RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116704

Ensembl transcript IDs: ENST00000235345.6

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCTCCTAGGGAACCTGACCCCCAAGAGGCAGTTCAACTCCTGGTaGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGCCTTTC +
Preference number: 1 (lower is better)
Translates to: DLLGNLTPKRQFNSW*GSSPTPVKDTQKPF
Trigger: GAAAGGCTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTGCCTCTTGGGGGTCAGGTTCCCTAGGAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp ATCCAGGAAGCAGAACACAGACAGGGCAAAGTTGCTGTACTGCTCTaGTCAGCCAGAAGTTTCAGCATAAGCCAGGGCTCCCAAGGCACA +
Preference number: 1 (lower is better)
Translates to: IQEAEHRQGKVAVLL*SARSFSISQGSQGT
Trigger: TGTGCCTTGGGAGCCCTGGCTTATGCTGAAACTTCTGGCTGACCAGAGCAGTACAGCAACTTTGCCCTGTCTGTGTTCTGCTTCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR TCA 90 bp TCCAGCTTGTTCACCCTGCTCCATCTTGCAATGCTGGTTAGTGGCTaGAGGATGCATCCAGGAAGCAGAACACAGACAGGGCAAAGTTGC +
Preference number: 1 (lower is better)
Translates to: SSLFTLLHLAMLVSG*RMHPGSRTQTGQSC
Trigger: GCAACTTTGCCCTGTCTGTGTTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp TGTTCACCCTGCTCCATCTTGCAATGCTGGTTAGTGGCTGAAGGATaGATCCAGGAAGCAGAACACAGACAGGGCAAAGTTGCTGTACTG +
Preference number: 1 (lower is better)
Translates to: CSPCSILQCWLVAEG*IQEAEHRQGKVAVL
Trigger: CAGTACAGCAACTTTGCCCTGTCTGTGTTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp ACTATTCAGTCTCCAGCTTGTTCACCCTGCTCCATCTTGCAATGCTaGTTAGTGGCTGAAGGATGCATCCAGGAAGCAGAACACAGACAG +
Preference number: 1 (lower is better)
Translates to: TIQSPACSPCSILQC*LVAEGCIQEAEHRQ
Trigger: CTGTCTGTGTTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGAGACTGAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp ACCAAACCCAAAGGAAGGTGGCAAGGGAAAACAGACTTGCCTGTCTaGAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGT +
Preference number: 1 (lower is better)
Translates to: TKPKGRWQGKTDLPV*NFHLERESMLSCTG
Trigger: ACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGACAGGCAAGTCTGTTTTCCCTTGCCACCTTCCTTTGGGTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp AAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTaGTCCATCTTGCAATGCTGGTTAGTGGCTGAAGGATGCATCCAG +
Preference number: 1 (lower is better)
Translates to: KRKLQKTIQSPACSP*SILQCWLVAEGCIQ
Trigger: CTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp GGGATAAGGGTTCCAGGACAGGGTAAGCTGTCACTCTTCCTGATTTaGAAAGTATGCTCCTCTCTGACACCAAATTCAATCAACTGCTTG +
Preference number: 1 (lower is better)
Translates to: GIRVPGQGKLSLFLI*KVCSSLTPNSINCL
Trigger: CAAGCAGTTGATTGAATTTGGTGTCAGAGAGGAGCATACTTTGCAAATCAGGAAGAGTGACAGCTTACCCTGTCCTGGAACCCTTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp CATAAAGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATaGTGGCAATGTGTAGCCTGGCCAACTAGGGTTATTCCAATCCAT +
Preference number: 1 (lower is better)
Translates to: HKVHSHMRQLKLNGT*WQCVAWPTRVIPIH
Trigger: ATGGATTGGAATAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp GGCGTCCCTAAAATCAGTGATACTCATAACCATGCAGGCAGCTCTTaGTTACAAAATCACGGACTCCTTTCATCTGTCTCCTTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: GVPKISDTHNHAGSS*LQNHGLLSSVSFLP
Trigger: TGGGAGAAAGGAGACAGATGAAAGGAGTCCGTGATTTTGTAACCAAGAGCTGCCTGCATGGTTATGAGTATCACTGATTTTAGGGACGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR TCA 90 bp TCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAACAATTTaGATGATGAAGCTCCAGTTGGCAAACATTACATATGCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: SSRGKAKLPPDAATI*MMKLQLANITYAAL
Trigger: GAGAGCTGCATATGTAATGTTTGCCAACTGGAGCTTCATCATTCAAATTGTTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp CAGAGTCCAGTGGATTCCAAACCCAATGAAATAGACACTGGTGTGTaGATTAGTGCAAAGGTACCAAATCTCTTGCACACTGGCTGTACA +
Preference number: 1 (lower is better)
Translates to: QSPVDSKPNEIDTGV*ISAKVPNLLHTGCT
Trigger: TGTACAGCCAGTGTGCAAGAGATTTGGTACCTTTGCACTAATGCACACACCAGTGTCTATTTCATTGGGTTTGGAATCCACTGGACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp ATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTAGCCTaGCCAACTAGGGTTATTCCAATCCATTTAGCCTTGACTAGAAGC +
Preference number: 1 (lower is better)
Translates to: MRQLKLNGTCWQCVA*PTRVIPIHLALTRS
Trigger: GCTTCTAGTCAAGGCTAAATGGATTGGAATAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp AAAGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTaGCAATGTGTAGCCTGGCCAACTAGGGTTATTCCAATCCATTTA +
Preference number: 1 (lower is better)
Translates to: KVHSHMRQLKLNGTC*QCVAWPTRVIPIHL
Trigger: TAAATGGATTGGAATAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR TCA 90 bp AACAGAGCTAAATTCTCAACCTTACCTGAGTCACTATGGCAGGAGTaGGATGTTTCAACTACCTCTGCAAACATCTCTGTATCCCCAGCA +
Preference number: 1 (lower is better)
Translates to: NRAKFSTLPESLWQE*DVSTTSANISVSPA
Trigger: TGCTGGGGATACAGAGATGTTTGCAGAGGTAGTTGAAACATCTCACTCCTGCCATAGTGACTCAGGTAAGGTTGAGAATTTAGCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp TTGCCTGTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTaGACTGGTTTACAAAACACAGCTCTTTACTTGTACCTCATCTCA +
Preference number: 1 (lower is better)
Translates to: LPVCNFHLERESMLS*TGLQNTALYLYLIS
Trigger: TGAGATGAGGTACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGACAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 90 bp CAAGGGGCACATGATGTAGGTGAGAATGTTGAAAGGAGGGAAGTTTaGTCATTGCTCATGCCATTTAAGAAGGAAGATGATAGCTCTAAC +
Preference number: 1 (lower is better)
Translates to: QGAHDVGENVERREV*SLLMPFKKEDDSSN
Trigger: GTTAGAGCTATCATCTTCCTTCTTAAATGGCATGAGCAATGAGCAAACTTCCCTCCTTTCAACATTCTCACCTACATCATGTGCCCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp TCTCACTATGCCCTTTCACTGTACCTAAGCAAAACCAGGAAGTGTTaGCAACATTTACAGCCAGAAGTGCATTATCAACTAAAGTCAGCC +
Preference number: 1 (lower is better)
Translates to: SHYALSLYLSKTRKC*QHLQPEVHYQLKSA
Trigger: GGCTGACTTTAGTTGATAATGCACTTCTGGCTGTAAATGTTGCCAACACTTCCTGGTTTTGCTTAGGTACAGTGAAAGGGCATAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp TGTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTaGTTTACAAAACACAGCTCTTTACTTGTACCTCATCTCACATTG +
Preference number: 1 (lower is better)
Translates to: CLQFSLREGVNAELH*FTKHSSLLVPHLTL
Trigger: CAATGTGAGATGAGGTACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 90 bp TTTCTGCCTAGTAAATATCAAACATGGGGCAAAAACCAGACTTTCTaGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACA +
Preference number: 1 (lower is better)
Translates to: FLPSKYQTWGKNQTF*EVPQYQVNHQYIVT
Trigger: TGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAGAAAGTCTGGTTTTTGCCCCATGTTTGATATTTACTAGGCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGCAACTAAAGTCAGCCTaGAAGTGGGATAAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKQLKSA*KWDKGS
Trigger: GGAACCCTTATCCCACTTCCAGGCTGACTTTAGTTG...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp CTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCCATCTaGCAATGCTGGTTAGTGGCTGAAGGATGCATCCAGGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: LQKTIQSPACSPCSI*QCWLVAEGCIQEAE
Trigger: TTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAGAGGAAAGGCTAAACTaGCTCCAGATGCAGCAACAA +
Preference number: 2 (lower is better)
Translates to: LGGATVPGKSPVYCNTPAEERLN*LQMQQQ
Trigger: TTGTTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTC...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTTTGGATTCACACTATTaGCGGGTAGGTAGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCLDSHY*RVGRAG
Trigger: ACCTGCCCTACCTACCCGGCAATAGTGTGAATCCAA...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTAGGCAATTTAGGCAGTaGCCATTCACAGCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPARQFRQ*PFTAAL
Trigger: GAGAGCAGCTGTGAATGGGCACTGCCTAAATTGCCT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCAGACAGGGCAAAGTTaGTGTACTGCTCTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: GCHFKPTQCETPLFLREDQTGQS*CTALVS
Trigger: GCTGACCAGAGCAGTACAGCAACTTTGCCCTGTCTG...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCATGCTCCATCTTGCAATaGTGGTTAGTGGCTGAAGGA +
Preference number: 2 (lower is better)
Translates to: LGGATVPGKSPVYCNTPACSILQ*WLVAEG
Trigger: TCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCA...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAACTCTGCTCATCCTATaGAAGTCAGGGAAGCCAACA +
Preference number: 2 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQTLLIL*KSGKPT
Trigger: TGTTGGCTTCCCTGACTTTCATAGGATGAGCAGAGT...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAATTCTCAACCTTACCTaGGTCACTATGGCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQILNLT*VTMAGV
Trigger: CACTCCTGCCATAGTGACTCAGGTAAGGTTGAGAAT...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGATAGACACTGGTGTGTaGATTAGTGCAAAGGTACCA +
Preference number: 2 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKIDTGV*ISAKVP
Trigger: TGGTACCTTTGCACTAATGCACACACCAGTGTCTAT...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAAAATCTCTTGCACACTaGCTGTACAACTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQKSLAH*LYNWPE
Trigger: CTCAGGCCAGTTGTACAGCCAGTGTGCAAGAGATTT...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGGTCAACAGAGTCCAGTaGATTCCAAACCCAATGAAA +
Preference number: 2 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKVNRVQ*IPNPMK
Trigger: TTTCATTGGGTTTGGAATCCACTGGACTCTGTTGAC...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTTCCATCTTGCAATGCTaGTTAGTGGCTGAAGGATGC +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPASILQC*LVAEGC
Trigger: GCATCCTTCAGCCACTAACCAGCATTGCAAGATGGA...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp GAGCTTAGCAAAATACTTGGCATACAAGAGCTGCTCACTAAGTCTTaGCTCACTGAACGAGGCTATCAAGTAAGGCAGGCCCAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: ELSKILGIQELLTKS*LTERGYQVRQAQSP
Trigger: AGGACTTTGGGCCTGCCTTACTTGATAGCCTCGTTCAGTGAGCAAAGACTTAGTGAGCAGCTCTTGTATGCCAAGTATTTTGCTAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAATCACTATGGCAGGAGTaGGATGTTTCAACTACCTCT +
Preference number: 2 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQSLWQE*DVSTTS
Trigger: AGAGGTAGTTGAAACATCTCACTCCTGCCATAGTGA...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCGCTGTACAACTGGCCTaGGCAAACACACTAATCCTC +
Preference number: 2 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLAVQLA*ANTLIL
Trigger: GAGGATTAGTGTGTTTGCTCAGGCCAGTTGTACAGC...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAGTTCTCAAATACTCCTaGAGAGGTGACAGATCTCCT +
Preference number: 2 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQVLKYS*RGDRSP
Trigger: AGGAGATCTGTCACCTCTTCAGGAGTATTTGAGAAC...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGGGTCTCACTTACATTaGACAGGAGACACTAGTCAT +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPAGSHLH*TGDTSH
Trigger: ATGACTAGTGTCTCCTGTTCAATGTAAGTGAGACCC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAGAGTCAATGCTGAGCTaGACTGGTTTACAAAACACA +
Preference number: 2 (lower is better)
Translates to: LGGATVPGKSPVYCNTPAESMLS*TGLQNT
Trigger: TGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTC...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAAACTTGGGAGTTGGTTaGAGGGATAATTCTAGGGAC +
Preference number: 2 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQNLGVG*RDNSRD
Trigger: GTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTT...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAATCACATTGCAGCATTTaGATTCACACTATTGCCGGG +
Preference number: 2 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQSHCSI*IHTIAG
Trigger: CCCGGCAATAGTGTGAATCCAAATGCTGCAATGTGA...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp CACTGGTTTACAAAACACAGCTCTTTACTTGTACCTCATCTCACATaGCAGCATTTGGATTCACACTATTGCCGGGTAGGTAGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: HWFTKHSSLLVPHLT*QHLDSHYCRVGRAG
Trigger: ACCTGCCCTACCTACCCGGCAATAGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTACAAGTAAAGAGCTGTGTTTTGTAAACCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp GAAATAGACACTGGTGTGTGCATTAGTGCAAAGGTACCAAATCTCTaGCACACTGGCTGTACAACTGGCCTGAGCAAACACACTAATCCT +
Preference number: 2 (lower is better)
Translates to: EIDTGVCISAKVPNL*HTGCTTGLSKHTNP
Trigger: AGGATTAGTGTGTTTGCTCAGGCCAGTTGTACAGCCAGTGTGCAAGAGATTTGGTACCTTTGCACTAATGCACACACCAGTGTCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATGAGCCTACAAATGATTaGCTCATAAAGTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: GCHFKPTQCETPLFLREDEPTND*LIKSTA
Trigger: GGCTGTGGACTTTATGAGTCAATCATTTGTAGGCTC...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAGGCAAACATTACATATaGAGCTCTCAGGGACACCTG +
Preference number: 2 (lower is better)
Translates to: VCNFHLERESMLSCTGLQGKHYI*SSQGHL
Trigger: CAGGTGTCCCTGAGAGCTGCATATGTAATGTTTGCC...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTACAGACTTGCCTGTCTaGAATTTTCACTTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPATDLPV*NFHLER
Trigger: CCTCTCTAAGTGAAAATTGCAGACAGGCAAGTCTGT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAGAAAGGAGGGAAGTTTaGTCATTGCTCATGCCATTT +
Preference number: 2 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQERREV*SLLMPF
Trigger: AAATGGCATGAGCAATGAGCAAACTTCCCTCCTTTC...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp CAATGTGTAGCCTGGCCAACTAGGGTTATTCCAATCCATTTAGCCTaGACTAGAAGCAGATTGGCCAAAGAGGGTCTCACTTACATTGAA +
Preference number: 2 (lower is better)
Translates to: QCVAWPTRVIPIHLA*TRSRLAKEGLTYIE
Trigger: TTCAATGTAAGTGAGACCCTCTTTGGCCAATCTGCTTCTAGTCAAGGCTAAATGGATTGGAATAACCCTAGTTGGCCAGGCTACACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATTGTCTCTGTAGGAACTaGCAGTGTTCTGAGTTGATT +
Preference number: 2 (lower is better)
Translates to: GCHFKPTQCETPLFLREDCLCRN*QCSELI
Trigger: AATCAACTCAGAACACTGGCAGTTCCTACAGAGACA...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATTGTTTCAACTACCTCTaGAAACATCTCTGTATCCCC +
Preference number: 2 (lower is better)
Translates to: GCHFKPTQCETPLFLREDCFNYL*KHLCIP
Trigger: GGGGATACAGAGATGTTTGCAGAGGTAGTTGAAACA...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAATCCTCAAAGTCAATaGATATCTCTGAGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: LGGATVPGKSPVYCNTPANPQSQ*ISLSQV
Trigger: GACTTGACTCAGAGATATCCATTGACTTTGAGGATT...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 90 bp GAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTaGTACCTCATCTCACATTGCAGCATTTGGATTCACACTATTGCC +
Preference number: 2 (lower is better)
Translates to: ESMLSCTGLQNTALY*YLISHCSIWIHTIA
Trigger: GGCAATAGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGAGCGGCTTTTGAGTGCTaGAACAACTTACTCTTAGTG +
Preference number: 2 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGAAFEC*NNLLLV
Trigger: CACTAAGAGTAAGTTGTTTCAGCACTCAAAAGCCGC...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTAAAAGGACATGGGTTTaGTGTATTAGCAAGTCATCT +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPAKRTWV*CISKSS
Trigger: AGATGACTTGCTAATACATCAAACCCATGTCCTTTT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAGTTGCTGTACTGCTCTaGTCAGCCAGAAGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: VESPASCNGRNCVQQIFLVAVLL*SARSFS
Trigger: GCTGAAACTTCTGGCTGACCAGAGCAGTACAGCAAC...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATGACCAAAACCCTCCATaGATTCTTGATAAAACAGGA +
Preference number: 2 (lower is better)
Translates to: GCHFKPTQCETPLFLREDDQNPP*ILDKTG
Trigger: TCCTGTTTTATCAAGAATCCATGGAGGGTTTTGGTC...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTGAAAGTGCTCAAGTaGACTCAGGATCTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLLKVLK*TQDLFP
Trigger: AGGAAACAGATCCTGAGTTCACTTGAGCACTTTCAA...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGTTTTCCTTGGCAAATaGAATGATGATATGATGAAG +
Preference number: 2 (lower is better)
Translates to: KPTQCETPLFLREDPAPAVFLGK*NDDMMK
Trigger: CTTCATCATATCATCATTCCATTTGCCAAGGAAAAC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR TCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAATACTTTCAAAACACTaGTGTTTCACTGTCGGCATA +
Preference number: 2 (lower is better)
Translates to: VCNFHLERESMLSCTGLQILSKH*CFTVGI
Trigger: TATGCCGACAGTGAAACATCAGTGTTTTGAAAGTAT...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTACAGCATTTAGCACAATaGCTGGCACATATACTTAAA +
Preference number: 2 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVQHLAQ*LAHILK
Trigger: TTTAAGTATATGTGCCAGGCATTGTGCTAAATGCTG...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGAAAACCAGGAAGTGTTaGCAACATTTACAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLKTRKC*QHLQPE
Trigger: TTCTGGCTGTAAATGTTGCCAACACTTCCTGGTTTT...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAATGCTGAGCTGCACTaGTTTACAAAACACAGCTCT +
Preference number: 2 (lower is better)
Translates to: INSEMWDLIIFIQRATKPNAELH*FTKHSS
Trigger: AGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCTACCTCATCTCACATTaGAGCATTTGGATTCACACT +
Preference number: 2 (lower is better)
Translates to: INSEMWDLIIFIQRATKPYLISH*SIWIHT
Trigger: AGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTA...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR GCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAACAGTGAACAGAAACTaGTACCTAAGGATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: VESPASCNGRNCVQQIFLTVNRN*YLRILE
Trigger: CTCTAGAATCCTTAGGTAGCAGTTTCTGTTCACTGT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp GGGAACCTGACCCCCAAGAGGCAGTTCAACTCCTGGTaGGGCTCTAGCCCAACACCTGTTAAAGACACCCAA +
Preference number: 3 (lower is better)
Translates to: GNLTPKRQFNSW*GSSPTPVKDTQ
Trigger: TTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTGCCTCTTGGGGGTCAGGTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp CTAGGGAACCTGACCCCCAAGAGGCAGTTCAACTCCTaGTGGGGCTCTAGCCCAACACCTGTTAAAGACACC +
Preference number: 3 (lower is better)
Translates to: LGNLTPKRQFNS*WGSSPTPVKDT
Trigger: GGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTGCCTCTTGGGGGTCAGGTTCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp TCTCCAGCTTGTTCACCCTGCTCCATCTTGCAATGCTaGTTAGTGGCTGAAGGATGCATCCAGGAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: SPACSPCSILQC*LVAEGCIQEAE
Trigger: TTCTGCTTCCTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp AAGGCTCTTAATGAAGCTTGTAACTTGGGAGTTGGTTaGAGGGATAATTCTAGGGACACAGCACCACCAGCC +
Preference number: 3 (lower is better)
Translates to: KALNEACNLGVG*RDNSRDTAPPA
Trigger: GGCTGGTGGTGCTGTGTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTTACAAGCTTCATTAAGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp CACAGCCACATGAGGCAATTAAAACTCAACGGGACATaGTGGCAATGTGTAGCCTGGCCAACTAGGGTTATT +
Preference number: 3 (lower is better)
Translates to: HSHMRQLKLNGT*WQCVAWPTRVI
Trigger: AATAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp AGCCACATGAGGCAATTAAAACTCAACGGGACATGCTaGCAATGTGTAGCCTGGCCAACTAGGGTTATTCCA +
Preference number: 3 (lower is better)
Translates to: SHMRQLKLNGTC*QCVAWPTRVIP
Trigger: TGGAATAACCCTAGTTGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTCCAATCCATTTAGCCTaGACTAGAAGCAGATTGGCC +
Preference number: 3 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCPIHLA*TRSRLA
Trigger: GGCCAATCTGCTTCTAGTCAAGGCTAAATGGATTGG...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAACAAGGGAAAACAGACTaGCCTGTCTGCAATTTTCAC +
Preference number: 3 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQQGKTD*PVCNFH
Trigger: GTGAAAATTGCAGACAGGCAAGTCTGTTTTCCCTTG...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp AAAGGAAGGTGGCAAGGGAAAACAGACTTGCCTGTCTaGAATTTTCACTTAGAGAGGGAGTCAATGCTGAGC +
Preference number: 3 (lower is better)
Translates to: KGRWQGKTDLPV*NFHLERESMLS
Trigger: GCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGACAGGCAAGTCTGTTTTCCCTTGCCACCTTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCCGTCCCTCCTTCATGTaGCTGACAGAAAGAACAGAA +
Preference number: 3 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLRPSFM*LTERTE
Trigger: TTCTGTTCTTTCTGTCAGCAACATGAAGGAGGGACG...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp CCTCATCTCACATTGCAGCATTTGGATTCACACTATTaGCGGGTAGGTAGGGCAGGTGTTCTTAATCCAATT +
Preference number: 3 (lower is better)
Translates to: PHLTLQHLDSHY*RVGRAGVLNPI
Trigger: AATTGGATTAAGAACACCTGCCCTACCTACCCGGCAATAGTGTGAATCCAAATGCTGCAATGTGAGATGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTCAATCAATCCTCAGATaGTACAAGTGCAAAGGAATG +
Preference number: 3 (lower is better)
Translates to: KPTQCETPLFLREDPAPAQSILR*YKCKGM
Trigger: CATTCCTTTGCACTTGTACAATCTGAGGATTGATTG...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp TTCCAGAGCTTAGCAAAATACTTGGCATACAAGAGCTaGTCACTAAGTCTTTGCTCACTGAACGAGGCTATC +
Preference number: 3 (lower is better)
Translates to: FQSLAKYLAYKS*SLSLCSLNEAI
Trigger: GATAGCCTCGTTCAGTGAGCAAAGACTTAGTGAGCAGCTCTTGTATGCCAAGTATTTTGCTAAGCTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTTTTATAGTGCCAAAGTaGTTTTCCTTGGCAAATGGA +
Preference number: 3 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCFIVPK*FSLANG
Trigger: TCCATTTGCCAAGGAAAACAACTTTGGCACTATAAA...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTCATAGAATTTGTCTTTaGGAATACCACAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: KPTQCETPLFLREDPAPAHRICL*EYHSSS
Trigger: AGATGAGCTGTGGTATTCCAAAAGACAAATTCTATG...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR TCA 72 bp TACCAAATCTCTTGCACACTGGCTGTACAACTGGCCTaGGCAAACACACTAATCCTCAAAGTCAATGGATAT +
Preference number: 3 (lower is better)
Translates to: YQISCTLAVQLA*ANTLILKVNGY
Trigger: ATATCCATTGACTTTGAGGATTAGTGTGTTTGCTCAGGCCAGTTGTACAGCCAGTGTGCAAGAGATTTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp AAAGTGAGTCTAAGGCTCTTAATGAAGCTTGTAACTTaGGAGTTGGTTGCAGGGATAATTCTAGGGACACAG +
Preference number: 3 (lower is better)
Translates to: KVSLRLLMKLVT*ELVAGIILGTQ
Trigger: CTGTGTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTTACAAGCTTCATTAAGAGCCTTAGACTCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp GCCCTTTCACTGTACCTAAGCAAAACCAGGAAGTGTTaGCAACATTTACAGCCAGAAGTGCATTATCAACTA +
Preference number: 3 (lower is better)
Translates to: ALSLYLSKTRKC*QHLQPEVHYQL
Trigger: TAGTTGATAATGCACTTCTGGCTGTAAATGTTGCCAACACTTCCTGGTTTTGCTTAGGTACAGTGAAAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp AGTAAATATCAAACATGGGGCAAAAACCAGACTTTCTaGGAGGTGCCACAGTACCAGGTAAATCACCAGTAT +
Preference number: 3 (lower is better)
Translates to: SKYQTWGKNQTF*EVPQYQVNHQY
Trigger: ATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAGAAAGTCTGGTTTTTGCCCCATGTTTGATATTTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp AAAATCAGTGATACTCATAACCATGCAGGCAGCTCTTaGTTACAAAATCACGGACTCCTTTCATCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: KISDTHNHAGSS*LQNHGLLSSVS
Trigger: GGAGACAGATGAAAGGAGTCCGTGATTTTGTAACCAAGAGCTGCCTGCATGGTTATGAGTATCACTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCTGCCAGTGTTCTGAGTaGATTAAAAACTTAGGCCTA +
Preference number: 3 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLCQCSE*IKNLGL
Trigger: TAGGCCTAAGTTTTTAATCAACTCAGAACACTGGCA...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR TCA 72 bp AAATTCTCAACCTTACCTGAGTCACTATGGCAGGAGTaGGATGTTTCAACTACCTCTGCAAACATCTCTGTA +
Preference number: 3 (lower is better)
Translates to: KFSTLPESLWQE*DVSTTSANISV
Trigger: TACAGAGATGTTTGCAGAGGTAGTTGAAACATCTCACTCCTGCCATAGTGACTCAGGTAAGGTTGAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp TCCATAATCAAGACACCTCAGTGTCTCTGTAGGAACTaGCAGTGTTCTGAGTTGATTAAAAACTTAGGCCTA +
Preference number: 3 (lower is better)
Translates to: SIIKTPQCLCRN*QCSELIKNLGL
Trigger: TAGGCCTAAGTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTTGATTATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp TGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTaGACTGGTTTACAAAACACAGCTCTTTACTTGTAC +
Preference number: 3 (lower is better)
Translates to: CNFHLERESMLS*TGLQNTALYLY
Trigger: GTACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CCA 72 bp ACTGGCCTGAGCAAACACACTAATCCTCAAAGTCAATaGATATCTCTGAGTCAAGTCATAGGGTTATGTTTG +
Preference number: 3 (lower is better)
Translates to: TGLSKHTNPQSQ*ISLSQVIGLCL
Trigger: CAAACATAACCCTATGACTTGACTCAGAGATATCCATTGACTTTGAGGATTAGTGTGTTTGCTCAGGCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCATGATGAAGCTCCAGTaGGCAAACATTACATATGCA +
Preference number: 3 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLMMKLQ*ANITYA
Trigger: TGCATATGTAATGTTTGCCAACTGGAGCTTCATCAT...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAAATGCAGCATTGGTTTaGAGAGAAGTTGGCAAGCTC +
Preference number: 3 (lower is better)
Translates to: VESPASCNGRNCVQQIFLNAALV*REVGKL
Trigger: GAGCTTGCCAACTTCTCTCAAAACCAATGCTGCATT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR GCA 72 bp CATGATGTAGGTGAGAATGTTGAAAGGAGGGAAGTTTaGTCATTGCTCATGCCATTTAAGAAGGAAGATGAT +
Preference number: 3 (lower is better)
Translates to: HDVGENVERREV*SLLMPFKKEDD
Trigger: ATCATCTTCCTTCTTAAATGGCATGAGCAATGAGCAAACTTCCCTCCTTTCAACATTCTCACCTACATCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAGATGCAGCAACAATTaGAATGATGAAGCTCCAGTT +
Preference number: 3 (lower is better)
Translates to: INSEMWDLIIFIQRATKPRCSNN*NDEAPV
Trigger: AACTGGAGCTTCATCATTCAAATTGTTGCTGCATCT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAAGAATTACACACTCCTaGAAAGCAAGAACCATGTCT +
Preference number: 3 (lower is better)
Translates to: VESPASCNGRNCVQQIFLRITHS*KARTMS
Trigger: AGACATGGTTCTTGCTTTCAAGGAGTGTGTAATTCT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR-3UTR CAA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCCCAAAGTTGTTTTCCTaGGCAAATGGAATGATGATA +
Preference number: 3 (lower is better)
Translates to: INSEMWDLIIFIQRATKPPKLFS*ANGMMI
Trigger: TATCATCATTCCATTTGCCAAGGAAAACAACTTTGG...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGCCTCATCTCGGAGTGTaGAGGATTTCGCGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKPHLGV*RISRGL
Trigger: AAGCCCCCGCGAAATCCTCCACACTCCGAGATGAGG...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGAAACTTCCGCCATGGCTaGCGCAGCAGCGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGNFRHG*RSSGGL
Trigger: CAGGCCACCGCTGCTGCGGCAGCCATGGCGGAAGTT...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAGGGGACTCCAGGAGTTaGGGACCGCAGACTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQGDSRS*GPQTRP
Trigger: TGGCCTAGTCTGCGGTCCCCAACTCCTGGAGTCCCC...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAGAGAACTGCCACTGTaGCCACCATCTGGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LGGATVPGKSPVYCNTPARELPL*PPSGQV
Trigger: GACTTGGCCAGATGGTGGCCACAGTGGCAGTTCTCT...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGAAGTCAGCCTGGAAGTaGGATAAGGGTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKKSAWK*DKGSRT
Trigger: TGTCCTGGAACCCTTATCCCACTTCCAGGCTGACTT...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTCAGTTCAACTCCTGGTaGGGCTCTAGCCCAACACCT +
Preference number: 4 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCQFNSW*GSSPTP
Trigger: AGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAAGGCAGTTCAACTCCTaGTGGGGCTCTAGCCCAACA +
Preference number: 4 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQRQFNS*WGSSPT
Trigger: TGTTGGGCTAGAGCCCCACCAGGAGTTGAACTGCCT...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGATTCTCAACCTTACCTaGGTCACTATGGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKILNLT*VTMAGV
Trigger: CACTCCTGCCATAGTGACTCAGGTAAGGTTGAGAAT...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGAGAGGGAGTCAATGCTaGGCTGCACTGGTTTACAAA +
Preference number: 4 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKRGSQC*AALVYK
Trigger: TTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCT...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAACTGCACCAGCTGTACTaGCCAAAACCCTCCATGGAT +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQLHQLY*PKPSMD
Trigger: ATCCATGGAGGGTTTTGGTCAGTACAGCTGGTGCAG...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAGACAGAAGGGTTACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQDRRVT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTAACCCTTCTGTC...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTCAGACAGGGCAAAGTTaGTGTACTGCTCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAQTGQS*CTALVS
Trigger: GCTGACCAGAGCAGTACAGCAACTTTGCCCTGTCTG...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGATATGAACTTCCGCCATaGCTGCCGCAGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGYELPP*LPQQRW
Trigger: CCACCGCTGCTGCGGCAGCCATGGCGGAAGTTCATA...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGCAGGCCCAAAGTCCTaGGGTGCCATTTCAAACCAA +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAAGPKS*GAISNQ
Trigger: TTGGTTTGAAATGGCACCCCAGGACTTTGGGCCTGC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp ACTATTCAGTCTCCAGCTTGTTCACCCTGCTCCATCTaGCAATGCTGGTTAGTGGCTGAAGGATGCATCCAG +
Preference number: 4 (lower is better)
Translates to: TIQSPACSPCSI*QCWLVAEGCIQ
Trigger: CTGGATGCATCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGAACAAGCTGGAGACTGAATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAGCTGTACAACTGGCCTaGGCAAACACACTAATCCTC +
Preference number: 4 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQAVQLA*ANTLIL
Trigger: GAGGATTAGTGTGTTTGCTCAGGCCAGTTGTACAGC...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAATCCACTGTTTCTCCGTaGGGATCCTGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQSTVSP*GSCTSC
Trigger: ACAGCTGGTGCAGGATCCTCACGGAGAAACAGTGGA...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAAGGCAATTTAGGCAGTaGCCATTCACAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQRQFRQ*PFTAAL
Trigger: GAGAGCAGCTGTGAATGGGCACTGCCTAAATTGCCT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAAAACTCAACGGGACATaGTGGCAATGTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQKLNGT*WQCVAW
Trigger: CCAGGCTACACATTGCCAGCATGTCCCGTTGAGTTT...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCATGGCAATGTGTAGCCTaGCCAACTAGGGTTATTCCA +
Preference number: 4 (lower is better)
Translates to: LGGATVPGKSPVYCNTPAWQCVA*PTRVIP
Trigger: TGGAATAACCCTAGTTGGCCAGGCTACACATTGCCA...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTAGGGGAAAAGGAACGCTaGCCTTTCCAGGAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVGEKER*PFQEPS
Trigger: AGATGGCTCCTGGAAAGGCCAGCGTTCCTTTTCCCC...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGAAGCAGGGGCAGCATaGGGTCAAGTGCTTTCAATT +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAEAGAA*GQVLSI
Trigger: AATTGAAAGCACTTGACCCCATGCTGCCCCTGCTTC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp ACTGGTGTGTGCATTAGTGCAAAGGTACCAAATCTCTaGCACACTGGCTGTACAACTGGCCTGAGCAAACAC +
Preference number: 4 (lower is better)
Translates to: TGVCISAKVPNL*HTGCTTGLSKH
Trigger: GTGTTTGCTCAGGCCAGTTGTACAGCCAGTGTGCAAGAGATTTGGTACCTTTGCACTAATGCACACACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATTTTGTGCATCTCCTGTaGAATACGCAATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDFVHLL*NTQWPG
Trigger: CCCTGGCCATTGCGTATTTCACAGGAGATGCACAAA...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATAGTCTGGCAACAGAGTaGGACCCTGTCTTTACCAGA +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDSLATE*DPVFTR
Trigger: TCTGGTAAAGACAGGGTCTCACTCTGTTGCCAGACT...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAACCCAAAGTCCTGGGGTaGCATTTCAAACCAACTCAA +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQPKVLG*HFKPTQ
Trigger: TTGAGTTGGTTTGAAATGGCACCCCAGGACTTTGGG...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCGGCAAGCTCAGTAGGTaGGCCAAGGGGCACATGATG +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPGKLSR*AKGHMM
Trigger: CATCATGTGCCCCTTGGCTCACCTACTGAGCTTGCC...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAGGATTCCAAACCCAATaGAATAGACACTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQGFQTQ*NRHWCV
Trigger: CACACACCAGTGTCTATTTCATTGGGTTTGGAATCC...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGTTCTCAAATACTCCTaGAGAGGTGACAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAVLKYS*RGDRSP
Trigger: AGGAGATCTGTCACCTCTTCAGGAGTATTTGAGAAC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGAGCCTACAAATGATTaGCTCATAAAGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAEPTND*LIKSTA
Trigger: GGCTGTGGACTTTATGAGTCAATCATTTGTAGGCTC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTCAAACCAACTCAATGTaGAACTCCACTGTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAQTNSM*NSTVSP
Trigger: CGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTG...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCGGGACTCACAATATATaGCAACTGAGACAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLGTHNI*QLRQAW
Trigger: CCAGGCCTGTCTCAGTTGTCATATATTGTGAGTCCC...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATGAGGAAAGGCTAAACTaGCTCCAGATGCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDEERLN*LQMQQQ
Trigger: TTGTTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTC...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAGCTGCTCTCCCAAAATaGAGCATTGGTTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQAALPK*SIGFER
Trigger: TCTCTCAAAACCAATGCTGCATTTTGGGAGAGCAGC...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAGTGCCCATTCACAGCTaGTCTCCCAAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQVPIHS*SPKMQH
Trigger: ATGCTGCATTTTGGGAGAGCAGCTGTGAATGGGCAC...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAAGGTACCAAATCTCTTaGACACTGGCTGTACAACTG +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQRYQIS*TLAVQL
Trigger: CAGTTGTACAGCCAGTGTGCAAGAGATTTGGTACCT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCATCACTCTTCCTGATTTaGAAAGTATGCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGGATVPGKSPVYCNTPASLFLI*KVCSSL
Trigger: CAGAGAGGAGCATACTTTGCAAATCAGGAAGAGTGA...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAATGCCAAGTCAGAGCTaGCAGCTACAAAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQMPSQS*QLQRLQ
Trigger: TTGGAGCCTTTGTAGCTGCCAGCTCTGACTTGGCAT...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTAGTTGCTGTACTGCTCTaGTCAGCCAGAAGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVVAVLL*SARSFS
Trigger: GCTGAAACTTCTGGCTGACCAGAGCAGTACAGCAAC...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATTCCATCTTGCAATGCTaGTTAGTGGCTGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDSILQC*LVAEGC
Trigger: GCATCCTTCAGCCACTAACCAGCATTGCAAGATGGA...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp AGCTCTTTACTTGTACCTCATCTCACATTGCAGCATTaGGATTCACACTATTGCCGGGTAGGTAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSLLVPHLTLQH*DSHYCRVGRAG
Trigger: ACCTGCCCTACCTACCCGGCAATAGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTACAAGTAAAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACGGCCTACGTATCAGATaGAGCAATCCTCTGGTCACA +
Preference number: 4 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNGLRIR*SNPLVT
Trigger: TGTGACCAGAGGATTGCTTCATCTGATACGTAGGCC...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGGGTAGCCACATTTGCTaGGGGCCTAATATGTACCAG +
Preference number: 4 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLGSHIC*GPNMYQ
Trigger: CTGGTACATATTAGGCCCTCAGCAAATGTGGCTACC...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTTATATCCTCATGCCATaGAGCAGCATCCTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCYILMP*SSILKV
Trigger: TACTTTCAGGATGCTGCTTCATGGCATGAGGATATA...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGACTGTTTGCTCAGCTaGTCTTCAGTGAAAGTGATA +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPADCLLS*SSVKVI
Trigger: TATCACTTTCACTGAAGAGCAGCTGAGCAAACAGTC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGCTCAGATTGTACAAGTaGAAAGGAATGGTTATTTCC +
Preference number: 4 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKLRLYK*KGMVIS
Trigger: GGAAATAACCATTCCTTTGCACTTGTACAATCTGAG...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTAGGCAAACATTACATATaGAGCTCTCAGGGACACCTG +
Preference number: 4 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVGKHYI*SSQGHL
Trigger: CAGGTGTCCCTGAGAGCTGCATATGTAATGTTTGCC...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACTTGGATTCACACTATTaGCGGGTAGGTAGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNLDSHY*RVGRAG
Trigger: ACCTGCCCTACCTACCCGGCAATAGTGTGAATCCAA...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGAGTCAATGCTGAGCTaGACTGGTTTACAAAACACA +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAESMLS*TGLQNT
Trigger: TGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTGGGAAGTTTGCTCATTaGTCATGCCATTTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAGKFAH*SCHLRR
Trigger: CCTTCTTAAATGGCATGAGCAATGAGCAAACTTCCC...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGCATGGGGTCAAGTaGTTTCAATTCAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLQHGVK*FQFREG
Trigger: CCCCTCTCTGAATTGAAAGCACTTGACCCCATGCTG...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACACTGTGGCCACCATCTaGCCAAGTCCAACACATAGT +
Preference number: 4 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNTVATI*PSPTHS
Trigger: ACTATGTGTTGGACTTGGCCAGATGGTGGCCACAGT...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCGATGAAGCAATCCTCTaGTCACACTGCTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLDEAIL*SHCSFP
Trigger: GGGAAAGGAGCAGTGTGACCAGAGGATTGCTTCATC...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTAATGCTGAGCTGCACTaGTTTACAAAACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCNAELH*FTKHSS
Trigger: AGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATT...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAACAACTAAAGTCAGCCTaGAAGTGGGATAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQQLKSA*KWDKGS
Trigger: GGAACCCTTATCCCACTTCCAGGCTGACTTTAGTTG...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCCTCAACGGGACATGCTaGCAATGTGTAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPLNGTC*QCVAWP
Trigger: TGGCCAGGCTACACATTGCCAGCATGTCCCGTTGAG...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAGACCAAAACCCTCCATaGATTCTTGATAAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LGGATVPGKSPVYCNTPADQNPP*ILDKTG
Trigger: TCCTGTTTTATCAAGAATCCATGGAGGGTTTTGGTC...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAACATGCAGGCAGCTCTTaGTTACAAAATCACGGACTC +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQHAGSS*LQNHGL
Trigger: GAGTCCGTGATTTTGTAACCAAGAGCTGCCTGCATG...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATAATGCTTTAGCTCTGTaGGGCGTCCCTAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDNALAL*GVPKIS
Trigger: ACTGATTTTAGGGACGCCCCACAGAGCTAAAGCATT...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp AGTCTAAGGCTCTTAATGAAGCTTGTAACTTGGGAGTaGGTTGCAGGGATAATTCTAGGGACACAGCACCAC +
Preference number: 4 (lower is better)
Translates to: SLRLLMKLVTWE*VAGIILGTQHH
Trigger: GTGGTGCTGTGTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTTACAAGCTTCATTAAGAGCCTTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGACTCTGCTCATCCTATaGAAGTCAGGGAAGCCAACA +
Preference number: 4 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLTLLIL*KSGKPT
Trigger: TGTTGGCTTCCCTGACTTTCATAGGATGAGCAGAGT...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCGCGGCTTTTGAGTGCTaGAACAACTTACTCTTAGTG +
Preference number: 4 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLAAFEC*NNLLLV
Trigger: CACTAAGAGTAAGTTGTTTCAGCACTCAAAAGCCGC...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAACAGAATCATGAACAGTaGATTGTAATAGAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQQNHEQ*IVIEQS
Trigger: GGACTGCTCTATTACAATGCACTGTTCATGATTCTG...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCTCCACAGCCTTTTGTaGATCTCCTGTGAAATACGC +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLLHSLL*ISCEIR
Trigger: GCGTATTTCACAGGAGATGCACAAAAGGCTGTGGAG...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCTGCTCCATCTTGCAATaGTGGTTAGTGGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLCSILQ*WLVAEG
Trigger: TCCTTCAGCCACTAACCAGCATTGCAAGATGGAGCA...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATGTCAACAGAGTCCAGTaGATTCCAAACCCAATGAAA +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDVNRVQ*IPNPMK
Trigger: TTTCATTGGGTTTGGAATCCACTGGACTCTGTTGAC...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTAAAACCAGGAAGTGTTaGCAACATTTACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: KPTQCETPLFLREDPAPAKTRKC*QHLQPE
Trigger: TTCTGGCTGTAAATGTTGCCAACACTTCCTGGTTTT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGAAAAAACCAGACTTTCTaGGAGGTGCCACAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGKNQTF*EVPQYQ
Trigger: CTGGTACTGTGGCACCTCCCAGAAAGTCTGGTTTTT...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp AGTCCACAGCCACATGAGGCAATTAAAACTCAACGGGACATGCTGGCAATGTGTAAACTAGGTGCAAACTaGAGCCTACAAATGATTGAC +
Preference number: 4 (lower is better)
Translates to: SPQPHEAIKTQRDMLAMCKLGAN*SLQMID
Trigger: GTCAATCATTTGTAGGCTCCAGTTTGCACCTAGTTT...ACACATTGCCAGCATGTCCCGTTGAGTTTTAATTGCCTCATGTGGCTGTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCGAAATCTGTAATTGGTaGGCACGCTCTTATTCACCA +
Preference number: 4 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLEICNW*ARSYSP
Trigger: TGGTGAATAAGAGCGTGCTCACCAATTACAGATTTC...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAATACTTTCAAAACACTaGTGTTTCACTGTCGGCATA +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQILSKH*CFTVGI
Trigger: TATGCCGACAGTGAAACATCAGTGTTTTGAAAGTAT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTATTGAAAGTGCTCAAGTaGACTCAGGATCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVLKVLK*TQDLFP
Trigger: AGGAAACAGATCCTGAGTTCACTTGAGCACTTTCAA...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAACTGGAGCCTACAAATaGTTGACTCATAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQTGAYK*LTHKVH
Trigger: GTGGACTTTATGAGTCAATCATTTGTAGGCTCCAGT...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAACATGTTTATGTCACCTaGTTTACATACCTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQHVYVT*FTYLNS
Trigger: GGAATTGAGGTATGTAAATCAGGTGACATAAACATG...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTATCCTTCCAGATCAAATaGCAAGTCAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLSFQIK*QVRAGS
Trigger: GCTGCCAGCTCTGACTTGGCATTTGATCTGGAAGGA...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGACAGAATTATACTGCGTaGAGAGTACTGTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGQNYTA*RVLWRT
Trigger: TGTACGCCACAGTACTCTGCACGCAGTATAATTCTG...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAATGTTTCAACTACCTCTaGAAACATCTCTGTATCCCC +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQCFNYL*KHLCIP
Trigger: GGGGATACAGAGATGTTTGCAGAGGTAGTTGAAACA...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGA +
Preference number: 4 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQNSPVI*FPKYSR
Trigger: TCTACTATATTTTGGGAACCAAATCACGGGACTGTT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAAGTTTGAGACCAGTCTaGCAACAGAGTGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLSLRPV*QQSETL
Trigger: CAGGGTCTCACTCTGTTGCCAGACTGGTCTCAAACT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp ACAAAACACAGCTCTTTACTTGTACCTCATCTCACATaGCAGCATTTGGATTCACACTATTGCCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TKHSSLLVPHLT*QHLDSHYCRVG
Trigger: ACCTACCCGGCAATAGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTACAAGTAAAGAGCTGTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATAAAAGGACATGGGTTTaGTGTATTAGCAAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GCHFKPTQCETPLFLREDKRTWV*CISKSS
Trigger: AGATGACTTGCTAATACATCAAACCCATGTCCTTTT...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAATACCTCATCTCACATTaGAGCATTTGGATTCACACT +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQYLISH*SIWIHT
Trigger: AGTGTGAATCCAAATGCTGCAATGTGAGATGAGGTA...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCACAGACTTGCCTGTCTaGAATTTTCACTTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLTDLPV*NFHLER
Trigger: CCTCTCTAAGTGAAAATTGCAGACAGGCAAGTCTGT...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACGAAAGGAGGGAAGTTTaGTCATTGCTCATGCCATTT +
Preference number: 4 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNERREV*SLLMPF
Trigger: AAATGGCATGAGCAATGAGCAAACTTCCCTCCTTTC...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCTTGGCATACAAGAGCTaGTCACTAAGTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLLAYKS*SLSLCS
Trigger: TGAGCAAAGACTTAGTGAGCAGCTCTTGTATGCCAA...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp ATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTCACCCTGCTCACAGTGAACAGAAACTaGTACCTAAGGATTCTAGAG +
Preference number: 4 (lower is better)
Translates to: IKTQTPKDYSVSSLFTLLTVNRN*YLRILE
Trigger: CTCTAGAATCCTTAGGTAGCAGTTTCTGTTCACTGT...GAGCAGGGTGAACAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAATCTCTTGCACACTaGCTGTACAACTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPKSLAH*LYNWPE
Trigger: CTCAGGCCAGTTGTACAGCCAGTGTGCAAGAGATTT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp AAAAGTGAGTCTAAGGCTCTTAATGAAGCTTGTAACTaGGGAGTTGGTTGCAGGGATAATTCTAGGGACACA +
Preference number: 4 (lower is better)
Translates to: KSESKALNEACN*GVGCRDNSRDT
Trigger: TGTGTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTTACAAGCTTCATTAAGAGCCTTAGACTCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR TCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAGGGTCTCACTTACATTaGACAGGAGACACTAGTCAT +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLGSHLH*TGDTSH
Trigger: ATGACTAGTGTCTCCTGTTCAATGTAAGTGAGACCC...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGAAGGGAAAACAGACTTaGCTGTCTGCAATTTTCACT +
Preference number: 4 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLKGKQT*LSAIFT
Trigger: AGTGAAAATTGCAGACAGGCAAGTCTGTTTTCCCTT...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAACTTGGGAGTTGGTTaGAGGGATAATTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPNLGVG*RDNSRD
Trigger: GTCCCTAGAATTATCCCTGCAACCAACTCCCAAGTT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGACTGATTTGCAAAGTATaGTCCTCTCTGACACCAAAT +
Preference number: 4 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGLICKV*SSLTPN
Trigger: ATTTGGTGTCAGAGAGGAGCATACTTTGCAAATCAG...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTCTGCAATTTTCACTTAGAGAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAATCCTCAAAGTCAATaGATATCTCTGAGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: VCNFHLERESMLSCTGLQNPQSQ*ISLSQV
Trigger: GACTTGACTCAGAGATATCCATTGACTTTGAGGATT...TTGTAAACCAGTGCAGCTCAGCATTGACTCCCTCTCTAAGTGAAAATTGCAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTATGTCTCTGTAGGAACTaGCAGTGTTCTGAGTTGATT +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLCLCRN*QCSELI
Trigger: AATCAACTCAGAACACTGGCAGTTCCTACAGAGACA...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACCAGCATTTAGCACAATaGCTGGCACATATACTTAAA +
Preference number: 4 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNQHLAQ*LAHILK
Trigger: TTTAAGTATATGTGCCAGGCATTGTGCTAAATGCTG...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCATAGACACTGGTGTGTaGATTAGTGCAAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPIDTGV*ISAKVP
Trigger: TGGTACCTTTGCACTAATGCACACACCAGTGTCTAT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTATTTCACATATTCGTCTaGATTTCCAGCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLFHIFV*ISSRGK
Trigger: CTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAA...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR GCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCGATTTAACTCTGTATTaGCTCTTTTTCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPDLTLY*LFFSQE
Trigger: CTCCTGGGAGAAAAAGAGGCAATACAGAGTTAAATC...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCCAGAACTGTAAACATTaGCAAGTTCAGTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPQNCKH*QVQFLC
Trigger: ACAAAGAAACTGAACTTGCCAATGTTTACAGTTCTG...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAGTTTTCCTTGGCAAATaGAATGATGATATGATGAAG +
Preference number: 4 (lower is better)
Translates to: VESPASCNGRNCVQQIFLVFLGK*NDDMMK
Trigger: CTTCATCATATCATCATTCCATTTGCCAAGGAAAAC...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CCA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCATAGAATTTGTCTTTTaGAATACCACAGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: INSEMWDLIIFIQRATKPIEFVF*NTTAHL
Trigger: CAGATGAGCTGTGGTATTCCAAAAGACAAATTCTAT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
3UTR CAA 72 bp CTACAACAAAAATTATTCAAACGTCCCTCCTTCATGTaGCTGACAGAAAGAACAGAATCACTAAAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LQQKLFKRPSFM*LTERTESLKIA
Trigger: AGCTATTTTTAGTGATTCTGTTCTTTCTGTCAGCAACATGAAGGAGGGACGTTTGAATAATTTTTGTTGTAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CCA 90 bp CGGCTCGGGGGCCTGCAGCGGCAGCTCCCAGGGGACTCCAGGAGTTaGGGACCGCAGACTAGGCCAGCTGCGCGCTCGCCGCCTCGACTC +
Preference number: 5 (lower is better)
Translates to: RLGGLQRQLPGDSRS*GPQTRPAARSPPRL
Trigger: GAGTCGAGGCGGCGAGCGCGCAGCTGGCCTAGTCTGCGGTCCCCAACTCCTGGAGTCCCCTGGGAGCTGCCGCTGCAGGCCCCCGAGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS GCA 90 bp TCCTTTAACCCGAGCATGCTGACGTCTATGAACTTCCGCCATGGCTaGCGCAGCAGCGGTGGCCTGGCGGCGGGGCCTAGCGGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: SFNPSMLTSMNFRHG*RSSGGLAAGPSGSG
Trigger: CCCCGAGCCGCTAGGCCCCGCCGCCAGGCCACCGCTGCTGCGGCAGCCATGGCGGAAGTTCATAGACGTCAGCATGCTCGGGTTAAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CAGTTCAACTCCTGGTGGGGCTCTAGCCCAACACCTGTTAAAGACACCCAAAAGTTAGCCTCTGACTGTTaGCTCAGCTGCTCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QFNSWWGSSPTPVKDTQKLASDC*LSCSSV
Trigger: CACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAA...CTTTTGGGTGTCTTTAACAGGTGTTGGGCTAGAGCCCCACCAGGAGTTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAACAGACAGGGCAAAGTaGCTGTACTGCTCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQTDRAK*LYCSGQ
Trigger: CTGACCAGAGCAGTACAGCAACTTTGCCCTGTCTGT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAATCAGGACAGACCGTATaGCCCAAGCCTCTAGCATTT +
Preference number: 5 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQSGQTV*PKPLAF
Trigger: AAATGCTAGAGGCTTGGGCAATACGGTCTGTCCTGA...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTTCAAGGTCAGGAAACTaGACTACTCTGAGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: KPTQCETPLFLREDPAPASRSGN*TTLSAF
Trigger: AAAGGCGCTCAGAGTAGTCAAGTTTCCTGACCTTGA...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCACCCTTAATGTCCAGCTaGTTATTAGCCTCTGACTGT +
Preference number: 5 (lower is better)
Translates to: LGGATVPGKSPVYCNTPAPLMSS*LLASDC
Trigger: ACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGG...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCATCCCAAAATGCAGCATaGGTTTTGAGAGAAGTTGGC +
Preference number: 5 (lower is better)
Translates to: LGGATVPGKSPVYCNTPASQNAA*VLREVG
Trigger: GCCAACTTCTCTCAAAACCAATGCTGCATTTTGGGA...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAACCAATCCATTTAGCCTaGACTAGAAGCAGATTGGCC +
Preference number: 5 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQPIHLA*TRSRLA
Trigger: GGCCAATCTGCTTCTAGTCAAGGCTAAATGGATTGG...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCATGCAGGCAGCTCTaGGTTACAAAATCACGGACT +
Preference number: 5 (lower is better)
Translates to: GCHFKPTQCETPLFLREDPCRQL*VTKSRT
Trigger: AGTCCGTGATTTTGTAACCAAGAGCTGCCTGCATGG...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CTGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAAAACTCCACAGCCTTTaGTGCATCTCCTGTGAAATA +
Preference number: 5 (lower is better)
Translates to: LGGATVPGKSPVYCNTPAKLHSL*CISCEI
Trigger: TATTTCACAGGAGATGCACAAAAGGCTGTGGAGTTT...TGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTAATGCAGCATTGGTTTaGAGAGAAGTTGGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: KPTQCETPLFLREDPAPANAALV*REVGKL
Trigger: GAGCTTGCCAACTTCTCTCAAAACCAATGCTGCATT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATCCTGCACCAGCTAAGGTACCAAATCTCTaGCACACTGGCTGTACAACT +
Preference number: 5 (lower is better)
Translates to: KPTQCETPLFLREDPAPAKVPNL*HTGCTT
Trigger: AGTTGTACAGCCAGTGTGCAAGAGATTTGGTACCTT...AGCTGGTGCAGGATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AAGACACCTCAGTGTCTCTGTAGGAACTGCCAGTGTTCTGAGTTGATTAAAAACTCACCCTGCTCCATCTaGCAATGCTGGTTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KTPQCLCRNCQCSELIKNSPCSI*QCWLVA
Trigger: AGCCACTAACCAGCATTGCAAGATGGAGCAGGGTGA...GTTTTTAATCAACTCAGAACACTGGCAGTTCCTACAGAGACACTGAGGTGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GGGTGCCATTTCAAACCAACTCAATGTGAAACTCCACTGTTTCTCCGTGAGGATTTACGTATGCACCATTaGCTGCTGTTAGGACATCGT +
Preference number: 5 (lower is better)
Translates to: GCHFKPTQCETPLFLREDLRMHH*LLLGHR
Trigger: ACGATGTCCTAACAGCAGCAAATGGTGCATACGTAA...ATCCTCACGGAGAAACAGTGGAGTTTCACATTGAGTTGGTTTGAAATGGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCCAGATGCAGCAAAGCTTAGCAAAATACTaGGCATACAAGAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YSSAFPAEERLNCLQMQQSLAKY*AYKSCS
Trigger: TGAGCAGCTCTTGTATGCCAAGTATTTTGCTAAGCT...TTGCTGCATCTGGAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTACAAGGGAAAACAGACTaGCCTGTCTGCAATTTTCAC +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVQGKTD*PVCNFH
Trigger: GTGAAAATTGCAGACAGGCAAGTCTGTTTTCCCTTG...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp ACGCCTGCAATAATCAAAACGCAAACTCCAAAAGACTATTCAGTCTCCAGCTTGTTGACTAGAAGCAGATaGGCCAAAGAGGGTCTCACT +
Preference number: 5 (lower is better)
Translates to: TPAIIKTQTPKDYSVSSLLTRSR*AKEGLT
Trigger: AGTGAGACCCTCTTTGGCCAATCTGCTTCTAGTCAA...CAAGCTGGAGACTGAATAGTCTTTTGGAGTTTGCGTTTTGATTATTGCAGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAAAGAATTACACACTCCTaGAAAGCAAGAACCATGTCT +
Preference number: 5 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQRITHS*KARTMS
Trigger: AGACATGGTTCTTGCTTTCAAGGAGTGTGTAATTCT...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS TCA 90 bp TCACACTGCTCCTTTCCCCTTAATGTCCAGCTTGTTATTAGCCTCTaGCTGTTTGCTCAGCTGCTCTTCAGTGAAAGTGATATAGGAATA +
Preference number: 5 (lower is better)
Translates to: SHCSFPLNVQLVISL*LFAQLLFSESDIGI
Trigger: TATTCCTATATCACTTTCACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TGGGAGGTGCCACAGTACCAGGTAAATCACCAGTATATTGTAACACGCCTGCAACAAGAAAAAGTCTTCTaGAGTAAAACTCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: WEVPQYQVNHQYIVTRLQQEKVF*SKTPSA
Trigger: TGCTGAAGGAGTTTTACTCAAGAAGACTTTTTCTTG...TTGCAGGCGTGTTACAATATACTGGTGATTTACCTGGTACTGTGGCACCTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp CTCCCAAGGCACAGAAGCCTGTCACGTGCATTTAGTGAAGCTGTAACTACACAATTTATAGTGCCAAAGTaGTTTTCCTTGGCAAATGGA +
Preference number: 5 (lower is better)
Translates to: LPRHRSLSRAFSEAVTTQFIVPK*FSLANG
Trigger: TCCATTTGCCAAGGAAAACAACTTTGGCACTATAAA...TTGTGTAGTTACAGCTTCACTAAATGCACGTGACAGGCTTCTGTGCCTTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTACTTGTAACTTGGGAGTaGGTTGCAGGGATAATTCTA +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVLVTWE*VAGIIL
Trigger: TAGAATTATCCCTGCAACCAACTCCCAAGTTACAAG...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCGTCACTCTTCCTGATTaGCAAAGTATGCTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLVTLPD*QSMLLS
Trigger: AGAGAGGAGCATACTTTGCAAATCAGGAAGAGTGAC...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTAGGATTTAACTCTGTATaGCCTCTTTTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVGFNSV*PLFLPG
Trigger: TCCTGGGAGAAAAAGAGGCAATACAGAGTTAAATCC...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CCA 90 bp AACATTGGCAAGTTCAGTTTCTTTGTGCTGAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGAGGTAGTGGAAACGTCTTTCGAGGT +
Preference number: 5 (lower is better)
Translates to: NIGKFSFFVLNSPVI*FPKYSRGSGNVFRG
Trigger: ACCTCGAAAGACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCACGGGACTGTTCAGCACAAAGAAACTGAACTTGCCAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTATGCCAGTGTTCTGAGTaGATTAAAAACTTAGGCCTA +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVCQCSE*IKNLGL
Trigger: TAGGCCTAAGTTTTTAATCAACTCAGAACACTGGCA...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTAAGATGCAGCAACAATTaGAATGATGAAGCTCCAGTT +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVRCSNN*NDEAPV
Trigger: AACTGGAGCTTCATCATTCAAATTGTTGCTGCATCT...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTATATTCAGTCTCCAGCTaGTTCACCCTGCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: VESPASCNGRNCVQQIFLYSVSS*FTLLHL
Trigger: AAGATGGAGCAGGGTGAACAAGCTGGAGACTGAATA...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGACAATCAATCCTCAGATaGTACAAGTGCAAAGGAATG +
Preference number: 5 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGQSILR*YKCKGM
Trigger: CATTCCTTTGCACTTGTACAATCTGAGGATTGATTG...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAAATGAAGCTTGTAACTaGGGAGTTGGTTGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: VESPASCNGRNCVQQIFLNEACN*GVGCRD
Trigger: ATCCCTGCAACCAACTCCCAAGTTACAAGCTTCATT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GAGGGAGTCAATGCTGAGCTGCACTGGTTTACAAAACACAGCTCTTTACTTGTACATAGAATTTGTCTTTaGGAATACCACAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: EGVNAELHWFTKHSSLLVHRICL*EYHSSS
Trigger: AGATGAGCTGTGGTATTCCAAAAGACAAATTCTATG...TACAAGTAAAGAGCTGTGTTTTGTAAACCAGTGCAGCTCAGCATTGACTCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp TCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAAAGGACCAAAGTTGTTTTCCTaGGCAAATGGAATGATGATA +
Preference number: 5 (lower is better)
Translates to: SEMWDLIIFIQRATKPKGPKLFS*ANGMMI
Trigger: TATCATCATTCCATTTGCCAAGGAAAACAACTTTGG...TCCTTTGGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp AGAAATTTCACATATTCGTCTGCATTTCCAGCAGAGGAAAGGCTAAACTGCCTCGAGAAAAACCAACCATaGACAATACAAAGACGTCTA +
Preference number: 5 (lower is better)
Translates to: RNFTYSSAFPAEERLNCLEKNQP*TIQRRL
Trigger: TAGACGTCTTTGTATTGTCAATGGTTGGTTTTTCTC...GAGGCAGTTTAGCCTTTCCTCTGCTGGAAATGCAGACGAATATGTGAAATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp ATAAATTCAGAAATGTGGGACCTCATCATATTCATCCAAAGAGCAACCAAACCCAGGGAAGTTTGCTCATaGCTCATGCCATTTAAGAAG +
Preference number: 5 (lower is better)
Translates to: INSEMWDLIIFIQRATKPREVCS*LMPFKK
Trigger: CTTCTTAAATGGCATGAGCAATGAGCAAACTTCCCT...GGGTTTGGTTGCTCTTTGGATGAATATGATGAGGTCCCACATTTCTGAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS-3UTR CAA 90 bp GTAGAATCACCTGCATCATGTAATGGCCGTAATTGTGTCCAGCAGATATTTTTAATGATGAAGCTCCAGTaGGCAAACATTACATATGCA +
Preference number: 5 (lower is better)
Translates to: VESPASCNGRNCVQQIFLMMKLQ*ANITYA
Trigger: TGCATATGTAATGTTTGCCAACTGGAGCTTCATCAT...TAAAAATATCTGCTGGACACAATTACGGCCATTACATGATGCAGGTGATTCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CCA 72 bp GGCCTGCAGCGGCAGCTCCCAGGGGACTCCAGGAGTTaGGGACCGCAGACTAGGCCAGCTGCGCGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: GLQRQLPGDSRS*GPQTRPAARSP
Trigger: CGGCGAGCGCGCAGCTGGCCTAGTCTGCGGTCCCCAACTCCTGGAGTCCCCTGGGAGCTGCCGCTGCAGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS GCA 72 bp CCGAGCATGCTGACGTCTATGAACTTCCGCCATGGCTaGCGCAGCAGCGGTGGCCTGGCGGCGGGGCCTAGC +
Preference number: 6 (lower is better)
Translates to: PSMLTSMNFRHG*RSSGGLAAGPS
Trigger: GCTAGGCCCCGCCGCCAGGCCACCGCTGCTGCGGCAGCCATGGCGGAAGTTCATAGACGTCAGCATGCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CAA 90 bp AGTGGAAACGTCTTTCGAGGTACATTTCTGTCAAGGTCAGGAAACTaGACTACTCTGAGCGCCTTTCCCACCCAGAGAACTGCCACTGTG +
Preference number: 6 (lower is better)
Translates to: SGNVFRGTFLSRSGN*TTLSAFPTQRTATV
Trigger: CACAGTGGCAGTTCTCTGGGTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGACCTTGACAGAAATGTACCTCGAAAGACGTTTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CAA 72 bp GTCTTTCGAGGTACATTTCTGTCAAGGTCAGGAAACTaGACTACTCTGAGCGCCTTTCCCACCCAGAGAACT +
Preference number: 6 (lower is better)
Translates to: VFRGTFLSRSGN*TTLSAFPTQRT
Trigger: AGTTCTCTGGGTGGGAAAGGCGCTCAGAGTAGTCAAGTTTCCTGACCTTGACAGAAATGTACCTCGAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CAA 72 bp TCTGGTCACACTGCTCCTTTCCCCTTAATGTCCAGCTaGTTATTAGCCTCTGACTGTTTGCTCAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SGHTAPFPLMSS*LLASDCLLSCS
Trigger: AGAGCAGCTGAGCAAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTGTGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CAA 90 bp AAGCAATCCTCTGGTCACACTGCTCCTTTCCCCTTAATGTCCAGCTaGTTATTAGCCTCTGACTGTTTGCTCAGCTGCTCTTCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: KQSSGHTAPFPLMSS*LLASDCLLSCSSVK
Trigger: TTTCACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTGTGACCAGAGGATTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS GCA 72 bp ATACGCAATGGCCAGGGTGGGCAGAATCATGAACAGTaGATTGTAATAGAGCAGTCCATATTTTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: IRNGQGGQNHEQ*IVIEQSIFSQL
Trigger: GAGCTGGGAAAATATGGACTGCTCTATTACAATGCACTGTTCATGATTCTGCCCACCCTGGCCATTGCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS GCA 72 bp GCCTACGTATCAGATGAAGCAATCCTCTGGTCACACTaGTCCTTTCCCCTTAATGTCCAGCTTGTTATTAGC +
Preference number: 6 (lower is better)
Translates to: AYVSDEAILWSH*SFPLNVQLVIS
Trigger: GCTAATAACAAGCTGGACATTAAGGGGAAAGGAGCAGTGTGACCAGAGGATTGCTTCATCTGATACGTAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS TCA 72 bp TCCTTTCCCCTTAATGTCCAGCTTGTTATTAGCCTCTaGCTGTTTGCTCAGCTGCTCTTCAGTGAAAGTGAT +
Preference number: 6 (lower is better)
Translates to: SFPLNVQLVISL*LFAQLLFSESD
Trigger: ATCACTTTCACTGAAGAGCAGCTGAGCAAACAGTCAGAGGCTAATAACAAGCTGGACATTAAGGGGAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6
CDS CCA 72 bp AAGTTCAGTTTCTTTGTGCTGAACAGTCCCGTGATTTaGTTCCCAAAATATAGTAGAGGTAGTGGAAACGTC +
Preference number: 6 (lower is better)
Translates to: KFSFFVLNSPVI*FPKYSRGSGNV
Trigger: GACGTTTCCACTACCTCTACTATATTTTGGGAACCAAATCACGGGACTGTTCAGCACAAAGAAACTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000235345.6