RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35C1 (Homo sapiens)

Ensembl gene IDs: ENSG00000181830

Ensembl transcript IDs: ENST00000314134.4, ENST00000442528.2, ENST00000526817.1, ENST00000530471.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGCCTaGCCACCGCAGACGGAAGGCTTCCCAACCCTCTCCAGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: FLQRKAGLWAQGEAA*PPQTEGFPTLSRWL
Trigger: CAGCCACCTGGAGAGGGTTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR TCA 90 bp AGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTaGGGCTGCCTGCCCACCGCAGACGGAAGGCTTCCCAACCCTCTC +
Preference number: 1 (lower is better)
Translates to: RPHFPPKEGRSVGPG*GCLPTADGRLPNPL
Trigger: GAGAGGGTTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR TCA 90 bp GAAGGGCCAGGGACTGCAAGCCACCCTGAGCGCAGGAGGGTGTGGTaGAGGGTGGTATGGCCCCGAAATTTGTGTGTGTCCCCCACTCCC +
Preference number: 1 (lower is better)
Translates to: EGPGTASHPERRRVW*RVVWPRNLCVSPTP
Trigger: GGGAGTGGGGGACACACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGTGGCTTGCAGTCCCTGGCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 90 bp GCTGTAACACCTCCCTTGCAGAGATCTAGGGGCGCCAGACACAGCTaGGGTGGAAGGCTCCTAGTCTGGACCCTTGCTCCATCAGCCCCA +
Preference number: 1 (lower is better)
Translates to: AVTPPLQRSRGARHS*GGRLLVWTLAPSAP
Trigger: TGGGGCTGATGGAGCAAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCTCTGCAAGGGAGGTGTTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 90 bp AAGAGAGAAGCAGCTCCTTGGCTCTGCTTTCAGAAGGCTGTTACCTaGGCCAGGTGCTGGGAGACCAGAGGGACAGGTGCCACTCAGGGC +
Preference number: 1 (lower is better)
Translates to: KREAAPWLCFQKAVT*ARCWETRGTGATQG
Trigger: GCCCTGAGTGGCACCTGTCCCTCTGGTCTCCCAGCACCTGGCCCAGGTAACAGCCTTCTGAAAGCAGAGCCAAGGAGCTGCTTCTCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 90 bp GTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGCTTTaGCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCCCTGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: VVGPSPLSTVKPLWL*HCCPFKVVACPCPQ
Trigger: CTGAGGACAGGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 90 bp GTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTaGCTTTGCCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCCCTGT +
Preference number: 1 (lower is better)
Translates to: VAVVGPSPLSTVKPL*LCHCCPFKVVACPC
Trigger: ACAGGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 90 bp GTTTGTAAGCCACCCGGCCTACGGCATTTTGATATAGGAGCTCGCTaGACTAACAGTGGGGCCAAGCAGGCTCTGTCAGCCACAACCTCA +
Preference number: 1 (lower is better)
Translates to: VCKPPGLRHFDIGAR*TNSGAKQALSATTS
Trigger: TGAGGTTGTGGCTGACAGAGCCTGCTTGGCCCCACTGTTAGTCCAGCGAGCTCCTATATCAAAATGCCGTAGGCCGGGTGGCTTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 90 bp GGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGCTTTGCCATTaGTGTCCCTTCAAGGTTGTTGCCTGTCCCTGTCCTCAGAGTGAT +
Preference number: 1 (lower is better)
Translates to: GPSPLSTVKPLWLCH*CPFKVVACPCPQSD
Trigger: ATCACTCTGAGGACAGGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 90 bp GACAGGCCCTGGAGGCAGAAGGAAGGGGTTCAACTCTCACTAGGGTaGTCCCTCGGGAAGGACAAAAACTCAGAAATACGAGAGGATAGA +
Preference number: 1 (lower is better)
Translates to: DRPWRQKEGVQLSLG*SLGKDKNSEIREDR
Trigger: TCTATCCTCTCGTATTTCTGAGTTTTTGTCCTTCCCGAGGGAGCACCCTAGTGAGAGTTGAACCCCTTCCTTCTGCCTCCAGGGCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR TCA 90 bp GGTTCCCTTGTGTTCAAAAGCTGGACATACAGGGTGTATAGATGGTaGGCACTTTCTCACAATCCACCCCATTCCCAGGCCACTGCCCAG +
Preference number: 1 (lower is better)
Translates to: GSLVFKSWTYRVYRW*ALSHNPPHSQATAQ
Trigger: CTGGGCAGTGGCCTGGGAATGGGGTGGATTGTGAGAAAGTGCTCACCATCTATACACCCTGTATGTCCAGCTTTTGAACACAAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR TCA 90 bp TATAAAAGAGGCAGGAAGGAGCTTGCTTGTTTGTGCTTCTACCATTaGGGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCC +
Preference number: 1 (lower is better)
Translates to: YKRGRKELACLCFYH*GYSEKAPSMDRETA
Trigger: GGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCCTTCCTGCCTCTTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp CGCTGGACTAACAGTGGGGCCAAGCAGGCTCTGTCAGCCACAACCTCAGGGAAGCAGGGTGAGGCTGCCTaGCCACCGCAGACGGAAGGC +
Preference number: 2 (lower is better)
Translates to: RWTNSGAKQALSATTSGKQGEAA*PPQTEG
Trigger: GCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTG...CTTCCCTGAGGTTGTGGCTGACAGAGCCTGCTTGGCCCCACTGTTAGTCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp AAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGACTGCAAGCCACCCTGAGGACCAGAGGGACAGGTaGCACTCAGGGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: KGHTKCPPEGPGTASHPEDQRDR*HSGPEE
Trigger: CTCCTCTGGCCCTGAGTGGCACCTGTCCCTCTGGTC...CTCAGGGTGGCTTGCAGTCCCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp CGCTGGACTAACAGTGGGGCCAAGCAGGCTCTGTCAGCCACAACCTCAGGGAAGGTCCTCAGAGTGATGTaGAGGCAGACAGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: RWTNSGAKQALSATTSGKVLRVM*RQTGPG
Trigger: TCCAGGGCCTGTCTGCCTCCACATCACTCTGAGGAC...CTTCCCTGAGGTTGTGGCTGACAGAGCCTGCTTGGCCCCACTGTTAGTCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CAA 90 bp TACCATCACAAGGCAAGCGGCTCAGAACCAGCTGTAACACCTCCCTaGCAGAGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: YHHKASGSEPAVTPP*QRSRGARHSWGGRL
Trigger: GAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCTCTGCAAGGGAGGTGTTACAGCTGGTTCTGAGCCGCTTGCCTTGTGATGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp GGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCCCTCAGCGGAGTCCAGCCCCTGGGGATCTaGTGGTGTCAGAGGGAACTC +
Preference number: 2 (lower is better)
Translates to: GYSEKAPSMDRETALSGVQPLGI*WCQREL
Trigger: GAGTTCCCTCTGACACCAGCAGATCCCCAGGGGCTG...GACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CAA 90 bp CAGGTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTaGTGGCTTTGCCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: QVAVVGPSPLSTVKP*WLCHCCPFKVVACP
Trigger: GGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGTCCATCAGCCCCACCTaGGGAGGAAGGCTTCTGGGG +
Preference number: 2 (lower is better)
Translates to: SEITPRERTYQMPTRRARSISPT*GGRLLG
Trigger: CCCCAGAAGCCTTCCTCCCCAGGTGGGGCTGATGGA...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCGCCTTCACTACTGTaGTGGCCCCGCCTGTGTACG +
Preference number: 2 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPPSLL*WPRLCT
Trigger: CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR-3UTR CCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCTTCACTACTGTGCTaGCCCCGCCTGTGTACGGGC +
Preference number: 2 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPSLLC*PRLCTG
Trigger: GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTTGTGATGTTAGGGACTaGGGGAGGATGTTAATGACC +
Preference number: 2 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLCDVRD*GRMLMT
Trigger: GGTCATTAACATCCTCCCCCAGTCCCTAACATCACA...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CAA 90 bp TGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGCTTaGCCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCCCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: CGRAISPEYSEAFVA*PLLSLQGCCLSLSS
Trigger: TGAGGACAGGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCACCACAGCACGCTTCTaGGGTCCAGGAGACCGCCTT +
Preference number: 2 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPTTARF*GPGDRL
Trigger: AAGGCGGTCTCCTGGACCCCAGAAGCGTGCTGTGGT...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp CGCTGGACTAACAGTGGGGCCAAGCAGGCTCTGTCAGCCACAACCTCAGGGAAGCCTCTAAGAGAAGCATaGTTCCCTTGTGTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: RWTNSGAKQALSATTSGKPLREA*FPCVQK
Trigger: CTTTTGAACACAAGGGAACCATGCTTCTCTTAGAGG...CTTCCCTGAGGTTGTGGCTGACAGAGCCTGCTTGGCCCCACTGTTAGTCCAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCCAGACACAGCTGGGGTaGAAGGCTCCTAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPQTQLG*KAPSLD
Trigger: GTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTG...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCCGCCTTCACTACTGTaGTGGCCCCGCCTGTGTACG +
Preference number: 2 (lower is better)
Translates to: KHWFLLNHRILIGSISSTPPSLL*WPRLCT
Trigger: CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR-3UTR GCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTCAACTCTCACTAGGGTaGTCCCTCGGGAAGGACAAA +
Preference number: 2 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAQLSLG*SLGKDK
Trigger: TTTGTCCTTCCCGAGGGAGCACCCTAGTGAGAGTTG...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTGATATAGGAGCTCGCTaGACTAACAGTGGGGCCAAG +
Preference number: 2 (lower is better)
Translates to: IGILTPKVTVLGGGAFGADIGAR*TNSGAK
Trigger: CTTGGCCCCACTGTTAGTCCAGCGAGCTCCTATATC...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTAGAGAAGCAGCTCCTTaGCTCTGCTTTCAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAREAAP*LCFQKA
Trigger: AGCCTTCTGAAAGCAGAGCCAAGGAGCTGCTTCTCT...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR GCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGAAGCCTTTGTGGCTTTaGCATTGCTGTCCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: SEITPRERTYQMPTRRARKPLWL*HCCPFK
Trigger: CTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTT...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTCCTTCACTACTGTGCTaGCCCCGCCTGTGTACGGGC +
Preference number: 2 (lower is better)
Translates to: TCKHWFLLNHRILIGSISPSLLC*PRLCTG
Trigger: GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGG...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR-3UTR CCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTACCACAGCACGCTTCTaGGGTCCAGGAGACCGCCTT +
Preference number: 2 (lower is better)
Translates to: TCKHWFLLNHRILIGSISTTARF*GPGDRL
Trigger: AAGGCGGTCTCCTGGACCCCAGAAGCGTGCTGTGGT...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR CAA 90 bp CTCATGAACAGGGTTGGAGTCCTTATAAAAGAGGCAGGAAGGAGCTaGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCAC +
Preference number: 2 (lower is better)
Translates to: LMNRVGVLIKEAGRS*LVCASTIEDTARRH
Trigger: GTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCCTTCCTGCCTCTTTTATAAGGACTCCAACCCTGTTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 72 bp AGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGCCTaGCCACCGCAGACGGAAGGCTTCCCAACCCTCTCC +
Preference number: 3 (lower is better)
Translates to: RKAGLWAQGEAA*PPQTEGFPTLS
Trigger: GGAGAGGGTTGGGAAGCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 72 bp CCTCCCTTGCAGAGATCTAGGGGCGCCAGACACAGCTaGGGTGGAAGGCTCCTAGTCTGGACCCTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: PPLQRSRGARHS*GGRLLVWTLAP
Trigger: TGGAGCAAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCTCTGCAAGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 72 bp CAAGCCACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTaGTATGGCCCCGAAATTTGTGTGTGTCCCCCACTC +
Preference number: 3 (lower is better)
Translates to: QATLSAGGCGEG*YGPEICVCPPL
Trigger: GAGTGGGGGACACACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGTGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 72 bp CCACCCGGCCTACGGCATTTTGATATAGGAGCTCGCTaGACTAACAGTGGGGCCAAGCAGGCTCTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: PPGLRHFDIGAR*TNSGAKQALSA
Trigger: GGCTGACAGAGCCTGCTTGGCCCCACTGTTAGTCCAGCGAGCTCCTATATCAAAATGCCGTAGGCCGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CAA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCGCTGTAACACCTCCCTaGCAGAGATCTAGGGGCGCC +
Preference number: 3 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPAVTPP*QRSRGA
Trigger: GGCGCCCCTAGATCTCTGCAAGGGAGGTGTTACAGC...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 72 bp CCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGCTTTaGCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: PSPLSTVKPLWL*HCCPFKVVACP
Trigger: GGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 72 bp GTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTaGCTTTGCCATTGCTGTCCCTTCAAGGTTGTTGCC +
Preference number: 3 (lower is better)
Translates to: VGPSPLSTVKPL*LCHCCPFKVVA
Trigger: GGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CAA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCGCTGTCCCTTCAAGGTaGTTGCCTGTCCCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPAVPSR*LPVPVL
Trigger: GAGGACAGGGACAGGCAACAACCTTGAAGGGACAGC...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CAA 90 bp AAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGACTGCAAGCCACCCTGAGAGTACAGTGAAGCCTTaGTGGCTTTGCCATTGCTGT +
Preference number: 3 (lower is better)
Translates to: KGHTKCPPEGPGTASHPESTVKP*WLCHCC
Trigger: ACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACT...CTCAGGGTGGCTTGCAGTCCCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CCA 72 bp TCTACCATTGAGGATACAGCGAGAAGGCACCATCTATaGATCGGGAAACAGCCCTCAGCGGAGTCCGAATCT +
Preference number: 3 (lower is better)
Translates to: STIEDTARRHHL*IGKQPSAESES
Trigger: AGATTCGGACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCCTCAATGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CAA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGAGGCAGGAAGGAGCTaGCTTGTTTGTGCTTCTACC +
Preference number: 3 (lower is better)
Translates to: SEITPRERTYQMPTRRAREAGRS*LVCAST
Trigger: GGTAGAAGCACAAACAAGCAAGCTCCTTCCTGCCTC...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR GCA 72 bp TGGAGGCAGAAGGAAGGGGTTCAACTCTCACTAGGGTaGTCCCTCGGGAAGGACAAAAACTCAGAAATACGA +
Preference number: 3 (lower is better)
Translates to: WRQKEGVQLSLG*SLGKDKNSEIR
Trigger: TCGTATTTCTGAGTTTTTGTCCTTCCCGAGGGAGCACCCTAGTGAGAGTTGAACCCCTTCCTTCTGCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR-3UTR CAA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTCAGGAAGGAGCTTGCTaGTTTGTGCTTCTACCATTG +
Preference number: 3 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAQEGAC*FVLLPL
Trigger: CAATGGTAGAAGCACAAACAAGCAAGCTCCTTCCTG...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR TCA 72 bp GTGTTCAAAAGCTGGACATACAGGGTGTATAGATGGTaGGCACTTTCTCACAATCCACCCCATTCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: VFKSWTYRVYRW*ALSHNPPHSQA
Trigger: GGCCTGGGAATGGGGTGGATTGTGAGAAAGTGCTCACCATCTATACACCCTGTATGTCCAGCTTTTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGAGGCGTACAGGGAGCTaGCGGAGGCCGGGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTRRTGS*RRPGAA
Trigger: AGCCGCGCCCGGCCTCCGGCAGCTCCCTGTACGCCT...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGCCCGCGACCCCGTGCTaGATCTGCAGCGCCGCACCC +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTPATPC*ICSAAP
Trigger: GGGTGCGGCGCTGCAGATGCAGCACGGGGTCGCGGG...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGACCCCGTGCTGCATCTaGAGCGCCGCACCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTTPCCI*SAAPWA
Trigger: GGCCCAGGGTGCGGCGCTGCAGATGCAGCACGGGGT...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR TCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTCTCTGCAGAGGGGTCTaGGGCCCCGGTCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEALCRGV*GPGQRH
Trigger: ATGGCGCTGACCGGGGCCTCAGACCCCTCTGCAGAG...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGCCGGGCCATCCAGGGTaGCTGTGGTGCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTPGHPG*LWCSHP
Trigger: GGGGTGTGAGCACCACAGGCACCCTGGATGGCCCGG...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTCGTCATGGGCGGCTGTaGGAGGGAGGGGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLRHGRL*EGGAGR
Trigger: CCTGCCCGCCCCTCCCTCCCACAGCCGCCCATGACG...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTCCAGCCACGACAGGGTaGCTTCTGCCCCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEAPATTG*LLPPPG
Trigger: ACCAGGAGGGGGCAGAAGGCACCCTGTCGTGGCTGG...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGGCTCTGGGCACAGGCCTTaGCCGTGCCCGACACATTGT +
Preference number: 4 (lower is better)
Translates to: LGSRRPPSLLCWPRLCTGSGHRP*PCPTHC
Trigger: ACAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGA...GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGGCACCACAGCACGCTTCTaGGGTCCAGGAGACCGCCTT +
Preference number: 4 (lower is better)
Translates to: LGSRRPPSLLCWPRLCTGTTARF*GPGDRL
Trigger: AAGGCGGTCTCCTGGACCCCAGAAGCGTGCTGTGGT...GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp CTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGGCGGCACTGGTAGAAGGTaGCGAAGATGGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGSRRPPSLLCWPRLCTGGTGRR*RRWGCP
Trigger: TGGACACCCCCATCTTCGTCACCTTCTACCAGTGCC...GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp CTCCAGGTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGGCGCCCACGTCTCGCTaGCTTCCCGGGCTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LQVAVVGPSPLSTVKPLWAPTSR*LPGLCR
Trigger: GCGACAGAGCCCGGGAAGGCAGCGAGACGTGGGCGC...CCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCACCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTGCACGCCGAAGACGGTaGCCAGCCACGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLARRRR*PATTGC
Trigger: GCACCCTGTCGTGGCTGGGCACCGTCTTCGGCGTGC...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGGCGTGCTCACACCCCCATaGCGCTCTTCTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LGSRRPPSLLCWPRLCTGVLTPP*RSSRCL
Trigger: AAGACAGCGAGAAGAGCGCCATGGGGGTGTGAGCAC...GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTCATCCAGGGTGCCTGTaGTGCTCACACCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEAHPGCL*CSHPHG
Trigger: GCCATGGGGGTGTGAGCACCACAGGCACCCTGGATG...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTAGGAAGGCCGGTCTGTaGGCCCAGGGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLRKAGL*AQGEAA
Trigger: GGCAGCCTCACCCTGGGCCCACAGACCGGCCTTCCT...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGGCGGAAGGCTCCTAGTCTaGACCCTTGCTCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LGSRRPPSLLCWPRLCTGGRLLV*TLAPSA
Trigger: GGCTGATGGAGCAAGGGTCCAGACTAGGAGCCTTCC...GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCATGGGCCCCGGGGGTaGCGGCGGAGAGGCGGTGAT +
Preference number: 4 (lower is better)
Translates to: LIGSISSTQSTPQHASGVHGPRG*RRRGGD
Trigger: ATCACCGCCTCTCCGCCGGCACCCCCGGGGCCCATG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGCGGGATCGACTTCCTaGTTTCCGCCCCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETAGSTS*FPPRAR
Trigger: CCGGGCCCGGGGCGGAAAGCAGGAAGTCGATCCCGC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCGCCCCGCGACCCCGTaGTGCATCTGCAGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LIGSISSTQSTPQHASGVRPATP*CICSAA
Trigger: TGCGGCGCTGCAGATGCAGCACGGGGTCGCGGGGCG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTGGACGCGTGGCAGAGTaGGAAGAGGTGCCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLGRVAE*EEVPRG
Trigger: CCCTCTCGGCACCTCTTCCCACTCTGCCACGCGTCC...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTGGTCCAGGCGCAAGCTaGGGAAGTCCACGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLGPGAS*GSPRHQ
Trigger: CTGGTGCCGTGGACTTCCCCAGCTTGCGCCTGGACC...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGCCTTCTGCCCCCTCCTaGTCCACACCAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTPSAPS*STPSQK
Trigger: CTTCTGGCTTGGTGTGGACCAGGAGGGGGCAGAAGG...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGATCATCCCCCAGAAGTaGGCACTGCCCAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTIIPQK*ALPSWA
Trigger: TGCCCAGCTGGGCAGTGCCCACTTCTGGGGGATGAT...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGCGCTGTCTTTGGGGCTaGGCTCCTCCGGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTRCLWG*APPESS
Trigger: AGAAGACTCCGGAGGAGCCCAGCCCCAAAGACAGCG...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTCCCCTGGGGATCTGCTaGTGTCAGAGGGAACTCGCT +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEAPLGIC*CQRELA
Trigger: AGCGAGTTCCCTCTGACACCAGCAGATCCCCAGGGG...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGGCACGTCCCGGGACTTaGCTGTATCCCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQEARPGT*LYPWPA
Trigger: GGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGC...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR TCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCAGGCGGCCAGAGCGCTaGGGCCTTTGCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETRRPER*GLCTAA
Trigger: CGCTGCTGTGCAAAGGCCTCAGCGCTCTGGCCGCCT...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGAGGAGGTGGTCTGCTTaGGCAGCAGGTAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTRRWSA*AAGRRA
Trigger: TGCTCTCCTACCTGCTGCTCAAGCAGACCACCTCCT...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTTACGCGGGGCGAAGGTaGAGGAAAAGGACGCGTGGC +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLYAGRR*RKRTRG
Trigger: GCCACGCGTCCTTTTCCTGCACCTTCGCCCCGCGTA...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGCACGCCGAAGACGGTaGCCAGCCACGACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETARRRR*PATTGC
Trigger: GCACCCTGTCGTGGCTGGGCACCGTCTTCGGCGTGC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCTCAGGCGCCAGATGCTaGCGTCCACCGCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETSGARC*RPPPGA
Trigger: TGCTCCCGGCGGTGGACGGCAGCATCTGGCGCCTGA...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTCTGCCCAGCAGCCCCTaGGGATCTGCTGGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLLPSSP*GSAGVR
Trigger: TCTGACACCAGCAGATCCCCAGGGGCTGCTGGGCAG...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTCAGACACAGCTGGGGTaGAAGGCTCCTAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEAQTQLG*KAPSLD
Trigger: GTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTG...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCTCTGCAGAGGGGTCTaGGGCCCCGGTCAGCGCCAT +
Preference number: 4 (lower is better)
Translates to: LIGSISSTQSTPQHASGVLCRGV*GPGQRH
Trigger: ATGGCGCTGACCGGGGCCTCAGACCCCTCTGCAGAG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCCGGCGGAGAGGCGGTaGTCCGGACGGTCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGPAERR*SGRSWE
Trigger: CTCCCACGACCGTCCGGATCACCGCCTCTCCGCCGG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGGACCAGAGGGACAGGTaGCACTCAGGGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVDQRDR*HSGPEE
Trigger: CTCCTCTGGCCCTGAGTGGCACCTGTCCCTCTGGTC...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGCCATGTGCAGGATCCTaGACCGCTTCAGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQEPCAGS*TASEGP
Trigger: GGGCCCCTCTGAAGCGGTCCAGGATCCTGCACATGG...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGGTCCAGGCGCAAGCTaGGGAAGTCCACGGCACCAG +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETGPGAS*GSPRHQ
Trigger: CTGGTGCCGTGGACTTCCCCAGCTTGCGCCTGGACC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCTGGGCACTGCCCAGCTaGGCAAAGTCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETWALPS*AKSRRA
Trigger: GGCCCTGCGTGACTTTGCCCAGCTGGGCAGTGCCCA...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTTCTTCTCGCTGTCTTTaGGGCTGGGCTCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLSSRCL*GWAPPE
Trigger: CTCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGA...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCACTTGGCTGTATCCCTaGCCCGCCGCGCTACCGGCT +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETTWLYP*PAALPA
Trigger: AGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGT...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGGCTACTCCTGTCCCTaGTACCCCCGCCCGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGGYSCP*YPRPPG
Trigger: CCCGGGCGGGCGGGGGTACCAGGGACAGGAGTAGCC...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp GGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCCCTCAGCGGAGTCCCGGTCAGCGCCATGTaGAGGATCCTGGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: GYSEKAPSMDRETALSGVPVSAM*RILDRF
Trigger: GAAGCGGTCCAGGATCCTGCACATGGCGCTGACCGG...GACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTCAGCGCGATCTGCAATaGCCGCAGCAGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLQRDLQ*PQQKGL
Trigger: AAGCCCTTTCTGCTGCGGGCATTGCAGATCGCGCTG...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGCACAGGCCTTGGCCGTaGCCGACACATTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQEHRPWP*PTHCGS
Trigger: TGACCCACAATGTGTCGGGCACGGCCAAGGCCTGTG...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCCCGCCTTCACTACTGTaGTGGCCCCGCCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETPPSLL*WPRLCT
Trigger: CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGG...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTGCCGAGAGGGCGTCATaGGCGGCTGTGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HRILIGSISSTQSTPQHAAERAS*AAVGGR
Trigger: CCTCCCTCCCACAGCCGCCCATGACGCCCTCTCGGC...AGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGTCTGGGCACAGGCCTTaGCCGTGCCCGACACATTGT +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVSGHRP*PCPTHC
Trigger: ACAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGA...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGCGCTGTCTTTGGGGCTaGGCTCCTCCGGAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVRCLWG*APPESS
Trigger: AGAAGACTCCGGAGGAGCCCAGCCCCAAAGACAGCG...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp GGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCCCTCAGCGGAGTCCCTTCACTACTGTGCTaGCCCCGCCTGTGTACGGGC +
Preference number: 4 (lower is better)
Translates to: GYSEKAPSMDRETALSGVPSLLC*PRLCTG
Trigger: GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGG...GACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGCAGAAGGCTGTTACCTaGGCCAGGTGCTGGGAGACC +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVQKAVT*ARCWET
Trigger: GGTCTCCCAGCACCTGGCCCAGGTAACAGCCTTCTG...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTGATATAGGAGCTCGCTaGACTAACAGTGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEADIGAR*TNSGAK
Trigger: CTTGGCCCCACTGTTAGTCCAGCGAGCTCCTATATC...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTCCAGGTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGGCCTTTGGAGCTGATTaGGTCATGGGGGCGGAACCC +
Preference number: 4 (lower is better)
Translates to: LQVAVVGPSPLSTVKPLWAFGAD*VMGAEP
Trigger: GGGTTCCGCCCCCATGACCCAATCAGCTCCAAAGGC...CCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCACCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CAA 72 bp AAGGCAAGCGGCTCAGAACCAGCTGTAACACCTCCCTaGCAGAGATCTAGGGGCGCCAGACACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KASGSEPAVTPP*QRSRGARHSWG
Trigger: ACCCCAGCTGTGTCTGGCGCCCCTAGATCTCTGCAAGGGAGGTGTTACAGCTGGTTCTGAGCCGCTTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCACCAGCGCGATCTaGAATGCCCGCAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQETTSAI*NARSRK
Trigger: CTTTCTGCTGCGGGCATTGCAGATCGCGCTGGTGGT...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp GGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCCCTCAGCGGAGTCCACAGGCCTTGGCCGTaGCCGACACATTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GYSEKAPSMDRETALSGVHRPWP*PTHCGS
Trigger: TGACCCACAATGTGTCGGGCACGGCCAAGGCCTGTG...GACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCAGGGTGAGGCTGCCTaGCCACCGCAGACGGAAGGC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGQGEAA*PPQTEG
Trigger: GCCTTCCGTCTGCGGTGGGCAGGCAGCCTCACCCTG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGTTACCTGGGCCAGGTaGTGGGAGACCAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETVTWAR*WETRGT
Trigger: TGTCCCTCTGGTCTCCCAGCACCTGGCCCAGGTAAC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGCTGTCACGTAGCCGATaGCAAAGCCAAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQELSRSR*QSQTGR
Trigger: GCGGCCTGTTTGGCTTTGCCATCGGCTACGTGACAG...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTCCGCGGCCAGAACTCTaGTTCCCTGGAGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAPRPEL*FPGVQG
Trigger: GCCCTGGACTCCAGGGAATCAGAGTTCTGGCCGCGG...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGGAAGACGGTGGTGAGTaGGCGGCCCACATTGTAGAA +
Preference number: 4 (lower is better)
Translates to: GSISSTQSTPQHASGVQEEDGGE*AAHIVE
Trigger: TTCTACAATGTGGGCCGCTCACTCACCACCGTCTTC...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTAAGTCACGCAGGGCCTaGAGCTCCCCGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAKSRRA*SSPSSR
Trigger: CCTGCTGCTCGGGGAGCTTCAGGCCCTGCGTGACTT...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGAAGTCACGCAGGGCCTaGAGCTCCCCGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGKSRRA*SSPSSR
Trigger: CCTGCTGCTCGGGGAGCTTCAGGCCCTGCGTGACTT...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGACTGCAAGCCACCCTaGGCGCAGGAGGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SEITPRERTYQMPTRRARDCKPP*AQEGVV
Trigger: CACCACACCCTCCTGCGCTCAGGGTGGCTTGCAGTC...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGCGACAGGGTGCCTTCTaGCCCCTCCTGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: SEITPRERTYQMPTRRARRQGAF*PLLVHT
Trigger: GGTGTGGACCAGGAGGGGGCAGAAGGCACCCTGTCG...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCTCAGGCGCCAGATGCTaGCGTCCACCGCCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GACLFVLLPLRIQREGTISGARC*RPPPGA
Trigger: TGCTCCCGGCGGTGGACGGCAGCATCTGGCGCCTGA...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCCCAGAAGTGGGCACTaGCCAGCTGGGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LIGSISSTQSTPQHASGVPRSGH*PAGQSH
Trigger: GTGACTTTGCCCAGCTGGGCAGTGCCCACTTCTGGG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGCCAGCACCATCATGTTaGTCGTCCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVPAPSC*SSTRGS
Trigger: GCTTCCTCTGGTGGACGAGCAACATGATGGTGCTGG...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCGGGCCATCCAGGGTaGCTGTGGTGCTCACACCCC +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPGHPG*LWCSHP
Trigger: GGGGTGTGAGCACCACAGGCACCCTGGATGGCCCGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGTGGGCACTGCCCAGCTaGGCAAAGTCACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGWALPS*AKSRRA
Trigger: GGCCCTGCGTGACTTTGCCCAGCTGGGCAGTGCCCA...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTACGGCCAGCACTGTCTaGGCACAGGCCTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IGILTPKVTVLGGGAFGATASTV*AQALAV
Trigger: CACGGCCAAGGCCTGTGCCCAGACAGTGCTGGCCGT...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTACCCCGAGGGGGCTCTaGGACAAGACACAGGGCAAG +
Preference number: 4 (lower is better)
Translates to: IGILTPKVTVLGGGAFGATPRGL*DKTQGK
Trigger: CTTGCCCTGTGTCTTGTCTCAGAGCCCCCTCGGGGT...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGAGGCGGCCAGAGCGCTaGGGCCTTTGCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQRRPER*GLCTAA
Trigger: CGCTGCTGTGCAAAGGCCTCAGCGCTCTGGCCGCCT...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCTCATCTCCCAGCCCCTaGCCCAGGTGTAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GACLFVLLPLRIQREGTISSPSP*PRCRRR
Trigger: CCTCCGCCTACACCTGGGTCAGGGGCTGGGAGATGA...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACTCATCTCCCAGCCCCTaGCCCAGGTGTAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHSSPSP*PRCRRR
Trigger: CCTCCGCCTACACCTGGGTCAGGGGCTGGGAGATGA...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCAGCCACGACAGGGTaGCTTCTGCCCCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPATTG*LLPPPG
Trigger: ACCAGGAGGGGGCAGAAGGCACCCTGTCGTGGCTGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCAGGGTGCCTGTGGTaGTCACACCCCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPGCLW*SHPHGA
Trigger: AGCGCCATGGGGGTGTGAGCACCACAGGCACCCTGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp CACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTCCGCCTTCACTACTGTaGTGGCCCCGCCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: HRILIGSISSTQSTPQHAPPSLL*WPRLCT
Trigger: CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGG...AGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCATTCCCAGGCCACTaGCCAGCAGCCCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPFPGH*PAAPGD
Trigger: ATCCCCAGGGGCTGCTGGGCAGTGGCCTGGGAATGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCCATGTGCAGGATCCTaGACCGCTTCAGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGPCAGS*TASEGP
Trigger: GGGCCCCTCTGAAGCGGTCCAGGATCCTGCACATGG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCCTTTGCACAGCAGCGTaGTCACCAGGCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETLCTAA*SPGTGR
Trigger: TCTACCAGTGCCTGGTGACCACGCTGCTGTGCAAAG...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCCTTCACTACTGTGCTaGCCCCGCCTGTGTACGGGC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGPSLLC*PRLCTG
Trigger: GCCCGTACACAGGCGGGGCCAGCACAGTAGTGAAGG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AGATCTAGGGGCGCCAGACACAGCTGGGGTGGAAGGCTCCTAGTCTGGACCCTTACAGTGAAGCCTTTGTaGCTTTGCCATTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RSRGARHSWGGRLLVWTLTVKPL*LCHCCP
Trigger: GGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGT...AAGGGTCCAGACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCCCCTAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGCGACAGGGTGCCTTCTaGCCCCTCCTGGTCCACACC +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQRQGAF*PLLVHT
Trigger: GGTGTGGACCAGGAGGGGGCAGAAGGCACCCTGTCG...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGCCAGGGTGCCTGTGGTaGTCACACCCCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQPGCLW*SHPHGA
Trigger: AGCGCCATGGGGGTGTGAGCACCACAGGCACCCTGG...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGCAGCTCCTTGGCTCTaGTTTCAGAAGGCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SISSTQSTPQHASGVQETAAPWL*FQKAVT
Trigger: GGTAACAGCCTTCTGAAAGCAGAGCCAAGGAGCTGC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTTCCCCATTGTCCTCATaGATTGAGAAGTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEASPLSS*IEKFCF
Trigger: AAAGCAGAACTTCTCAATCCATGAGGACAATGGGGA...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCCTTCTGCCCCCTCCTaGTCCACACCAAGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGPSAPS*STPSQK
Trigger: CTTCTGGCTTGGTGTGGACCAGGAGGGGGCAGAAGG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CTCCAGGTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGACCAGAGGAAGCTCTTaGTCTCCTCGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: LQVAVVGPSPLSTVKPLWTRGSS*SPRSRA
Trigger: TGCTCTACTACGAGGAGACCAAGAGCTTCCTCTGGT...CCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCACCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCGGCGCCAGACACAGCTaGGGTGGAAGGCTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPGARHS*GGRLLV
Trigger: GACTAGGAGCCTTCCACCCCAGCTGTGTCTGGCGCC...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CTCCAGGTGGCTGTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGGCATTAGAACCCATCTaGGATTGTGAGGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LQVAVVGPSPLSTVKPLWALEPI*DCEGTG
Trigger: TCCAGTCCCCTCACAATCCCAGATGGGTTCTAATGC...CCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCACAGCCACCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGAGTTCTGCTTTGGGGTaGGCCCAGTTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGSSALG*AQLCCS
Trigger: GGAGCAGCACAACTGGGCTCACCCCAAAGCAGAACT...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCCAGCCCCTGGGGATCTaGTGGTGTCAGAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: GACLFVLLPLRIQREGTIQPLGI*WCQREL
Trigger: GAGTTCCCTCTGACACCAGCAGATCCCCAGGGGCTG...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGGCCGCGCTACCGGCTTaGACTTCCAGAAGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQAALPA*TSRSAC
Trigger: GCACGCACTTCTGGAAGTGCAAGCCGGTAGCGCGGC...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR GCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTCGGGCCCGGGCACCTTaGCAGCCTCGCCGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISRARAP*QPRRPV
Trigger: AACAGGCCGGCGAGGCTGGCAAGGTGCCCGGGCCCG...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCTGTCACGTAGCCGATaGCAAAGCCAAACAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGLSRSR*QSQTGR
Trigger: GCGGCCTGTTTGGCTTTGCCATCGGCTACGTGACAG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCTCAGAGTGATGTaGAGGCAGACAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGVLRVM*RQTGPG
Trigger: TCCAGGGCCTGTCTGCCTCCACATCACTCTGAGGAC...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCATCAGCCCCACCTaGGGAGGAAGGCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQSISPT*GGRLLG
Trigger: CCCCAGAAGCCTTCCTCCCCAGGTGGGGCTGATGGA...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACTTCAGTTACCGCAGCTaGCACGTCCCGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHFSYRS*HVPGLG
Trigger: GCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAA...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
3UTR CAA 72 bp AGCCTTTGTGGCTTTGCCATTGCTGTCCCTTCAAGGTaGTTGCCTGTCCCTGTCCTCAGAGTGATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLCGFAIAVPSR*LPVPVLRVMWR
Trigger: CCTCCACATCACTCTGAGGACAGGGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
3UTR CAA 72 bp GCCATCTCCCCTGAGTACAGTGAAGCCTTTGTGGCTTaGCCATTGCTGTCCCTTCAAGGTTGTTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AISPEYSEAFVA*PLLSLQGCCLS
Trigger: GGACAGGCAACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACAGGAGGTGGTCTGCTTaGGCAGCAGGTAGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHRRWSA*AAGRRA
Trigger: TGCTCTCCTACCTGCTGCTCAAGCAGACCACCTCCT...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCGCAGGAGGGTGTGGTaGAGGGTGGTATGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTRRRVW*RVVWPR
Trigger: TCGGGGCCATACCACCCTTCACCACACCCTCCTGCG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGACTGCAAGCCACCCTGAGTGGATTGAGAAGTTCTaGTTTGGGGTGAGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: KGHTKCPPEGPGTASHPEWIEKF*FGVSPV
Trigger: AACTGGGCTCACCCCAAAGCAGAACTTCTCAATCCA...CTCAGGGTGGCTTGCAGTCCCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCAGCGCGATCTGCAATaGCCGCAGCAGAAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHQRDLQ*PQQKGL
Trigger: AAGCCCTTTCTGCTGCGGGCATTGCAGATCGCGCTG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGCCCAGAAGTGGGCACTaGCCAGCTGGGCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQPRSGH*PAGQSH
Trigger: GTGACTTTGCCCAGCTGGGCAGTGCCCACTTCTGGG...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGCTTTGCACAGCAGCGTaGTCACCAGGCACTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGLCTAA*SPGTGR
Trigger: TCTACCAGTGCCTGGTGACCACGCTGCTGTGCAAAG...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGTGCTCACACCCCCATaGCGCTCTTCTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHVLTPP*RSSRCL
Trigger: AAGACAGCGAGAAGAGCGCCATGGGGGTGTGAGCAC...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTGCCGCGAAGGCGACCTaGCGCTCACCTCCTCCGGTG +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISAAKAT*RSPPPV
Trigger: CACCGGAGGAGGTGAGCGCCAGGTCGCCTTCGCGGC...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
3UTR CAA 72 bp GTGGTAGGGCCATCTCCCCTGAGTACAGTGAAGCCTTaGTGGCTTTGCCATTGCTGTCCCTTCAAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VVGPSPLSTVKP*WLCHCCPFKVV
Trigger: AACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACTCAGGGGAGATGGCCCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGAGTGGGAAGAGGTaGCGAGAGGGCGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTQSGKR*REGVMG
Trigger: GCCCATGACGCCCTCTCGGCACCTCTTCCCACTCTG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCCGGTCAGCGCCATGTaGAGGATCCTGGACCGCTTC +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTPVSAM*RILDRF
Trigger: GAAGCGGTCCAGGATCCTGCACATGGCGCTGACCGG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACCCAGCACCATCATGTTaGTCGTCCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHPAPSC*SSTRGS
Trigger: GCTTCCTCTGGTGGACGAGCAACATGATGGTGCTGG...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGCAACTCTCACTAGGGTaGTCCCTCGGGAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: SEITPRERTYQMPTRRARQLSLG*SLGKDK
Trigger: TTTGTCCTTCCCGAGGGAGCACCCTAGTGAGAGTTG...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AATTTGTGTGTGTCCCCCACTCCCCCTGCAAATTCACATTGGAATTCTCACCCCCTCCATTGTCACATGTaGGCTGGCCTAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NLCVSPTPPANSHWNSHPLHCHM*AGLKAS
Trigger: GGAGGCCTTTAGGCCAGCCCACATGTGACAATGGAG...GGGGTGAGAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGACACACACAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGGTGCCCGACACATTGTaGGTCAGCGGACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQVPDTL*VSGLVN
Trigger: GTTCACCAGTCCGCTGACCCACAATGTGTCGGGCAC...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR TCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCTGGAGTCCAGGGCAGTaGGCTCACTTGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTWSPGQ*AHLCSP
Trigger: CGGAGAGCACAAGTGAGCTCACTGCCCTGGACTCCA...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp GTTCAACTCTCACTAGGGTGCTCCCTCGGGAAGGACAAAAACTCAGAAATACGAGAAGACGGTGGTGAGTaGGCGGCCCACATTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VQLSLGCSLGKDKNSEIREDGGE*AAHIVE
Trigger: TTCTACAATGTGGGCCGCTCACTCACCACCGTCTTC...TCGTATTTCTGAGTTTTTGTCCTTCCCGAGGGAGCACCCTAGTGAGAGTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAAGTCAGGCGCCAGATaGTGCCGTCCACCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISKSGAR*CRPPPG
Trigger: TCCCGGCGGTGGACGGCAGCATCTGGCGCCTGACTT...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCCCCACTCCCCCTaGAAATTCACATTGGAATTC +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGVPHSP*KFTLEF
Trigger: GAATTCCAATGTGAATTTGCAGGGGGAGTGGGGGAC...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTACGGCCAGCACTGTCTaGGCACAGGCCTTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISTASTV*AQALAV
Trigger: CACGGCCAAGGCCTGTGCCCAGACAGTGCTGGCCGT...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCTCTTCTCGCTGTCTTTaGGGCTGGGCTCCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTSSRCL*GWAPPE
Trigger: CTCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGA...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ACCCTGAGCGCAGGAGGGTGTGGTGAAGGGTGGTATGGCCCCGAAATTTGTGTGCTTGTGTTCAAAAGCTaGACATACAGGGTGTATAGA +
Preference number: 4 (lower is better)
Translates to: TLSAGGCGEGWYGPEICVLVFKS*TYRVYR
Trigger: TCTATACACCCTGTATGTCCAGCTTTTGAACACAAG...CACACAAATTTCGGGGCCATACCACCCTTCACCACACCCTCCTGCGCTCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCGGGTGTGGTGAAGGGTaGTATGGCCCCGAAATTTGT +
Preference number: 4 (lower is better)
Translates to: GACLFVLLPLRIQREGTIGCGEG*YGPEIC
Trigger: ACAAATTTCGGGGCCATACCACCCTTCACCACACCC...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGAGAGGATGCAGGCGTTaGCGTTGTTGTAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGRGCRR*RCCRKS
Trigger: TGACTTTCTACAACAACGTCAACGCCTGCATCCTCT...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTTGTCACATGTGGGCTaGCCTAAAGGCCTCCCCATT +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQLSHVG*PKGLPI
Trigger: AATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAA...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCGTGCCCGACACATTGTaGGTCAGCGGACTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTVPDTL*VSGLVN
Trigger: GTTCACCAGTCCGCTGACCCACAATGTGTCGGGCAC...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTCATCCAGGGTGCCTGTaGTGCTCACACCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISHPGCL*CSHPHG
Trigger: GCCATGGGGGTGTGAGCACCACAGGCACCCTGGATG...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
3UTR CAA 72 bp AGGCAGGAAGGAGCTTGCTTGTTTGTGCTTCTACCATaGAGGATACAGCGAGAAGGCACCATCTATGGATCG +
Preference number: 4 (lower is better)
Translates to: RQEGACLFVLLP*RIQREGTIYGS
Trigger: CGATCCATAGATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCCTTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTGACAGAGAAGACCTGTaGGGGGAGAAGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISDREDL*GEKRLG
Trigger: CCCCAGCCTCTTCTCCCCTCACAGGTCTTCTCTGTC...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACAGAGGATGCAGGCGTTaGCGTTGTTGTAGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NHRILIGSISSTQSTPQHRGCRR*RCCRKS
Trigger: TGACTTTCTACAACAACGTCAACGCCTGCATCCTCT...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp AAAAACTCAGAAATACGAGAGGATAGAGAAGGGTTTGGCAACTTTCTGGTATTAAAGTCAGGCGCCAGATaGTGCCGTCCACCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: KNSEIREDREGFGNFLVLKSGAR*CRPPPG
Trigger: TCCCGGCGGTGGACGGCAGCATCTGGCGCCTGACTT...TAATACCAGAAAGTTGCCAAACCCTTCTCTATCCTCTCGTATTTCTGAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGTTGTGGCTTTGCCATTaGTGTCCCTTCAAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ILIGSISSTQSTPQHASGLWLCH*CPFKVV
Trigger: AACAACCTTGAAGGGACAGCAATGGCAAAGCCACAA...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTGGCACTGGTAGAAGGTaGCGAAGATGGGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISGTGRR*RRWGCP
Trigger: TGGACACCCCCATCTTCGTCACCTTCTACCAGTGCC...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTACCACCAGCGCGATCTaGAATGCCCGCAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: TCKHWFLLNHRILIGSISTTSAI*NARSRK
Trigger: CTTTCTGCTGCGGGCATTGCAGATCGCGCTGGTGGT...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR GCA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGAAGCCTTTGTGGCTTTaGCATTGCTGTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: HWFLLNHRILIGSISSTQKPLWL*HCCPFK
Trigger: CTTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTT...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp GCTGGACATACAGGGTGTATAGATGGTGAGCACTTTCTCACAATCCACCCCATTATTGTCCTCATGGATTaGGAAGTTCTGCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AGHTGCIDGEHFLTIHPIIVLMD*EVLLWG
Trigger: ACCCCAAAGCAGAACTTCTCAATCCATGAGGACAAT...AATGGGGTGGATTGTGAGAAAGTGCTCACCATCTATACACCCTGTATGTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCACCAGAGGAAGCTCTTaGTCTCCTCGTAGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTTRGSS*SPRSRA
Trigger: TGCTCTACTACGAGGAGACCAAGAGCTTCCTCTGGT...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGATTACTTGTAAACACTaGTTCCTTCTCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: SEITPRERTYQMPTRRARITCKH*FLLNHR
Trigger: ACGGTGGTTGAGAAGGAACCAGTGTTTACAAGTAAT...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp CACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTATTACTTGTAAACACTaGTTCCTTCTCAACCACCGT +
Preference number: 4 (lower is better)
Translates to: HRILIGSISSTQSTPQHAITCKH*FLLNHR
Trigger: ACGGTGGTTGAGAAGGAACCAGTGTTTACAAGTAAT...AGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCAGAGAAGCAGCTCCTTaGCTCTGCTTTCAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTREAAP*LCFQKA
Trigger: AGCCTTCTGAAAGCAGAGCCAAGGAGCTGCTTCTCT...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR TCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCAGGGTGTATAGATGGTaGGCACTTTCTCACAATCCA +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTRVYRW*ALSHNP
Trigger: TGGATTGTGAGAAAGTGCTCACCATCTATACACCCT...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR GCA 90 bp AAAAACTCAGAAATACGAGAGGATAGAGAAGGGTTTGGCAACTTTCTGGTATTATCAGGCCCCAGCAGCTaGATTAGAACCCATCTGGGA +
Preference number: 4 (lower is better)
Translates to: KNSEIREDREGFGNFLVLSGPSS*IRTHLG
Trigger: TCCCAGATGGGTTCTAATGCAGCTGCTGGGGCCTGA...TAATACCAGAAAGTTGCCAAACCCTTCTCTATCCTCTCGTATTTCTGAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCCTCTAAGAGAAGCATaGTTCCCTTGTGTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KHWFLLNHRILIGSISSTPLREA*FPCVQK
Trigger: CTTTTGAACACAAGGGAACCATGCTTCTCTTAGAGG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CCA 90 bp AAAAACTCAGAAATACGAGAGGATAGAGAAGGGTTTGGCAACTTTCTGGTATTATGTGATGTTAGGGACTaGGGGAGGATGTTAATGACC +
Preference number: 4 (lower is better)
Translates to: KNSEIREDREGFGNFLVLCDVRD*GRMLMT
Trigger: GGTCATTAACATCCTCCCCCAGTCCCTAACATCACA...TAATACCAGAAAGTTGCCAAACCCTTCTCTATCCTCTCGTATTTCTGAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS GCA 90 bp GCGCTCACCTCCTCCGGTGCACTGGGCGCCCGCCCCGCGACCCCGTaGTGCATCTGCAGCGCCGCACCCTGGGCCGCGCCCGCGGGATCG +
Preference number: 5 (lower is better)
Translates to: ALTSSGALGARPATP*CICSAAPWAAPAGS
Trigger: CGATCCCGCGGGCGCGGCCCAGGGTGCGGCGCTGCAGATGCAGCACGGGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGAGGTGAGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 90 bp GGGCCCTCCTCCGGTGCACTGGGCGCCCGCCCCGCGACCCCGTGCTaGATCTGCAGCGCCGCACCCTGGGCCGCGCCCGCGGGATCGACT +
Preference number: 5 (lower is better)
Translates to: GPSSGALGARPATPC*ICSAAPWAAPAGST
Trigger: AGTCGATCCCGCGGGCGCGGCCCAGGGTGCGGCGCTGCAGATGCAGCACGGGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGAGGGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526817.1
CDS CCA 90 bp CAGCTCCCGCGTCCCTGCCTGTGTCCCCGGGCCGCGAAGGCGACCTaGCGCTCACCTCCTCCGGTGCACTGGGCGCCCGCCCCGCGACCC +
Preference number: 5 (lower is better)
Translates to: QLPRPCLCPRAAKAT*RSPPPVHWAPAPRP
Trigger: GGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGAGGTGAGCGCCAGGTCGCCTTCGCGGCCCGGGGACACAGGCAGGGACGCGGGAGCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 90 bp TCCTCCGGTGCACTGGGCGCCCGCCCCGCGACCCCGTGCTGCATCTaGAGCGCCGCACCCTGGGCCGCGCCCGCGGGATCGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSGALGARPATPCCI*SAAPWAAPAGSTSC
Trigger: GCAGGAAGTCGATCCCGCGGGCGCGGCCCAGGGTGCGGCGCTGCAGATGCAGCACGGGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS GCA 90 bp CTCACCTCCTCCGGTGCACTGGGCGCCCGCCCCGCGACCCCGTGCTaGATCTGCAGCGCCGCACCCTGGGCCGCGCCCGCGGGATCGACT +
Preference number: 5 (lower is better)
Translates to: LTSSGALGARPATPC*ICSAAPWAAPAGST
Trigger: AGTCGATCCCGCGGGCGCGGCCCAGGGTGCGGCGCTGCAGATGCAGCACGGGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGAGGTGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 90 bp TGTGGGAGGGAGGGGCGGGCAGGGGGAGGGAGGCGTACAGGGAGCTaGCGGAGGCCGGGCGCGGCTGGAGGGAGGGCTGCGGAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: CGREGRAGGGRRTGS*RRPGAAGGRAAEGS
Trigger: TGACCCTTCCGCAGCCCTCCCTCCAGCCGCGCCCGGCCTCCGGCAGCTCCCTGTACGCCTCCCTCCCCCTGCCCGCCCCTCCCTCCCACA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS GCA 90 bp ACCTTGCCAGCCTCGCCGGCCTGTTCGCGGCATGGGCCCCGGGGGTaGCGGCGGAGAGGCGGTGATCCGGACGGTCGTGGGAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: TLPASPACSRHGPRG*RRRGGDPDGRGRRP
Trigger: GGGCCTCCTCCCACGACCGTCCGGATCACCGCCTCTCCGCCGGCACCCCCGGGGCCCATGCCGCGAACAGGCCGGCGAGGCTGGCAAGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS TCA 90 bp GGCCTGTTCGCGGCATGGGCCCCGGGGGTGCCGGCGGAGAGGCGGTaGTCCGGACGGTCGTGGGAGGAGGCCCTCTCCTCTTTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: GLFAAWAPGVPAERR*SGRSWEEALSSFQG
Trigger: GCCTTGGAAAGAGGAGAGGGCCTCCTCCCACGACCGTCCGGATCACCGCCTCTCCGCCGGCACCCCCGGGGCCCATGCCGCGAACAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS GCA 90 bp ATACTGTTTCCCCGGCCGGTCCAGCCGCATCAGCTCCCGCGTCCCTaGCTGTGTCCCCGGGCCGCGAAGGCGACCTGGCGCTCACCTCCT +
Preference number: 5 (lower is better)
Translates to: ILFPRPVQPHQLPRP*LCPRAAKATWRSPP
Trigger: AGGAGGTGAGCGCCAGGTCGCCTTCGCGGCCCGGGGACACAGGCAGGGACGCGGGAGCTGATGCGGCTGGACCGGCCGGGGAAACAGTAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS CCA 90 bp CTTCAGTTACCGCAGCTGGCACGTCCCGGGACTTGGCTGTATCCCTaGCCCGCCGCGCTACCGGCTTGCACTTCCAGAAGTGCGTGCGGG +
Preference number: 5 (lower is better)
Translates to: LQLPQLARPGTWLYP*PAALPACTSRSACG
Trigger: CCCGCACGCACTTCTGGAAGTGCAAGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 90 bp AGCCAGCACGCCGAAGACGGTGCCCAGCCACGACAGGGTGCCTTCTaGCCCCTCCTGGTCCACACCAAGCCAGAAGCCCCCGATGATGAT +
Preference number: 5 (lower is better)
Translates to: SQHAEDGAQPRQGAF*PLLVHTKPEAPDDD
Trigger: ATCATCATCGGGGGCTTCTGGCTTGGTGTGGACCAGGAGGGGGCAGAAGGCACCCTGTCGTGGCTGGGCACCGTCTTCGGCGTGCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS TCA 90 bp CTTTGGGGCTGGGCTCCTCCGGAGTCTTCTTCATCTCCCAGCCCCTaGCCCAGGTGTAGGCGGAGGAGCCGCCCAGCACCATCATGTTGC +
Preference number: 5 (lower is better)
Translates to: LWGWAPPESSSSPSP*PRCRRRSRPAPSCC
Trigger: GCAACATGATGGTGCTGGGCGGCTCCTCCGCCTACACCTGGGTCAGGGGCTGGGAGATGAAGAAGACTCCGGAGGAGCCCAGCCCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS TCA 90 bp GGTCACCCCGCGGCCAGAACTCTGATTCCCTGGAGTCCAGGGCAGTaGGCTCACTTGTGCTCTCCGCAAGGAAGCCGCAGCCCTCCATTG +
Preference number: 5 (lower is better)
Translates to: GHPAARTLIPWSPGQ*AHLCSPQGSRSPPL
Trigger: CAATGGAGGGCTGCGGCTTCCTTGCGGAGAGCACAAGTGAGCTCACTGCCCTGGACTCCAGGGAATCAGAGTTCTGGCCGCGGGGTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS GCA 90 bp GATGGAGGTGACCCAGTAGAGGGAGACCACCAGCGCGATCTGCAATaGCCGCAGCAGAAAGGGCTTCTCCCCGTTGGCCTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: DGGDPVEGDHQRDLQ*PQQKGLLPVGLCLC
Trigger: GCAGAGGCAGAGGCCAACGGGGAGAAGCCCTTTCTGCTGCGGGCATTGCAGATCGCGCTGGTGGTCTCCCTCTACTGGGTCACCTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314134.4
ENST00000442528.2
ENST00000526817.1
ENST00000530471.1
CDS-3UTR CAA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGCGCCGCGCTACCGGCTaGCACTTCCAGAAGTGCGTG +
Preference number: 5 (lower is better)
Translates to: GSISSTQSTPQHASGVQERRATG*HFQKCV
Trigger: CACGCACTTCTGGAAGTGCAAGCCGGTAGCGCGGCG...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS CCA 90 bp AGCCGCCCAGCACCATCATGTTGCTCGTCCACCAGAGGAAGCTCTTaGTCTCCTCGTAGTAGAGCACGGCCAGCACTGTCTGGGCACAGG +
Preference number: 5 (lower is better)
Translates to: SRPAPSCCSSTRGSS*SPRSRARPALSGHR
Trigger: CCTGTGCCCAGACAGTGCTGGCCGTGCTCTACTACGAGGAGACCAAGAGCTTCCTCTGGTGGACGAGCAACATGATGGTGCTGGGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGAAGGGCTTCTCCCCGTaGGCCTCTGCCTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GSISSTQSTPQHASGVQEKGFSP*ASASAE
Trigger: CTCTGCAGAGGCAGAGGCCAACGGGGAGAAGCCCTT...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp GGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGAGAGCGCTGAGGCCTTaGCACAGCAGCGTGGTCACC +
Preference number: 5 (lower is better)
Translates to: GSISSTQSTPQHASGVQERALRP*HSSVVT
Trigger: GGTGACCACGCTGCTGTGCAAAGGCCTCAGCGCTCT...CTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp GGATACAGCGAGAAGGCACCATCTATGGATCGGGAAACAGCCCTCAGCGGAGTCGCCGTGCCCGACACATaGTGGGTCAGCGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: GYSEKAPSMDRETALSGVAVPDT*WVSGLV
Trigger: CACCAGTCCGCTGACCCACAATGTGTCGGGCACGGC...GACTCCGCTGAGGGCTGTTTCCCGATCCATAGATGGTGCCTTCTCGCTGTATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCGTCTGGGCACAGGCCTaGGCCGTGCCCGACACATTG +
Preference number: 5 (lower is better)
Translates to: SISSTQSTPQHASGVQETVWAQA*AVPDTL
Trigger: CAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGAC...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp CTTCTGGGGTCCAGGAGACCGCCTTCACTACTGTGCTGGCCCCGCCTGTGTACGGCCACACCGACGTACTaGAGGCAGAGGTTATTGAAG +
Preference number: 5 (lower is better)
Translates to: LLGSRRPPSLLCWPRLCTATPTY*RQRLLK
Trigger: CTTCAATAACCTCTGCCTCAAGTACGTCGGTGTGGC...CGTACACAGGCGGGGCCAGCACAGTAGTGAAGGCGGTCTCCTGGACCCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCGCCGTGCCCGACACATaGTGGGTCAGCGGACTGGTG +
Preference number: 5 (lower is better)
Translates to: LIGSISSTQSTPQHASGVAVPDT*WVSGLV
Trigger: CACCAGTCCGCTGACCCACAATGTGTCGGGCACGGC...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCTCTTCTCGCTGTCTTaGGGGCTGGGCTCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: LIGSISSTQSTPQHASGVLFSLS*GLGSSG
Trigger: TCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGAG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS TCA 90 bp CTTGAGCAGCAGGTAGGAGAGCAGCACGTTGAAGACGGTGGTGAGTaGGCGGCCCACATTGTAGAAGGCCACACCGACGTACTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LEQQVGEQHVEDGGE*AAHIVEGHTDVLEA
Trigger: TGCCTCAAGTACGTCGGTGTGGCCTTCTACAATGTGGGCCGCTCACTCACCACCGTCTTCAACGTGCTGCTCTCCTACCTGCTGCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314134.4
ENST00000442528.2
ENST00000530471.1
CDS-3UTR CAA 90 bp CCAGGCCACACTTTCCTCCAAAGGAAGGCCGGTCTGTGGGCCCAGGGTGAGGCTTTTGTGGCTTTGCCATaGCTGTCCCTTCAAGGTTGT +
Preference number: 5 (lower is better)
Translates to: PGHTFLQRKAGLWAQGEAFVALP*LSLQGC
Trigger: ACAACCTTGAAGGGACAGCAATGGCAAAGCCACAAA...AGCCTCACCCTGGGCCCACAGACCGGCCTTCCTTTGGAGGAAAGTGTGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGTCTGGGCACAGGCCTaGGCCGTGCCCGACACATTG +
Preference number: 5 (lower is better)
Translates to: NHRILIGSISSTQSTPQHVWAQA*AVPDTL
Trigger: CAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGAC...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCCCAGCACCATCATGTaGCTCGTCCACCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LIGSISSTQSTPQHASGVPSTIM*LVHQRK
Trigger: CTTCCTCTGGTGGACGAGCAACATGATGGTGCTGGG...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCAAGGGCTTCTCCCCGTaGGCCTCTGCCTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: GACLFVLLPLRIQREGTIKGFSP*ASASAE
Trigger: CTCTGCAGAGGCAGAGGCCAACGGGGAGAAGCCCTT...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCAGCGGACTGGTGAACTaGATCTGCAGTCCTGTCACG +
Preference number: 5 (lower is better)
Translates to: LIGSISSTQSTPQHASGVSGLVN*ICSPVT
Trigger: CGTGACAGGACTGCAGATCAAGTTCACCAGTCCGCT...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS TCA 90 bp TCACATGTGGGCTGGCCTAAAGGCCTCCCCATTGTCCTCATGGATTaGGAAGTTCTGCTTTGGGGTGAGCCCAGTTGTGCTGCTCCACAA +
Preference number: 5 (lower is better)
Translates to: SHVGWPKGLPIVLMD*EVLLWGEPSCAAPQ
Trigger: TTGTGGAGCAGCACAACTGGGCTCACCCCAAAGCAGAACTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAGGCCAGCCCACATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CCA 90 bp CATTGTCACATGTGGGCTGGCCTAAAGGCCTCCCCATTGTCCTCATaGATTGAGAAGTTCTGCTTTGGGGTGAGCCCAGTTGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HCHMWAGLKASPLSS*IEKFCFGVSPVVLL
Trigger: GAGCAGCACAACTGGGCTCACCCCAAAGCAGAACTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGCTCTTCTCGCTGTCTTaGGGGCTGGGCTCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: HWFLLNHRILIGSISSTQLFSLS*GLGSSG
Trigger: TCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGAG...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp TCAGAAATCACCCCAAGAGAAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGTATGGCCCCGAAATTaGTGTGTGTCCCCCACTCCC +
Preference number: 5 (lower is better)
Translates to: SEITPRERTYQMPTRRARVWPRN*CVSPTP
Trigger: GGGAGTGGGGGACACACACAAATTTCGGGGCCATAC...CCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTTCTCTTGGGGTGATTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp CTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCGAAGCCTTTGTGGCTTaGCCATTGCTGTCCCTTCAA +
Preference number: 5 (lower is better)
Translates to: LIGSISSTQSTPQHASGVEAFVA*PLLSLQ
Trigger: TTGAAGGGACAGCAATGGCAAAGCCACAAAGGCTTC...GACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp AAAGGACATACCAAATGCCCACCAGAAGGGCCAGGGACTGCAAGCCACCCTGAGCAGGAAGGAGCTTGCTaGTTTGTGCTTCTACCATTG +
Preference number: 5 (lower is better)
Translates to: KGHTKCPPEGPGTASHPEQEGAC*FVLLPL
Trigger: CAATGGTAGAAGCACAAACAAGCAAGCTCCTTCCTG...CTCAGGGTGGCTTGCAGTCCCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCAGCCGCAGCCCTCCATaGTCACATGTGGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: KHWFLLNHRILIGSISSTSRSPP*SHVGWP
Trigger: AGGCCAGCCCACATGTGACAATGGAGGGCTGCGGCT...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp ATTGGAATTCTCACCCCCAAGGTGACAGTATTAGGAGGTGGGGCCTTTGGAGCTGCCACACCGACGTACTaGAGGCAGAGGTTATTGAAG +
Preference number: 5 (lower is better)
Translates to: IGILTPKVTVLGGGAFGAATPTY*RQRLLK
Trigger: CTTCAATAACCTCTGCCTCAAGTACGTCGGTGTGGC...AGCTCCAAAGGCCCCACCTCCTAATACTGTCACCTTGGGGGTGAGAATTCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp GCTGGACATACAGGGTGTATAGATGGTGAGCACTTTCTCACAATCCACCCCATTGCTGTCCCTTCAAGGTaGTTGCCTGTCCCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGHTGCIDGEHFLTIHPIAVPSR*LPVPVL
Trigger: GAGGACAGGGACAGGCAACAACCTTGAAGGGACAGC...AATGGGGTGGATTGTGAGAAAGTGCTCACCATCTATACACCCTGTATGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp TCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGGTCCAGGAGACCAGAAGCATGGTTCCCTaGTGTTCAAAAGCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SISSTQSTPQHASGVQETRSMVP*CSKAGH
Trigger: ATGTCCAGCTTTTGAACACAAGGGAACCATGCTTCT...GGTCTCCTGGACCCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp CACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTCTAAAGGCCTCCCCATaGTCCTCATGGATTGAGAAG +
Preference number: 5 (lower is better)
Translates to: HRILIGSISSTQSTPQHALKASP*SSWIEK
Trigger: CTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAG...AGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGAGCGGACTGGTGAACTaGATCTGCAGTCCTGTCACG +
Preference number: 5 (lower is better)
Translates to: HWFLLNHRILIGSISSTQSGLVN*ICSPVT
Trigger: CGTGACAGGACTGCAGATCAAGTTCACCAGTCCGCT...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp CACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGGTCCCTTCAAGGTTGTaGCCTGTCCCTGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: HWFLLNHRILIGSISSTQVPSRL*PVPVLR
Trigger: TCTGAGGACAGGGACAGGCAACAACCTTGAAGGGAC...CTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp AACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGAGGCAGGAAGGAGCTaGCTTGTTTGTGCTTCTACC +
Preference number: 5 (lower is better)
Translates to: NHRILIGSISSTQSTPQHEAGRS*LVCAST
Trigger: GGTAGAAGCACAAACAAGCAAGCTCCTTCCTGCCTC...GTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAATACGGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp AAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGCACCCCCAGCACCATCATGTaGCTCGTCCACCAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KHWFLLNHRILIGSISSTPSTIM*LVHQRK
Trigger: CTTCCTCTGGTGGACGAGCAACATGATGGTGCTGGG...GGTGCTACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS-3UTR CAA 90 bp GGAGCTTGCTTGTTTGTGCTTCTACCATTGAGGATACAGCGAGAAGGCACCATCCCCTGCAAATTCACATaGGAATTCTCACCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: GACLFVLLPLRIQREGTIPCKFT*EFSPPR
Trigger: CCTTGGGGGTGAGAATTCCAATGTGAATTTGCAGGG...GATGGTGCCTTCTCGCTGTATCCTCAATGGTAGAAGCACAAACAAGCAAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp ATTCTGATTGGGTCTATAAGTAGCACCCAGTCCACACCACAGCACGCTTCTGGGAGGATAGAGAAGGGTTaGGCAACTTTCTGGTATTAC +
Preference number: 5 (lower is better)
Translates to: ILIGSISSTQSTPQHASGRIEKG*ATFWYY
Trigger: GTAATACCAGAAAGTTGCCAAACCCTTCTCTATCCT...CCCAGAAGCGTGCTGTGGTGTGGACTGGGTGCTACTTATAGACCCAATCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS-3UTR CAA 90 bp ACTTGTAAACACTGGTTCCTTCTCAACCACCGTATTCTGATTGGGTCTATAAGTAGTACAGTGAAGCCTTaGTGGCTTTGCCATTGCTGT +
Preference number: 5 (lower is better)
Translates to: TCKHWFLLNHRILIGSISSTVKP*WLCHCC
Trigger: ACAGCAATGGCAAAGCCACAAAGGCTTCACTGTACT...ACTTATAGACCCAATCAGAATACGGTGGTTGAGAAGGAACCAGTGTTTACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS GCA 72 bp GCCTCGCCGGCCTGTTCGCGGCATGGGCCCCGGGGGTaGCGGCGGAGAGGCGGTGATCCGGACGGTCGTGGG +
Preference number: 6 (lower is better)
Translates to: ASPACSRHGPRG*RRRGGDPDGRG
Trigger: CCCACGACCGTCCGGATCACCGCCTCTCCGCCGGCACCCCCGGGGCCCATGCCGCGAACAGGCCGGCGAGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS GCA 72 bp CCCCGGCCGGTCCAGCCGCATCAGCTCCCGCGTCCCTaGCTGTGTCCCCGGGCCGCGAAGGCGACCTGGCGC +
Preference number: 6 (lower is better)
Translates to: PRPVQPHQLPRP*LCPRAAKATWR
Trigger: GCGCCAGGTCGCCTTCGCGGCCCGGGGACACAGGCAGGGACGCGGGAGCTGATGCGGCTGGACCGGCCGGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 72 bp ACGCGGGAGGGGGCTGGGCCGGCGCCCACGTCTCGCTaGCTTCCCGGGCTCTGTCGCCGGCTCAGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: TREGAGPAPTSR*LPGLCRRLSPG
Trigger: TCCTGGGCTGAGCCGGCGACAGAGCCCGGGAAGGCAGCGAGACGTGGGCGCCGGCCCAGCCCCCTCCCGCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000530471.1
CDS GCA 72 bp GCCGCACCCTGGGCCGCGCCCGCGGGATCGACTTCCTaGTTTCCGCCCCGGGCCCGGGCACCTTGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: AAPWAAPAGSTS*FPPRARAPCQP
Trigger: AGGCTGGCAAGGTGCCCGGGCCCGGGGCGGAAAGCAGGAAGTCGATCCCGCGGGCGCGGCCCAGGGTGCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS GCA 72 bp GGGCCGCGAAGGCGACCTGGCGCTCACCTCCTCCGGTaGACTGGGCGCCCGCCCCGCGACCCCGTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: GPRRRPGAHLLR*TGRPPRDPVLH
Trigger: ATGCAGCACGGGGTCGCGGGGCGGGCGCCCAGTGCACCGGAGGAGGTGAGCGCCAGGTCGCCTTCGCGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS CCA 72 bp CGTCCCTGCCTGTGTCCCCGGGCCGCGAAGGCGACCTaGCGCTCACCTCCTCCGGTGCACTGGGCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: RPCLCPRAAKAT*RSPPPVHWAPA
Trigger: GGCGGGCGCCCAGTGCACCGGAGGAGGTGAGCGCCAGGTCGCCTTCGCGGCCCGGGGACACAGGCAGGGACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS GCA 72 bp TCGACTTCCTGCTTTCCGCCCCGGGCCCGGGCACCTTaGCAGCCTCGCCGGCCTGTTCGCGGCATGGGCCCC +
Preference number: 6 (lower is better)
Translates to: STSCFPPRARAP*QPRRPVRGMGP
Trigger: GGGGCCCATGCCGCGAACAGGCCGGCGAGGCTGGCAAGGTGCCCGGGCCCGGGGCGGAAAGCAGGAAGTCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS CCA 72 bp TGGGAAGAGGTGCCGAGAGGGCGTCATGGGCGGCTGTaGGAGGGAGGGGCGGGCAGGGGGAGGGAGGCGTAC +
Preference number: 6 (lower is better)
Translates to: WEEVPRGRHGRL*EGGAGRGREAY
Trigger: GTACGCCTCCCTCCCCCTGCCCGCCCCTCCCTCCCACAGCCGCCCATGACGCCCTCTCGGCACCTCTTCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CCA 72 bp CCCGCCCGCCCGGGACCCGGCTTCAGTTACCGCAGCTaGCACGTCCCGGGACTTGGCTGTATCCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: PARPGPGFSYRS*HVPGLGCIPGP
Trigger: CGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAAGCCGGGTCCCGGGCGGGCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS CCA 72 bp GGTCTGAGGCCCCGGTCAGCGCCATGTGCAGGATCCTaGACCGCTTCAGAGGGGCCAGGGAGCTGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: GLRPRSAPCAGS*TASEGPGSCRR
Trigger: CCTCCGGCAGCTCCCTGGCCCCTCTGAAGCGGTCCAGGATCCTGCACATGGCGCTGACCGGGGCCTCAGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530471.1
CDS CAA 90 bp GCCCGGGACCCGGCTTCAGTTACCGCAGCTGGCACGTCCCGGGACTaGGCTGTATCCCTGGCCCGCCGCGCTACCGGCTTGCACTTCCAG +
Preference number: 6 (lower is better)
Translates to: ARDPASVTAAGTSRD*AVSLARRATGLHFQ
Trigger: CTGGAAGTGCAAGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAAGCCGGGTCCCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS GCA 72 bp GCCGAAGACGGTGCCCAGCCACGACAGGGTGCCTTCTaGCCCCTCCTGGTCCACACCAAGCCAGAAGCCCCC +
Preference number: 6 (lower is better)
Translates to: AEDGAQPRQGAF*PLLVHTKPEAP
Trigger: GGGGGCTTCTGGCTTGGTGTGGACCAGGAGGGGGCAGAAGGCACCCTGTCGTGGCTGGGCACCGTCTTCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CCA 72 bp CGGCTTCAGTTACCGCAGCTGGCACGTCCCGGGACTTaGCTGTATCCCTGGCCCGCCGCGCTACCGGCTTGC +
Preference number: 6 (lower is better)
Translates to: RLQLPQLARPGT*LYPWPAALPAC
Trigger: GCAAGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS CCA 72 bp GGTCTGAGGCCCCGGTCAGCGCCATGTGCAGGATCCTaGACCGCTTCAGAGGGGCCCTCCTCCGGTGCACTG +
Preference number: 6 (lower is better)
Translates to: GLRPRSAPCAGS*TASEGPSSGAL
Trigger: CAGTGCACCGGAGGAGGGCCCCTCTGAAGCGGTCCAGGATCCTGCACATGGCGCTGACCGGGGCCTCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526817.1
CDS CAA 72 bp CCGGCTTCAGTTACCGCAGCTGGCACGTCCCGGGACTaGGCTGTATCCCTGGCCCGCCGCGCTACCGGCTTG +
Preference number: 6 (lower is better)
Translates to: PASVTAAGTSRD*AVSLARRATGL
Trigger: CAAGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGGTAACTGAAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442528.2
ENST00000526817.1
CDS CCA 72 bp CGGGGCGAAGGTGCAGGAAAAGGACGCGTGGCAGAGTaGGAAGAGGTGCCGAGAGGGCGTCATGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: RGEGAGKGRVAE*EEVPRGRHGRL
Trigger: CAGCCGCCCATGACGCCCTCTCGGCACCTCTTCCCACTCTGCCACGCGTCCTTTTCCTGCACCTTCGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CCA 72 bp CCGCAGCTGGCACGTCCCGGGACTTGGCTGTATCCCTaGCCCGCCGCGCTACCGGCTTGCACTTCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: PQLARPGTWLYP*PAALPACTSRS
Trigger: ACTTCTGGAAGTGCAAGCCGGTAGCGCGGCGGGCCAGGGATACAGCCAAGTCCCGGGACGTGCCAGCTGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442528.2
CDS CCA 72 bp CCAAACAGGCCGCCCAGCGTCATCATCCCCCAGAAGTaGGCACTGCCCAGCTGGGCAAAGTCACGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: PNRPPSVIIPQK*ALPSWAKSRRA
Trigger: GGCCCTGCGTGACTTTGCCCAGCTGGGCAGTGCCCACTTCTGGGGGATGATGACGCTGGGCGGCCTGTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CCA 72 bp GGGCCATCCAGGGTGCCTGTGGTGCTCACACCCCCATaGCGCTCTTCTCGCTGTCTTTGGGGCTGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GPSRVPVVLTPP*RSSRCLWGWAP
Trigger: AGGAGCCCAGCCCCAAAGACAGCGAGAAGAGCGCCATGGGGGTGTGAGCACCACAGGCACCCTGGATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CCA 72 bp AGTAGAGCACGGCCAGCACTGTCTGGGCACAGGCCTTaGCCGTGCCCGACACATTGTGGGTCAGCGGACTGG +
Preference number: 6 (lower is better)
Translates to: SRARPALSGHRP*PCPTHCGSADW
Trigger: CCAGTCCGCTGACCCACAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGACAGTGCTGGCCGTGCTCTACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS GCA 72 bp GACCCAGTAGAGGGAGACCACCAGCGCGATCTGCAATaGCCGCAGCAGAAAGGGCTTCTCCCCGTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: DPVEGDHQRDLQ*PQQKGLLPVGL
Trigger: GAGGCCAACGGGGAGAAGCCCTTTCTGCTGCGGGCATTGCAGATCGCGCTGGTGGTCTCCCTCTACTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314134.4
ENST00000442528.2
ENST00000526817.1
ENST00000530471.1
CDS CCA 72 bp GTGCTCACACCCCCATGGCGCTCTTCTCGCTGTCTTTaGGGCTGGGCTCCTCCGGAGTCTTCTTCATCTCCC +
Preference number: 6 (lower is better)
Translates to: VLTPPWRSSRCL*GWAPPESSSSP
Trigger: GGGAGATGAAGAAGACTCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGAGCGCCATGGGGGTGTGAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CAA 72 bp GGTGCTCACACCCCCATGGCGCTCTTCTCGCTGTCTTaGGGGCTGGGCTCCTCCGGAGTCTTCTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: GAHTPMALFSLS*GLGSSGVFFIS
Trigger: GGAGATGAAGAAGACTCCGGAGGAGCCCAGCCCCAAAGACAGCGAGAAGAGCGCCATGGGGGTGTGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS GCA 72 bp AGGTGTAGGCGGAGGAGCCGCCCAGCACCATCATGTTaGTCGTCCACCAGAGGAAGCTCTTGGTCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: RCRRRSRPAPSC*SSTRGSSWSPR
Trigger: ACGAGGAGACCAAGAGCTTCCTCTGGTGGACGAGCAACATGATGGTGCTGGGCGGCTCCTCCGCCTACACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CCA 72 bp CTCCGCAAGGAAGCCGCAGCCCTCCATTGTCACATGTaGGCTGGCCTAAAGGCCTCCCCATTGTCCTCATGG +
Preference number: 6 (lower is better)
Translates to: LRKEAAALHCHM*AGLKASPLSSW
Trigger: CCATGAGGACAATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAATGGAGGGCTGCGGCTTCCTTGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CCA 72 bp GTCTGGGCACAGGCCTTGGCCGTGCCCGACACATTGTaGGTCAGCGGACTGGTGAACTTGATCTGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: VWAQALAVPDTL*VSGLVNLICSP
Trigger: AGGACTGCAGATCAAGTTCACCAGTCCGCTGACCCACAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CAA 72 bp CACTTGTGCTCTCCGCAAGGAAGCCGCAGCCCTCCATaGTCACATGTGGGCTGGCCTAAAGGCCTCCCCATT +
Preference number: 6 (lower is better)
Translates to: HLCSPQGSRSPP*SHVGWPKGLPI
Trigger: AATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAATGGAGGGCTGCGGCTTCCTTGCGGAGAGCACAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CAA 72 bp ACTGTCTGGGCACAGGCCTTGGCCGTGCCCGACACATaGTGGGTCAGCGGACTGGTGAACTTGATCTGCAGT +
Preference number: 6 (lower is better)
Translates to: TVWAQALAVPDT*WVSGLVNLICS
Trigger: ACTGCAGATCAAGTTCACCAGTCCGCTGACCCACAATGTGTCGGGCACGGCCAAGGCCTGTGCCCAGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS TCA 72 bp CAGGTAGGAGAGCAGCACGTTGAAGACGGTGGTGAGTaGGCGGCCCACATTGTAGAAGGCCACACCGACGTA +
Preference number: 6 (lower is better)
Translates to: QVGEQHVEDGGE*AAHIVEGHTDV
Trigger: TACGTCGGTGTGGCCTTCTACAATGTGGGCCGCTCACTCACCACCGTCTTCAACGTGCTGCTCTCCTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314134.4
ENST00000442528.2
ENST00000530471.1
CDS CCA 72 bp GCACCATCATGTTGCTCGTCCACCAGAGGAAGCTCTTaGTCTCCTCGTAGTAGAGCACGGCCAGCACTGTCT +
Preference number: 6 (lower is better)
Translates to: APSCCSSTRGSS*SPRSRARPALS
Trigger: AGACAGTGCTGGCCGTGCTCTACTACGAGGAGACCAAGAGCTTCCTCTGGTGGACGAGCAACATGATGGTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314134.4
ENST00000442528.2
CDS CAA 90 bp GCAGCCCTCCATTGTCACATGTGGGCTGGCCTAAAGGCCTCCCCATaGTCCTCATGGATTGAGAAGTTCTGCTTTGGGGTGAGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: AALHCHMWAGLKASP*SSWIEKFCFGVSPV
Trigger: AACTGGGCTCACCCCAAAGCAGAACTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAATGGAGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS TCA 72 bp GGCTGGCCTAAAGGCCTCCCCATTGTCCTCATGGATTaGGAAGTTCTGCTTTGGGGTGAGCCCAGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: GWPKGLPIVLMD*EVLLWGEPSCA
Trigger: AGCACAACTGGGCTCACCCCAAAGCAGAACTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4
CDS CAA 72 bp CATTGTCACATGTGGGCTGGCCTAAAGGCCTCCCCATaGTCCTCATGGATTGAGAAGTTCTGCTTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: HCHMWAGLKASP*SSWIEKFCFGV
Trigger: CACCCCAAAGCAGAACTTCTCAATCCATGAGGACAATGGGGAGGCCTTTAGGCCAGCCCACATGTGACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314134.4