RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35F2 (Homo sapiens)

Ensembl gene IDs: ENSG00000110660

Ensembl transcript IDs: ENST00000375682.8, ENST00000524991.1, ENST00000525071.5, ENST00000525815.6, ENST00000532513.2, ENST00000533664.1

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCTCCAGCTTCAGCCCCAGGTTGTCAATCCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGT +
Preference number: 1 (lower is better)
Translates to: LLQLQPQVVNPNAGD*RHAAFSRLGRASRG
Trigger: ACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGGGCTGAAGCTGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR CCA 90 bp TCTCCCCAGTCCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTaGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCT +
Preference number: 1 (lower is better)
Translates to: SPQSCFPTGASKTPV*SLHLISSTRTDIGP
Trigger: AGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGGACTGGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR TCA 90 bp AAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCTaGGTCTGCTATTTCCCCAAGTGTCCCCTCAGCAGGCAGCAGGCT +
Preference number: 1 (lower is better)
Translates to: KPNHWIQPRVVECPF*VCYFPKCPLSRQQA
Trigger: AGCCTGCTGCCTGCTGAGGGGACACTTGGGGAAATAGCAGACTCAGAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR GCA 90 bp AGTCCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTaGACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACAC +
Preference number: 1 (lower is better)
Translates to: SPAFPLVPLRPQCGV*TSSPQHEQILVLKH
Trigger: GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR TCA 90 bp CTCCTGTCTGCTCAGCTTCTTCACGATGTATTCCTCACAAACATTTaGAATGGCATAGAGGGAAGCCCCAAGAAGGACCAAGATGTCACC +
Preference number: 1 (lower is better)
Translates to: LLSAQLLHDVFLTNI*NGIEGSPKKDQDVT
Trigger: GGTGACATCTTGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGCTGAGCAGACAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR TCA 90 bp AGACAGACAGCCACGGCGATGAAGTGGATCACTCTGTATCTTGCATaGAGAATAAACCATGACAGAGCCATCAACACAGGAATCCCAAAG +
Preference number: 1 (lower is better)
Translates to: RQTATAMKWITLYLA*RINHDRAINTGIPK
Trigger: CTTTGGGATTCCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCATGCAAGATACAGAGTGATCCACTTCATCGCCGTGGCTGTCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR CCA 90 bp GTCTGCTCAGCTTCTTCACGATGTATTCCTCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAAGAAGGACCAAGATGTCACCAATCA +
Preference number: 1 (lower is better)
Translates to: VCSASSRCIPHKHLK*HRGKPQEGPRCHQS
Trigger: TGATTGGTGACATCTTGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGCTGAGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR TCA 90 bp GGCGATGAAGTGGATCACTCTGTATCTTGCATGAAGAATAAACCATaGCAGAGCCATCAACACAGGAATCCCAAAGCAATCCAAAAGCTG +
Preference number: 1 (lower is better)
Translates to: GDEVDHSVSCMKNKP*QSHQHRNPKAIQKL
Trigger: CAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCATGCAAGATACAGAGTGATCCACTTCATCGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR GCA 90 bp ATTGATAAAGCTCTGAAGCATGGGGGTGTTCACTTTGTATCTTTCTaGCAAATACTGGCTGGTGATGGCTGTCCCACATATACACAAGGA +
Preference number: 1 (lower is better)
Translates to: IDKALKHGGVHFVSF*QILAGDGCPTYTQG
Trigger: TCCTTGTGTATATGTGGGACAGCCATCACCAGCCAGTATTTGGCAGAAAGATACAAAGTGAACACCCCCATGCTTCAGAGCTTTATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR-3UTR CCA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGCCACCAAGCCCAGCCTaGACAGCCTGCTTTCCCGCC +
Preference number: 2 (lower is better)
Translates to: FGGRGGQIALAQEFEISLPPSPA*TACFPA
Trigger: GGCGGGAAAGCAGGCTGTCCAGGCTGGGCTTGGTGG...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR GCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACGCAGGCAGCAGGCTCTaGTTTATCCTGGTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHAGSRL*FILVGD
Trigger: ATCCCCCACCAGGATAAAGCAGAGCCTGCTGCCTGC...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATATCCTGGTGGGGGATaGGTGCGCCATCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQYPGGG*VRHLLQ
Trigger: CTGGAGAAGATGGCGCACCCATCCCCCACCAGGATA...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp CCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATATCTGCTTTATCCTGGTaGGGGATGGGTGCGCCATCT +
Preference number: 2 (lower is better)
Translates to: PHAVSPKASSVPKGLWTISALSW*GMGAPS
Trigger: AGATGGCGCACCCATCCCCCACCAGGATAAAGCAGA...TATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGCCACCAAGCCCAGCCTaGACAGCCTGCTTTCCCGCC +
Preference number: 2 (lower is better)
Translates to: LISQDFSRADPPVFCHMQPPSPA*TACFPA
Trigger: GGCGGGAAAGCAGGCTGTCCAGGCTGGGCTTGGTGG...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR GCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCCTGGTGGGGGATGGGTaGGCCATCTTCTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCLVGDG*AIFSSY
Trigger: GTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAG...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525071.5
3UTR-3UTR GCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGGCAGGCAGCAGGCTCTaGTTTATCCTGGTGGGGGAT +
Preference number: 2 (lower is better)
Translates to: LISQDFSRADPPVFCHMQAGSRL*FILVGD
Trigger: ATCCCCCACCAGGATAAAGCAGAGCCTGCTGCCTGC...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACCTGCTTTCCCGCCCTaGCCTGAGGCTGGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: GKVPRFTALQFNACIVLTPAFPP*PEAGSV
Trigger: GACTGAGCCAGCCTCAGGCCAGGGCGGGAAAGCAGG...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGTATCCTGGTGGGGGATaGGTGCGCCATCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: VIALSFNSWRLPGILFGEYPGGG*VRHLLQ
Trigger: CTGGAGAAGATGGCGCACCCATCCCCCACCAGGATA...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGTCTGCTTTATCCTGGTaGGGGATGGGTGCGCCATCT +
Preference number: 2 (lower is better)
Translates to: LISQDFSRADPPVFCHMQSALSW*GMGAPS
Trigger: AGATGGCGCACCCATCCCCCACCAGGATAAAGCAGA...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR TCA 90 bp CCAGCTACAAGACAGCAGAGTGGGTCTCCTGGAGGTTCTCCTCCAGCTTCAGCCACTCTGTATCTTGCATaGAGAATAAACCATGACAGA +
Preference number: 2 (lower is better)
Translates to: PATRQQSGSPGGSPPASATLYLA*RINHDR
Trigger: TCTGTCATGGTTTATTCTTCATGCAAGATACAGAGT...GGCTGAAGCTGGAGGAGAACCTCCAGGAGACCCACTCTGCTGTCTTGTAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR-3UTR CCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGTTTCGGAGGCCGAGGTaGGCAGATCGCTTTAGCTCA +
Preference number: 2 (lower is better)
Translates to: VIALSFNSWRLPGILFGEFRRPR*ADRFSS
Trigger: TGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAAA...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR CAA 90 bp CCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATaGGTCCTCAAACACAGAAACACACTCTTAGCTTGGTTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PQCGVCTSSPQHEQI*VLKHRNTLLAWFLL
Trigger: GAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp ATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGAGTTGTGAATCCTGCTGTGGTTTaGACTCCTGGCTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: INTGIPKQSKSWTLVRVVNPAVV*TPGSCC
Trigger: GCAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATT...CACAACTCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR-3UTR GCA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCATCTCTCCCCAGTCCTaGTTTCCCACTGGTGCCTCT +
Preference number: 2 (lower is better)
Translates to: CGKVPRFTALQFNACIVLISPQS*FPTGAS
Trigger: AGAGGCACCAGTGGGAAAGCAGGACTGGGGAGAGAT...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp CCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAAACACGAACAGATATTaGTCCTCAAACACAGAAACA +
Preference number: 2 (lower is better)
Translates to: PHAVSPKASSVPKGLWTINTNRY*SSNTET
Trigger: TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTT...TATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp ATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGAGTTGTGCACAGAATCCTGCTGTaGTTTGGACTCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: INTGIPKQSKSWTLVRVVHRILL*FGLLAP
Trigger: AGGAGCCAGGAGTCCAAACCACAGCAGGATTCTGTG...CACAACTCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR CAA 90 bp ACTCCTGTCTGCTCAGCTTCTTCACGATGTATTCCTCACAAACATTaGAAATGGCATAGAGGGAAGCCCCAAGAAGGACCAAGATGTCAC +
Preference number: 2 (lower is better)
Translates to: TPVCSASSRCIPHKH*KWHRGKPQEGPRCH
Trigger: GTGACATCTTGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGCTGAGCAGACAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR-3UTR CCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCCTAAAACCTAACCACTaGATCCAACCCAGGGTTGTA +
Preference number: 2 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCLKPNH*IQPRVV
Trigger: TACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAG...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACATCTAAGACCCCAGTGTaGAGTCTGCACCTCATCTCC +
Preference number: 2 (lower is better)
Translates to: GKVPRFTALQFNACIVLTSKTPV*SLHLIS
Trigger: GGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGA...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp TGTCCCACATATACACAAGGACAACATCTGACCCAGGGCAATTGTTTTCAAAATTGTGGTTTGGACTCCTaGCTCCTGCTGCTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: CPTYTQGQHLTQGNCFQNCGLDS*LLLLLW
Trigger: CCAGAGAAGCAGCAGGAGCCAGGAGTCCAAACCACA...ATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR-3UTR TCA 90 bp CACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACACTGTAGAGTGTCCATTCTaGGTCTGCTATTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: HLISSTRTDIGPQTQKHTVECPF*VCYFPK
Trigger: CTTGGGGAAATAGCAGACTCAGAATGGACACTCTAC...AGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CCA 90 bp CTTTTCAAGATTACTAAAAGGTTATCACTGCCTGATCGAAATGCCAGCATCACTTCTCTGGTCTCTCTGTaGTTTGGCAGCGTAACCCTC +
Preference number: 2 (lower is better)
Translates to: LFKITKRLSLPDRNASITSLVSL*FGSVTL
Trigger: GAGGGTTACGCTGCCAAACCACAGAGAGACCAGAGA...AGTGATGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAGTAATCTTGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR-3UTR GCA 90 bp CTTTTCAAGATTACTAAAAGGTTATCACTGCCTGATCGAAATGCCAGCATCACTATATTCACAGAATCCTaGTGTGGTTTGGACTCCTGG +
Preference number: 2 (lower is better)
Translates to: LFKITKRLSLPDRNASITIFTES*CGLDSW
Trigger: CCAGGAGTCCAAACCACAGCAGGATTCTGTGAATAT...AGTGATGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAGTAATCTTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR TCA 72 bp CCAGCTTCAGCCCCAGGTTGTCAATCCCAATGCTGGTaGCTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCG +
Preference number: 3 (lower is better)
Translates to: PASAPGCQSQCW*LEARCFQPARP
Trigger: CGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGGGCTGAAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR CCA 72 bp CTTCAGCCCCAGGTTGTCAATCCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCG +
Preference number: 3 (lower is better)
Translates to: LQPQVVNPNAGD*RHAAFSRLGRA
Trigger: CGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGGGCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR CCA 72 bp TCCCCTCAGCAGGCAGCAGGCTCTGCTTTATCCTGGTaGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGA +
Preference number: 3 (lower is better)
Translates to: SPQQAAGSALSW*GMGAPSSPATR
Trigger: TCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAGCCTGCTGCCTGCTGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
3UTR-3UTR CAA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGGGGCAGGCAGATCACTaGAGGTCGGGAGGTCAAGAC +
Preference number: 3 (lower is better)
Translates to: FGGRGGQIALAQEFEISLGQADH*RSGGQD
Trigger: GTCTTGACCTCCCGACCTCAAGTGATCTGCCTGCCC...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR TCA 72 bp CACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCTaGGTCTGCTATTTCCCCAAGTGTCCCCTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: HWIQPRVVECPF*VCYFPKCPLSR
Trigger: CCTGCTGAGGGGACACTTGGGGAAATAGCAGACTCAGAATGGACACTCTACAACCCTGGGTTGGATCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR CCA 72 bp TCCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTaGAGTCTGCACCTCATCTCCTCAACACGAACAGAT +
Preference number: 3 (lower is better)
Translates to: SCFPTGASKTPV*SLHLISSTRTD
Trigger: ATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CAA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGTACAGTAAGCTGAGCTaGCACCACTGCACTCTAGAC +
Preference number: 3 (lower is better)
Translates to: FGGRGGQIALAQEFEISLYSKLS*HHCTLD
Trigger: GTCTAGAGTGCAGTGGTGCAAGCTCAGCTTACTGTA...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR TCA 72 bp AGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTaGCCCACCCGTTTTCTGCCACATGCAGTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: STHTYISRLFKG*PTRFLPHAVSP
Trigger: GGGGCTGACTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR-3UTR CAA 90 bp TATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAGCGAATCCTGCTGTGGTTaGGACTCCTGGCTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: YHCLIEMPASLYKLGTASESCCG*DSWLLL
Trigger: CAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATTC...GCTTGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
3UTR-3UTR CAA 90 bp GACTTTAATCACCAATGGCATGAAGCTGTACAGGCAAAACATACACAGGGCAAAACATCACTCCCTGAATaGTCTTCCCTCCCTGCTAGT +
Preference number: 3 (lower is better)
Translates to: DFNHQWHEAVQAKHTQGKTSLPE*SSLPAS
Trigger: ACTAGCAGGGAGGGAAGACAATTCAGGGAGTGATGT...TTTGCCCTGTGTATGTTTTGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR TCA 72 bp GCTCAGCTTCTTCACGATGTATTCCTCACAAACATTTaGAATGGCATAGAGGGAAGCCCCAAGAAGGACCAA +
Preference number: 3 (lower is better)
Translates to: AQLLHDVFLTNI*NGIEGSPKKDQ
Trigger: TTGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR-3UTR CAA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGCAACACGAACAGATATaGGTCCTCAAACACAGAAAC +
Preference number: 3 (lower is better)
Translates to: VIALSFNSWRLPGILFGEQHEQI*VLKHRN
Trigger: GTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTG...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR CCA 72 bp GCTTCTTCACGATGTATTCCTCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAAGAAGGACCAAGATGT +
Preference number: 3 (lower is better)
Translates to: ASSRCIPHKHLK*HRGKPQEGPRC
Trigger: ACATCTTGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR TCA 72 bp GTGGATCACTCTGTATCTTGCATGAAGAATAAACCATaGCAGAGCCATCAACACAGGAATCCCAAAGCAATC +
Preference number: 3 (lower is better)
Translates to: VDHSVSCMKNKP*QSHQHRNPKAI
Trigger: GATTGCTTTGGGATTCCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCATGCAAGATACAGAGTGATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR TCA 72 bp AATGCCACGAACAGCAGGGCAATTTTCCAGTCCCAATaGATGCTGGCAATATCCTTATATTCCACAATCAAT +
Preference number: 3 (lower is better)
Translates to: NATNSRAIFQSQ*MLAISLYSTIN
Trigger: ATTGATTGTGGAATATAAGGATATTGCCAGCATTCATTGGGACTGGAAAATTGCCCTGCTGTTCGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
3UTR-3UTR CAA 90 bp TATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAGCTCTGACCCAGGGCAATaGTTTTCAAAATATTCACAG +
Preference number: 3 (lower is better)
Translates to: YHCLIEMPASLYKLGTASSDPGQ*FSKYSQ
Trigger: CTGTGAATATTTTGAAAACAATTGCCCTGGGTCAGA...GCTTGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp AATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGTCCTGCGCAGCAGGCTaGAGAACTCGGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: NPNAGDWRHAAFSRLGRASCAAG*RTRPPL
Trigger: GAGCGGCGGCCGAGTTCTCCAGCCTGCTGCGCAGGA...CGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCCCCCGGCGCTCGGCTTaGATGCCCTGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLPRRSA*MPCPGH
Trigger: GTGGCCAGGGCAGGGCATCCAAGCCGAGCGCCGGGG...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp CTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCTCCTGCGCAGCAGGCTaGAGAACTCGGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LSAGSAVRVGVEQYRINPSCAAG*RTRPPL
Trigger: GAGCGGCGGCCGAGTTCTCCAGCCTGCTGCGCAGGA...GGGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR GCA 90 bp GATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCCTGGAGGGCCCGCTGGCGAGTCTaGCTCCATCGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: DGCAIFSSYKTAEWVSWRARWRV*LHRRPC
Trigger: GCAAGGGCGCCGATGGAGGCAGACTCGCCAGCGGGC...CCTCCAGGAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp CAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGCCCGCTGGCGAGTCTaGCTCCATCGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QVVNPNAGDWRHAAFSRLARWRV*LHRRPC
Trigger: GCAAGGGCGCCGATGGAGGCAGACTCGCCAGCGGGC...GAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR GCA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTGAAGACGGGAGGCGGTaGCTGTGCGGCCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSEDGRR*LCGRLG
Trigger: CCCCAGCCGGCCGCACAGGCACCGCCTCCCGTCTTC...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp ACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGGCAGAGTGGGTCTCCTaGAGGTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGGTLLSAGSAVRVGVEQAEWVS*RFSSSF
Trigger: GAAGCTGGAGGAGAACCTCCAGGAGACCCACTCTGC...CTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR GCA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCAGGGAGAGAGACGGTaGCAACCCCCGGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSQGERR*QPPALG
Trigger: GCCGAGCGCCGGGGGTTGGCACCGTCTCTCTCCCTG...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCCCTGCTTTCCCGCCCTaGCCTGAGGCTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLPAFPP*PEAGSV
Trigger: GACTGAGCCAGCCTCAGGCCAGGGCGGGAAAGCAGG...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR TCA 90 bp TGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTAAGACAGCCACGGCGATaGAGTGGATCACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: WRHAAFSRLGRASRGGAVRQPRR*SGSLCI
Trigger: GATACAGAGTGATCCACTTCATCGCCGTGGCTGTCT...TACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR TCA 90 bp ACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGCAATACATCACTCCCTaGATTGTCTTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: TGGTLLSAGSAVRVGVEQQYITP*IVFPPC
Trigger: GCAGGGAGGGAAGACAATTCAGGGAGTGATGTATTG...CTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp ACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGCTTTCTGCCAAATACTaGCTGGTGATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TGGTLLSAGSAVRVGVEQLSAKY*LVMAVP
Trigger: TGGGACAGCCATCACCAGCCAGTATTTGGCAGAAAG...CTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR CCA 90 bp GCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGCCACGGCGATGAAGTaGATCACTCTGTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: AGDWRHAAFSRLGRASRGATAMK*ITLYLA
Trigger: TGCAAGATACAGAGTGATCCACTTCATCGCCGTGGC...ACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTGCGTGGATGGAGGCGTaGCTCATTCCTCGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSAWMEA*LIPRGV
Trigger: CACACCGCGAGGAATGAGCCACGCCTCCATCCACGC...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCTGGTGGGGGATGGGTaGGCCATCTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSLVGDG*AIFSSY
Trigger: GTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAG...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACACCACGCCCACTTTCCTaGCGGCGCCCAGTGAGCGTT +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTPRPLS*RRPVSV
Trigger: AACGCTCACTGGGCGCCGGCAGGAAAGTGGGCGTGG...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACCAGTTGTCTCCGCCGTaGCAGGGAGAGAGACGGTGC +
Preference number: 4 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHQLSPP*QGERRC
Trigger: GCACCGTCTCTCTCCCTGGCACGGCGGAGACAACTG...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp AATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGCATACACAGGGCAAATaGCACGAACAGCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NPNAGDWRHAAFSRLGRAHTQGK*HEQQGA
Trigger: AGCTCCCTGCTGTTCGTGGCATTTGCCCTGTGTATG...CGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR CCA 90 bp CCCAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCCCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRLSIPMLVTGGTLLSAGPNAGD*RHAAFS
Trigger: GCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGG...GCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp AATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGGCCACGGCGATGAAGTaGATCACTCTGTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: NPNAGDWRHAAFSRLGRAATAMK*ITLYLA
Trigger: TGCAAGATACAGAGTGATCCACTTCATCGCCGTGGC...CGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCTCTGCTTTATCCTGGTaGGGGATGGGTGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLSALSW*GMGAPS
Trigger: AGATGGCGCACCCATCCCCCACCAGGATAAAGCAGA...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR TCA 90 bp CTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCCCAAATACTGGCTGGTaGTGGCTGTCCCACATATAC +
Preference number: 4 (lower is better)
Translates to: LSAGSAVRVGVEQYRINPPNTGW*WLSHIY
Trigger: GTATATGTGGGACAGCCATCACCAGCCAGTATTTGG...GGGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR TCA 90 bp GCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCAATACATCACTCCCTaGATTGTCTTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AFSRLGRASRGGAVQDKPQYITP*IVFPPC
Trigger: GCAGGGAGGGAAGACAATTCAGGGAGTGATGTATTG...GGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR TCA 90 bp AGCCCCAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCCAATCCCAATGCTGGTaGCTGGAGGCACGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPRLSIPMLVTGGTLLSAQSQCW*LEARCF
Trigger: AAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTG...GGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR GCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACGCCCGCTGGCGAGTCTaGCTCCATCGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHARWRV*LHRRPC
Trigger: GCAAGGGCGCCGATGGAGGCAGACTCGCCAGCGGGC...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACCCGTTTTCTGCCACATaGAGTCAGCCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHPFSAT*SQPQGL
Trigger: GAGGCCTTGGGGCTGACTGCATGTGGCAGAAAACGG...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGGGCGCTCGGCTTGGATaGCCTGCCCTGGCCACGCCT +
Preference number: 4 (lower is better)
Translates to: LISQDFSRADPPVFCHMQGARLG*PALATP
Trigger: AGGCGTGGCCAGGGCAGGGCATCCAAGCCGAGCGCC...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAACCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQPNAGD*RHAAFS
Trigger: GCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGG...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTGCAGAGTGGGTCTCCTaGAGGTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSAEWVS*RFSSSF
Trigger: GAAGCTGGAGGAGAACCTCCAGGAGACCCACTCTGC...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTATGAAGAATAAACCATaGCAGAGCCATCAACACAGG +
Preference number: 4 (lower is better)
Translates to: PNAGDWRHAAFSRLGRASMKNKP*QSHQHR
Trigger: CCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCAT...ACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR GCA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAAATCTCTCCCCAGTCCTaGTTTCCCACTGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQISPQS*FPTGAS
Trigger: AGAGGCACCAGTGGGAAAGCAGGACTGGGGAGAGAT...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCAGACCCACCCGTTTTCTaGCACATGCAGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSPKASSVPKGLWTITASDPPVF*HMQSAP
Trigger: TGGGGCTGACTGCATGTGGCAGAAAACGGGTGGGTC...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACACTGCTCCGCTCTGGCCCTaGGCTCCCTCCCTCGCTCGC +
Preference number: 4 (lower is better)
Translates to: HLISSTRTDIGPQTQKHTAPLWP*APSLAR
Trigger: GCGAGCGAGGGAGGGAGCGCAGGGCCAGAGCGGAGC...AGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCTCCTGCGCAGCAGGCTaGAGAACTCGGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCSCAAG*RTRPPL
Trigger: GAGCGGCGGCCGAGTTCTCCAGCCTGCTGCGCAGGA...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCTATCCTGGTGGGGGATaGGTGCGCCATCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCYPGGG*VRHLLQ
Trigger: CTGGAGAAGATGGCGCACCCATCCCCCACCAGGATA...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTTTTCGGAGGCCGAGGTaGGCAGATCGCTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSFRRPR*ADRFSS
Trigger: TGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAAA...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp ATGTCTGCACCAACCATGGTTCCTACACCCAACAGACAGACAGCCACGGCGATGCAATCCCAATGCTGGTaGCTGGAGGCACGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MSAPTMVPTPNRQTATAMQSQCW*LEARCF
Trigger: AAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTG...CATCGCCGTGGCTGTCTGTCTGTTGGGTGTAGGAACCATGGTTGGTGCAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR TCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCCCTGCCGGCGCCCAGTaGGCGTTGAGGGAGAGTGAT +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCPAGAQ*ALRESD
Trigger: ATCACTCTCCCTCAACGCTCACTGGGCGCCGGCAGG...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp GCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCACCATGCTAAAAGGTTATCACTaGCTGATCGAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSAVRVGVEQYRINPTMLKGYH*LIEMPA
Trigger: TGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAG...CATGGTGGGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR GCA 90 bp AGAGCCATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGACTCCATCGGCGCCCTTaGGCGTCTCCGGCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RAINTGIPKQSKSWTLVRLHRRP*ASPAPK
Trigger: TTTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAG...TCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGATGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CCA 90 bp TCCAACAAAAAGGCTGTAGAGGTCCGCTGTCAGGATGCCCAGGTTGACGGAAGTCCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SNKKAVEVRCQDAQVDGSPNAGD*RHAAFS
Trigger: GCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGG...ACTTCCGTCAACCTGGGCATCCTGACAGCGGACCTCTACAGCCTTTTTGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGTCCTGCGCAGCAGGCTaGAGAACTCGGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VIALSFNSWRLPGILFGESCAAG*RTRPPL
Trigger: GAGCGGCGGCCGAGTTCTCCAGCCTGCTGCGCAGGA...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCCCACCAAGCCCAGCCTaGACAGCCTGCTTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCPPSPA*TACFPA
Trigger: GGCGGGAAAGCAGGCTGTCCAGGCTGGGCTTGGTGG...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCAATACAAAACTTAGCTaGGCGTGGGGCCACATGCTT +
Preference number: 4 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLNTKLS*AWGHML
Trigger: AAGCATGTGGCCCCACGCCCAGCTAAGTTTTGTATT...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCAATTTGAGATTAGCCTaGGCAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLNLRLA*ATWRNP
Trigger: GGGGTTTCGCCATGTTGCCCAGGCTAATCTCAAATT...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCATTTCGGAGGCCGAGGTaGGCAGATCGCTTTAGCTCA +
Preference number: 4 (lower is better)
Translates to: VSPKASSVPKGLWTITASFRRPR*ADRFSS
Trigger: TGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAAA...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACGCTTCCACGGGCTGCTaGCTGCCCTCGGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHASTGC*LPSGVT
Trigger: AGTTACCCCCGAGGGCAGCCAGCAGCCCGTGGAAGC...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR TCA 90 bp ATGTCTGCACCAACCATGGTTCCTACACCCAACAGACAGACAGCCACGGCGATGAGACAGCCACGGCGATaGAGTGGATCACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: MSAPTMVPTPNRQTATAMRQPRR*SGSLCI
Trigger: GATACAGAGTGATCCACTTCATCGCCGTGGCTGTCT...CATCGCCGTGGCTGTCTGTCTGTTGGGTGTAGGAACCATGGTTGGTGCAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR TCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACACTCCAGAGCCACCGTaGGCTGCCCCTGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHTPEPP*AAPVPD
Trigger: GTCAGGAACAGGGGCAGCTCACGGTGGCTCTGGAGT...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCAAGACTTTTCAAGGGCTaGCCCACCCGTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSPKASSVPKGLWTITASRLFKG*PTRFLP
Trigger: TGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCT...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp GGTTATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAGCCCGCTGGCGAGTCTaGCTCCATCGGCGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GYHCLIEMPASLYKLGTAARWRV*LHRRPC
Trigger: GCAAGGGCGCCGATGGAGGCAGACTCGCCAGCGGGC...TGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp TGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTAAGTCCCAATGAATGCTaGCAATATCCTTATATTCCA +
Preference number: 4 (lower is better)
Translates to: WRHAAFSRLGRASRGGAVSPNEC*QYPYIP
Trigger: TGGAATATAAGGATATTGCCAGCATTCATTGGGACT...TACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CCA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCCCTGCTTTCCCGCCCTaGCCTGAGGCTGGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFPAFPP*PEAGSV
Trigger: GACTGAGCCAGCCTCAGGCCAGGGCGGGAAAGCAGG...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATACCAAATACTGGCTGGTaGTGGCTGTCCCACATATAC +
Preference number: 4 (lower is better)
Translates to: PHAVSPKASSVPKGLWTIPNTGW*WLSHIY
Trigger: GTATATGTGGGACAGCCATCACCAGCCAGTATTTGG...TATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCACCATGATATGAAGAATAAACCATaGCAGAGCCATCAACACAGG +
Preference number: 4 (lower is better)
Translates to: RLGRASRGGAVQDKPHHDMKNKP*QSHQHR
Trigger: CCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCAT...ATCATGGTGGGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR TCA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCACAATACATCACTCCCTaGATTGTCTTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSPKASSVPKGLWTITASQYITP*IVFPPC
Trigger: GCAGGGAGGGAAGACAATTCAGGGAGTGATGTATTG...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CCCAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTTCCTCACAAACATTTaGAATGGCATAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PRLSIPMLVTGGTLLSAGFLTNI*NGIEGS
Trigger: GCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAA...GCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR GCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCATACACAGGGCAAATaGCACGAACAGCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCHTQGK*HEQQGN
Trigger: ATTGCCCTGCTGTTCGTGGCATTTGCCCTGTGTATG...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAGCCTCCATCGGCGCCCTTaGGCGTCTCCGGCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: YHCLIEMPASLYKLGTASLHRRP*ASPAPK
Trigger: TTTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAG...GCTTGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR GCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTCCATCGGCGCCCTTaGGCGTCTCCGGCGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTLHRRP*ASPAPK
Trigger: TTTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAG...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGTTCCTTGGTTGTTGCTaGTGTCACGTCTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: FGGRGGQIALAQEFEISLFLGCC*CHVFPP
Trigger: TGGCGGGAAGACGTGACAGCAGCAACAACCAAGGAA...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp GTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: VVNPNAGDWRHAAFSRLGHKHLK*HRGKPQ
Trigger: TTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTG...GCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp TATTCACAGAATCCTGCTGTGGTTTGGACTCCTGGCTCCTGCTGCTTCTCTGGTTGTGGTTTGGACTCCTaGCTCCTGCTGCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: YSQNPAVVWTPGSCCFSGCGLDS*LLLLLW
Trigger: CCAGAGAAGCAGCAGGAGCCAGGAGTCCAAACCACA...ACCAGAGAAGCAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATTCTGTGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACTTGTCTTTTAACAGCTaGAGGCTCCCAGGCATACTC +
Preference number: 4 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHLSFNS*RLPGIL
Trigger: GAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAA...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAACCCCACTCTGTATCTTGCATaGAGAATAAACCATGACAGA +
Preference number: 4 (lower is better)
Translates to: LSAGSAVRVGVEQYRINPTLYLA*RINHDR
Trigger: TCTGTCATGGTTTATTCTTCATGCAAGATACAGAGT...GGGGTTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR GCA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCTAAAAGGTTATCACTaGCTGATCGAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSLKGYH*LIEMPA
Trigger: TGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAG...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp GTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTTCCAGTCCCAATGAATaGTGGCAATATCCTTATATT +
Preference number: 4 (lower is better)
Translates to: VNPNAGDWRHAAFSRLGRSSPNE*WQYPYI
Trigger: AATATAAGGATATTGCCAGCATTCATTGGGACTGGA...ACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR GCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACCCGTTTTCTGCCACATaGAGTCAGCCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHPFSAT*SQPQGL
Trigger: GAGGCCTTGGGGCTGACTGCATGTGGCAGAAAACGG...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAATTTTCCTTGGTTGTTaGTGCTGTCACGTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTIFLGC*CCHVFP
Trigger: CGGGAAGACGTGACAGCAGCAACAACCAAGGAAAAT...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGGCCACGGCGATGAAGTaGATCACTCTGTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: FGGRGGQIALAQEFEISLATAMK*ITLYLA
Trigger: TGCAAGATACAGAGTGATCCACTTCATCGCCGTGGC...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSHKHLK*HRGKPQ
Trigger: TTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTG...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp CAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGACTTTAATCACCAATaGCATGAAGCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: QVVNPNAGDWRHAAFSRLDFNHQ*HEAVQA
Trigger: TGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTC...GAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAACTAAAACCTAACCACTaGATCCAACCCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQLKPNH*IQPRVV
Trigger: TACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAG...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCCCACCAAGCCCAGCCTaGACAGCCTGCTTTCCCGCC +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFPPSPA*TACFPA
Trigger: GGCGGGAAAGCAGGCTGTCCAGGCTGGGCTTGGTGG...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCAATTTGAGATTAGCCTaGGCAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCNLRLA*ATWRNP
Trigger: GGGGTTTCGCCATGTTGCCCAGGCTAATCTCAAATT...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGACCTTTGTGGCGTGGATaGAGGCGTGGCTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: GVCTSSPQHEQILVLKHRPLWRG*RRGSFL
Trigger: GAGGAATGAGCCACGCCTCCATCCACGCCACAAAGG...TCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGGCAGGCAGCAGGCTCTaGTTTATCCTGGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: VIALSFNSWRLPGILFGEAGSRL*FILVGD
Trigger: ATCCCCCACCAGGATAAAGCAGAGCCTGCTGCCTGC...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACATCTCTCCCCAGTCCTaGTTTCCCACTGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHISPQS*FPTGAS
Trigger: AGAGGCACCAGTGGGAAAGCAGGACTGGGGAGAGAT...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TATTCACAGAATCCTGCTGTGGTTTGGACTCCTGGCTCCTGCTGCTTCTCTGGTCTTTCTGCCAAATACTaGCTGGTGATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: YSQNPAVVWTPGSCCFSGLSAKY*LVMAVP
Trigger: TGGGACAGCCATCACCAGCCAGTATTTGGCAGAAAG...ACCAGAGAAGCAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATTCTGTGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp CTTTTCAAGATTACTAAAAGGTTATCACTGCCTGATCGAAATGCCAGCATCACTTCCTGCGCAGCAGGCTaGAGAACTCGGCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LFKITKRLSLPDRNASITSCAAG*RTRPPL
Trigger: GAGCGGCGGCCGAGTTCTCCAGCCTGCTGCGCAGGA...AGTGATGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAGTAATCTTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACACTAAAACCTAACCACTaGATCCAACCCAGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTLKPNH*IQPRVV
Trigger: TACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAG...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGTTGTCTTTTAACAGCTaGAGGCTCCCAGGCATACTC +
Preference number: 4 (lower is better)
Translates to: FGGRGGQIALAQEFEISLLSFNS*RLPGIL
Trigger: GAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAA...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCCAATCCCAATGCTGGTaGCTGGAGGCACGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFQSQCW*LEARCF
Trigger: AAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTG...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTTATTCCAGGAGGTCGTaGGAAGTTTTTAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSYSRRS*EVFRKD
Trigger: ATCCTTTCTAAAAACTTCTCACGACCTCCTGGAATA...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTAAAAGGTTATCACTaGCTGATCGAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCLKGYH*LIEMPA
Trigger: TGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAG...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACACTAAAAACTCCTGTCTaGTCAGCTTCTTCACGATGT +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTLKTPV*SASSRC
Trigger: ACATCGTGAAGAAGCTGAGCAGACAGGAGTTTTTAG...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTGGTGGGGGATGGGTaGGCCATCTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTLVGDG*AIFSSY
Trigger: GTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAG...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp ATGTCTGCACCAACCATGGTTCCTACACCCAACAGACAGACAGCCACGGCGATGCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: MSAPTMVPTPNRQTATAMHKHLK*HRGKPQ
Trigger: TTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTG...CATCGCCGTGGCTGTCTGTCTGTTGGGTGTAGGAACCATGGTTGGTGCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CCA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTAGTCCCAATGAATGCTaGCAATATCCTTATATTCCA +
Preference number: 4 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSSPNEC*QYPYIP
Trigger: TGGAATATAAGGATATTGCCAGCATTCATTGGGACT...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGACTTTAATCACCAATaGCATGAAGCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTDFNHQ*HEAVQA
Trigger: TGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTC...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCTCTAAGACCCCAGTGTaGAGTCTGCACCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCSKTPV*SLHLIS
Trigger: GGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGA...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACACTCTGTATCTTGCATaGAGAATAAACCATGACAGA +
Preference number: 4 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHTLYLA*RINHDR
Trigger: TCTGTCATGGTTTATTCTTCATGCAAGATACAGAGT...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTAGGGGTGGAGCAGTACAGGATAAACCCCACCATGATGACAGTGAAGGACAGGTTCCTCACAAACATTTaGAATGGCATAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGVEQYRINPTMMTVKDRFLTNI*NGIEGS
Trigger: GCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAA...CCTGTCCTTCACTGTCATCATGGTGGGGTTTATCCTGTACTGCTCCACCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR TCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGTATGACCTGGGACTaGAACTGTGGAGCACATAGC +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCSMTWD*NCGAHS
Trigger: GCTATGTGCTCCACAGTTTCAGTCCCAGGTCATACT...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAAGCTTTTTCTTTGTTGTaGTACTGTGCACTAAGACTT +
Preference number: 4 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQAFSLL*YCALRL
Trigger: AAGTCTTAGTGCACAGTATCACAACAAAGAAAAAGC...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCGACCCACCCGTTTTCTaGCACATGCAGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFDPPVF*HMQSAP
Trigger: TGGGGCTGACTGCATGTGGCAGAAAACGGGTGGGTC...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCCTGAGCTTGCACCACTaGACTCTAGACTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCLSLHH*TLDSAS
Trigger: AGATGCAGAGTCTAGAGTGCAGTGGTGCAAGCTCAG...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TCCAACAAAAAGGCTGTAGAGGTCCGCTGTCAGGATGCCCAGGTTGACGGAAGTGACTTTAATCACCAATaGCATGAAGCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: SNKKAVEVRCQDAQVDGSDFNHQ*HEAVQA
Trigger: TGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTC...ACTTCCGTCAACCTGGGCATCCTGACAGCGGACCTCTACAGCCTTTTTGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACATATCCTGGTGGGGGATaGGTGCGCCATCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTYPGGG*VRHLLQ
Trigger: CTGGAGAAGATGGCGCACCCATCCCCCACCAGGATA...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACACTTCTGCTTTATCCTGGTaGGGGATGGGTGCGCCATCT +
Preference number: 4 (lower is better)
Translates to: HLISSTRTDIGPQTQKHTSALSW*GMGAPS
Trigger: AGATGGCGCACCCATCCCCCACCAGGATAAAGCAGA...AGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACAACACACTCTTAGCTTaGTTTCTGCTCTATTTTGGT +
Preference number: 4 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHNTLLA*FLLYFG
Trigger: ACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTT...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGTCAGTGAGTTTTCATTaGCTGACCCTCCCGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LISQDFSRADPPVFCHMQSVSFH*LTLPEL
Trigger: CAACTCCGGGAGGGTCAGCCAATGAAAACTCACTGA...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR TCA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCCAATCCCAATGCTGGTaGCTGGAGGCACGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CGKVPRFTALQFNACIVLQSQCW*LEARCF
Trigger: AAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTG...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCGTAGAGTGTCCATTCTaGGTCTGCTATTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HLYLKTFQGLTHPFSATCVECPF*VCYFPK
Trigger: CTTGGGGAAATAGCAGACTCAGAATGGACACTCTAC...GCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGGTAGAGTGTCCATTCTaGGTCTGCTATTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LISQDFSRADPPVFCHMQVECPF*VCYFPK
Trigger: CTTGGGGAAATAGCAGACTCAGAATGGACACTCTAC...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCAATATATATGGAGCTCTaGAAACTGTTGGAGAGTATG +
Preference number: 4 (lower is better)
Translates to: VSPKASSVPKGLWTITASIYMEL*KLLESM
Trigger: CATACTCTCCAACAGTTTTCAGAGCTCCATATATAT...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp CTCTGCTTTATCCTGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACATCCAGTCCCAATGAATaGTGGCAATATCCTTATATT +
Preference number: 4 (lower is better)
Translates to: LCFILVGDGCAIFSSYKTSSPNE*WQYPYI
Trigger: AATATAAGGATATTGCCAGCATTCATTGGGACTGGA...TGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCAGGATAAAGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR GCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTGCACTCTAGACTCTaGATCTCAAACAAACAAAAA +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCLHSRL*ISNKQK
Trigger: TTTTTGTTTGTTTGAGATGCAGAGTCTAGAGTGCAG...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCCTTTCTGCCAAATACTaGCTGGTGATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFLSAKY*LVMAVP
Trigger: TGGGACAGCCATCACCAGCCAGTATTTGGCAGAAAG...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAAGTCCCAATGAATGCTaGCAATATCCTTATATTCCA +
Preference number: 4 (lower is better)
Translates to: PHAVSPKASSVPKGLWTISPNEC*QYPYIP
Trigger: TGGAATATAAGGATATTGCCAGCATTCATTGGGACT...TATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGTTATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAATCCTGCTGTGGTTTaGACTCCTGGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GYHCLIEMPASLYKLGTANPAVV*TPGSCC
Trigger: GCAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATT...TGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCAACACACTCTTAGCTTaGTTTCTGCTCTATTTTGGT +
Preference number: 4 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCNTLLA*FLLYFG
Trigger: ACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTT...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp CACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACACTTCTAAGACCCCAGTGTaGAGTCTGCACCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: HLISSTRTDIGPQTQKHTSKTPV*SLHLIS
Trigger: GGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGA...AGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCGTACCCAAAGGCCTGTaGACAATAACTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFVPKGL*TITASA
Trigger: TGCTGAGGCAGTTATTGTCCACAGGCCTTTGGGTAC...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGGTACCCAAAGGCCTGTaGACAATAACTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VIALSFNSWRLPGILFGEVPKGL*TITASA
Trigger: TGCTGAGGCAGTTATTGTCCACAGGCCTTTGGGTAC...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAATACAAAACTTAGCTaGGCGTGGGGCCACATGCTT +
Preference number: 4 (lower is better)
Translates to: GVCTSSPQHEQILVLKHRNTKLS*AWGHML
Trigger: AAGCATGTGGCCCCACGCCCAGCTAAGTTTTGTATT...TCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACCAAATACTGGCTGGTaGTGGCTGTCCCACATATAC +
Preference number: 4 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETPNTGW*WLSHIY
Trigger: GTATATGTGGGACAGCCATCACCAGCCAGTATTTGG...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACAAGACAGCCACGGCGATaGAGTGGATCACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTRQPRR*SGSLCI
Trigger: GATACAGAGTGATCCACTTCATCGCCGTGGCTGTCT...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACTTTTACTCCAGAGCCACCGTaGGCTGCCCCTGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: HRNTLLAWFLLYFGISTFTPEPP*AAPVPD
Trigger: GTCAGGAACAGGGGCAGCTCACGGTGGCTCTGGAGT...AAAAGTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACAAGTATGACCTGGGACTaGAACTGTGGAGCACATAGC +
Preference number: 4 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETSMTWD*NCGAHS
Trigger: GCTATGTGCTCCACAGTTTCAGTCCCAGGTCATACT...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGAACTGTTGGAGAGTATaGCCTGGGACTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: VIALSFNSWRLPGILFGENCWRV*PGTETV
Trigger: CACAGTTTCAGTCCCAGGTCATACTCTCCAACAGTT...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TGTATTCCTCACAAACATTTGAAATGGCATAGAGGGAAGCCCCAAGAAGGACCACATACACAGGGCAAATaGCACGAACAGCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CIPHKHLKWHRGKPQEGPHTQGK*HEQQGN
Trigger: ATTGCCCTGCTGTTCGTGGCATTTGCCCTGTGTATG...TGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CCA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGAACACGAACAGATATTaGTCCTCAAACACAGAAACA +
Preference number: 4 (lower is better)
Translates to: FGGRGGQIALAQEFEISLNTNRY*SSNTET
Trigger: TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTT...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
3UTR CAA 72 bp GGAGTCTGCACCTCATCTCCTCAACACGAACAGATATaGGTCCTCAAACACAGAAACACACTCTTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVCTSSPQHEQI*VLKHRNTLLAW
Trigger: CCAAGCTAAGAGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GGTTATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCACCAAATACTGGCTGGTaGTGGCTGTCCCACATATAC +
Preference number: 4 (lower is better)
Translates to: GYHCLIEMPASLYKLGTAPNTGW*WLSHIY
Trigger: GTATATGTGGGACAGCCATCACCAGCCAGTATTTGG...TGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR TCA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACATGAAGAATAAACCATaGCAGAGCCATCAACACAGG +
Preference number: 4 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHMKNKP*QSHQHR
Trigger: CCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCAT...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCCAATACATCACTCCCTaGATTGTCTTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFQYITP*IVFPPC
Trigger: GCAGGGAGGGAAGACAATTCAGGGAGTGATGTATTG...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACAAACTGTTGGAGAGTATaGCCTGGGACTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETNCWRV*PGTETV
Trigger: CACAGTTTCAGTCCCAGGTCATACTCTCCAACAGTT...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCCATACACAGGGCAAATaGCACGAACAGCAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: CGKVPRFTALQFNACIVLHTQGK*HEQQGN
Trigger: ATTGCCCTGCTGTTCGTGGCATTTGCCCTGTGTATG...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCCCGGAGTTGAGACCTTaGTTCATTTTCCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFPELRP*FIFLGC
Trigger: ACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGG...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCCTTTCTGCCAAATACTaGCTGGTGATGGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFLSAKY*LVMAVP
Trigger: TGGGACAGCCATCACCAGCCAGTATTTGGCAGAAAG...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCGCCACGGCGATGAAGTaGATCACTCTGTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFATAMK*ITLYLA
Trigger: TGCAAGATACAGAGTGATCCACTTCATCGCCGTGGC...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATAGCAGAGTGGGTCTCCTaGAGGTTCTCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPRFTALQFNACIVLTLIAEWVS*RFSSSF
Trigger: GAAGCTGGAGGAGAACCTCCAGGAGACCCACTCTGC...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGTCCCACATATACACAAGGACAACATCTGACCCAGGGCAATTGTTTTCAAAATTCTCTGGTCTCTCTGTaGTTTGGCAGCGTAACCCTC +
Preference number: 4 (lower is better)
Translates to: CPTYTQGQHLTQGNCFQNSLVSL*FGSVTL
Trigger: GAGGGTTACGCTGCCAAACCACAGAGAGACCAGAGA...ATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp TGTCCCACATATACACAAGGACAACATCTGACCCAGGGCAATTGTTTTCAAAATCACAGAATCCTGCTGTaGTTTGGACTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CPTYTQGQHLTQGNCFQNHRILL*FGLLAP
Trigger: AGGAGCCAGGAGTCCAAACCACAGCAGGATTCTGTG...ATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp CACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACTTTTCTGTCAAGCCCTTTGTaGCGTGGATGGAGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HRNTLLAWFLLYFGISTFLSSPL*RGWRRG
Trigger: GCCACGCCTCCATCCACGCCACAAAGGGCTTGACAG...AAAAGTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
3UTR CAA 72 bp TGCTCAGCTTCTTCACGATGTATTCCTCACAAACATTaGAAATGGCATAGAGGGAAGCCCCAAGAAGGACCA +
Preference number: 4 (lower is better)
Translates to: CSASSRCIPHKH*KWHRGKPQEGP
Trigger: TGGTCCTTCTTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAATACATCGTGAAGAAGCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR TCA 90 bp TATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAGCAAGGTTATCACTGCCTaGTCGAAATGCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: YHCLIEMPASLYKLGTASKVITA*SKCQHH
Trigger: GTGATGCTGGCATTTCGATCAGGCAGTGATAACCTT...GCTTGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR TCA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACTCTGGGACCTGGAATaGGTGATGGAGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETLWDLE*VMEKCF
Trigger: AAAACATTTCTCCATCACTCATTCCAGGTCCCAGAG...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp GCCATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGAGTTCTAAAAGGTTATCACTaGCAGGTGAAGAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: AINTGIPKQSKSWTLVRVLKGYH*QVKSLP
Trigger: AGGCAAACTCTTCACCTGGCAGTGATAACCTTTTAG...AACTCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CCA 90 bp CACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACTTTTCCCAATGCTGGTGACTaGAGGCACGCTGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HRNTLLAWFLLYFGISTFPNAGD*RHAAFS
Trigger: GCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGG...AAAAGTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACACTATGAAGAATAAACCATaGCAGAGCCATCAACACAGG +
Preference number: 4 (lower is better)
Translates to: HLISSTRTDIGPQTQKHTMKNKP*QSHQHR
Trigger: CCTGTGTTGATGGCTCTGTCATGGTTTATTCTTCAT...AGTGTGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CAAACACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACAGACTTTTCAAGGGCTaGCCCACCCGTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QTQKHTLSLVSALFWYFYRLFKG*PTRFLP
Trigger: TGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCT...GTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTCTGGGACCTGGAATaGGTGATGGAGAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTLWDLE*VMEKCF
Trigger: AAAACATTTCTCCATCACTCATTCCAGGTCCCAGAG...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCAAGCATATTCACAGAATCCTaGTGTGGTTTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: YHCLIEMPASLYKLGTASIFTES*CGLDSW
Trigger: CCAGGAGTCCAAACCACAGCAGGATTCTGTGAATAT...GCTTGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CCA 90 bp ATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGAGTTGTGAAGCAATCCAAAAGCTaGACACTGGTTAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: INTGIPKQSKSWTLVRVVKQSKS*TLVRVV
Trigger: CACAACTCTAACCAGTGTCCAGCTTTTGGATTGCTT...CACAACTCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524991.1
ENST00000533664.1
CDS-3UTR CCA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGAACACGAACAGATATTaGTCCTCAAACACAGAAACA +
Preference number: 4 (lower is better)
Translates to: LISQDFSRADPPVFCHMQNTNRY*SSNTET
Trigger: TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTT...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAGCATCTACATATATATaGAGCTCTGAAAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: GVCTSSPQHEQILVLKHRASTYI*SSENCW
Trigger: CCAACAGTTTTCAGAGCTCCATATATATGTAGATGC...TCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp CACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACTTTTAGACAGCCACGGCGATaGAGTGGATCACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: HRNTLLAWFLLYFGISTFRQPRR*SGSLCI
Trigger: GATACAGAGTGATCCACTTCATCGCCGTGGCTGTCT...AAAAGTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCTTCCTCACAAACATTTaGAATGGCATAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CGKVPRFTALQFNACIVLFLTNI*NGIEGS
Trigger: GCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAA...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATACTGAGCTTGCACCACTaGACTCTAGACTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: VPRFTALQFNACIVLTLILSLHH*TLDSAS
Trigger: AGATGCAGAGTCTAGAGTGCAGTGGTGCAAGCTCAG...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCCACAAACATTTGAAATaGCATAGAGGGAAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: CGKVPRFTALQFNACIVLHKHLK*HRGKPQ
Trigger: TTGGGGCTTCCCTCTATGCCATTTCAAATGTTTGTG...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACAGACTTTAATCACCAATaGCATGAAGCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTDFNHQ*HEAVQA
Trigger: TGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTC...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACATATTCCAGGAGGTCGTaGGAAGTTTTTAGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GKVPRFTALQFNACIVLTYSRRS*EVFRKD
Trigger: ATCCTTTCTAAAAACTTCTCACGACCTCCTGGAATA...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACAGCTTTTTCTTTGTTGTaGTACTGTGCACTAAGACTT +
Preference number: 4 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETAFSLL*YCALRL
Trigger: AAGTCTTAGTGCACAGTATCACAACAAAGAAAAAGC...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR GCA 90 bp TGTCCCACATATACACAAGGACAACATCTGACCCAGGGCAATTGTTTTCAAAATCTAAAAGGTTATCACTaGCTGATCGAAATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPTYTQGQHLTQGNCFQNLKGYH*LIEMPA
Trigger: TGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAG...ATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR GCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTCCAGTCCCAATGAATaGTGGCAATATCCTTATATT +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFSSPNE*WQYPYI
Trigger: AATATAAGGATATTGCCAGCATTCATTGGGACTGGA...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CCA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCGCATCTACATATATATaGAGCTCTGAAAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: IVLTLISQDFSRADPPVFASTYI*SSENCW
Trigger: CCAACAGTTTTCAGAGCTCCATATATATGTAGATGC...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATATTCCTCACAAACATTTaGAATGGCATAGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPRFTALQFNACIVLTLIFLTNI*NGIEGS
Trigger: GCTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAA...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp AATAGCTGTATACCACTGATAATTGTTCCAAACAGGCCCACCATTCCTAAAAACACTCTGTATCTTGCATaGAGAATAAACCATGACAGA +
Preference number: 4 (lower is better)
Translates to: NSCIPLIIVPNRPTIPKNTLYLA*RINHDR
Trigger: TCTGTCATGGTTTATTCTTCATGCAAGATACAGAGT...GTTTTTAGGAATGGTGGGCCTGTTTGGAACAATTATCAGTGGTATACAGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR TCA 90 bp CAAACACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACACTCTGTATCTTGCATaGAGAATAAACCATGACAGA +
Preference number: 4 (lower is better)
Translates to: QTQKHTLSLVSALFWYFYTLYLA*RINHDR
Trigger: TCTGTCATGGTTTATTCTTCATGCAAGATACAGAGT...GTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR TCA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATAATATATATGGAGCTCTaGAAACTGTTGGAGAGTATG +
Preference number: 4 (lower is better)
Translates to: VPRFTALQFNACIVLTLIIYMEL*KLLESM
Trigger: CATACTCTCCAACAGTTTTCAGAGCTCCATATATAT...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS GCA 90 bp CGGGAGGCGGTGCCTGTGCGGCCGGCTGGGGCTCCGCTCTGGCCCTaGGCTCCCTCCCTCGCTCGCTTGCTCGCGTCCCTCTCGCTCCTC +
Preference number: 5 (lower is better)
Translates to: REAVPVRPAGAPLWP*APSLARLLASLSLL
Trigger: GAGGAGCGAGAGGGACGCGAGCAAGCGAGCGAGGGAGGGAGCGCAGGGCCAGAGCGGAGCCCCAGCCGGCCGCACAGGCACCGCCTCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp GCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTCCTCCATCGGCGCCCTaGCGCGTCTCCGGCGCCCAA +
Preference number: 5 (lower is better)
Translates to: AGDWRHAAFSRLGRASRGPPSAP*RVSGAQ
Trigger: TTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAGG...ACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CAA 90 bp ACTGGAGGCACGCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGAGCTTCAGCCCCAGGTaGTCAATCCCAATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TGGTLLSAGSAVRVGVEQSFSPR*SIPMLV
Trigger: CACCAGCATTGGGATTGACAACCTGGGGCTGAAGCT...CTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGCGTGCCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS GCA 90 bp CGCGGTGTGTTGGTTTTGTCTTTCAGTATTCAGTTGTCTCCGCCGTaGCAGGGAGAGAGACGGTGCCAACCCCCGGCGCTCGGCTTGGAT +
Preference number: 5 (lower is better)
Translates to: RGVLVLSFSIQLSPP*QGERRCQPPALGLD
Trigger: ATCCAAGCCGAGCGCCGGGGGTTGGCACCGTCTCTCTCCCTGGCACGGCGGAGACAACTGAATACTGAAAGACAAAACCAACACACCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp GCTGCTTTCAGCCGGCTCGGCCGTGCGAGTAGGGGTGGAGCAGTACAGGATAAAGTCAGGATGCCCAGGTaGACGGAAGTGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: AAFSRLGRASRGGAVQDKVRMPR*TEVALV
Trigger: CACTAGTGCCACTTCCGTCAACCTGGGCATCCTGAC...TTTATCCTGTACTGCTCCACCCCTACTCGCACGGCCGAGCCGGCTGAAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CAA 90 bp TGGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTGGGCAGGCAGATCACTaGAGGTCGGGAGGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: WWGMGAPSSPATRQQSGSGQADH*RSGGQD
Trigger: GTCTTGACCTCCCGACCTCAAGTGATCTGCCTGCCC...AGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp GGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGACCTCCATCGGCGCCCTaGCGCGTCTCCGGCGCCCAA +
Preference number: 5 (lower is better)
Translates to: GVCTSSPQHEQILVLKHRPPSAP*RVSGAQ
Trigger: TTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAGG...TCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CCA 90 bp GGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCCTaGAGGTTCTCCTCCAGCTTCAGCCCCAGGTTGTCAATCCCAATG +
Preference number: 5 (lower is better)
Translates to: GCAIFSSYKTAEWVS*RFSSSFSPRLSIPM
Trigger: CATTGGGATTGACAACCTGGGGCTGAAGCTGGAGGAGAACCTCCAGGAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp CCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTCCTCAACACGTCAGGATGCCCAGGTaGACGGAAGTGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: PLVPLRPQCGVCTSSPQHVRMPR*TEVALV
Trigger: CACTAGTGCCACTTCCGTCAACCTGGGCATCCTGAC...GTGTTGAGGAGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp GGTGGGGGATGGGTGCGCCATCTTCTCCAGCTACAAGACAGCAGAGTGGGTCTCCTGACCCTCCCGGAGTaGAGACCTTGCTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: GGGWVRHLLQLQDSRVGLLTLPE*RPCFIF
Trigger: GAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAG...GAGACCCACTCTGCTGTCTTGTAGCTGGAGAAGATGGCGCACCCATCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp CCTGCTTTCCCACTGGTGCCTCTAAGACCCCAGTGTGGAGTCTGCACCTCATCTAGCTTCAGCCCCAGGTaGTCAATCCCAATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PAFPLVPLRPQCGVCTSSSFSPR*SIPMLV
Trigger: CACCAGCATTGGGATTGACAACCTGGGGCTGAAGCT...AGATGAGGTGCAGACTCCACACTGGGGTCTTAGAGGCACCAGTGGGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS CCA 90 bp TCATTGGCTGACCCTCCCGGAGTTGAGACCTTGCTTCATTTTCCTTaGTTGTTGCTGCTGTCACGTCTTCCCGCCACGCCCACTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLADPPGVETLLHFP*LLLLSRLPATPTFL
Trigger: CAGGAAAGTGGGCGTGGCGGGAAGACGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAGCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp CAGGTTGTCAATCCCAATGCTGGTGACTGGAGGCACGCTGCTTTCAGCCGGCTCTTCCAGGTGAAGAGTTaGCCTTTTATCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: QVVNPNAGDWRHAAFSRLFQVKS*PFILRS
Trigger: GCTGCGCAGGATAAAAGGCAAACTCTTCACCTGGAA...GAGCCGGCTGAAAGCAGCGTGCCTCCAGTCACCAGCATTGGGATTGACAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR CAA 90 bp TGCCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATCTTTCAGTATTCAGTaGTCTCCGCCGTGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CHMQSAPRPHLYPKACGQSFSIQ*SPPCQG
Trigger: TCCCTGGCACGGCGGAGACAACTGAATACTGAAAGA...TTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp CCACATGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACATCACTCCCTGAATaGTCTTCCCTCCCTGCTAGT +
Preference number: 5 (lower is better)
Translates to: PHAVSPKASSVPKGLWTITSLPE*SSLPAS
Trigger: ACTAGCAGGGAGGGAAGACAATTCAGGGAGTGATGT...TATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp CTTTTCAAGATTACTAAAAGGTTATCACTGCCTGATCGAAATGCCAGCATCACTCCTCCATCGGCGCCCTaGCGCGTCTCCGGCGCCCAA +
Preference number: 5 (lower is better)
Translates to: LFKITKRLSLPDRNASITPPSAP*RVSGAQ
Trigger: TTGGGCGCCGGAGACGCGCAAGGGCGCCGATGGAGG...AGTGATGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAGTAATCTTGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CAA 90 bp GTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCCTCATTCCAGGTGAAGAGTTaGCCTTTTATCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: VSPKASSVPKGLWTITASFQVKS*PFILRS
Trigger: GCTGCGCAGGATAAAAGGCAAACTCTTCACCTGGAA...TGAGGCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCTACAGTAAGCTGAGCTaGCACCACTGCACTCTAGAC +
Preference number: 5 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCYSKLS*HHCTLD
Trigger: GTCTAGAGTGCAGTGGTGCAAGCTCAGCTTACTGTA...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TTCGGAGGCCGAGGTGGGCAGATCGCTTTAGCTCAGGAATTTGAGATTAGCCTGCATTTTCCTTGGTTGTaGCTGCTGTCACGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: FGGRGGQIALAQEFEISLHFPWL*LLSRLP
Trigger: GGGAAGACGTGACAGCAGCAACAACCAAGGAAAATG...CAGGCTAATCTCAAATTCCTGAGCTAAAGCGATCTGCCCACCTCGGCCTCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS GCA 90 bp TTATCAGTGAGTTTTCATTGGCTGACCCTCCCGGAGTTGAGACCTTaGTTCATTTTCCTTGGTTGTTGCTGCTGTCACGTCTTCCCGCCA +
Preference number: 5 (lower is better)
Translates to: LSVSFHWLTLPELRP*FIFLGCCCCHVFPP
Trigger: TGGCGGGAAGACGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAGCCAATGAAAACTCACTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp GTGACTTTAATCACCAATGGCATGAAGCTGTACAGGCAAAACATACACAGGGCAGTCAGGATGCCCAGGTaGACGGAAGTGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: VTLITNGMKLYRQNIHRAVRMPR*TEVALV
Trigger: CACTAGTGCCACTTCCGTCAACCTGGGCATCCTGAC...TGCCCTGTGTATGTTTTGCCTGTACAGCTTCATGCCATTGGTGATTAAAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CAA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCGGGCAGGCAGATCACTaGAGGTCGGGAGGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: IVLTLISQDFSRADPPVFGQADH*RSGGQD
Trigger: GTCTTGACCTCCCGACCTCAAGTGATCTGCCTGCCC...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TGCAGTCAGCCCCAAGGCCTCATCTGTACCCAAAGGCCTGTGGACAATAACTGCATTCCTCGCGGTGTGTaGGTTTTGTCTTTCAGTATT +
Preference number: 5 (lower is better)
Translates to: CSQPQGLICTQRPVDNNCIPRGV*VLSFSI
Trigger: AATACTGAAAGACAAAACCAACACACCGCGAGGAAT...GCAGTTATTGTCCACAGGCCTTTGGGTACAGATGAGGCCTTGGGGCTGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACAGTCAGGATGCCCAGGTaGACGGAAGTGGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: GKVPRFTALQFNACIVLTVRMPR*TEVALV
Trigger: CACTAGTGCCACTTCCGTCAACCTGGGCATCCTGAC...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp CTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCTGCCACATGCAGTTCCAGGTGAAGAGTTaGCCTTTTATCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LISQDFSRADPPVFCHMQFQVKS*PFILRS
Trigger: GCTGCGCAGGATAAAAGGCAAACTCTTCACCTGGAA...CTGCATGTGGCAGAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp GCCCCAAGAAGGACCAAGATGTCACCAATCAATACATCACTCCCTGAATTGTCTTGCCAGGTGAAGAGTTaGCCTTTTATCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: APRRTKMSPINTSLPELSCQVKS*PFILRS
Trigger: GCTGCGCAGGATAAAAGGCAAACTCTTCACCTGGCA...AGACAATTCAGGGAGTGATGTATTGATTGGTGACATCTTGGTCCTTCTTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CAA 90 bp AGTAGGGGTGGAGCAGTACAGGATAAACCCCACCATGATGACAGTGAAGGACAGATGGGGGTGTTCACTTaGTATCTTTCTGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: SRGGAVQDKPHHDDSEGQMGVFT*YLSAKY
Trigger: GTATTTGGCAGAAAGATACAAAGTGAACACCCCCAT...CTGTCCTTCACTGTCATCATGGTGGGGTTTATCCTGTACTGCTCCACCCCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532513.2
CDS-3UTR CAA 90 bp GTAGGGGTGGAGCAGTACAGGATAAACCCCACCATGATGACAGTGAAGGACAGGATTCCTCACAAACATTaGAAATGGCATAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VGVEQYRINPTMMTVKDRIPHKH*KWHRGK
Trigger: CTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAAT...CCTGTCCTTCACTGTCATCATGGTGGGGTTTATCCTGTACTGCTCCACCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532513.2
ENST00000533664.1
CDS-3UTR CAA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACAAGCTTCAGCCCCAGGTaGTCAATCCCAATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GKVPRFTALQFNACIVLTSFSPR*SIPMLV
Trigger: CACCAGCATTGGGATTGACAACCTGGGGCTGAAGCT...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TGTCCCACATATACACAAGGACAACATCTGACCCAGGGCAATTGTTTTCAAAATGAATCCTGCTGTGGTTaGGACTCCTGGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: CPTYTQGQHLTQGNCFQNESCCG*DSWLLL
Trigger: CAGCAGGAGCCAGGAGTCCAAACCACAGCAGGATTC...ATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CAA 90 bp TCCTTTCTAAAACCTAACCACTGGATCCAACCCAGGGTTGTAGAGTGTCCATTCATCAGTGAGTTTTCATaGGCTGACCCTCCCGGAGTT +
Preference number: 5 (lower is better)
Translates to: SFLKPNHWIQPRVVECPFISEFS*ADPPGV
Trigger: AACTCCGGGAGGGTCAGCCAATGAAAACTCACTGAT...GAATGGACACTCTACAACCCTGGGTTGGATCCAGTGGTTAGGTTTTAGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS TCA 90 bp TACTGGCTGGTGATGGCTGTCCCACATATACACAAGGACAACATCTaGCCCAGGGCAATTGTTTTCAAAATATTCCTGGTGTGCGTGTTG +
Preference number: 5 (lower is better)
Translates to: YWLVMAVPHIHKDNI*PRAIVFKIFLVCVL
Trigger: CAACACGCACACCAGGAATATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACAGCCATCACCAGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375682.8
CDS-3UTR CAA 90 bp TGTGGAGTCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACATGGGGGTGTTCACTTaGTATCTTTCTGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: CGVCTSSPQHEQILVLKHMGVFT*YLSAKY
Trigger: GTATTTGGCAGAAAGATACAAAGTGAACACCCCCAT...GTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGACTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS TCA 90 bp TACTGGCTGGTGATGGCTGTCCCACATATACACAAGGACAACATCTaGCCCAGGGCAATTGTTTTCAAAATATTCCAGGTGAAGAGTTTG +
Preference number: 5 (lower is better)
Translates to: YWLVMAVPHIHKDNI*PRAIVFKIFQVKSL
Trigger: CAAACTCTTCACCTGGAATATTTTGAAAACAATTGCCCTGGGTCAGATGTTGTCCTTGTGTATATGTGGGACAGCCATCACCAGCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525071.5
ENST00000525815.6
ENST00000532513.2
CDS-3UTR CAA 90 bp GGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTGCTTCATTTTCCTaGGTTGTTGCTGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: GKVPRFTALQFNACIVLTLASFS*VVAAVT
Trigger: CGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAG...TGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp ATCAACACAGGAATCCCAAAGCAATCCAAAAGCTGGACACTGGTTAGAGTTGTGATGGGGGTGTTCACTTaGTATCTTTCTGCCAAATAC +
Preference number: 5 (lower is better)
Translates to: INTGIPKQSKSWTLVRVVMGVFT*YLSAKY
Trigger: GTATTTGGCAGAAAGATACAAAGTGAACACCCCCAT...CACAACTCTAACCAGTGTCCAGCTTTTGGATTGCTTTGGGATTCCTGTGTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CAA 90 bp GTAATAGCATTGTCTTTTAACAGCTGGAGGCTCCCAGGCATACTCTTTGGTGAGATTCCTCACAAACATTaGAAATGGCATAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VIALSFNSWRLPGILFGEIPHKH*KWHRGK
Trigger: CTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAAT...CTCACCAAAGAGTATGCCTGGGAGCCTCCAGCTGTTAAAAGACAATGCTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TCTGCACCTCATCTCCTCAACACGAACAGATATTGGTCCTCAAACACAGAAACACAACACGAACAGATATaGGTCCTCAAACACAGAAAC +
Preference number: 5 (lower is better)
Translates to: SAPHLLNTNRYWSSNTETQHEQI*VLKHRN
Trigger: GTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTG...TGTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTGAGGAGATGAGGTGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp TGTGGGAAGGTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCCTTCATTTTCCTTGGTaGTTGCTGCTGTCACGTCTT +
Preference number: 5 (lower is better)
Translates to: CGKVPRFTALQFNACIVLLHFPW*LLLSRL
Trigger: AAGACGTGACAGCAGCAACAACCAAGGAAAATGAAG...GAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAACCTTCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp TTAATCACCAATGGCATGAAGCTGTACAGGCAAAACATACACAGGGCAAATGCCATTCCTCACAAACATTaGAAATGGCATAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LITNGMKLYRQNIHRANAIPHKH*KWHRGK
Trigger: CTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAAT...GGCATTTGCCCTGTGTATGTTTTGCCTGTACAGCTTCATGCCATTGGTGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533664.1
CDS-3UTR CAA 90 bp CTTTTCAAGATTACTAAAAGGTTATCACTGCCTGATCGAAATGCCAGCATCACTATTCAGGTGAAGAGTTaGCCTTTTATCCTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: LFKITKRLSLPDRNASITIQVKS*PFILRS
Trigger: GCTGCGCAGGATAAAAGGCAAACTCTTCACCTGAAT...AGTGATGCTGGCATTTCGATCAGGCAGTGATAACCTTTTAGTAATCTTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CAA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATACCCGGAGTTGAGACCTaGCTTCATTTTCCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: VPRFTALQFNACIVLTLIPGVET*LHFPWL
Trigger: CAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGG...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS-3UTR CAA 90 bp CACAGAAACACACTCTTAGCTTGGTTTCTGCTCTATTTTGGTATTTCTACTTTTACATCACTCCCTGAATaGTCTTCCCTCCCTGCTAGT +
Preference number: 5 (lower is better)
Translates to: HRNTLLAWFLLYFGISTFTSLPE*SSLPAS
Trigger: ACTAGCAGGGAGGGAAGACAATTCAGGGAGTGATGT...AAAAGTAGAAATACCAAAATAGAGCAGAAACCAAGCTAAGAGTGTGTTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp ATAGTACTCACACTTATATCTCAAGACTTTTCAAGGGCTGACCCACCCGTTTTCATTCCTCACAAACATTaGAAATGGCATAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: IVLTLISQDFSRADPPVFIPHKH*KWHRGK
Trigger: CTTCCCTCTATGCCATTTCAAATGTTTGTGAGGAAT...GAAAACGGGTGGGTCAGCCCTTGAAAAGTCTTGAGATATAAGTGTGAGTACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS-3UTR CAA 90 bp GGTTATCACTGCCTGATCGAAATGCCAGCATCACTGTATAAATTAGGAACAGCATCTGACCCAGGGCAATaGTTTTCAAAATATTCACAG +
Preference number: 5 (lower is better)
Translates to: GYHCLIEMPASLYKLGTASDPGQ*FSKYSQ
Trigger: CTGTGAATATTTTGAAAACAATTGCCCTGGGTCAGA...TGCTGTTCCTAATTTATACAGTGATGCTGGCATTTCGATCAGGCAGTGATAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524991.1
CDS-3UTR CAA 90 bp GTTCCTAGGTTTACTGCACTCCAGTTTAATGCTTGTATAGTACTCACACTTATACAACACGAACAGATATaGGTCCTCAAACACAGAAAC +
Preference number: 5 (lower is better)
Translates to: VPRFTALQFNACIVLTLIQHEQI*VLKHRN
Trigger: GTTTCTGTGTTTGAGGACCAATATCTGTTCGTGTTG...TATAAGTGTGAGTACTATACAAGCATTAAACTGGAGTGCAGTAAACCTAGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525071.5
ENST00000525815.6
CDS GCA 72 bp CCCCCGAAGTGCCGGGTCCCGGAAGACGGGAGGCGGTaGCTGTGCGGCCGGCTGGGGCTCCGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: PPKCRVPEDGRR*LCGRLGLRSGP
Trigger: AGGGCCAGAGCGGAGCCCCAGCCGGCCGCACAGGCACCGCCTCCCGTCTTCCGGGACCCGGCACTTCGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS GCA 72 bp GTGCCTGTGCGGCCGGCTGGGGCTCCGCTCTGGCCCTaGGCTCCCTCCCTCGCTCGCTTGCTCGCGTCCCTC +
Preference number: 6 (lower is better)
Translates to: VPVRPAGAPLWP*APSLARLLASL
Trigger: GAGGGACGCGAGCAAGCGAGCGAGGGAGGGAGCGCAGGGCCAGAGCGGAGCCCCAGCCGGCCGCACAGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS GCA 72 bp TTGGTTTTGTCTTTCAGTATTCAGTTGTCTCCGCCGTaGCAGGGAGAGAGACGGTGCCAACCCCCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LVLSFSIQLSPP*QGERRCQPPAL
Trigger: GAGCGCCGGGGGTTGGCACCGTCTCTCTCCCTGGCACGGCGGAGACAACTGAATACTGAAAGACAAAACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CAA 90 bp CCCTTTGTGGCGTGGATGGAGGCGTGGCTCATTCCTCGCGGTGTGTaGGTTTTGTCTTTCAGTATTCAGTTGTCTCCGCCGTGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: PFVAWMEAWLIPRGV*VLSFSIQLSPPCQG
Trigger: TCCCTGGCACGGCGGAGACAACTGAATACTGAAAGACAAAACCAACACACCGCGAGGAATGAGCCACGCCTCCATCCACGCCACAAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CAA 72 bp GCGTGGATGGAGGCGTGGCTCATTCCTCGCGGTGTGTaGGTTTTGTCTTTCAGTATTCAGTTGTCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: AWMEAWLIPRGV*VLSFSIQLSPP
Trigger: CGGCGGAGACAACTGAATACTGAAAGACAAAACCAACACACCGCGAGGAATGAGCCACGCCTCCATCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CCA 72 bp TTAACTGTCAAGCCCTTTGTGGCGTGGATGGAGGCGTaGCTCATTCCTCGCGGTGTGTTGGTTTTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: LTVKPFVAWMEA*LIPRGVLVLSF
Trigger: GAAAGACAAAACCAACACACCGCGAGGAATGAGCCACGCCTCCATCCACGCCACAAAGGGCTTGACAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CAA 90 bp GTTATCAGTGAGTTTTCATTGGCTGACCCTCCCGGAGTTGAGACCTaGCTTCATTTTCCTTGGTTGTTGCTGCTGTCACGTCTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: VISEFSLADPPGVET*LHFPWLLLLSRLPA
Trigger: GGCGGGAAGACGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAGCCAATGAAAACTCACTGATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS GCA 72 bp AGTTTTCATTGGCTGACCCTCCCGGAGTTGAGACCTTaGTTCATTTTCCTTGGTTGTTGCTGCTGTCACGTC +
Preference number: 6 (lower is better)
Translates to: SFHWLTLPELRP*FIFLGCCCCHV
Trigger: GACGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAGCCAATGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5
CDS CAA 90 bp TCAACAAGGTTATCAGTGAGTTTTCATTGGCTGACCCTCCCGGAGTaGAGACCTTGCTTCATTTTCCTTGGTTGTTGCTGCTGTCACGTC +
Preference number: 6 (lower is better)
Translates to: STRLSVSFHWLTLPE*RPCFIFLGCCCCHV
Trigger: GACGTGACAGCAGCAACAACCAAGGAAAATGAAGCAAGGTCTCAACTCCGGGAGGGTCAGCCAATGAAAACTCACTGATAACCTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525071.5