGGGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAAGGAGCACCCGGGTGG +
Preference number: 3 (lower is better)
Translates to: LGDRAFGAHQPV*PQSQGEGAPGW
Trigger: CCACCCGGGTGCTCCTTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGCCCCGAATGCCCTATCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGGACAGGGTGAGGCCTaGGGGATAGGGCATTCGGGG +
Preference number: 3 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLGQGEA*GIGHSG
Trigger: CCCCGAATGCCCTATCCCCAAGGCCTCACCCTGTCC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 3 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 72 bp CCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGTAGTACATGGGCACCA +
Preference number: 3 (lower is better)
Translates to: PMHPPVSHEGFR*RSRRGCSTWAP
Trigger: TGGTGCCCATGTACTACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 72 bp GTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTaGCACGGCAATGAGCGGCTGCTGGCCCACCTGGCA +
Preference number: 3 (lower is better)
Translates to: VEEGNAADVAQQ*HGNERLLAHLA
Trigger: TGCCAGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR GCA 72 bp AAGGATCTGCAGTGCATGGAAGGCCTCCCAGCCCAGTaGCAGGCTCAGTGCCCAGATGACAACGGTGCGCAA +
Preference number: 3 (lower is better)
Translates to: KDLQCMEGLPAQ*QAQCPDDNGAQ
Trigger: TTGCGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGCAATGCTGCTGATGTaGCCCAGCAGTGCCACGGCA +
Preference number: 3 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIAMLLM*PSSATA
Trigger: TGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGC...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGACAGGTTTCACTCTGTaGCCCAGGTGTGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWETGFTL*PRCGGS
Trigger: TGAGCCACCACACCTGGGCAACAGAGTGAAACCTGT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCG +
Preference number: 3 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEVALSS*VTLMPA
Trigger: CGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCAC...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGGGACAGGGTGAGGCCTaGGGGATAGGGCATTCGGGG +
Preference number: 3 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWGQGEA*GIGHSG
Trigger: CCCCGAATGCCCTATCCCCAAGGCCTCACCCTGTCC...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGACCCAGGAGAATGGTTaGAGGCCACACTCAACTGTT +
Preference number: 3 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWETQENG*RPHSTV
Trigger: AACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 72 bp CACTGGACCAAAGGCTGCTTGGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCAGGGTGGTTACCTAGA +
Preference number: 3 (lower is better)
Translates to: HWTKGCLVPCGS*CHPFSSGWLPR
Trigger: TCTAGGTAACCACCCTGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 3 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGACTCAGGGGACTTGCTaGAACCTGGGAGCGGGAGGT +
Preference number: 3 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWTQGTC*NLGAGG
Trigger: ACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGT...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGACTCAGGGGACTTGCTaGAACCTGGGAGCGGGAGGT +
Preference number: 3 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRTQGTC*NLGAGG
Trigger: ACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGT...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGACCCAGGAGAATGGTTaGAGGCCACACTCAACTGTT +
Preference number: 3 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWTQENG*RPHSTV
Trigger: AACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCG +
Preference number: 3 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKVALSS*VTLMPA
Trigger: CGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCAC...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp AGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGCCACA +
Preference number: 3 (lower is better)
Translates to: RPVNMITAPRSI*KLEALVMFRAT
Trigger: TGTGGCTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429494.5
3UTR CCA 72 bp CACCACCCTGCAGGTGGTAGTGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: HHPAGGSEKKRT*VLLSSVAAAAL
Trigger: CAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTCTCACTACCACCTGCAGGGTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp AAAGCCAAAGAGGCCCTCAGTGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTAGACGAACTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: KAKEALSANCPQ*VHIVFVDELLL
Trigger: GAGGAGAAGTTCGTCTACAAACACAATGTGCACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAACAGGTTTCACTCTGTaGCCCAGGTGTGGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKTGFTL*PRCGGS
Trigger: TGAGCCACCACACCTGGGCAACAGAGTGAAACCTGT...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 72 bp TCTCTTCAGGGTGGTTACCTAGAAGACAACAGTACATaGGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCA +
Preference number: 3 (lower is better)
Translates to: SLQGGYLEDNST*GFQPSPRRSIP
Trigger: TGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATGTACTGTTGTCTTCTAGGTAACCACCCTGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR GCA 72 bp TTTTCTCAGGTTGGTCAAGATCACAGGCCCATGGAATaGTGGGGCCAGAAGGCACTAAGGCCACAGCATCAA +
Preference number: 3 (lower is better)
Translates to: FSQVGQDHRPME*WGQKALRPQHQ
Trigger: TTGATGCTGTGGCCTTAGTGCCTTCTGGCCCCAGCATTCCATGGGCCTGTGATCTTGACCAACCTGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp GGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATaGGCTGTTACTGTTTTCTCAGGTTGGTCAAGATCA +
Preference number: 3 (lower is better)
Translates to: GWCCGQRGISSG*AVTVFSGWSRS
Trigger: TGATCTTGACCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp AGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTaGATGGGCTGTTACTGTTTTCTCAGGTTGGTCAAG +
Preference number: 3 (lower is better)
Translates to: RRVVLWAEGYFQ*MGCYCFLRLVK
Trigger: CTTGACCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGCTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWLMPAK*KKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAG...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCA +
Preference number: 3 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWYCFLR*VKITGP
Trigger: TGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTA...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp ATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCATGGAATGCTGGGGCCA +
Preference number: 3 (lower is better)
Translates to: ISSGWAVTVFSG*SRSQAHGMLGP
Trigger: TGGCCCCAGCATTCCATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp TTCTCCTCTAGCACCATCTGGATGGCAACGATGATCTaGGCCATGATGATCAACAGGTCCCCTGTGATCACT +
Preference number: 3 (lower is better)
Translates to: FSSSTIWMATMI*AMMINRSPVIT
Trigger: AGTGATCACAGGGGACCTGTTGATCATCATGGCCCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCACTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSLMPAK*KKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAG...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 3 (lower is better)
Translates to: IILNGRILLSLSSWEFSRPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCA +
Preference number: 3 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKYCFLR*VKITGP
Trigger: TGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTA...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CCA 72 bp ACTGGCTCCATAAAGAGGAAGTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAA +
Preference number: 3 (lower is better)
Translates to: TGSIKRKSLNLL*GMVSSSVPTSE
Trigger: TTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACTTCCTCTTTATGGAGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGAAACAACTTAGAACTTaGGGCCTCAGTTTCCTTGTC +
Preference number: 3 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKKQLRT*GLSFLV
Trigger: GACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTT...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR-3UTR CAA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAAAACAACTTAGAACTTaGGGCCTCAGTTTCCTTGTC +
Preference number: 3 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSKQLRT*GLSFLV
Trigger: GACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTT...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR TCA 72 bp TCTGTTCCCACCTCTGAAGACTATCGTAAGACAGAATaGAAGTTAAGCAACTTAACGCAACGCCCAGGATAC +
Preference number: 3 (lower is better)
Translates to: SVPTSEDYRKTE*KLSNLTQRPGY
Trigger: GTATCCTGGGCGTTGCGTTAAGTTGCTTAACTTTCATTCTGTCTTACGATAGTCTTCAGAGGTGGGAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGGCAGTGCCACGGCAATaGGCGGCTGCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQAVPRQ*AAAGPP
Trigger: AGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGC...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWRMPSH*LSTSLR
Trigger: CCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCT...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGCAGGCTTGTGGGGGCTaGGTAACACCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWQACGG*VTPPCR
Trigger: CCTGCAGGGTGGTGTTACCCAGCCCCCACAAGCCTG...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGGCAGTGCCACGGCAATaGGCGGCTGCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEAVPRQ*AAAGPP
Trigger: AGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGC...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGGAAGACAACAGTACATaGGGCTTCCAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQEDNST*GFQPSP
Trigger: AGGGCTGGGCTGGAAGCCTCATGTACTGTTGTCTTC...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCGGCGGGGATAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QCILQCPTRVSAEGAGGDRMPSH*LSTSLR
Trigger: CCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCT...ATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGCCTGGGATTCAAAGCTaGTGGAATGGACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQPGIQS*WNGPSL
Trigger: GAGGGAGGGTCCATTCCACCAGCTTTGAATCCCAGG...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLHEGFR*RSRRGC
Trigger: ACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTG...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGACGGCAATGAGCGGCTaGTGGCCCACCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLTAMSG*WPTWQK
Trigger: CTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGAGCTGTCCAACACCATaGGGGTGGTGGCGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWSCPTP*GWWRSV
Trigger: AACTGAGCGCCACCACCCGCATGGTGTTGGACAGCT...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPAPRSI*KLEALV
Trigger: GACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGC...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCGGCGGGGATCAGGCTTGTGGGGGCTaGGTAACACCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QCILQCPTRVSAEGAGGDQACGG*VTPPCR
Trigger: CCTGCAGGGTGGTGTTACCCAGCCCCCACAAGCCTG...ATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLRGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGCCCCTGGACAGGCGGCCCAGCAGCGGACGGTGTAGCCCATTGTAGAGGGCAGATGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GPWTGGPAADGVAHCRGQMRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAT...CTGCCCTCTACAATGGGCTACACCGTCCGCTGCTGGGCCGCCTGTCCAGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCGCTGACTGTCGTGCTTaGTCAGGAGGTCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GIIDGSAGATQQSLLLALADCRA*SGGQPG
Trigger: GCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGC...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGACGGCAATGAGCGGCTaGTGGCCCACCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWETAMSG*WPTWQK
Trigger: CTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGTGGAGGAAGGGATGCTaGAAGCTGTGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWWRKGC*KLCSLL
Trigger: GAGCAAGGAGCACAGCTTCCAGCATCCCTTCCTCCA...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCCAGCCCCGCGATGGTaGCTAGGATGCCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: HEASSPALGDPSQRPHRDPAPRW*LGCPAT
Trigger: AGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGG...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGGCAATGAGCGGCTGCTaGCCCACCTGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QKASNASSSVPRGFPLKEAMSGC*PTWQKA
Trigger: CGCCTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGC...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGAATCATGTGGCTGCTaGACCTGGGGGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGESCGC*TWGSPR
Trigger: CCTGGGGGACCCCCAGGTCCAGCAGCCACATGATTC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLSLSLC*LSCLLR
Trigger: CCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGA...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGCTCAGCTGGCATCATTaGTGGGAGTGCGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWELSWHH*WECGCH
Trigger: GTGGCACCCGCACTCCCATCAATGATGCCAGCTGAG...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGAGGGTTGAAGGGCTaGTGGGGGTCTACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGRGLKG*WGSTLE
Trigger: CTCCAGCGTAGACCCCCAGCAGCCCTTCAACCCTCT...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGACGGCAATGAGCGGCTaGTGGCCCACCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMTAMSG*WPTWQK
Trigger: CTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGCCGT...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCAGCTGTCCAACACCATaGGGGTGGTGGCGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GIIDGSAGATQQSLLLALSCPTP*GWWRSV
Trigger: AACTGAGCGCCACCACCCGCATGGTGTTGGACAGCT...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCAGAGCCACATACATGAGGCTGGTCCCTGTCATGTCACAGAGCGCTGGGGGCGACCCCACAGAGACCTaGATGGGAGGTGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: FRATYMRLVPVMSQSAGGDPTET*MGGGAT
Trigger: TGTGGCCCCACCTCCCATGCAGGTCTCTGTGGGGTC...GCCCCCAGCGCTCTGTGACATGACAGGGACCAGCCTCATGTATGTGGCTCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429494.5
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCACTGGACCAAAGGCTaGTTGGTTCCCTGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLHWTKG*LVPCGS
Trigger: GGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGACCTGCATGGGAGGTaGGGCCACAGGTCTGGTATC +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGDLHGR*GHRSGI
Trigger: GATACCAGACCTGTGGCCCCACCTCCCATGCAGGTC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGTCCAAGGAGCAGCACTaGACCAAAGGCTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWSKEQH*TKGCLV
Trigger: AACCAAGCAGCCTTTGGTCCAGTGCTGCTCCTTGGA...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGCTGGGACAGACACTGTaGCCCAGTGAAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLLGQTL*PSEAEG
Trigger: CCCCTCAGCTTCACTGGGCCACAGTGTCTGTCCCAG...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CAA 72 bp GCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATaGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVEASREPQLAS*MGVRVPPSSLS
Trigger: GGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCCACAGCCCTCGGCCATaGAATTGTCCGCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPHSPRP*NCPPIL
Trigger: CAAAATGGGCGGACAATTTCATGGCCGAGGGCTGTG...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR TCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGCTCAGCTGGCATCATTaGTGGGAGTGCGGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWLSWHH*WECGCH
Trigger: GTGGCACCCGCACTCCCATCAATGATGCCAGCTGAG...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCAGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRSTRVAVEASREPQLASVPCGS*CHPFSS
Trigger: TGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAAC...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCTGACTGTCGTGCTTaGTCAGGAGGTCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWADCRA*SGGQPG
Trigger: GCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCCCTCAGTGCCAACTaGCCGCAGTGGGTGCACATT +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWALSAN*PQWVHI
Trigger: AATGTGCACCCACTGCGGGCAGTTGGCACTGAGGGC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGCAAAGAGGCCCTCAGTaGCAACTGCCCGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWQRGPQ*QLPAVG
Trigger: ACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTG...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGGCAGAAGGCGTCCAATaGATCCTCCAGTGTCCCACG +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEAEGVQ*ILQCPT
Trigger: CGTGGGACACTGGAGGATGCATTGGACGCCTTCTGC...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGCTACTCAGGGGACTTaGTTGAACCTGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGATQGT*LNLGAG
Trigger: TCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCCAGGTTTCACTCTGTTaGCCAGGTGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GIIDGSAGATQQSLLLALQVSLC*PGVVAQ
Trigger: CTGAGCCACCACACCTGGGCAACAGAGTGAAACCTG...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGAGGATGCCCAGCCACTaGCTCAGCACCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KGCLEFPCNLFQAEEASERMPSH*LSTSLR
Trigger: CCGGAGGCTGGTGCTGAGCCAGTGGCTGGGCATCCT...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGTCCTCTAGCACCATCTaGATGGCAACGATGATCTGG +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWSSSTI*MATMIW
Trigger: CCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGA...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCGGGGATGTAGTACATaGGCACCAGCAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGRGCST*APAAGR
Trigger: TCTCCCTGCTGCTGGTGCCCATGTACTACATCCCCG...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGCGGGGATGTAGTACATaGGCACCAGCAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLRGCST*APAAGR
Trigger: TCTCCCTGCTGCTGGTGCCCATGTACTACATCCCCG...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: HEASSPALGDPSQRPHRDAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCTGTTGTTATCTTCTGTaGCAGCAGCTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPCCYLL*QQLPWG
Trigger: CCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACA...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGAAAATTAGCCGGATGTaGTGGCACACGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWKISRM*WHTPVV
Trigger: GACTACAGGCGTGTGCCACCACATCCGGCTAATTTT...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGCTGGGACAGACACTGTaGCCCAGTGAAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWLGQTL*PSEAEG
Trigger: CCCCTCAGCTTCACTGGGCCACAGTGTCTGTCCCAG...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEHEGFR*RSRRGC
Trigger: ACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTG...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGGCAGTGCCACGGCAATaGGCGGCTGCTGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLAVPRQ*AAAGPP
Trigger: AGGTGGGCCAGCAGCCGCTCATTGCCGTGGCACTGC...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQRGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGGCAGGAGGACTGATTaGTCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGGRRTD*SQEFKA
Trigger: AGCCTTGAACTCCTGGGATCAATCAGTCCTCCTGCC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGACGCTGGAGTCTGATTaGCCTGCAGCTCTGCATCGG +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWTLESD*PAALHR
Trigger: CCGATGCAGAGCTGCAGGGCAATCAGACTCCAGCGT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGGCTGACTGTCGTGCTTaGTCAGGAGGTCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQADCRA*SGGQPG
Trigger: GCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGC...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGGCCCTCAGTGCCAACTaGCCGCAGTGGGTGCACATT +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQALSAN*PQWVHI
Trigger: AATGTGCACCCACTGCGGGCAGTTGGCACTGAGGGC...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CTCCGGCCCAGGAAGGCCACCGAGAACAGGCCAGTGAATATGATCACTGCACCCAGCACAGAAGGGTGGTaGTGTGGGCAGAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: LRPRKATENRPVNMITAPSTEGW*CGQRGI
Trigger: AATACCCCTCTGCCCACAGCACCACCCTTCTGTGCT...GGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGTGGCCTTCCTGGGCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGCAGGTTTCACTCTGTTaGCCAGGTGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGQVSLC*PGVVAQ
Trigger: CTGAGCCACCACACCTGGGCAACAGAGTGAAACCTG...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGATTCTCCCAGGAACATaGCCACTGCTTTGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLILPGT*PLLCRE
Trigger: CTCTCGGCAAAGCAGTGGGCATGTTCCTGGGAGAAT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000429494.5
CDS-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGTGGAGGAAGGGATGCTaGAAGCTGTGCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLWRKGC*KLCSLL
Trigger: GAGCAAGGAGCACAGCTTCCAGCATCCCTTCCTCCA...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR CCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCCAGCCCCGCGATGGTaGCTAGGATGCCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSPAPRW*LGCPAT
Trigger: AGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGCCACCAGCCCCGCGATaGTGGCTAGGATGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRPPAPR*WLGCPA
Trigger: GGCTGGGCATCCTAGCCACCATCGCGGGGCTGGTGG...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGCCAACACCATGCGGGTaGTGGCGCTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQPTPCG*WRSVPW
Trigger: CCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGG...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGCAGTAAGCTGTGCCTaGGTGACAGAGCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLAVSCA*VTEQDP
Trigger: AGGGTCTTGCTCTGTCACCCAGGCACAGCTTACTGC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTTGCTGCAGAATCATGTaGCTGCTGGACCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIICCRIM*LLDLGV
Trigger: GACCCCCAGGTCCAGCAGCCACATGATTCTGCAGCA...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGCCCTTCTCTTCAGGGTaGTTACCTAGAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWPFSSG*LPRRQQ
Trigger: CTGTTGTCTTCTAGGTAACCACCCTGAAGAGAAGGG...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGGGACCAAAGGCTGCTTaGTTCCCTGCGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLGPKAA*FPAVPD
Trigger: ATCAGGAACCGCAGGGAACCAAGCAGCCTTTGGTCC...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGGACCAAAGGCTGCTTaGTTCCCTGCGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGGPKAA*FPAVPD
Trigger: ATCAGGAACCGCAGGGAACCAAGCAGCCTTTGGTCC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGTCCAAGGAGCAGCACTaGACCAAAGGCTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLSKEQH*TKGCLV
Trigger: AACCAAGCAGCCTTTGGTCCAGTGCTGCTCCTTGGA...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGGGGATTCAAAGCTGGTaGAATGGACCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMGIQSW*NGPSLP
Trigger: GGGGAGGGAGGGTCCATTCCACCAGCTTTGAATCCC...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGCCCAGGAGAATGGTTTaGGGCCACACTCAACTGTTC +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEPRRMV*GHTQLF
Trigger: GAACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGG...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGGGTGACGCTGATGCCTaGGAAGTTGAAGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLGDADA*EVEEGN
Trigger: ATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACC...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGCAGTGCCAGGCTCAGTaGCCAGATGACAACGGTGCG +
Preference number: 4 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEQCQAQ*PDDNGA
Trigger: CGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTG...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGCAGAGAGCTGAGGTCTaGCACTGCACTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMQRAEV*HCTQAC
Trigger: ACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTG...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCAGGAGTTCAAGGCTaGAGTAAGCTGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QKASNASSSVPRGFPLKEPGVQG*SKLCLG
Trigger: ACCCAGGCACAGCTTACTGCAGCCTTGAACTCCTGG...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGCCACCAGCCCCGCGATaGTGGCTAGGATGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWPPAPR*WLGCPA
Trigger: GGCTGGGCATCCTAGCCACCATCGCGGGGCTGGTGG...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGGCTGCTGGCCCACCTaGCAGAAGGCGTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGGCWPT*QKASNA
Trigger: TGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGGCTGCTGGCCCACCTaGCAGAAGGCGTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEGCWPT*QKASNA
Trigger: TGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGTGTTGTTATCTTCTGTaGCAGCAGCTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWCCYLL*QQLPWG
Trigger: CCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACA...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGAGATTGAGACCATCCTaGCCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLRLRPS*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGCCAGGATGGTCTCAATCT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGGCAGTAAGCTGTGCCTaGGTGACAGAGCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: QKASNASSSVPRGFPLKEAVSCA*VTEQDP
Trigger: AGGGTCTTGCTCTGTCACCCAGGCACAGCTTACTGC...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGAATCATGTGGCTGCTaGACCTGGGGGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGESCGC*TWGSPR
Trigger: CCTGGGGGACCCCCAGGTCCAGCAGCCACATGATTC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCAGCTACCCAGGAGAATaGTTTGAGGCCACACTCAAC +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPSYPGE*FEATLN
Trigger: GTTGAGTGTGGCCTCAAACCATTCTCCTGGGTAGCT...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCAGGTCATGTTCAGAGCTaGAGGAAGGGATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRSTRVAVEASREPQLASGHVQS*RKGCWK
Trigger: CTTCCAGCATCCCTTCCTCCAGCTCTGAACATGACC...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414029.1
3UTR CAA 72 bp CTGTCCAACACCATGCGGGTGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LSNTMRVVALSS*VTLMPAKLKKA
Trigger: TGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGAGAAGGCAATGCTGCTaGTGTTGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQRRQCC*CCPAVP
Trigger: TGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCT...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGATGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLMRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAT...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACAGGAAGCTGTGCTCCTTaGTCCCTCCACAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITGSCAP*SLHSPR
Trigger: CCGAGGGCTGTGGAGGGAGCAAGGAGCACAGCTTCC...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGAGTGAATATGATCACTaGACCCCGCAGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLSEYDH*TPQHLE
Trigger: TTCCAGATGCTGCGGGGTGCAGTGATCATATTCACT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGCCCTCAGTGCCAACTaGCCGCAGTGGGTGCACATT +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGALSAN*PQWVHI
Trigger: AATGTGCACCCACTGCGGGCAGTTGGCACTGAGGGC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTCAAAGAGGCCCTCAGTaGCAACTGCCCGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGQRGPQ*QLPAVG
Trigger: ACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTG...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGGCTGAGGTCTGCCACTaGACTCAGGCTTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWAEVCH*TQACGG
Trigger: GCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGC...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGACCCCACAGAGACCTaGATGGGAGGTGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKDPTET*MGGGAT
Trigger: TGTGGCCCCACCTCCCATGCAGGTCTCTGTGGGGTC...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGGGGGTCTACGCTaGAGTCTGATTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWAGGLR*SLIALQ
Trigger: CTGCAGGGCAATCAGACTCCAGCGTAGACCCCCAGC...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACGCAGCATCTGGAAGCTaGAGGCACTGGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: HEASSPALGDPSQRPHRDAASGS*RHWSCS
Trigger: TGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGC...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCAGCCCCGCGATGGTaGCTAGGATGCCCAGCCACT +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPAPRW*LGCPAT
Trigger: AGTGGCTGGGCATCCTAGCCACCATCGCGGGGCTGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGCCACCAGCCCCGCGATaGTGGCTAGGATGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKPPAPR*WLGCPA
Trigger: GGCTGGGCATCCTAGCCACCATCGCGGGGCTGGTGG...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIANCPQ*VHIVFV
Trigger: TACAAACACAATGTGCACCCACTGCGGGCAGTTGGC...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGGGCTGCTGGCCCACCTaGCAGAAGGCGTCCAATGCA +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRGCWPT*QKASNA
Trigger: TGCATTGGACGCCTTCTGCCAGGTGGGCCAGCAGCC...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGCCAACACCATGCGGGTaGTGGCGCTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWPTPCG*WRSVPW
Trigger: CCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGG...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGAAGGCCCAGAGCAACTaGGTAATGTGCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: QKASNASSSVPRGFPLKEKAQSN*VMCWEL
Trigger: TAGCTCCCAGCACATTACCCAGTTGCTCTGGGCCTT...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGAGAAGGGTGGTGCTGTaGGCAGAGGGGTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQRRVVL*AEGYFQ
Trigger: CTGGAAATACCCCTCTGCCCACAGCACCACCCTTCT...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGACCTGCATGGGAGGTaGGGCCACAGGTCTGGTATC +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEDLHGR*GHRSGI
Trigger: GATACCAGACCTGTGGCCCCACCTCCCATGCAGGTC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCCCCTTCTCTTCAGGGTaGTTACCTAGAAGACAACAG +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPPFSSG*LPRRQQ
Trigger: CTGTTGTCTTCTAGGTAACCACCCTGAAGAGAAGGG...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGCTGGGACAGACACTGTaGCCCAGTGAAGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWELGQTL*PSEAEG
Trigger: CCCCTCAGCTTCACTGGGCCACAGTGTCTGTCCCAG...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGTCTACGCTGGAGTCTaGTTGCCCTGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGVYAGV*LPCSSA
Trigger: TGCAGAGCTGCAGGGCAATCAGACTCCAGCGTAGAC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR TCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWESLSLC*LSCLLR
Trigger: CCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGA...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGCACGAGGGTTTCCGCTaGAGGAGCCGGCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKHEGFR*RSRRGC
Trigger: ACATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTG...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGTCGGTGTTTTATGACTaGGCTACCCAGGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWESVFYD*ATQENG
Trigger: ACCATTCTCCTGGGTAGCTCAGTCATAAAACACCGA...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCAGCATTCGGTGTTTTATaGCTGAGCTACCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRSTRVAVEASREPQLASAFGVL*LSYPGE
Trigger: TTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGC...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGATTGCCCTGCAGCTCTaGATCGGAGGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEIALQL*IGGGRR
Trigger: CCTTCTACCTCCTCCGATGCAGAGCTGCAGGGCAAT...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGACGCTGGAGTCTGATTaGCCTGCAGCTCTGCATCGG +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWTLESD*PAALHR
Trigger: CCGATGCAGAGCTGCAGGGCAATCAGACTCCAGCGT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGTGACGCTGATGCCTaGGAAGTTGAAGAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWGDADA*EVEEGN
Trigger: ATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCCAGCAGTCTCTCCTaGTCGCTCTCCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPSSLS*SLSSAR
Trigger: CCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGTACCCAGGTGTGTTATaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGYPGVL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATAACACACCTGGGTA...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGCACTGGACCAAAGGCTaGTTGGTTCCCTGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEHWTKG*LVPCGS
Trigger: GGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTG...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCAAGCTGTAATAACCTaGTGGAATCCCACACAACCT +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLQAVIT*WNPTQP
Trigger: AGGTTGTGTGGGATTCCAGCAGGTTATTACAGCTTG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKAPRSI*KLEALV
Trigger: GACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGC...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGGCAATGAGCGGCTGCTaGCCCACCTGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKAMSGC*PTWQKA
Trigger: CGCCTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGC...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAACCAACACCATGCGGGTaGTGGCGCTCAGTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKPTPCG*WRSVPW
Trigger: CCAAGGAACTGAGCGCCACCACCCGCATGGTGTTGG...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCAGGCTTGTGGGGGCTaGGTAACACCACCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEQACGG*VTPPCR
Trigger: CCTGCAGGGTGGTGTTACCCAGCCCCCACAAGCCTG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIIMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: HEASSPALGDPSQRPHRDMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLTVFSG*SRSQAH
Trigger: ATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGT...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCAACCTTCTCTGGGGCATaGTTTCTTCATCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RRSTRVAVEASREPQLASTFSGA*FLHLFP
Trigger: TGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGT...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGTCCAAGGAGCAGCACTaGACCAAAGGCTGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQSKEQH*TKGCLV
Trigger: AACCAAGCAGCCTTTGGTCCAGTGCTGCTCCTTGGA...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGGTCCCCTGTGATCACTTCGCTGAGCTTGTGCTGACTGTCGTGCTTGCTCAGCCATTTGCTTCTTCCTaGGACAGACACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QVPCDHFAELVLTVVLAQPFASS*DRHCGP
Trigger: TGGGCCACAGTGTCTGTCCCAGGAAGAAGCAAATGG...CTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CAA 72 bp GCGCTCAGTTCCTTGGTGACGCTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ALSSLVTLMPAK*KKAMLLMLPSS
Trigger: ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGAACTGAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTAGAAGGCAATGCTGCTaGTGTTGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSRRQCC*CCPAVP
Trigger: TGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCT...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGAGGGGTCCAGAGAGCTaGGGTCTGCCACTGCACTCA +
Preference number: 4 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKRGPES*GLPLHS
Trigger: TGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCT...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACAGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITVPCGS*CHPFSS
Trigger: TGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAAC...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGTCGGTGTTTTATGACTaGGCTACCCAGGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWSVFYD*ATQENG
Trigger: ACCATTCTCCTGGGTAGCTCAGTCATAAAACACCGA...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGGAAGCTGTGCTCCTTaGTCCCTCCACAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSGSCAP*SLHSPR
Trigger: CCGAGGGCTGTGGAGGGAGCAAGGAGCACAGCTTCC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR GCA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGCAAAGAGGCCCTCAGTaGCAACTGCCCGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWQRGPQ*QLPAVG
Trigger: ACCCACTGCGGGCAGTTGGCACTGAGGGCCTCTTTG...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGCAGAAGGCGTCCAATaGATCCTCCAGTGTCCCACG +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKAEGVQ*ILQCPT
Trigger: CGTGGGACACTGGAGGATGCATTGGACGCCTTCTGC...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGAGCTGTCCAACACCATaGGGGTGGTGGCGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLSCPTP*GWWRSV
Trigger: AACTGAGCGCCACCACCCGCATGGTGTTGGACAGCT...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCAGTGCCAGGCTCAGTaGCCAGATGACAACGGTGCG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEQCQAQ*PDDNGA
Trigger: CGCACCGTTGTCATCTGGGCACTGAGCCTGGCACTG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCCCCAGCAGTCTCTCCTaGTCGCTCTCCTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSPSSLS*SLSSAR
Trigger: CCTGGCAGAGGAGAGCGAGCAGGAGAGACTGCTGGG...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCAGAGAGCTGAGGTCTaGCACTGCACTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSQRAEV*HCTQAC
Trigger: ACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGTACCCAGGTGTGTTATaGACCTGTAATCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMYPGVL*TCNPSY
Trigger: GTAGCTGGGATTACAGGTGCATAACACACCTGGGTA...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGCCAGGAGTTCAAGGCTaGAGTAAGCTGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWPGVQG*SKLCLG
Trigger: ACCCAGGCACAGCTTACTGCAGCCTTGAACTCCTGG...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCACAATTGACAAGGGCTaGCTGGAATTTCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GIIDGSAGATQQSLLLALTIDKG*LEFPCN
Trigger: ATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAACACTGGACCAAAGGCTaGTTGGTTCCCTGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKHWTKG*LVPCGS
Trigger: GGAACCGCAGGGAACCAAGCAGCCTTTGGTCCAGTG...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTCATGTCACAGAGCGCTaGGGGCAGGAAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGHVTER*GQEKKR
Trigger: CCTCTTCTTTTCCTGCCCCCAGCGCTCTGTGACATG...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTC +
Preference number: 4 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSAPRSI*KLEALV
Trigger: GACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGC...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACACGGGGATGTAGTACATaGGCACCAGCAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITRGCST*APAAGR
Trigger: TCTCCCTGCTGCTGGTGCCCATGTACTACATCCCCG...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCCACCAGCCTGTGTaGCCTCAGTCTCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEAHQPV*PQSQGE
Trigger: TTCTCCCTGAGACTGAGGCCACACAGGCTGGTGGGC...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWETVFSG*SRSQAH
Trigger: ATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGGAGGGGTATTTCCAGTaGATGGGCTGTTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEEGYFQ*MGCYCF
Trigger: AAAACAGTAACAGCCCATCCACTGGAAATACCCCTC...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPSLNLL*GMVSSS
Trigger: AGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGA...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAGGGATTCAAAGCTGGTaGAATGGACCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKGIQSW*NGPSLP
Trigger: GGGGAGGGAGGGTCCATTCCACCAGCTTTGAATCCC...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCCTGGGATTCAAAGCTaGTGGAATGGACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSPGIQS*WNGPSL
Trigger: GAGGGAGGGTCCATTCCACCAGCTTTGAATCCCAGG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
3UTR CAA 72 bp CCTGCAGGTGGTAGTGAGAAAAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: PAGGSEKKRTWV*LSSVAAAALGV
Trigger: AACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTCTCACTACCACCTGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACACACAGCCCTCGGCCATaGAATTGTCCGCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITHSPRP*NCPPIL
Trigger: CAAAATGGGCGGACAATTTCATGGCCGAGGGCTGTG...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR TCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGGGCAGGAGGACTGATTaGTCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRGRRTD*SQEFKA
Trigger: AGCCTTGAACTCCTGGGATCAATCAGTCCTCCTGCC...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGCCCAGGAGAATGGTTTaGGGCCACACTCAACTGTTC +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEPRRMV*GHTQLF
Trigger: GAACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGG...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAATTCTCCCAGGAACATaGCCACTGCCTGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKILPGT*PLPGGR
Trigger: CCTTCCTCCAGGCAGTGGGCATGTTCCTGGGAGAAT...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344420.10
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCAGAGGGTTGAAGGGCTaGTGGGGGTCTACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSRGLKG*WGSTLE
Trigger: CTCCAGCGTAGACCCCCAGCAGCCCTTCAACCCTCT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGGCAGAAGGCGTCCAATaGATCCTCCAGTGTCCCACG +
Preference number: 4 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKAEGVQ*ILQCPT
Trigger: CGTGGGACACTGGAGGATGCATTGGACGCCTTCTGC...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAACAGAGAGCTGAGGTCTaGCACTGCACTCAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKQRAEV*HCTQAC
Trigger: ACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTG...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEANCPQ*VHIVFV
Trigger: TACAAACACAATGTGCACCCACTGCGGGCAGTTGGC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGAGGATCTGCAGTGCATaGAAGGCCTCCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEERICSA*KASQPS
Trigger: ACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCT...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGCCGGCGGGGATGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QCILQCPTRVSAEGAGGDEKKRT*VLLSSV
Trigger: CACAGAAGATAACAACACCCAAGTCCTCTTTTTCTC...ATCCCCGCCGGCTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGGCAGTAAGCTGTGCCTaGGTGACAGAGCAAGACCCT +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRAVSCA*VTEQDP
Trigger: AGGGTCTTGCTCTGTCACCCAGGCACAGCTTACTGC...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGTTGACAAGGGCTGCCTaGAATTTCCCTGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMLTRAA*NFPVIS
Trigger: AGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAA...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGAGCTACCCAGGAGAATaGTTTGAGGCCACACTCAAC +
Preference number: 4 (lower is better)
Translates to: KGCLEFPCNLFQAEEASESYPGE*FEATLN
Trigger: GTTGAGTGTGGCCTCAAACCATTCTCCTGGGTAGCT...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAATCAGAGCCACATACATaGGGCTGGTCCCTGTCATGT +
Preference number: 4 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKSEPHT*GWSLSC
Trigger: ACATGACAGGGACCAGCCTCATGTATGTGGCTCTGA...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR TCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGATGAGGTCAGGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWMRSGD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCCTGACCTCAT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGTTCCCTGCGGTTCCTaGTGCCACCCCTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSVPCGS*CHPFSS
Trigger: TGAAGAGAAGGGGTGGCATCAGGAACCGCAGGGAAC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCCTCAGAGGCTATTTTaGGGCAGGCATTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSPQRLF*GRHSVF
Trigger: AAACACCGAATGCCTGCCTCAAAATAGCCTCTGAGG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTGAATCCCACACAACCTaGGGGCTTCACTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGESHTT*GLHLST
Trigger: TGTTGACAAGTGAAGCCCTCAGGTTGTGTGGGATTC...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGATTGCCCTGCAGCTCTaGATCGGAGGAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEIALQL*IGGGRR
Trigger: CCTTCTACCTCCTCCGATGCAGAGCTGCAGGGCAAT...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGCTACTCAGGGGACTTaGTTGAACCTGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSATQGT*LNLGAG
Trigger: TCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGCCAGGAGTTCAAGGCTaGAGTAAGCTGTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWPGVQG*SKLCLG
Trigger: ACCCAGGCACAGCTTACTGCAGCCTTGAACTCCTGG...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACAGCAGCATCTGGAAGCTaGAGGCACTGGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITAASGS*RHWSCS
Trigger: TGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGC...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGTCCTCTAGCACCATCTaGATGGCAACGATGATCTGG +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWSSSTI*MATMIW
Trigger: CCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGA...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGGCAATGAGCGGCTGCTaGCCCACCTGGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQAMSGC*PTWQKA
Trigger: CGCCTTCTGCCAGGTGGGCCAGCAGCCGCTCATTGC...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGTATTTCCAGTGGATaGGCTGTTACTGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWGISSG*AVTVFS
Trigger: TGAGAAAACAGTAACAGCCCATCCACTGGAAATACC...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGAGAAGGGTGGTGCTGTaGGCAGAGGGGTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEERRVVL*AEGYFQ
Trigger: CTGGAAATACCCCTCTGCCCACAGCACCACCCTTCT...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGAGAAGGGTGGTGCTGTaGGCAGAGGGGTATTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWRRVVL*AEGYFQ
Trigger: CTGGAAATACCCCTCTGCCCACAGCACCACCCTTCT...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGAGATTGAGACCATCCTaGCCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWRLRPS*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGCCAGGATGGTCTCAATCT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTAGATTGAGACCATCCTaGCCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSRLRPS*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGCCAGGATGGTCTCAATCT...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGGACCAAAGGCTGCTTaGTTCCCTGCGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEGPKAA*FPAVPD
Trigger: ATCAGGAACCGCAGGGAACCAAGCAGCCTTTGGTCC...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGGGGATTCAAAGCTGGTaGAATGGACCCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKGIQSW*NGPSLP
Trigger: GGGGAGGGAGGGTCCATTCCACCAGCTTTGAATCCC...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGCCATTTGCTTCTTCCTaGGACAGACACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRPFASS*DRHCGP
Trigger: TGGGCCACAGTGTCTGTCCCAGGAAGAAGCAAATGG...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGGGCAGGAGGACTGATTaGTCCCAGGAGTTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKGRRTD*SQEFKA
Trigger: AGCCTTGAACTCCTGGGATCAATCAGTCCTCCTGCC...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGAGATTCATAAAAACAATTaGCAAGGGCTGCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: QPSPRRSIPKTPQRPAWEIHKNN*QGLPGI
Trigger: AATTCCAGGCAGCCCTTGTCAATTGTTTTTATGAAT...CTCCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATTCGGTGTTTTATGACTaGGCTACCCAGGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNSVFYD*ATQENG
Trigger: ACCATTCTCCTGGGTAGCTCAGTCATAAAACACCGA...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGGAATCCCACACAACCTaGGGGCTTCACTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRESHTT*GLHLST
Trigger: TGTTGACAAGTGAAGCCCTCAGGTTGTGTGGGATTC...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGAGCACAGAAGGGTGGTaGTGTGGGCAGAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKSTEGW*CGQRGI
Trigger: AATACCCCTCTGCCCACAGCACCACCCTTCTGTGCT...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCACAGGTTTCACTCTGTTaGCCAGGTGTGGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSQVSLC*PGVVAQ
Trigger: CTGAGCCACCACACCTGGGCAACAGAGTGAAACCTG...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCGGGTTGAAGGGCTGCTaGGGGTCTACGCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPGLKGC*GSTLES
Trigger: AGACTCCAGCGTAGACCCCCAGCAGCCCTTCAACCC...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CCA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATATGGCAACGATGATCTaGGCCATGATGATCAACAGG +
Preference number: 4 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNMATMI*AMMINR
Trigger: CCTGTTGATCATCATGGCCCAGATCATCGTTGCCAT...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCAAGATCACAGGCCCATaGAATGCTGGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSKITGP*NAGARR
Trigger: CCTTCTGGCCCCAGCATTCCATGGGCCTGTGATCTT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CAGAAGGCGTCCAATGCATCCTCCAGTGTCCCACGAGGGTTTCCGCTGAAGGAGAACAACTTAGAACTTTaGGCCTCAGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QKASNASSSVPRGFPLKENNLEL*ASVSLS
Trigger: AGACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTT...CTCCTTCAGCGGAAACCCTCGTGGGACACTGGAGGATGCATTGGACGCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGAACAACTTAGAACTTTaGGCCTCAGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWNNLEL*ASVSLS
Trigger: AGACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATCTTAGTCTGTCATCTTaGGAGTTCTCTAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNLSLSS*EFSRQA
Trigger: TGCCTGCCTAGAGAACTCCCAAGATGACAGACTAAG...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTACCTTCTCTGGGGCATaGTTTCTTCATCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGTFSGA*FLHLFP
Trigger: TGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGCCATTTGCTTCTTCCTaGGACAGACACTGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEPFASS*DRHCGP
Trigger: TGGGCCACAGTGTCTGTCCCAGGAAGAAGCAAATGG...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
3UTR CAA 72 bp TATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCATGGAATGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: YFQWMGCYCFLR*VKITGPWNAGA
Trigger: GGCCCCAGCATTCCATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGATTCATAAAAACAATTaGCAAGGGCTGCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: STRVAVEASREPQLASLMIHKNN*QGLPGI
Trigger: AATTCCAGGCAGCCCTTGTCAATTGTTTTTATGAAT...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGGCATTCGGTGTTTTATaGCTGAGCTACCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLAFGVL*LSYPGE
Trigger: TTCTCCTGGGTAGCTCAGTCATAAAACACCGAATGC...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGCCTCAGAGGCTATTTTaGGGCAGGCATTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKPQRLF*GRHSVF
Trigger: AAACACCGAATGCCTGCCTCAAAATAGCCTCTGAGG...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGAGTGAATATGATCACTaGACCCCGCAGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLSEYDH*TPQHLE
Trigger: TTCCAGATGCTGCGGGGTGCAGTGATCATATTCACT...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGACCCCACAGAGACCTaGATGGGAGGTGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNDPTET*MGGGAT
Trigger: TGTGGCCCCACCTCCCATGCAGGTCTCTGTGGGGTC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAACATGCCCACTGCTTTaGCGAGAGCGTGTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSTCPLL*RERVDG
Trigger: TCCATCAACACGCTCTCGGCAAAGCAGTGGGCATGT...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGGCTGGGGGTCTACGCTaGAGTCTGATTGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQAGGLR*SLIALQ
Trigger: CTGCAGGGCAATCAGACTCCAGCGTAGACCCCCAGC...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGAAGGCCCAGAGCAACTaGGTAATGTGCTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKKAQSN*VMCWEL
Trigger: TAGCTCCCAGCACATTACCCAGTTGCTCTGGGCCTT...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGGGTATTTCCAGTGGATaGGCTGTTACTGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEGISSG*AVTVFS
Trigger: TGAGAAAACAGTAACAGCCCATCCACTGGAAATACC...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGAGGGGTATTTCCAGTaGATGGGCTGTTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSEGYFQ*MGCYCF
Trigger: AAAACAGTAACAGCCCATCCACTGGAAATACCCCTC...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGAATCATGTGGCTGCTaGACCTGGGGGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNESCGC*TWGSPR
Trigger: CCTGGGGGACCCCCAGGTCCAGCAGCCACATGATTC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GGGCCAGAAGGCACTAAGGCCACAGCATCAACATCTACTTCCCAGAGCATAACACTTAGTCTGTCATCTTaGGAGTTCTCTAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPEGTKATASTSTSQSITLSLSS*EFSRQA
Trigger: TGCCTGCCTAGAGAACTCCCAAGATGACAGACTAAG...TGTTATGCTCTGGGAAGTAGATGTTGATGCTGTGGCCTTAGTGCCTTCTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGACCTTCTCTGGGGCATaGTTTCTTCATCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRTFSGA*FLHLFP
Trigger: TGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGT...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGAATCCCACACAACCTaGGGGCTTCACTTGTCAACA +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSESHTT*GLHLST
Trigger: TGTTGACAAGTGAAGCCCTCAGGTTGTGTGGGATTC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCAGCACAGAAGGGTGGTaGTGTGGGCAGAGGGGTATT +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPSTEGW*CGQRGI
Trigger: AATACCCCTCTGCCCACAGCACCACCCTTCTGTGCT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGGCTACTCAGGGGACTTaGTTGAACCTGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQATQGT*LNLGAG
Trigger: TCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGC...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTACAATTGACAAGGGCTaGCTGGAATTTCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGTIDKG*LEFPCN
Trigger: ATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCAACATGCCCACTGCCTaGAGGAAGGGATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPNMPTA*RKGCWK
Trigger: CTTCCAGCATCCCTTCCTCCAGGCAGTGGGCATGTT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344420.10
CDS-3UTR CCA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGATGGCAACGATGATCTaGGCCATGATGATCAACAGG +
Preference number: 4 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKMATMI*AMMINR
Trigger: CCTGTTGATCATCATGGCCCAGATCATCGTTGCCAT...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGTCCTCTAGCACCATCTaGATGGCAACGATGATCTGG +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKSSSTI*MATMIW
Trigger: CCAGATCATCGTTGCCATCCAGATGGTGCTAGAGGA...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGGTATTTCCAGTGGATaGGCTGTTACTGTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEGISSG*AVTVFS
Trigger: TGAGAAAACAGTAACAGCCCATCCACTGGAAATACC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGTTGACAAGGGCTGCCTaGAATTTCCCTGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLLTRAA*NFPVIS
Trigger: AGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAA...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGTGCTGCAGAATCATGTaGCTGCTGGACCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQCCRIM*LLDLGV
Trigger: GACCCCCAGGTCCAGCAGCCACATGATTCTGCAGCA...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGSLNLL*GMVSSS
Trigger: AGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGA...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGAGCTACCCAGGAGAATaGTTTGAGGCCACACTCAAC +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKSYPGE*FEATLN
Trigger: GTTGAGTGTGGCCTCAAACCATTCTCCTGGGTAGCT...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCCCTGGGATTCAAAGCTaGTGGAATGGACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPPGIQS*WNGPSL
Trigger: GAGGGAGGGTCCATTCCACCAGCTTTGAATCCCAGG...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGTCTACGCTGGAGTCTaGTTGCCCTGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNVYAGV*LPCSSA
Trigger: TGCAGAGCTGCAGGGCAATCAGACTCCAGCGTAGAC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR TCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNSLSLC*LSCLLR
Trigger: CCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGA...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCAGTGAATATGATCACTaGACCCCGCAGCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSSEYDH*TPQHLE
Trigger: TTCCAGATGCTGCGGGGTGCAGTGATCATATTCACT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGTCAATGGCAACGATGATCTaGGCCATGATGATCAACAGG +
Preference number: 4 (lower is better)
Translates to: VWYQANLGWNTGSIKRKSMATMI*AMMINR
Trigger: CCTGTTGATCATCATGGCCCAGATCATCGTTGCCAT...TGACTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATAGGATCTGCAGTGCATaGAAGGCCTCCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNRICSA*KASQPS
Trigger: ACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCT...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGTGTTGTTATCTTCTGTaGCAGCAGCTGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQCCYLL*QQLPWG
Trigger: CCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACA...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGACAATAAACCAGGCATaGTGGTACATACCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWETINQA*WYIPVS
Trigger: ACTAACAGGTATGTACCACCATGCCTGGTTTATTGT...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGTCACTTAACCTTCTCTaGGGCATGGTTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLSLNLL*GMVSSS
Trigger: AGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGA...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATAGAAGGCAATGCTGCTaGTGTTGCCCAGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNRRQCC*CCPAVP
Trigger: TGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCT...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGAGGATCTGCAGTGCATaGAAGGCCTCCCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRRICSA*KASQPS
Trigger: ACTGGGCTGGGAGGCCTTCCATGCACTGCAGATCCT...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWEKKRT*VLLSSV
Trigger: CACAGAAGATAACAACACCCAAGTCCTCTTTTTCTC...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGACAATAAACCAGGCATaGTGGTACATACCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWTINQA*WYIPVS
Trigger: ACTAACAGGTATGTACCACCATGCCTGGTTTATTGT...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGAAGACAACAGTACATaGGGCTTCCAGCCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSREDNST*GFQPSP
Trigger: AGGGCTGGGCTGGAAGCCTCATGTACTGTTGTCTTC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCACAATTGACAAGGGCTaGCTGGAATTTCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EGRRLHLPNNLELWASVSTIDKG*LEFPCN
Trigger: ATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCATGTCACAGAGCGCTaGGGGCAGGAAAAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRHVTER*GQEKKR
Trigger: CCTCTTCTTTTCCTGCCCCCAGCGCTCTGTGACATG...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGCAGCATCTGGAAGCTaGAGGCACTGGTCATGTTCA +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNAASGS*RHWSCS
Trigger: TGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ACAATTGACAAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGAGAAAAAGAGGACTTaGGTGTTGTTATCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TIDKGCLEFPCNLFQAEEEKKRT*VLLSSV
Trigger: CACAGAAGATAACAACACCCAAGTCCTCTTTTTCTC...CTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGAAGATCACAGGCCCATaGAATGCTGGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRKITGP*NAGARR
Trigger: CCTTCTGGCCCCAGCATTCCATGGGCCTGTGATCTT...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGGAAGCTGGAGGCACTaGTCATGTTCAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRGSWRH*SCSELE
Trigger: CTCCAGCTCTGAACATGACCAGTGCCTCCAGCTTCC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414029.1
CDS-3UTR TCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATCCTCAGAGGCTATTTTaGGGCAGGCATTCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNPQRLF*GRHSVF
Trigger: AAACACCGAATGCCTGCCTCAAAATAGCCTCTGAGG...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGGCCAACTGCCCGCAGTaGGTGCACATTGTGTTTGTA +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRANCPQ*VHIVFV
Trigger: TACAAACACAATGTGCACCCACTGCGGGCAGTTGGC...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCACTGTTTTCTCAGGTTaGTCAAGATCACAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPTVFSG*SRSQAH
Trigger: ATGGGCCTGTGATCTTGACCAACCTGAGAAAACAGT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGACAATAAACCAGGCATaGTGGTACATACCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKTINQA*WYIPVS
Trigger: ACTAACAGGTATGTACCACCATGCCTGGTTTATTGT...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGATGCTTAGTTATGGCTaGGTGTGGTGTCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: IILNGRILLSLSSWEFSRMLSYG*VWCLTP
Trigger: AGGCGTGAGACACCACACCCAGCCATAACTAAGCAT...CCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGTTGACAAGGGCTGCCTaGAATTTCCCTGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQLTRAA*NFPVIS
Trigger: AGAGATTACAGGGAAATTCCAGGCAGCCCTTGTCAA...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR GCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATCAAGCTGTAATAACCTaGTGGAATCCCACACAACCT +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNQAVIT*WNPTQP
Trigger: AGGTTGTGTGGGATTCCAGCAGGTTATTACAGCTTG...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATGAGGGGTATTTCCAGTaGATGGGCTGTTACTGTTTT +
Preference number: 4 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNEGYFQ*MGCYCF
Trigger: AAAACAGTAACAGCCCATCCACTGGAAATACCCCTC...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCAACAACTTAGAACTTTaGGCCTCAGTTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPNNLEL*ASVSLS
Trigger: AGACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR TCA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCATTCATAAAAACAATTaGCAAGGGCTGCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPIHKNN*QGLPGI
Trigger: AATTCCAGGCAGCCCTTGTCAATTGTTTTTATGAAT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS CCA 90 bp GGCCAGGAACAGCTGGTACTTGGTCCAGGCCATGTCGGCGGACGCTaGGGTTCGCTCCAGTTAGCGGCGCCGGGCCCCGTCACCCGGGGT +
Preference number: 5 (lower is better)
Translates to: GQEQLVLGPGHVGGR*GSLQLAAPGPVTRG
Trigger: ACCCCGGGTGACGGGGCCCGGCGCCGCTAACTGGAGCGAACCCCAGCGTCCGCCGACATGGCCTGGACCAAGTACCAGCTGTTCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000429494.5
ENST00000482746.1
CDS-3UTR CAA 90 bp GGAGGGGTCCAGAGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GGVQRAEVCHCTQACGGWVALSS*VTLMPA
Trigger: CGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCAC...CCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCTCTGGACCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCGGACAGGGTGAGGCCTaGGGGATAGGGCATTCGGGG +
Preference number: 5 (lower is better)
Translates to: GIIDGSAGATQQSLLLALGQGEA*GIGHSG
Trigger: CCCCGAATGCCCTATCCCCAAGGCCTCACCCTGTCC...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS CCA 90 bp GTGTTGATGGAGCCGGTAACAAGCATGAGCCCGGCCAGGAACAGCTaGTACTTGGTCCAGGCCATGTCGGCGGACGCTGGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: VLMEPVTSMSPARNS*YLVQAMSADAGVRS
Trigger: GGAGCGAACCCCAGCGTCCGCCGACATGGCCTGGACCAAGTACCAGCTGTTCCTGGCCGGGCTCATGCTTGTTACCGGCTCCATCAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
ENST00000482746.1
CDS-3UTR CAA 90 bp GGCATCATTGATGGGAGTGCGGGTGCCACCCAGCAGTCTCTCCTGCTCGCTCTCGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GIIDGSAGATQQSLLLALVALSS*VTLMPA
Trigger: CGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCAC...GAGAGCGAGCAGGAGAGACTGCTGGGTGGCACCCGCACTCCCATCAATGATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGGGGACAGGGTGAGGCCTaGGGGATAGGGCATTCGGGG +
Preference number: 5 (lower is better)
Translates to: SSPALGDPSQRPHRDLHGGQGEA*GIGHSG
Trigger: CCCCGAATGCCCTATCCCCAAGGCCTCACCCTGTCC...CCCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 5 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS GCA 90 bp AGGGCTGCTGGGGGTCTACGCTGGAGTCTGATTGCCCTGCAGCTCTaGATCGGAGGAGGTAGAAGGCAGCCAGGCAGGAGAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RAAGGLRWSLIALQL*IGGGRRQPGRRILP
Trigger: TGGGAGAATTCTCCTGCCTGGCTGCCTTCTACCTCCTCCGATGCAGAGCTGCAGGGCAATCAGACTCCAGCGTAGACCCCCAGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CAA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 5 (lower is better)
Translates to: STRVAVEASREPQLASLMPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CTCCGGCCCAGGAAGGCCACCGAGAACAGGCCAGTGAATATGATCACTGCACCCACTCAGGGGACTTGCTaGAACCTGGGAGCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LRPRKATENRPVNMITAPTQGTC*NLGAGG
Trigger: ACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGT...GGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGTGGCCTTCCTGGGCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACGCAATGCTGCTGATGTaGCCCAGCAGTGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: HEASSPALGDPSQRPHRDAMLLM*PSSATA
Trigger: TGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGC...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGGGACAGGGTGAGGCCTaGGGGATAGGGCATTCGGGG +
Preference number: 5 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEGQGEA*GIGHSG
Trigger: CCCCGAATGCCCTATCCCCAAGGCCTCACCCTGTCC...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS TCA 90 bp GAAAAGAAGAGGGTTGAAGGGCTGCTGGGGGTCTACGCTGGAGTCTaGTTGCCCTGCAGCTCTGCATCGGAGGAGGTAGAAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: EKKRVEGLLGVYAGV*LPCSSASEEVEGSQ
Trigger: CTGGCTGCCTTCTACCTCCTCCGATGCAGAGCTGCAGGGCAATCAGACTCCAGCGTAGACCCCCAGCAGCCCTTCAACCCTCTTCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS-3UTR CAA 90 bp GCCTGTAGTCCCAGCTACTCAGGGGACTTGCTTGAACCTGGGAGCGGGAGGTTGTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: ACSPSYSGDLLEPGSGRLFAESV*MEPVTS
Trigger: GCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAA...CAACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGTAGCTGGGACTACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GACCTGGGGGTCCCCCAGGTCCTTGCAGGAGCTGAGGGTAGGAGACTCCATTTGCTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DLGVPQVLAGAEGRRLHLLMPAK*KKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAG...CAAATGGAGTCTCCTACCCTCAGCTCCTGCAAGGACCTGGGGGACCCCCAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS TCA 90 bp ATCACAAAGCCAAAGAGGCCTGTGATCACTTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGGAGGTCAGCCAGGCCCACGACCACC +
Preference number: 5 (lower is better)
Translates to: ITKPKRPVITSLSLC*LSCLLRRSARPTTT
Trigger: GGTGGTCGTGGGCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGCCTCTTTGGCTTTGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482746.1
CDS-3UTR CAA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGACAGGTTTCACTCTGTaGCCCAGGTGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: STRVAVEASREPQLASLMTGFTL*PRCGGS
Trigger: TGAGCCACCACACCTGGGCAACAGAGTGAAACCTGT...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CTCCGGCCCAGGAAGGCCACCGAGAACAGGCCAGTGAATATGATCACTGCACCCCCCTCAGAGGCTATTTaGAGGCAGGCATTCGGTGTT +
Preference number: 5 (lower is better)
Translates to: LRPRKATENRPVNMITAPPSEAI*RQAFGV
Trigger: AACACCGAATGCCTGCCTCAAAATAGCCTCTGAGGG...GGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGTGGCCTTCCTGGGCCGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGCCCTCGGCCATGAAATaGTCCGCCCATTTTGCCGAG +
Preference number: 5 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEPSAMK*SAHFAE
Trigger: CTCGGCAAAATGGGCGGACAATTTCATGGCCGAGGG...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS-3UTR CAA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGGCAATGCTGCTGATGTaGCCCAGCAGTGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWEAMLLM*PSSATA
Trigger: TGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGC...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CATGAGGCTTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HEASSPALGDPSQRPHRDLMPAK*KKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAG...GTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAAGCCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TGTGGGCAGAGGGGTATTTCCAGTGGATGGGCTGTTACTGTTTTCTCAGGTTGGGTGGCGCTCAGTTCCTaGGTGACGCTGATGCCTGCG +
Preference number: 5 (lower is better)
Translates to: CGQRGISSGWAVTVFSGWVALSS*VTLMPA
Trigger: CGCAGGCATCAGCGTCACCAAGGAACTGAGCGCCAC...CCAACCTGAGAAAACAGTAACAGCCCATCCACTGGAAATACCCCTCTGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AGAGCTGAGGTCTGCCACTGCACTCAGGCTTGTGGGGGCTGGGTAACACCACCCAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: RAEVCHCTQACGGWVTPPKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...GGGTGGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGGCAGACCTCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AAAAACAGCACAGAAGGGTGGTGCTGTGGGCAGAGGGGTATTTCCAGTGGATGGACTCAGGGGACTTGCTaGAACCTGGGAGCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: KNSTEGWCCGQRGISSGWTQGTC*NLGAGG
Trigger: ACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGT...CCATCCACTGGAAATACCCCTCTGCCCACAGCACCACCCTTCTGTGCTGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TACTTCCCAGAGCATAACACCAAGGCCCAGAGCAACTGGGTAATGTGCTGGGAGACTCAGGGGACTTGCTaGAACCTGGGAGCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: YFPEHNTKAQSNWVMCWETQGTC*NLGAGG
Trigger: ACCTCCCGCTCCCAGGTTCAAGCAAGTCCCCTGAGT...CTCCCAGCACATTACCCAGTTGCTCTGGGCCTTGGTGTTATGCTCTGGGAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS CCA 90 bp ACCGAGAACAGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGCTGGAGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: TENRPVNMITAPRSI*KLEALVMFRAGGRD
Trigger: ATCCCTTCCTCCAGCTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414029.1
CDS CCA 90 bp ACCGAGAACAGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGTTTGCCGAGAGCGT +
Preference number: 5 (lower is better)
Translates to: TENRPVNMITAPRSI*KLEALVMFRVCRER
Trigger: ACGCTCTCGGCAAACTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCTGTTCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482746.1
CDS-3UTR CAA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEFAESV*MEPVTS
Trigger: GCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAA...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp ACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTCCCTCGGCCATGAAATaGTCCGCCCATTTTGCCGAG +
Preference number: 5 (lower is better)
Translates to: TLMPAKLKKAMLLMLPSSPSAMK*SAHFAE
Trigger: CTCGGCAAAATGGGCGGACAATTTCATGGCCGAGGG...ACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414029.1
CDS-3UTR CAA 90 bp GTGGGTGCACATTGTGTTTGTAGACGAACTTCTCCTCTAGCACCATCTGGATGGCCACTGCACTCAGGCTaGTGGGGGCTGGGTAACACC +
Preference number: 5 (lower is better)
Translates to: VGAHCVCRRTSPLAPSGWPLHSG*WGLGNT
Trigger: GGTGTTACCCAGCCCCCACAAGCCTGAGTGCAGTGG...CCATCCAGATGGTGCTAGAGGAGAAGTTCGTCTACAAACACAATGTGCACCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTACCCAGGAGAATGGTTaGAGGCCACACTCAACTGTT +
Preference number: 5 (lower is better)
Translates to: KEHPGGSRSLQGTSAGIITQENG*RPHSTV
Trigger: AACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGT...AATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGCCCAGCAGTGCCACGGCAATTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGC +
Preference number: 5 (lower is better)
Translates to: CEVEEGNAADVAQQCHGNFAESV*MEPVTS
Trigger: GCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAA...ATTGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGCCTTCTTCAACTTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATTGATGAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: STRVAVEASREPQLASLMKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...CATCAATGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AGAAGGAGCACCCGGGTGGCAGTAGAAGCCTCCAGGGAACCTCAGCTGGCATCATGGGCCTCAGTTTCCTaGTCTTTAAAAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: RRSTRVAVEASREPQLASWASVS*SLKGTG
Trigger: ACCTGTTCCTTTTAAAGACAAGGAAACTGAGGCCCA...TGATGCCAGCTGAGGTTCCCTGGAGGCTTCTACTGCCACCCGGGTGCTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AAGGGCTGCCTGGAATTTCCCTGTAATCTCTTCCAGGCAGAGGAGGCCTCAGAGCCCTCAGAGGCTATTTaGAGGCAGGCATTCGGTGTT +
Preference number: 5 (lower is better)
Translates to: KGCLEFPCNLFQAEEASEPSEAI*RQAFGV
Trigger: AACACCGAATGCCTGCCTCAAAATAGCCTCTGAGGG...CTCTGAGGCCTCCTCTGCCTGGAAGAGATTACAGGGAAATTCCAGGCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCGCAATGCTGCTGATGTaGCCCAGCAGTGCCACGGCA +
Preference number: 5 (lower is better)
Translates to: EGRRLHLPNNLELWASVSAMLLM*PSSATA
Trigger: TGCCGTGGCACTGCTGGGCAACATCAGCAGCATTGC...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAACTGATGCCTGCGAAGTaGAAGAAGGCAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKLMPAK*KKAMLL
Trigger: CAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAG...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TTCCAGCCCAGCCCTAGGAGATCCATCCCAAAGACCCCACAGAGACCTGCATGGAAACAACTTAGAACTTaGGGCCTCAGTTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FQPSPRRSIPKTPQRPAWKQLRT*GLSFLV
Trigger: GACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTT...CCATGCAGGTCTCTGTGGGGTCTTTGGGATGGATCTCCTAGGGCTGGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GAAAAAGAGGACTTGGGTGTTGTTATCTTCTGTGGCAGCAGCTGCCCTGGGGGTTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCA +
Preference number: 5 (lower is better)
Translates to: EKEDLGVVIFCGSSCPGGYCFLR*VKITGP
Trigger: TGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTA...ACCCCCAGGGCAGCTGCTGCCACAGAAGATAACAACACCCAAGTCCTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCACAGGTTTCACTCTGTaGCCCAGGTGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: EGRRLHLPNNLELWASVSTGFTL*PRCGGS
Trigger: TGAGCCACCACACCTGGGCAACAGAGTGAAACCTGT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGACCCAGGAGAATGGTTaGAGGCCACACTCAACTGTT +
Preference number: 5 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRTQENG*RPHSTV
Trigger: AACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGT...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGCCCTCAGAGGCTATTTaGAGGCAGGCATTCGGTGTT +
Preference number: 5 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKPSEAI*RQAFGV
Trigger: AACACCGAATGCCTGCCTCAAAATAGCCTCTGAGGG...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GGAGAATGGTTTGAGGCCACACTCAACTGTTCCAAGGAGCAGCACTGGACCAAAAAGAGGACTTGGGTGTaGTTATCTTCTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GEWFEATLNCSKEQHWTKKRTWV*LSSVAA
Trigger: TGCTGCCACAGAAGATAACAACACCCAAGTCCTCTT...TTTGGTCCAGTGCTGCTCCTTGGAACAGTTGAGTGTGGCCTCAAACCATTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CCACAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCA +
Preference number: 5 (lower is better)
Translates to: PQVWYQANLGWNTGSIKRYCFLR*VKITGP
Trigger: TGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTA...CCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GTGAAACCCCATCTCTATAAAAGTTACCCAGGTGTGTTATGCACCTGTAATCCCACAGGTTTCACTCTGTaGCCCAGGTGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VKPHLYKSYPGVLCTCNPTGFTL*PRCGGS
Trigger: TGAGCCACCACACCTGGGCAACAGAGTGAAACCTGT...GGGATTACAGGTGCATAACACACCTGGGTAACTTTTATAGAGATGGGGTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp TCCTTGGTGACGCTGATGCCTGCGAAGTTGAAGAAGGCAATGCTGCTGATGTTGTGGGCCTCAGTTTCCTaGTCTTTAAAAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: SLVTLMPAKLKKAMLLMLWASVS*SLKGTG
Trigger: ACCTGTTCCTTTTAAAGACAAGGAAACTGAGGCCCA...CAACATCAGCAGCATTGCCTTCTTCAACTTCGCAGGCATCAGCGTCACCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp GAGGGTAGGAGACTCCATTTGCCAAACAACTTAGAACTTTGGGCCTCAGTTTCCACCCAGGAGAATGGTTaGAGGCCACACTCAACTGTT +
Preference number: 5 (lower is better)
Translates to: EGRRLHLPNNLELWASVSTQENG*RPHSTV
Trigger: AACAGTTGAGTGTGGCCTCAAACCATTCTCCTGGGT...GGAAACTGAGGCCCAAAGTTCTAAGTTGTTTGGCAAATGGAGTCTCCTACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp AGTCACTTAACCTTCTCTGGGGCATGGTTTCTTCATCTGTTCCCACCTCTGAAGTACTGTTTTCTCAGGTaGGTCAAGATCACAGGCCCA +
Preference number: 5 (lower is better)
Translates to: SHLTFSGAWFLHLFPPLKYCFLR*VKITGP
Trigger: TGGGCCTGTGATCTTGACCAACCTGAGAAAACAGTA...CTTCAGAGGTGGGAACAGATGAAGAAACCATGCCCCAGAGAAGGTTAAGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CAGGTCTGGTATCAGGCAAACCTAGGTTGGAACACTGGCTCCATAAAGAGGAAGAAACAACTTAGAACTTaGGGCCTCAGTTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: QVWYQANLGWNTGSIKRKKQLRT*GLSFLV
Trigger: GACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTT...CTTCCTCTTTATGGAGCCAGTGTTCCAACCTAGGTTTGCCTGATACCAGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp CCCATGTCTCCAGACGGGTTTAGGGAGGATCTTAGAAGTTTTAGAAAACATAATTGGGCCTCAGTTTCCTaGTCTTTAAAAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: PMSPDGFREDLRSFRKHNWASVS*SLKGTG
Trigger: ACCTGTTCCTTTTAAAGACAAGGAAACTGAGGCCCA...ATTATGTTTTCTAAAACTTCTAAGATCCTCCCTAAACCCGTCTGGAGACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS-3UTR CAA 90 bp ATTCTAAATGGCAGAATCCTACTTAGTCTGTCATCTTGGGAGTTCTCTAGGCAGAAACAACTTAGAACTTaGGGCCTCAGTTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: ILNGRILLSLSSWEFSRQKQLRT*GLSFLV
Trigger: GACAAGGAAACTGAGGCCCAAAGTTCTAAGTTGTTT...CTGCCTAGAGAACTCCCAAGATGACAGACTAAGTAGGATTCTGCCATTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000414029.1
ENST00000429494.5
CDS CCA 72 bp CAGCTGGTACTTGGTCCAGGCCATGTCGGCGGACGCTaGGGTTCGCTCCAGTTAGCGGCGCCGGGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: QLVLGPGHVGGR*GSLQLAAPGPV
Trigger: GACGGGGCCCGGCGCCGCTAACTGGAGCGAACCCCAGCGTCCGCCGACATGGCCTGGACCAAGTACCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344420.10
ENST00000429494.5
ENST00000482746.1
CDS CAA 72 bp TCCCAGGAACATGCCCACTGCTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGCATGAGCCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SQEHAHCFAESV*MEPVTSMSPAR
Trigger: CCTGGCCGGGCTCATGCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAAGCAGTGGGCATGTTCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429494.5
CDS TCA 72 bp AGGGTTGAAGGGCTGCTGGGGGTCTACGCTGGAGTCTaGTTGCCCTGCAGCTCTGCATCGGAGGAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: RVEGLLGVYAGV*LPCSSASEEVE
Trigger: TTCTACCTCCTCCGATGCAGAGCTGCAGGGCAATCAGACTCCAGCGTAGACCCCCAGCAGCCCTTCAACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000429494.5
CDS TCA 72 bp CCAAAGAGGCCTGTGATCACTTCGCTGAGCTTGTGCTaGCTGTCGTGCTTGCTCAGGAGGTCAGCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: PKRPVITSLSLC*LSCLLRRSARP
Trigger: GGGCCTGGCTGACCTCCTGAGCAAGCACGACAGTCAGCACAAGCTCAGCGAAGTGATCACAGGCCTCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482746.1
CDS CAA 72 bp GCCATGAAATTGTCCGCCCATTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGCATGAGCCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: AMKLSAHFAESV*MEPVTSMSPAR
Trigger: CCTGGCCGGGCTCATGCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAAATGGGCGGACAATTTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344420.10
ENST00000414029.1
CDS CAA 72 bp AGGCACTGGTCATGTTCAGAGTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGCATGAGCCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RHWSCSEFAESV*MEPVTSMSPAR
Trigger: CCTGGCCGGGCTCATGCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAACTCTGAACATGACCAGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482746.1
CDS CCA 72 bp TCACTGCACCCCGCAGCATCTGGAAGCTGGAGGCACTaGTCATGTTCAGAGTTTGCCGAGAGCGTGTTGATG +
Preference number: 6 (lower is better)
Translates to: SLHPAASGSWRH*SCSEFAESVLM
Trigger: CATCAACACGCTCTCGGCAAACTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482746.1
CDS CCA 72 bp AGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: RPVNMITAPRSI*KLEALVMFRAG
Trigger: TCCAGCTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414029.1
CDS CCA 72 bp AGGCCAGTGAATATGATCACTGCACCCCGCAGCATCTaGAAGCTGGAGGCACTGGTCATGTTCAGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: RPVNMITAPRSI*KLEALVMFRVC
Trigger: GCAAACTCTGAACATGACCAGTGCCTCCAGCTTCCAGATGCTGCGGGGTGCAGTGATCATATTCACTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482746.1