RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35F3 (Homo sapiens)

Ensembl gene IDs: ENSG00000183780

Ensembl transcript IDs: ENST00000366617.3, ENST00000366618.8

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGCATGATCTTACACAGACACGTGAGAGCAGGCCAGCCGGGGCTTaGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTC +
Preference number: 1 (lower is better)
Translates to: LHDLTQTRESRPAGA*TYLVLPGTWHRPVL
Trigger: GAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTGCTCTCACGTGTCTGTGTAAGATCATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR TCA 90 bp AAGCAAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATaGCCAAAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTC +
Preference number: 1 (lower is better)
Translates to: KQIGHANKYHRTYRR*PKLYRYVHLTQLRF
Trigger: GAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR GCA 90 bp ATGGAAACTGAGAATAATAATTTGCTAAAAAGTTCAGGTCATGAATaGCCCTTTCCCCCAGGAAACAGAAGACTCCATGGTTACAGAATG +
Preference number: 1 (lower is better)
Translates to: METENNNLLKSSGHE*PFPPGNRRLHGYRM
Trigger: CATTCTGTAACCATGGAGTCTTCTGTTTCCTGGGGGAAAGGGGCATTCATGACCTGAACTTTTTAGCAAATTATTATTCTCAGTTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CCA 90 bp TTTCCCCCAGGAAACAGAAGACTCCATGGTTACAGAATGCACCATTaGGTTATGACAACGTTTCAAAATAATGTTTCCATTTCATATGTA +
Preference number: 1 (lower is better)
Translates to: FPPGNRRLHGYRMHH*VMTTFQNNVSISYV
Trigger: TACATATGAAATGGAAACATTATTTTGAAACGTTGTCATAACCCAATGGTGCATTCTGTAACCATGGAGTCTTCTGTTTCCTGGGGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTCTTACACAGACACGTaGGAGCAGGCCAGCCGGGGC +
Preference number: 2 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHSYTDT*EQASRG
Trigger: GCCCCGGCTGGCCTGCTCTCACGTGTCTGTGTAAGA...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CAA 90 bp TTACACAGACACGTGAGAGCAGGCCAGCCGGGGCTTGGACTTATCTaGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTTTT +
Preference number: 2 (lower is better)
Translates to: LHRHVRAGQPGLGLI*SFLVPGTDLSSDSF
Trigger: AAAACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTGCTCTCACGTGTCTGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CAA 90 bp AGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATaGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCT +
Preference number: 2 (lower is better)
Translates to: SSQQFPSCTMYLIWV*YTAGHALYTLAISS
Trigger: AGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTCAAAACACTTGCCCTaGTGGCTGGCTTGTCAAGAA +
Preference number: 2 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLSKHLP*WLACQE
Trigger: TTCTTGACAAGCCAGCCATCAGGGCAAGTGTTTTGA...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCCTTAAGTGGAAGGTCTaGTGTGGAAAAGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLLKWKV*CGKVQA
Trigger: TGCTTGCACTTTTCCACATCAGACCTTCCACTTAAG...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACACTTGCCCTGATGGCTaGCTTGTCAAGAACGTCAGC +
Preference number: 2 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHTCPDG*LVKNVS
Trigger: GCTGACGTTCTTGACAAGCCAGCCATCAGGGCAAGT...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTCATCCATTTCTGCCTTaGCTCTTCACATCCCAGACA +
Preference number: 2 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSHPFLP*LFTSQT
Trigger: TGTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATG...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTCTTAAGTGGAAGGTCTaGTGTGGAAAAGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSLKWKV*CGKVQA
Trigger: TGCTTGCACTTTTCCACATCAGACCTTCCACTTAAG...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTAGAACTTACCGCAGATaGCCAAAACTGTACAGGTAT +
Preference number: 2 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSRTYRR*PKLYRY
Trigger: ATACCTGTACAGTTTTGGTCATCTGCGGTAAGTTCT...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACGTGGAAGGTCTGATGTaGAAAAGTGCAAGCAAATTG +
Preference number: 2 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHVEGLM*KSASKL
Trigger: CAATTTGCTTGCACTTTTCCACATCAGACCTTCCAC...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR TCA 90 bp GCACTGAGAGGTTCTTCTTTTCTCTTTTGTATTGAATTGGTACCCTTAAGTGGATACACCTTACCCAACTaGGGTTCCTCCCGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ALRGSSFLFCIELVPLSGYTLPN*GSSRQE
Trigger: TTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTA...TCCACTTAAGGGTACCAATTCAATACAAAAGAGAAAAGAAGAACCTCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR GCA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGAAGATTCAAAACACTTaGCCTGATGGCTGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLKIQNT*PDGWLV
Trigger: GACAAGCCAGCCATCAGGGCAAGTGTTTTGAATCTT...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CCA 72 bp CTTACACAGACACGTGAGAGCAGGCCAGCCGGGGCTTaGACTTATCTTGTCCTTCCTGGTACCTGGCACAGA +
Preference number: 3 (lower is better)
Translates to: LTQTRESRPAGA*TYLVLPGTWHR
Trigger: TCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTGCTCTCACGTGTCTGTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CCA 72 bp CAGGCCAGCCGGGGCTTGGACTTATCTTGTCCTTCCTaGTACCTGGCACAGACCTGTCCTCTGACAGTTTTT +
Preference number: 3 (lower is better)
Translates to: QASRGLDLSCPS*YLAQTCPLTVF
Trigger: AAAAACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTTCATCCATTTCTGCCTaGCCTCTTCACATCCCAGAC +
Preference number: 3 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSSSISA*PLHIPD
Trigger: GTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATGA...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCCTCTTTTGTATTGAATaGGTACCCTTAAGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLLFCIE*VPLSGR
Trigger: CCTTCCACTTAAGGGTACCAATTCAATACAAAAGAG...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGTACCTTATATGGGTATaGTACACCGCGGGCCACGCT +
Preference number: 3 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLYLIWV*YTAGHA
Trigger: AGCGTGGCCCGCGGTGTACAATACCCATATAAGGTA...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGTCATCCATTTCTGCCTaGCCTCTTCACATCCCAGAC +
Preference number: 3 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLSSISA*PLHIPD
Trigger: GTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATGA...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR GCA 72 bp CTAAGATTCAAAACACTTGCTAAGATTCAAAACACTTaGCCTGATGGCTGGCTTGTCAAGAACGTCAGCCAT +
Preference number: 3 (lower is better)
Translates to: LRFKTLAKIQNT*PDGWLVKNVSH
Trigger: ATGGCTGACGTTCTTGACAAGCCAGCCATCAGGGCAAGTGTTTTGAATCTTAGCAAGTGTTTTGAATCTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACAAAAGTGCAAGCAAATaGGACATGCCAATAAATACC +
Preference number: 3 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHKSASK*DMPINT
Trigger: GGTATTTATTGGCATGTCCAATTTGCTTGCACTTTT...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR TCA 72 bp GGACATGCCAATAAATACCATAGAACTTACCGCAGATaGCCAAAACTGTACAGGTATGTACACCTTACCCAA +
Preference number: 3 (lower is better)
Translates to: GHANKYHRTYRR*PKLYRYVHLTQ
Trigger: TTGGGTAAGGTGTACATACCTGTACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR GCA 72 bp GAGAATAATAATTTGCTAAAAAGTTCAGGTCATGAATaGCCCTTTCCCCCAGGAAACAGAAGACTCCATGGT +
Preference number: 3 (lower is better)
Translates to: ENNNLLKSSGHE*PFPPGNRRLHG
Trigger: ACCATGGAGTCTTCTGTTTCCTGGGGGAAAGGGGCATTCATGACCTGAACTTTTTAGCAAATTATTATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR-3UTR CAA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGAAAAGTGCAAGCAAATaGGACATGCCAATAAATACC +
Preference number: 3 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLKSASK*DMPINT
Trigger: GGTATTTATTGGCATGTCCAATTTGCTTGCACTTTT...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CCA 72 bp GGAAACAGAAGACTCCATGGTTACAGAATGCACCATTaGGTTATGACAACGTTTCAAAATAATGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: GNRRLHGYRMHH*VMTTFQNNVSI
Trigger: AATGGAAACATTATTTTGAAACGTTGTCATAACCCAATGGTGCATTCTGTAACCATGGAGTCTTCTGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCCACCGGCCCGCTGGTaGGATCCTCCACGGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHPPARW*DPPRSA
Trigger: CGCGCTCCGTGGAGGATCTCACCAGCGGGCCGGTGG...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCCGCCGGGCTCCGGTTaGCGCGTTGCTCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHPPGSG*RVAHCG
Trigger: GCCGCAGTGAGCAACGCGGCAACCGGAGCCCGGCGG...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR TCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGCACACCGCAGGCGTaGGTCTCGCCGCGACCGGGA +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDSTPQA*VSPRPG
Trigger: TCCCGGTCGCGGCGAGACTCACGCCTGCGGTGTGCT...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTGCTTGGCGAGCTGCGTaGAGCCCGCCCACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCAWRAA*SPPTRS
Trigger: GCTCCTCGTGGGCGGGCTCCACGCAGCTCGCCAAGC...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTGCTCCTCGATGGACGTaGGCCCCACCGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSAPRWT*APPARW
Trigger: CCAGCGGGCCGGTGGGGCTCACGTCCATCGAGGAGC...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACGTCAGCTTGGCGAGCTaGGTGGAGCCCGCCCACGAG +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDVSLAS*VEPAHE
Trigger: CTCGTGGGCGGGCTCCACGCAGCTCGCCAAGCTGAC...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTTGCCGCGTTGCTCACTaGGGCGGCCGCCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSCRVAH*GGRPAA
Trigger: CGCTGCAGGGCGGCCGCCGCAGTGAGCAACGCGGCA...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTCGATCGCCTACATCCTaGGGCCGGCTGGAGCGCGTC +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCRSPTS*GRLERV
Trigger: GACGCGCTCCAGCCGGCCCCAGGATGTAGGCGATCG...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR TCA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTACAGTCTCCGGGGGCTaGCGTCCGGTGACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVTVSGG*RPVTSS
Trigger: TGAGGAGGTCACCGGACGTCAGCCCCCGGAGACTGT...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTCTTGCTCTGAGGTCCTaGGCTCAGGTCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCLALRS*AQVGSA
Trigger: GGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAG...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCGAGCCCTCCCAGCTGTaGGCTCTCGAGGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLEPSQL*ALEAPG
Trigger: ACCAGGTGCCTCGAGAGCGCACAGCTGGGAGGGCTC...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACCCCCGGGCCGCTTTGTaGGCGCCCGCGCGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHPRAAL*APARSV
Trigger: TACAGACCGCGCGGGCGCGCACAAAGCGGCCCGGGG...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCCAGTGCGATGCCGATaGCGGAGTGGCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHPVRCR*RSGCGS
Trigger: GCTTCCACAGCCACTCCGTCATCGGCATCGCACTGG...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAAAGACTGGAGTGCGCTaGCCACCGAGGGTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTKTGVR*PPRVCA
Trigger: GGCGCAGACCCTCGGTGGGCAGCGCACTCCAGTCTT...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGGCGCTCCTCCCTTTTaGAGCTCGCTGCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTGAPPF*SSLPRA
Trigger: AGCCCTGGGCAGCGAGCTGCAAAAGGGAGGAGCGCC...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTCGCCTGCAGGAGCGCTaGCGCCGATCGCCTACATCC +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSRLQER*RRSPTS
Trigger: GGATGTAGGCGATCGGCGGCAGCGCTCCTGCAGGCG...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCTAGCCTGGGAAGACTaGAGTGCGCTGCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFLAWED*SALPTE
Trigger: CTCGGTGGGCAGCGCACTCCAGTCTTCCCAGGCTAG...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACCTGCAGCCGCTAGCCTaGGAAGACTGGAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDLQPLA*EDWSAL
Trigger: CAGCGCACTCCAGTCTTCCCAGGCTAGCGGCTGCAG...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCGCGCGTCGAACTTCCTaGAGGTCAGCTTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLARRTS*RSAWRA
Trigger: AGCTCGCCAAGCTGACCTTCAGGAAGTTCGACGCGC...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACGCGCGTCGAACTTCCTaGAGGTCAGCTTGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDARRTS*RSAWRA
Trigger: AGCTCGCCAAGCTGACCTTCAGGAAGTTCGACGCGC...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTGGCAGACATCGATGCTaGGGCCACCACCAGTGCGAT +
Preference number: 4 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVGRHRC*GHHQCD
Trigger: ATCGCACTGGTGGTGGCCTCAGCATCGATGTCTGCC...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTCAACGGCAATGCTCTTaGCCCTGGGTGCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSQRQCS*PWVRRW
Trigger: CCAGCGGCGCACCCAGGGGCAAGAGCATTGCCGTTG...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGATGAGCCGGCCGCCTaGAGGAGCGCTGCCGCCGAT +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIDEPAA*RSAAAD
Trigger: ATCGGCGGCAGCGCTCCTGCAGGCGGCCGGCTCATC...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCTTGAGCTGCCGGAGCTaGGGGCTGATGTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFLSCRS*GLMSDS
Trigger: ACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAA...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCAGCGATGGCGAGGATaGCGGCCACAATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHQRWRG*RPQSSL
Trigger: GAGTGAGGATTGTGGCCGCCATCCTCGCCATCGCTG...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACGCCGGAGCTGGGGGCTaGTGTCGGACAGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHAGAGG*CRTVSG
Trigger: CCCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGC...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACCCACCACCAAGTACTTaGGCTGCCGGAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHPPPST*AAGAGG
Trigger: GCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGG...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACATAAGACGGCGCCAGTaGCGTATCACGTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDIRRRQ*RITSPR
Trigger: GCGAGGTGACGTGATACGTCACTGGCGCCGTCTTAT...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCATAAGACGGCGCCAGTaGCGTATCACGTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLIRRRQ*RITSPR
Trigger: GCGAGGTGACGTGATACGTCACTGGCGCCGTCTTAT...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACCTCCGGTTGCCGCGTTaGTCACTGCGGCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYLRLPR*SLRRPP
Trigger: GGGCGGCCGCCGCAGTGAGCAACGCGGCAACCGGAG...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACATGCCGATGACGGAGTaGCTGTGGAAGCCATCAGCG +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHMPMTE*LWKPSA
Trigger: CGCTGATGGCTTCCACAGCCACTCCGTCATCGGCAT...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCTCATGCCAACGGCAATaGTCTTGCCCCTGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLSCQRQ*SCPWVR
Trigger: GCGCACCCAGGGGCAAGAGCATTGCCGTTGGCATGA...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAACCAAGTACTTGAGCTaGCGGAGCTGGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTTKYLS*RSWGLM
Trigger: CATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGT...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACGTCAGCTTGGCGAGCTaGGTGGAGCCCGCCCACGAG +
Preference number: 4 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHVSLAS*VEPAHE
Trigger: CTCGTGGGCGGGCTCCACGCAGCTCGCCAAGCTGAC...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACGCTTGGCGAGCTGCGTaGAGCCCGCCCACGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYAWRAA*SPPTRS
Trigger: GCTCCTCGTGGGCGGGCTCCACGCAGCTCGCCAAGC...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTCAGCGATGGCGAGGATaGCGGCCACAATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSQRWRG*RPQSSL
Trigger: GAGTGAGGATTGTGGCCGCCATCCTCGCCATCGCTG...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGCCCAGGAGGAGCTTaGACAAAACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLCPGGA*TKPCRG
Trigger: CCCTCTACAAGGTTTTGTTCAAGCTCCTCCTGGGCA...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGGACTGTTGCAGGCGCTaGGCGGGGCCACCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLDCCRR*AGPPGP
Trigger: CGGCCCGGGTGGCCCCGCTCAGCGCCTGCAACAGTC...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR GCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATACTGGGAAGACTGGAGTaGGCTGCCCACCGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGILGRLE*AAHRGS
Trigger: AGACCCTCGGTGGGCAGCGCACTCCAGTCTTCCCAG...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCAGGTCATCATCACAATaGCAGCGATGGCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFRSSSQ*QRWRGW
Trigger: CCATCCTCGCCATCGCTGGCATTGTGATGATGACCT...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCTCACAATGCCAGCGATaGCGAGGATGGCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLSQCQR*RGWRPQ
Trigger: TTGTGGCCGCCATCCTCGCCATCGCTGGCATTGTGA...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTACTTGCCCTGATGGCTaGCTTGTCAAGAACGTCAGC +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCTCPDG*LVKNVS
Trigger: GCTGACGTTCTTGACAAGCCAGCCATCAGGGCAAGT...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTGGGGCTGACGTCCGGTaGCCTCCTCATGCCAACGGC +
Preference number: 4 (lower is better)
Translates to: TSAIQNDLRRELLNPLYIGADVR*PPHANG
Trigger: GCCGTTGGCATGAGGAGGTCACCGGACGTCAGCCCC...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR TCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATACCCAGAAGATCTTCTTaGGTTGCGCCCGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIPRRSS*VAPGST
Trigger: CGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGG...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTTACACCTTACCCAACTaGGGTTCCTCCCGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSYTLPN*GSSRQE
Trigger: TTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTA...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCAGTTCAGGTCATGAATaGCCCTTTCCCCCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLSSGHE*PFPPGN
Trigger: GTTTCCTGGGGGAAAGGGGCATTCATGACCTGAACT...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTCACAATGCCAGCGATaGCGAGGATGGCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHSQCQR*RGWRPQ
Trigger: TTGTGGCCGCCATCCTCGCCATCGCTGGCATTGTGA...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCAGGCCAGCCGGGGCTTaGACTTATCTTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLRPAGA*TYLVLP
Trigger: AGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCT...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
3UTR CAA 72 bp CAATTCCCCTCCTGCACAATGTACCTTATATGGGTATaGTACACCGCGGGCCACGCTCTGTATACACTGGCC +
Preference number: 4 (lower is better)
Translates to: QFPSCTMYLIWV*YTAGHALYTLA
Trigger: GGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCTGAGAACGATCCATaGGAGCAAGAACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVPENDP*EQEHKS
Trigger: GCTTTTGTGTTCTTGCTCTCATGGATCGTTCTCAGG...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACCCAGTGCGATGCCGATaGCGGAGTGGCTGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYPVRCR*RSGCGS
Trigger: GCTTCCACAGCCACTCCGTCATCGGCATCGCACTGG...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCTGCCCAGGAGGAGCTTaGACAAAACCTTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLCPGGA*TKPCRG
Trigger: CCCTCTACAAGGTTTTGTTCAAGCTCCTCCTGGGCA...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTCTTGCTCTGAGGTCCTaGGCTCAGGTCGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TSAIQNDLRRELLNPLYILALRS*AQVGSA
Trigger: GGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAG...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTTCAAAACACTTGCCCTaGTGGCTGGCTTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCSKHLP*WLACQE
Trigger: TTCTTGACAAGCCAGCCATCAGGGCAAGTGTTTTGA...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTCGGCGTGCGGCACGATaGAGGCGCGGCGGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCRRAAR*RRGGSA
Trigger: GGCTGAACCGCCGCGCCTGCATCGTGCCGCACGCCG...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACAAGATCTTCTTGAGTTaGGCCCGGGAGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHKIFLS*AREHVQ
Trigger: CTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTT...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCGGGCTCTTCTGTTCTTaGTCTGAGGTCCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLGLFCS*SEVLSS
Trigger: TGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCC...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTGGGCTCTTCTGTTCTTaGTCTGAGGTCCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSGLFCS*SEVLSS
Trigger: TGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCC...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCATCCATTTCTGCCTTaGCTCTTCACATCCCAGACA +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFHPFLP*LFTSQT
Trigger: TGTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATG...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATACAATGCTCTTGCCCCTaGGTGCGCCGCTGGGAAACT +
Preference number: 4 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHIQCSCP*VRRWET
Trigger: AGTTTCCCAGCGGCGCACCCAGGGGCAAGAGCATTG...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACTTATCTTGTCCTTCCTaGTACCTGGCACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDLSCPS*YLAQTC
Trigger: ACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAA...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACATCAAAACACTTGCCCTaGTGGCTGGCTTGTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTSKHLP*WLACQE
Trigger: TTCTTGACAAGCCAGCCATCAGGGCAAGTGTTTTGA...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACACATTCCCTGTATCGCTaGTTCACAGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTHSLYR*FTDCFS
Trigger: AGAGAAGCAGTCTGTGAAGCAGCGATACAGGGAATG...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAAGATTCAAAACACTTaGCCTGATGGCTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDKIQNT*PDGWLV
Trigger: GACAAGCCAGCCATCAGGGCAAGTGTTTTGAATCTT...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCCAGCAATTCCCCTCCTaGACAATGTACCTTATATGG +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLQQFPS*TMYLIW
Trigger: CCATATAAGGTACATTGTGCAGGAGGGGAATTGCTG...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTCCCTGGGTGCGCCGCTaGGAAACTCTCGAATCCCCA +
Preference number: 4 (lower is better)
Translates to: TSAIQNDLRRELLNPLYIPWVRR*ETLESP
Trigger: TGGGGATTCGAGAGTTTCCCAGCGGCGCACCCAGGG...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATACAGACTGCTTCTCTGTaGACTTGCAGACGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIQTASL*TCRRAP
Trigger: TGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTG...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCACGCTCTGTATACACTaGCCATCAGCTCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLTLCIH*PSALSF
Trigger: AAATGACAGAGCTGATGGCCAGTGTATACAGAGCGT...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACACGCTCTGTATACACTaGCCATCAGCTCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHTLCIH*PSALSF
Trigger: AAATGACAGAGCTGATGGCCAGTGTATACAGAGCGT...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCACAATGTACCTTATATaGGTATTGTACACCGCGGGC +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFTMYLI*VLYTAG
Trigger: GCCCGCGGTGTACAATACCCATATAAGGTACATTGT...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCATTCACAGGTATGCTaGGGACGATTCCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLHSQVC*GRFQET
Trigger: TGTCTCTTGGAATCGTCCTCAGCATACCTGTGAATG...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTAGAACTTACCGCAGATaGCCAAAACTGTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCRTYRR*PKLYRY
Trigger: ATACCTGTACAGTTTTGGTCATCTGCGGTAAGTTCT...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GCACTGAGAGGTTCTTCTTTTCTCTTTTGTATTGAATTGGTACCCTTAAGTGGAGCTCTTGCCCCTGGGTaGGCCGCTGGGAAACTCTCG +
Preference number: 4 (lower is better)
Translates to: ALRGSSFLFCIELVPLSGALAPG*AAGKLS
Trigger: CGAGAGTTTCCCAGCGGCGCACCCAGGGGCAAGAGC...TCCACTTAAGGGTACCAATTCAATACAAAAGAGAAAAGAAGAACCTCTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTTCTGATGTGGAAAAGTaGAAGCAAATTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVSDVEK*KQIGHA
Trigger: GGCATGTCCAATTTGCTTGCACTTTTCCACATCAGA...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACCAGACTGCTTCTCTGTaGACTTGCAGACGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHQTASL*TCRRAP
Trigger: TGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTG...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTGTGGAAGGTCTGATGTaGAAAAGTGCAAGCAAATTG +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCVEGLM*KSASKL
Trigger: CAATTTGCTTGCACTTTTCCACATCAGACCTTCCAC...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACCTTCTGTTCTTGCTCTaGGGTCCTGAGCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYLLFLL*GPELRS
Trigger: CGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAG...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAAGAACTTACCGCAGATaGCCAAAACTGTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTRTYRR*PKLYRY
Trigger: ATACCTGTACAGTTTTGGTCATCTGCGGTAAGTTCT...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACGCTTCTCTGTGGACTTaGAGACGTGCCCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYASLWT*RRAPRS
Trigger: ACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGC...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAACACAAAAGCTTTGTTaGAGCAGAACAACACGGAGA +
Preference number: 4 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTTQKLC*SRTTRR
Trigger: TCTCCGTGTTGTTCTGCTGCAACAAAGCTTTTGTGT...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCACTGTGATTTCTCTTaGATGATCTTACACAGACAC +
Preference number: 4 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFHCDFS*MILHRH
Trigger: GTGTCTGTGTAAGATCATGCAAGAGAAATCACAGTG...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTATGCCGATGACGGAGTaGCTGTGGAAGCCATCAGCG +
Preference number: 4 (lower is better)
Translates to: TSAIQNDLRRELLNPLYIMPMTE*LWKPSA
Trigger: CGCTGATGGCTTCCACAGCCACTCCGTCATCGGCAT...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTACAAAGGTTTCCCCATaGAATGTCATCAAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCTKVSP*NVIKRA
Trigger: AGCTCTTTTGATGACATTCCATGGGGAAACCTTTGT...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACAGGCCAGCCGGGGCTTaGACTTATCTTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYRPAGA*TYLVLP
Trigger: AGGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCT...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCAAACAGAAGACTCCATaGTTACAGAATGCACCATTG +
Preference number: 4 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLKQKTP*LQNAPL
Trigger: CAATGGTGCATTCTGTAACCATGGAGTCTTCTGTTT...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGCCCAGAAGATCTTCTTaGGTTGCGCCCGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLPRRSS*VAPGST
Trigger: CGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGG...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATACATTCACAGGTATGCTaGGGACGATTCCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIHSQVC*GRFQET
Trigger: TGTCTCTTGGAATCGTCCTCAGCATACCTGTGAATG...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTTCTTACACAGACACGTaGGAGCAGGCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCSYTDT*EQASRG
Trigger: GCCCCGGCTGGCCTGCTCTCACGTGTCTGTGTAAGA...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTTGCACCATTGGGTTATaGCAACGTTTCAAAATAATG +
Preference number: 4 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVCTIGL*QRFKIM
Trigger: CATTATTTTGAAACGTTGTCATAACCCAATGGTGCA...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACTGCACCATTGGGTTATaGCAACGTTTCAAAATAATG +
Preference number: 4 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDCTIGL*QRFKIM
Trigger: CATTATTTTGAAACGTTGTCATAACCCAATGGTGCA...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTACACAAAAGCTTTGTTaGAGCAGAACAACACGGAGA +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSTQKLC*SRTTRR
Trigger: TCTCCGTGTTGTTCTGCTGCAACAAAGCTTTTGTGT...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACAGGTCATCATCACAATaGCAGCGATGGCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYRSSSQ*QRWRGW
Trigger: CCATCCTCGCCATCGCTGGCATTGTGATGATGACCT...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTGTCGGCAGCGCCCTCTaGAGGCTCCTCCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCVGSAL*RLLLLP
Trigger: AGGAAGAAGGAGGAGCCTGCAGAGGGCGCTGCCGAC...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCTCTGATGTGGAAAAGTaGAAGCAAATTGGACATGCC +
Preference number: 4 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLSDVEK*KQIGHA
Trigger: GGCATGTCCAATTTGCTTGCACTTTTCCACATCAGA...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTGCCACCCGGGCCGAGTaGTTCTTCATGATGAGCCGG +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCATRAE*FFMMSR
Trigger: CCGGCTCATCATGAAGAAGCACTCGGCCCGGGTGGC...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CCA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTGTGGAAGGTCTGATGTaGAAAAGTGCAAGCAAATTG +
Preference number: 4 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSVEGLM*KSASKL
Trigger: CAATTTGCTTGCACTTTTCCACATCAGACCTTCCAC...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGCCTTTTGCAGCTCGCTaGCCAGGGCTGGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLPFAAR*PGLVAI
Trigger: TATGGCTACCAGCCCTGGGCAGCGAGCTGCAAAAGG...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR GCA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACCATTCCCTGTATCGCTaGTTCACAGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHHSLYR*FTDCFS
Trigger: AGAGAAGCAGTCTGTGAAGCAGCGATACAGGGAATG...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATACATCCATTTCTGCCTTaGCTCTTCACATCCCAGACA +
Preference number: 4 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHIHPFLP*LFTSQT
Trigger: TGTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATG...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAACAATGTACCTTATATaGGTATTGTACACCGCGGGC +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGITMYLI*VLYTAG
Trigger: GCCCGCGGTGTACAATACCCATATAAGGTACATTGT...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACCTTAAGTGGAAGGTCTaGTGTGGAAAAGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHLKWKV*CGKVQA
Trigger: TGCTTGCACTTTTCCACATCAGACCTTCCACTTAAG...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GCACTGAGAGGTTCTTCTTTTCTCTTTTGTATTGAATTGGTACCCTTAAGTGGAAAGATCTTCTTGAGTTaGGCCCGGGAGCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALRGSSFLFCIELVPLSGKIFLS*AREHVQ
Trigger: CTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTT...TCCACTTAAGGGTACCAATTCAATACAAAAGAGAAAAGAAGAACCTCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp GCACTGAGAGGTTCTTCTTTTCTCTTTTGTATTGAATTGGTACCCTTAAGTGGAGCTTCTCTGTGGACTTaGAGACGTGCCCCACGTAGT +
Preference number: 4 (lower is better)
Translates to: ALRGSSFLFCIELVPLSGASLWT*RRAPRS
Trigger: ACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGC...TCCACTTAAGGGTACCAATTCAATACAAAAGAGAAAAGAAGAACCTCTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACTTATCTTGTCCTTCCTaGTACCTGGCACAGACCTGT +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYLSCPS*YLAQTC
Trigger: ACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAA...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR TCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTCTTCTGTTCTTGCTCTaGGGTCCTGAGCTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCLLFLL*GPELRS
Trigger: CGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAG...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACAAGATTCAAAACACTTaGCCTGATGGCTGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYKIQNT*PDGWLV
Trigger: GACAAGCCAGCCATCAGGGCAAGTGTTTTGAATCTT...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTACAGAATGCACCATTaGGTTATGACAACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHYRMHH*VMTTFQ
Trigger: TTGAAACGTTGTCATAACCCAATGGTGCATTCTGTA...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAAAACAGAAGACTCCATaGTTACAGAATGCACCATTG +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIKQKTP*LQNAPL
Trigger: CAATGGTGCATTCTGTAACCATGGAGTCTTCTGTTT...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATACACTGTGATTTCTCTTaGATGATCTTACACAGACAC +
Preference number: 4 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHIHCDFS*MILHRH
Trigger: GTGTCTGTGTAAGATCATGCAAGAGAAATCACAGTG...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTACTTGCCCTGATGGCTaGCTTGTCAAGAACGTCAGC +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCTCPDG*LVKNVS
Trigger: GCTGACGTTCTTGACAAGCCAGCCATCAGGGCAAGT...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATATACAGAATGCACCATTaGGTTATGACAACGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIYRMHH*VMTTFQ
Trigger: TTGAAACGTTGTCATAACCCAATGGTGCATTCTGTA...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR GCA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGCAGCAATTCCCCTCCTaGACAATGTACCTTATATGG +
Preference number: 4 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLQQFPS*TMYLIW
Trigger: CCATATAAGGTACATTGTGCAGGAGGGGAATTGCTG...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATAATAATTTTTCAGTCTTaGTCAGGAAGTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHIIIFQS*SGSKSS
Trigger: GCTGCTTTTACTTCCTGACCAAGACTGAAAAATTAT...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CCA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTATAATTTTTCAGTCTTaGTCAGGAAGTAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLDMPINTIELTADDQNCIIFQS*SGSKSS
Trigger: GCTGCTTTTACTTCCTGACCAAGACTGAAAAATTAT...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 90 bp CCTCCGCGGCGTGCGGCACGATGCAGGCGCGGCGGTTCAGCCCGGTaGCTCCAGGCCGGCCCGCGCGCTCGCCGCAACGACCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPRRAARCRRGGSAR*LQAGPRARRNDPAA
Trigger: GGCTGCCGGGTCGTTGCGGCGAGCGCGCGGGCCGGCCTGGAGTCACCGGGCTGAACCGCCGCGCCTGCATCGTGCCGCACGCCGCGGAGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 90 bp CGGCTGGAGCGCGTCTCTCCCGGGCCCGTGGCCGACGCGGCCCTCTaGCGCCGGGGAGCACCAGCGGCTCGCCCCTCTCAGTCCCGGCCT +
Preference number: 5 (lower is better)
Translates to: RLERVSPGPVADAAL*RRGAPAARPSQSRP
Trigger: AGGCCGGGACTGAGAGGGGCGAGCCGCTGGTGCTCCCCGGCGGCAGAGGGCCGCGTCGGCCACGGGCCCGGGAGAGACGCGCTCCAGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS CCA 90 bp CGCCTACATCCTGGGGCCGGCTGGAGCGCGTCTCTCCCGGGCCCGTaGCCGACGCGGCCCTCTGCCGCCGGGGAGCACCAGCGGCTCGCC +
Preference number: 5 (lower is better)
Translates to: RLHPGAGWSASLPGP*PTRPSAAGEHQRLA
Trigger: GGCGAGCCGCTGGTGCTCCCCGGCGGCAGAGGGCCGCGTCGGCCACGGGCCCGGGAGAGACGCGCTCCAGCCGGCCCCAGGATGTAGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS TCA 90 bp CCCCACGCCCGTCACCGTCGCCGCCGCCCTAGCACACCGCAGGCGTaGGTCTCGCCGCGACCGGGAGAGCCCTCCCAGCTGTGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: PHARHRRRRPSTPQA*VSPRPGEPSQLCAL
Trigger: GAGAGCGCACAGCTGGGAGGGCTCTCCCGGTCGCGGCGAGACTCACGCCTGCGGTGTGCTAGGGCGGCGGCGACGGTGACGGGCGTGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 90 bp CTTTGTGCGCGCCCGCGCGGTCTGTACCCGAGCGCCTCCGCGGCGTaGGGCACGATGCAGGCGCGGCGGTTCAGCCCGGTGACTCCAGGC +
Preference number: 5 (lower is better)
Translates to: LCARPRGLYPSASAA*GTMQARRFSPVTPG
Trigger: GCCTGGAGTCACCGGGCTGAACCGCCGCGCCTGCATCGTGCCGCACGCCGCGGAGGCGCTCGGGTACAGACCGCGCGGGCGCGCACAAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 90 bp AGGACCGGACTGTTGCAGGCGCTGAGCGGGGCCACCCGGGCCGAGTaGTTCTTCATGATGAGCCGGCCGCCTGCAGGAGCGCTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RTGLLQALSGATRAE*FFMMSRPPAGALPP
Trigger: CGGCGGCAGCGCTCCTGCAGGCGGCCGGCTCATCATGAAGAAGCACTCGGCCCGGGTGGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS GCA 90 bp CACACGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTTGAGTTaGGCCCGGGAGCACGTCCAGCAGCGGCGACTCGCTCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: HTHSTTATPQKIFLS*AREHVQQRRLALPP
Trigger: CGGCGGGAGAGCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS GCA 90 bp AGGGTGAAGGGCGCGTCGAACTTCCTGAAGGTCAGCTTGGCGAGCTaGGTGGAGCCCGCCCACGAGGAGCACACGCACAGCACGACCGCC +
Preference number: 5 (lower is better)
Translates to: RVKGASNFLKVSLAS*VEPAHEEHTHSTTA
Trigger: GGCGGTCGTGCTGTGCGTGTGCTCCTCGTGGGCGGGCTCCACGCAGCTCGCCAAGCTGACCTTCAGGAAGTTCGACGCGCCCTTCACCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 90 bp AGGAGCACACGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTTaGGTTGCGCCCGGGAGCACGTCCAGCAGCGGCGACTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RSTRTARPPRPRRSS*VAPGSTSSSGDSLS
Trigger: GGAGAGCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCGTGTGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS GCA 90 bp AGGAGTGGTGTTAGCGGGCGAAGGAAGGGCGGGCTCTTCTGTTCTTaGTCTGAGGTCCTGAGCTCAGGTCGGCAGCGCCCTCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RSGVSGRRKGGLFCS*SEVLSSGRQRPLQA
Trigger: AGCCTGCAGAGGGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCCGCCCTTCCTTCGCCCGCTAACACCACTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 90 bp TCCTTAATCGCCTCGTCCACCACCAAGTACTTGAGCTGCCGGAGCTaGGGGCTGATGTCGGACAGTCTCCGGGGGCTGACGTCCGGTGAC +
Preference number: 5 (lower is better)
Translates to: SLIASSTTKYLSCRS*GLMSDSLRGLTSGD
Trigger: GTCACCGGACGTCAGCCCCCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGACGAGGCGATTAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CAA 90 bp TACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCGCTCCGGTTGCCGCGTaGCTCACTGCGGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: YRYVHLTQLRFLPAGIDLAPVAA*LTAAAA
Trigger: GGCGGCCGCCGCAGTGAGCAACGCGGCAACCGGAGC...GAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS GCA 90 bp TTCAGATCCTCCTTAATCGCCTCGTCCACCACCAAGTACTTGAGCTaGCGGAGCTGGGGGCTGATGTCGGACAGTCTCCGGGGGCTGACG +
Preference number: 5 (lower is better)
Translates to: FRSSLIASSTTKYLS*RSWGLMSDSLRGLT
Trigger: CGTCAGCCCCCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGACGAGGCGATTAAGGAGGATCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CAA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGGGCGCTCCTCCCTTTaGCAGCTCGCTGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTGRSSL*QLAAQG
Trigger: GCCCTGGGCAGCGAGCTGCAAAAGGGAGGAGCGCCC...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CAA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTTTCCTGAAGGTCAGCTaGGCGAGCTGCGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVFLKVS*ASCVEP
Trigger: GGGCTCCACGCAGCTCGCCAAGCTGACCTTCAGGAA...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACTTCCTGAAGGTCAGCTaGGCGAGCTGCGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDFLKVS*ASCVEP
Trigger: GGGCTCCACGCAGCTCGCCAAGCTGACCTTCAGGAA...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp TTACATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACCCCGCCGGGCTCCGGTaGCCGCGTTGCTCACTGCGG +
Preference number: 5 (lower is better)
Translates to: LHLNYKTAPVTYHVTSLHPAGLR*PRCSLR
Trigger: CCGCAGTGAGCAACGCGGCAACCGGAGCCCGGCGGG...GTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS TCA 90 bp AGAGGGCAGACATCGATGCTGAGGCCACCACCAGTGCGATGCCGATaGCGGAGTGGCTGTGGAAGCCATCAGCGTAGGTCATCATCACAA +
Preference number: 5 (lower is better)
Translates to: RGQTSMLRPPPVRCR*RSGCGSHQRRSSSQ
Trigger: TTGTGATGATGACCTACGCTGATGGCTTCCACAGCCACTCCGTCATCGGCATCGCACTGGTGGTGGCCTCAGCATCGATGTCTGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACATCCACCACCAAGTACTaGAGCTGCCGGAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GLDLSCPSWYLAQTCPLTSTTKY*SCRSWG
Trigger: CCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGA...TGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CAA 90 bp CCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCCCAGAAGATCTTCTaGAGTTGCGCCCGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: PTEVPPGRNRPPSHYHRVPQKIF*SCAREH
Trigger: GTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGG...AACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCCCCCAGAAGATCTTCTaGAGTTGCGCCCGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFPQKIF*SCAREH
Trigger: GTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGG...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCCAGGCCAGCCGGGGCTaGGACTTATCTTGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLQASRG*DLSCPS
Trigger: GGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTG...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp TCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCGAAGATCTTCTTGAGTaGCGCCCGGGAGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: SPPAQCTLYGYCTPRATLEDLLE*RPGARP
Trigger: TGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTC...GAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGCAGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 90 bp TTTGAGTCGGGTGAGCAGCTTGATCAACCAGACATCCCACTCCTCTaGCAGGAGCAGGAGGAGAAAACCCAGGCCGATGATGATGATGGC +
Preference number: 5 (lower is better)
Translates to: FESGEQLDQPDIPLL*QEQEEKTQADDDDG
Trigger: GCCATCATCATCATCGGCCTGGGTTTTCTCCTCCTGCTCCTGCCAGAGGAGTGGGATGTCTGGTTGATCAAGCTGCTCACCCGACTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCAGTCGGGTGAGCAGCTaGATCAACCAGACATCCCAC +
Preference number: 5 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFSRVSS*INQTSH
Trigger: GTGGGATGTCTGGTTGATCAAGCTGCTCACCCGACT...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTGGGCTTGGACTTATCTaGTCCTTCCTGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCGLGLI*SFLVPG
Trigger: GCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACTCCTTCTTCCTCACTTaGAGTCGGGTGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHSFFLT*SRVSSL
Trigger: CAAGCTGCTCACCCGACTCAAAGTGAGGAAGAAGGA...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCTACCTTATATGGGTATaGTACACCGCGGGCCACGCT +
Preference number: 5 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFYLIWV*YTAGHA
Trigger: AGCGTGGCCCGCGGTGTACAATACCCATATAAGGTA...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTGTCAGGACCGGACTGTaGCAGGCGCTGAGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: TSAIQNDLRRELLNPLYIVRTGL*QALSGA
Trigger: GGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCTGAC...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS-3UTR CAA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTGGGCTTGGACTTATCTaGTCCTTCCTGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSGLGLI*SFLVPG
Trigger: GCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACAGTCGGGTGAGCAGCTaGATCAACCAGACATCCCAC +
Preference number: 5 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHSRVSS*INQTSH
Trigger: GTGGGATGTCTGGTTGATCAAGCTGCTCACCCGACT...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACAGTTCCTTCTTCCTCACTTaGAGTCGGGTGAGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LGLILSFLVPGTDLSSDSSFFLT*SRVSSL
Trigger: CAAGCTGCTCACCCGACTCAAAGTGAGGAAGAAGGA...ACTGTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACCGAGTTCAACACAAAAGCTTTGTaGCAGCAGAACAACACGGAG +
Preference number: 5 (lower is better)
Translates to: QLRFLPAGIDLPVITTEFNTKAL*QQNNTE
Trigger: CTCCGTGTTGTTCTGCTGCAACAAAGCTTTTGTGTT...GAACTCGGTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CCTTACCCAACTGAGGTTCCTCCCGGCAGGAATAGACCTCCCAGTCATTACCACAACACAAAAGCTTTGTaGCAGCAGAACAACACGGAG +
Preference number: 5 (lower is better)
Translates to: PYPTEVPPGRNRPPSHYHNTKAL*QQNNTE
Trigger: CTCCGTGTTGTTCTGCTGCAACAAAGCTTTTGTGTT...GTGGTAATGACTGGGAGGTCTATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATATCCTCCCCTTCCACTTaGGTAAGGGTCAGGACCGGA +
Preference number: 5 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHISSPST*VRVRTG
Trigger: TCCGGTCCTGACCCTTACCAAAGTGGAAGGGGAGGA...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS GCA 90 bp AGCATTCCCTGTATCGCTGCTTCACAGACTGCTTCTCTGTGGACTTaGAGACGTGCCCCACGTAGTACAACGGGAAGAATAAAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SIPCIAASQTASLWT*RRAPRSTTGRIKSS
Trigger: GGAACTTTTTATTCTTCCCGTTGTACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTGTGAAGCAGCGATACAGGGAATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 90 bp ATCGACAGCATTCCCTGTATCGCTGCTTCACAGACTGCTTCTCTGTaGACTTGCAGACGTGCCCCACGTAGTACAACGGGAAGAATAAAA +
Preference number: 5 (lower is better)
Translates to: IDSIPCIAASQTASL*TCRRAPRSTTGRIK
Trigger: TTTTATTCTTCCCGTTGTACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTGTGAAGCAGCGATACAGGGAATGCTGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTCCAACGGCAATGCTCTaGCCCCTGGGTGCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KLDMPINTIELTADDQNCPTAML*PLGAPL
Trigger: CAGCGGCGCACCCAGGGGCAAGAGCATTGCCGTTGG...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS-3UTR CAA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACGAAGATCTTCTTGAGTaGCGCCCGGGAGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYEDLLE*RPGARP
Trigger: TGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTC...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp AAACTGTACAGGTATGTACACCTTACCCAACTGAGGTTCCTCCCGGCAGGAATATACCTTATATGGGTATaGTACACCGCGGGCCACGCT +
Preference number: 5 (lower is better)
Translates to: KLYRYVHLTQLRFLPAGIYLIWV*YTAGHA
Trigger: AGCGTGGCCCGCGGTGTACAATACCCATATAAGGTA...TATTCCTGCCGGGAGGAACCTCAGTTGGGTAAGGTGTACATACCTGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GGGCTTGGACTTATCTTGTCCTTCCTGGTACCTGGCACAGACCTGTCCTCTGACCTCTTTTGTATTGAATaGGTACCCTTAAGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLGLILSFLVPGTDLSSDLFCIE*VPLSGR
Trigger: CCTTCCACTTAAGGGTACCAATTCAATACAAAAGAG...GTCAGAGGACAGGTCTGTGCCAGGTACCAGGAAGGACAAGATAAGTCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp ATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACTGGCCATCAGCTCTGTTTACAGAATGCACCATaGGGTTATGACAACGTTTCA +
Preference number: 5 (lower is better)
Translates to: MGIVHRGPRSVYTGHQLCLQNAP*GYDNVS
Trigger: TGAAACGTTGTCATAACCCAATGGTGCATTCTGTAA...ACAGAGCTGATGGCCAGTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACAATAAAAAGTTCCAGTaGGTGGCAAACCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHNKKFQ*VANHVR
Trigger: CCTCACGTGGTTTGCCACCAACTGGAACTTTTTATT...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp GCACAATGTACCTTATATGGGTATTGTACACCGCGGGCCACGCTCTGTATACACAAGAACACAAAAGCTTaGTTGCAGCAGAACAACACG +
Preference number: 5 (lower is better)
Translates to: AQCTLYGYCTPRATLCIHKNTKA*LQQNNT
Trigger: CGTGTTGTTCTGCTGCAACAAAGCTTTTGTGTTCTT...GTGTATACAGAGCGTGGCCCGCGGTGTACAATACCCATATAAGGTACATTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp AAAAGCAGCCAGCAATTCCCCTCCTGCACAATGTACCTTATATGGGTATTGTACTCATCCATTTCTGCCTaGCCTCTTCACATCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KSSQQFPSCTMYLIWVLYSSISA*PLHIPD
Trigger: GTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATGA...GTACAATACCCATATAAGGTACATTGTGCAGGAGGGGAATTGCTGGCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTCAGGCCAGCCGGGGCTaGGACTTATCTTGTCCTTCC +
Preference number: 5 (lower is better)
Translates to: KLDMPINTIELTADDQNCQASRG*DLSCPS
Trigger: GGAAGGACAAGATAAGTCCAAGCCCCGGCTGGCCTG...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATAAATAAAAAGTTCCAGTaGGTGGCAAACCACGTGAGG +
Preference number: 5 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHINKKFQ*VANHVR
Trigger: CCTCACGTGGTTTGCCACCAACTGGAACTTTTTATT...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CATCTAAATTATAAGACGGCGCCAGTGACGTATCACGTCACCTCGCTTCACATATTACAGAATGCACCATaGGGTTATGACAACGTTTCA +
Preference number: 5 (lower is better)
Translates to: HLNYKTAPVTYHVTSLHILQNAP*GYDNVS
Trigger: TGAAACGTTGTCATAACCCAATGGTGCATTCTGTAA...TATGTGAAGCGAGGTGACGTGATACGTCACTGGCGCCGTCTTATAATTTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp AAATTGGACATGCCAATAAATACCATAGAACTTACCGCAGATGACCAAAACTGTTCATCCATTTCTGCCTaGCCTCTTCACATCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KLDMPINTIELTADDQNCSSISA*PLHIPD
Trigger: GTCTGGGATGTGAAGAGGCAAGGCAGAAATGGATGA...ACAGTTTTGGTCATCTGCGGTAAGTTCTATGGTATTTATTGGCATGTCCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp ACGTCAGCCATCCAAAACGATCTACGCAGGGAACTTTTAAACCCACTTTACATTAAAAGTGCAAGCAAATaGGACATGCCAATAAATACC +
Preference number: 5 (lower is better)
Translates to: TSAIQNDLRRELLNPLYIKSASK*DMPINT
Trigger: GGTATTTATTGGCATGTCCAATTTGCTTGCACTTTT...AATGTAAAGTGGGTTTAAAAGTTCCCTGCGTAGATCGTTTTGGATGGCTGACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS-3UTR CAA 90 bp CTGACCCTCTTTACAGATCTATCACAGATAGAATTTTCTGGCAGACCTAAATTGCTCTTTTGTATTGAATaGGTACCCTTAAGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LTLFTDLSQIEFSGRPKLLFCIE*VPLSGR
Trigger: CCTTCCACTTAAGGGTACCAATTCAATACAAAAGAG...CAATTTAGGTCTGCCAGAAAATTCTATCTGTGATAGATCTGTAAAGAGGGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS GCA 72 bp CGCCCGCGCGGTCTGTACCCGAGCGCCTCCGCGGCGTaGGGCACGATGCAGGCGCGGCGGTTCAGCCCGGTG +
Preference number: 6 (lower is better)
Translates to: RPRGLYPSASAA*GTMQARRFSPV
Trigger: CACCGGGCTGAACCGCCGCGCCTGCATCGTGCCGCACGCCGCGGAGGCGCTCGGGTACAGACCGCGCGGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp GGCTGCCCGCCGGGCTCCGGTTGCCGCGTTGCTCACTaGGGCGGCCGCCCTGCAGCGCACATCCTCCCCGGC +
Preference number: 6 (lower is better)
Translates to: GCPPGSGCRVAH*GGRPAAHILPG
Trigger: GCCGGGGAGGATGTGCGCTGCAGGGCGGCCGCCGCAGTGAGCAACGCGGCAACCGGAGCCCGGCGGGCAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS TCA 72 bp CGTGCGGCACGATGCAGGCGCGGCGGTTCAGCCCGGTaGCTCCAGGCCGGCCCGCGCGCTCGCCGCAACGAC +
Preference number: 6 (lower is better)
Translates to: RAARCRRGGSAR*LQAGPRARRND
Trigger: GTCGTTGCGGCGAGCGCGCGGGCCGGCCTGGAGTCACCGGGCTGAACCGCCGCGCCTGCATCGTGCCGCACG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp CCTCCCCGGCTGCCCGCCGGGCTCCGGTTGCCGCGTTaGTCACTGCGGCGGCCGCCCTGCAGCGCACATCCT +
Preference number: 6 (lower is better)
Translates to: PPRLPAGLRLPR*SLRRPPCSAHP
Trigger: AGGATGTGCGCTGCAGGGCGGCCGCCGCAGTGAGCAACGCGGCAACCGGAGCCCGGCGGGCAGCCGGGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS GCA 72 bp CAGCGGCTCGCCCCTCTCAGTCCCGGCCTCCCCGGCTaGCCGCCGGGCTCCGGTTGCCGCGTTGCTCACTGC +
Preference number: 6 (lower is better)
Translates to: QRLAPLSPGLPG*PPGSGCRVAHC
Trigger: GCAGTGAGCAACGCGGCAACCGGAGCCCGGCGGGCAGCCGGGGAGGCCGGGACTGAGAGGGGCGAGCCGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS TCA 72 bp CGTCACCGTCGCCGCCGCCCTAGCACACCGCAGGCGTaGGTCTCGCCGCGACCGGGAGAGCCCTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: RHRRRRPSTPQA*VSPRPGEPSQL
Trigger: CAGCTGGGAGGGCTCTCCCGGTCGCGGCGAGACTCACGCCTGCGGTGTGCTAGGGCGGCGGCGACGGTGACG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS CCA 72 bp GGGGCCGCGGGCCGGAGCTCCCTGCAGCCGCTAGCCTaGGAAGACTGGAGTGCGCTGCCCACCGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: GAAGRSSLQPLA*EDWSALPTEGL
Trigger: CAGACCCTCGGTGGGCAGCGCACTCCAGTCTTCCCAGGCTAGCGGCTGCAGGGAGCTCCGGCCCGCGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp CTGTTGCAGGCGCTGAGCGGGGCCACCCGGGCCGAGTaGTTCTTCATGATGAGCCGGCCGCCTGCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: LLQALSGATRAE*FFMMSRPPAGA
Trigger: CGCTCCTGCAGGCGGCCGGCTCATCATGAAGAAGCACTCGGCCCGGGTGGCCCCGCTCAGCGCCTGCAACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS CAA 90 bp GCACACGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTTGAGTaGCGCCCGGGAGCACGTCCAGCAGCGGCGACTCGCTCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: AHAQHDRHAPEDLLE*RPGARPAAATRSPA
Trigger: GGCGGGAGAGCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS GCA 72 bp CCGGGCCGAGTGCTTCTTCATGATGAGCCGGCCGCCTaGAGGAGCGCTGCCGCCGATCGCCTACATCCTGGG +
Preference number: 6 (lower is better)
Translates to: PGRVLLHDEPAA*RSAAADRLHPG
Trigger: CCCAGGATGTAGGCGATCGGCGGCAGCGCTCCTGCAGGCGGCCGGCTCATCATGAAGAAGCACTCGGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS TCA 72 bp CGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTTaGGTTGCGCCCGGGAGCACGTCCAGCAGCGGCGAC +
Preference number: 6 (lower is better)
Translates to: RTARPPRPRRSS*VAPGSTSSSGD
Trigger: GTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 72 bp CAGCACGACCGCCACGCCCCAGAAGATCTTCTTGAGTaGCGCCCGGGAGCACGTCCAGCAGCGGCGACTCGC +
Preference number: 6 (lower is better)
Translates to: QHDRHAPEDLLE*RPGARPAAATR
Trigger: GCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 72 bp TCCCCTTCCACTTTGGTAAGGGTCAGGACCGGACTGTaGCAGGCGCTGAGCGGGGCCACCCGGGCCGAGTGC +
Preference number: 6 (lower is better)
Translates to: SPSTLVRVRTGL*QALSGATRAEC
Trigger: GCACTCGGCCCGGGTGGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCTGACCCTTACCAAAGTGGAAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS CAA 90 bp GAGGAGCACACGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTaGAGTTGCGCCCGGGAGCACGTCCAGCAGCGGCGACTCGCTCTC +
Preference number: 6 (lower is better)
Translates to: EEHTHSTTATPQKIF*SCAREHVQQRRLAL
Trigger: GAGAGCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCGTGTGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 90 bp GGGCGCTCCTCCCCTTCCACTTTGGTAAGGGTCAGGACCGGACTGTaGCAGGCGCTGAGCGGGGCCACCCGGGCCGAGTGCTTCTTCATG +
Preference number: 6 (lower is better)
Translates to: GRSSPSTLVRVRTGL*QALSGATRAECFFM
Trigger: CATGAAGAAGCACTCGGCCCGGGTGGCCCCGCTCAGCGCCTGCAACAGTCCGGTCCTGACCCTTACCAAAGTGGAAGGGGAGGAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366617.3
CDS GCA 72 bp AGCACGACCGCCACGCCCCAGAAGATCTTCTTGAGTTaGGCCCGGGAGCACGTCCAGCAGCGGCGACTCGCT +
Preference number: 6 (lower is better)
Translates to: STTATPQKIFLS*AREHVQQRRLA
Trigger: AGCGAGTCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 72 bp GCCTCGTCCACCACCAAGTACTTGAGCTGCCGGAGCTaGGGGCTGATGTCGGACAGTCTCCGGGGGCTGACG +
Preference number: 6 (lower is better)
Translates to: ASSTTKYLSCRS*GLMSDSLRGLT
Trigger: CGTCAGCCCCCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGACGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS CAA 72 bp ACGCACAGCACGACCGCCACGCCCCAGAAGATCTTCTaGAGTTGCGCCCGGGAGCACGTCCAGCAGCGGCGA +
Preference number: 6 (lower is better)
Translates to: THSTTATPQKIF*SCAREHVQQRR
Trigger: TCGCCGCTGCTGGACGTGCTCCCGGGCGCAACTCAAGAAGATCTTCTGGGGCGTGGCGGTCGTGCTGTGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 72 bp GGAAGGGCGGGCTCTTCTGTTCTTGCTCTGAGGTCCTaGGCTCAGGTCGGCAGCGCCCTCTGCAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GRAGSSVLALRS*AQVGSALCRLL
Trigger: GAGGAGCCTGCAGAGGGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCCGCCCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 72 bp CGGGCGAAGGAAGGGCGGGCTCTTCTGTTCTTGCTCTaGGGTCCTGAGCTCAGGTCGGCAGCGCCCTCTGCA +
Preference number: 6 (lower is better)
Translates to: RAKEGRALLFLL*GPELRSAAPSA
Trigger: TGCAGAGGGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCCGCCCTTCCTTCGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 72 bp GCTGATGTCGGACAGTCTCCGGGGGCTGACGTCCGGTaGCCTCCTCATGCCAACGGCAATGCTCTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: ADVGQSPGADVR*PPHANGNALAP
Trigger: AGGGGCAAGAGCATTGCCGTTGGCATGAGGAGGTCACCGGACGTCAGCCCCCGGAGACTGTCCGACATCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp CGTCCGGTGACCTCCTCATGCCAACGGCAATGCTCTTaGCCCTGGGTGCGCCGCTGGGAAACTCTCGAATCC +
Preference number: 6 (lower is better)
Translates to: RPVTSSCQRQCS*PWVRRWETLES
Trigger: GGATTCGAGAGTTTCCCAGCGGCGCACCCAGGGGCAAGAGCATTGCCGTTGGCATGAGGAGGTCACCGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp GTTAGCGGGCGAAGGAAGGGCGGGCTCTTCTGTTCTTaGTCTGAGGTCCTGAGCTCAGGTCGGCAGCGCCCT +
Preference number: 6 (lower is better)
Translates to: VSGRRKGGLFCS*SEVLSSGRQRP
Trigger: AGGGCGCTGCCGACCTGAGCTCAGGACCTCAGAGCAAGAACAGAAGAGCCCGCCCTTCCTTCGCCCGCTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 72 bp ACGTCCGGTGACCTCCTCATGCCAACGGCAATGCTCTaGCCCCTGGGTGCGCCGCTGGGAAACTCTCGAATC +
Preference number: 6 (lower is better)
Translates to: TSGDLLMPTAML*PLGAPLGNSRI
Trigger: GATTCGAGAGTTTCCCAGCGGCGCACCCAGGGGCAAGAGCATTGCCGTTGGCATGAGGAGGTCACCGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp TCCTTAATCGCCTCGTCCACCACCAAGTACTTGAGCTaGCGGAGCTGGGGGCTGATGTCGGACAGTCTCCGG +
Preference number: 6 (lower is better)
Translates to: SLIASSTTKYLS*RSWGLMSDSLR
Trigger: CCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGACGAGGCGATTAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS CAA 90 bp GACCATTTCAGATCCTCCTTAATCGCCTCGTCCACCACCAAGTACTaGAGCTGCCGGAGCTGGGGGCTGATGTCGGACAGTCTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: DHFRSSLIASSTTKY*SCRSWGLMSDSLRG
Trigger: CCCCCGGAGACTGTCCGACATCAGCCCCCAGCTCCGGCAGCTCAAGTACTTGGTGGTGGACGAGGCGATTAAGGAGGATCTGAAATGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366618.8
CDS GCA 72 bp GGCTGTGGAAGCCATCAGCGTAGGTCATCATCACAATaGCAGCGATGGCGAGGATGGCGGCCACAATCCTCA +
Preference number: 6 (lower is better)
Translates to: GCGSHQRRSSSQ*QRWRGWRPQSS
Trigger: TGAGGATTGTGGCCGCCATCCTCGCCATCGCTGGCATTGTGATGATGACCTACGCTGATGGCTTCCACAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 90 bp TCTGCAGGCTCCTCCTTCTTCCTCACTTTGAGTCGGGTGAGCAGCTaGATCAACCAGACATCCCACTCCTCTGGCAGGAGCAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: SAGSSFFLTLSRVSS*INQTSHSSGRSRRR
Trigger: TCTCCTCCTGCTCCTGCCAGAGGAGTGGGATGTCTGGTTGATCAAGCTGCTCACCCGACTCAAAGTGAGGAAGAAGGAGGAGCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 72 bp GGTGAGCAGCTTGATCAACCAGACATCCCACTCCTCTaGCAGGAGCAGGAGGAGAAAACCCAGGCCGATGAT +
Preference number: 6 (lower is better)
Translates to: GEQLDQPDIPLL*QEQEEKTQADD
Trigger: ATCATCGGCCTGGGTTTTCTCCTCCTGCTCCTGCCAGAGGAGTGGGATGTCTGGTTGATCAAGCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 72 bp CTTGAACAAAACCTTGTAGAGGGCAGACATCGATGCTaGGGCCACCACCAGTGCGATGCCGATGACGGAGTG +
Preference number: 6 (lower is better)
Translates to: LEQNLVEGRHRC*GHHQCDADDGV
Trigger: CACTCCGTCATCGGCATCGCACTGGTGGTGGCCTCAGCATCGATGTCTGCCCTCTACAAGGTTTTGTTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CAA 72 bp TCCTCCTTCTTCCTCACTTTGAGTCGGGTGAGCAGCTaGATCAACCAGACATCCCACTCCTCTGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SSFFLTLSRVSS*INQTSHSSGRS
Trigger: GCTCCTGCCAGAGGAGTGGGATGTCTGGTTGATCAAGCTGCTCACCCGACTCAAAGTGAGGAAGAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS CCA 72 bp ATTCCCTGTATCGCTGCTTCACAGACTGCTTCTCTGTaGACTTGCAGACGTGCCCCACGTAGTACAACGGGA +
Preference number: 6 (lower is better)
Translates to: IPCIAASQTASL*TCRRAPRSTTG
Trigger: TCCCGTTGTACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTGTGAAGCAGCGATACAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS GCA 72 bp TGTATCGCTGCTTCACAGACTGCTTCTCTGTGGACTTaGAGACGTGCCCCACGTAGTACAACGGGAAGAATA +
Preference number: 6 (lower is better)
Translates to: CIAASQTASLWT*RRAPRSTTGRI
Trigger: TATTCTTCCCGTTGTACTACGTGGGGCACGTCTGCAAGTCCACAGAGAAGCAGTCTGTGAAGCAGCGATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8
CDS TCA 72 bp TGGTGTAGTGATCAATCACTGCATTCACAGGTATGCTaGGGACGATTCCAAGAGACATCAGAGTGGGATATG +
Preference number: 6 (lower is better)
Translates to: WCSDQSLHSQVC*GRFQETSEWDM
Trigger: CATATCCCACTCTGATGTCTCTTGGAATCGTCCTCAGCATACCTGTGAATGCAGTGATTGATCACTACACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366617.3
ENST00000366618.8