RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157593

Ensembl transcript IDs: ENST00000393810.5, ENST00000393812.4, ENST00000495706.1, ENST00000537814.2, ENST00000538577.5, ENST00000615337.4, ENST00000619636.4

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCTGGCAAAGGAGTACCGGTACATGGGTGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAGAGGCCAGCCACAATCAGTGCCAGC +
Preference number: 1 (lower is better)
Translates to: RLAKEYRYMGAPCRG*LQRTQERPATISAS
Trigger: GCTGGCACTGATTGTGGCTGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR TCA 90 bp TGGAGAGTAGCAGGGCATGGGCAGCAAACTCACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTAGGGCCCCCTGTTCTAGCAGTGAGC +
Preference number: 1 (lower is better)
Translates to: WRVAGHGQQTHCVAP*SGFPPVGPPVLAVS
Trigger: GCTCACTGCTAGAACAGGGGGCCCTACTGGAGGGAACCCGCTTCATGGGGCGACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR GCA 90 bp TGGCAAAGGAGTACCGGTACATGGGTGCCCCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGCCAGCCACAATCAGTGCCAGCACTC +
Preference number: 1 (lower is better)
Translates to: WQRSTGTWVPHAGAA*REHRRGQPQSVPAL
Trigger: GAGTGCTGGCACTGATTGTGGCTGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR CCA 90 bp AGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTaGTGCTGGGCAGGGCTCTGCATCCCCTTTCCTCAGCACAGCACC +
Preference number: 1 (lower is better)
Translates to: RLMEQSLGIQEHRRW*CWAGLCIPFPQHST
Trigger: GGTGCTGTGCTGAGGAAAGGGGATGCAGAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CCA 90 bp AACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTCTGCATCCCCTTTCCTCAGCACAGC +
Preference number: 1 (lower is better)
Translates to: NRLMEQSLGIQEHRR*WCWAGLCIPFPQHS
Trigger: GCTGTGCTGAGGAAAGGGGATGCAGAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CCA 90 bp ATGAAGAGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGTCGCCCCATGAAGCGGGTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: MKSWPHAEQMESSRA*AANSLCRPMKRVPS
Trigger: GGAGGGAACCCGCTTCATGGGGCGACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCTCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR CCA 90 bp CCCATCAGCATGACAGGGATCACCTTAGAGGCCTTGGCCAGCACCTaGGTGGGGAAGCTGACGAACTTAAGAGCTTCGTATTGGCACCAG +
Preference number: 1 (lower is better)
Translates to: PISMTGITLEALAST*VGKLTNLRASYWHQ
Trigger: CTGGTGCCAATACGAAGCTCTTAAGTTCGTCAGCTTCCCCACCCAGGTGCTGGCCAAGGCCTCTAAGGTGATCCCTGTCATGCTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR GCA 90 bp CATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGAGTGAGTCTGGAAGGTGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: HWSLHRLCFSHQGKK*RYLQRGVSLEGGRA
Trigger: TGCTCTGCCACCTTCCAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CCA 90 bp TTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGC +
Preference number: 1 (lower is better)
Translates to: FPQHSTIFTLLGKQH*SLHRLCFSHQGKKC
Trigger: GCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR GCA 90 bp ATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGA +
Preference number: 1 (lower is better)
Translates to: IFTLLGKQHWSLHRL*FSHQGKKCRYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp AAGGATGGCAAAGGCCTGGCGGAGGGTCATGATGATGGTGAAGACGGCAGCCCCGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: KDGKGLAEGHDDGEDGSPGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...GGGGCTGCCGTCTTCACCATCATCATGACCCTCCGCCAGGCCTTTGCCATCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CAA 90 bp CTGGCAAAGGAGTACCGGTACATGGGTGCCCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGGCCAGCCACAATCAGTGCCAGCACT +
Preference number: 2 (lower is better)
Translates to: LAKEYRYMGAPCRGC*QRTQERPATISAST
Trigger: AGTGCTGGCACTGATTGTGGCTGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp AGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATGGGCAGCAAACTCAGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SWPHAEQMESSRAWAANSVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...TGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 2 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp AGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATGGGCAGCAAACTCATACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: SWPHAEQMESSRAWAANSYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...TGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp CTGTGTCGCCCCATGAAGCGGGTTCCCTCCAGTAGGGCCCCCTGTTCTAGCAGTCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: LCRPMKRVPSSRAPCSSSLGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...ACTGCTAGAACAGGGGGCCCTACTGGAGGGAACCCGCTTCATGGGGCGACACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR TCA 90 bp CAGGAGACTCAACAGGCACAGCCTTCTTTCCCCGTTGCTTTAGACGGCCCCGCGAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: QETQQAQPSFPVALDGPANLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...CGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGCTGTGCCTGTTGAGTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: SWESSIGAYTACAFLTRVGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp AAGGATGGCAAAGGCCTGGCGGAGGGTCATGATGATGGTGAAGACGGCAGCCCCGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 2 (lower is better)
Translates to: KDGKGLAEGHDDGEDGSPESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...GGGGCTGCCGTCTTCACCATCATCATGACCCTCCGCCAGGCCTTTGCCATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp CAGGAGACTCAACAGGCACAGCCTTCTTTCCCCGTTGCTTTAGACGGCCCCGCGAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 2 (lower is better)
Translates to: QETQQAQPSFPVALDGPASLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...CGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGCTGTGCCTGTTGAGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CAA 90 bp CTGACGAACTTAAGAGCTTCGTATTGGCACCAGCTGCTAAGCACATaGGACAGGCTGGCAAAGGAGTACCGGTACATGGGTGCCCCATGC +
Preference number: 2 (lower is better)
Translates to: LTNLRASYWHQLLST*DRLAKEYRYMGAPC
Trigger: GCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAGTTCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR GCA 90 bp GCTGACGAACTTAAGAGCTTCGTATTGGCACCAGCTGCTAAGCACATTGGACAGCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: ADELKSFVLAPAAKHIGQHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...CTGTCCAATGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAGTTCGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: APSSPSWESSIGAYTACAYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGTGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGCGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CAA 90 bp CTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTaGCAGAGGGGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGG +
Preference number: 2 (lower is better)
Translates to: LHRLCFSHQGKKCRY*QRGVSLEGGRAQLG
Trigger: CCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR GCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTCCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR GCA 90 bp AGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCCCAAACATCATCTGCCCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SEPTVKRQEKKLTPNIICPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...GCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTCCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: APSSPSWESSIGAYTACACGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 2 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR GCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACGCAAACAGGGCATCCTaGCAGTTTGAGGTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYANRAS*QFEVKL
Trigger: CAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGC...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTTGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 2 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPCGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR GCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: TACAFLTRVRNAGICRGEYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 2 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR TCA 90 bp AGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCCCAAACATCATCTGCCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 2 (lower is better)
Translates to: SEPTVKRQEKKLTPNIICPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...GCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 2 (lower is better)
Translates to: TARARLKGTCGKSNWNLPLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR TCA 72 bp GCAGGGCATGGGCAGCAAACTCACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTAGGGCCCCCTGTTCTA +
Preference number: 3 (lower is better)
Translates to: AGHGQQTHCVAP*SGFPPVGPPVL
Trigger: TAGAACAGGGGGCCCTACTGGAGGGAACCCGCTTCATGGGGCGACACAGTGAGTTTGCTGCCCATGCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR GCA 72 bp AGGCTGGCAAAGGAGTACCGGTACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGAACACAGGAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: RLAKEYRYMGAP*RGCLQRTQERP
Trigger: TGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR GCA 72 bp AGTACCGGTACATGGGTGCCCCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGCCAGCCACAATCAGTG +
Preference number: 3 (lower is better)
Translates to: STGTWVPHAGAA*REHRRGQPQSV
Trigger: CACTGATTGTGGCTGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR CCA 72 bp GCACATTGGACAGGCTGGCAAAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCTGCTTGCAGAGAACAC +
Preference number: 3 (lower is better)
Translates to: AHWTGWQRSTGT*VPHAGAACREH
Trigger: GTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR GCA 72 bp ATTGGACAGGCTGGCAAAGGAGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTTGCAGAGAACACAGGA +
Preference number: 3 (lower is better)
Translates to: IGQAGKGVPVHG*PMPGLLAENTG
Trigger: TCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCTGTCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CAA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTACCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SWESSIGAYTACAFLTRVPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR CCA 72 bp TCAGCCAGCTCCCTCAGAGGTTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCACTTCACCCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SASSLRGYSRRG*WEGPISLHPSG
Trigger: GCCTGAGGGGTGAAGTGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTAACCTCTGAGGGAGCTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR CCA 72 bp TCCCCTTTCCTCAGCACAGCACCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCT +
Preference number: 3 (lower is better)
Translates to: SPFLSTAPSSPS*ESSIGAYTACA
Trigger: AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: APSSPSWESSIGAYTACAENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: APSSPSWESSIGAYTACAPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR TCA 72 bp AGACGGCAGCCCCAAACTGCCCAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGGAGCAGATGGAGAGTA +
Preference number: 3 (lower is better)
Translates to: RRQPQTAQWCKR*RAGHMRSRWRV
Trigger: TACTCTCCATCTGCTCCGCATGTGGCCAGCTCTTCATCTTTTACACCATTGGGCAGTTTGGGGCTGCCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR CCA 72 bp TGGGTGGGGAAGCTGACGAACTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACATTGGACAGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: WVGKLTNLRASY*HQLLSTLDRLA
Trigger: TGCCAGCCTGTCCAATGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAGTTCGTCAGCTTCCCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR-3UTR CAA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAAGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: TARARLKGTCGKSNWNLPENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR GCA 72 bp CTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGAGTGAGTCTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: LHRLCFSHQGKK*RYLQRGVSLEG
Trigger: ACCTTCCAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR GCA 72 bp CTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAGAAATGCAGGTATTTG +
Preference number: 3 (lower is better)
Translates to: LLGKQHWSLHRL*FSHQGKKCRYL
Trigger: CAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
3UTR-3UTR CAA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 3 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR TCA 72 bp GGAGAAGAAATTGACCCCAAACATCATCTGCACCGATaGCATCTTATAGGCAAACAGGGCATCCTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: GEEIDPKHHLHR*HLIGKQGILPV
Trigger: AACTGGCAGGATGCCCTGTTTGCCTATAAGATGTCATCGGTGCAGATGATGTTTGGGGTCAATTTCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
3UTR TCA 72 bp TCTTATAGGCAAACAGGGCATCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATATAACCTGCCAGTAAGA +
Preference number: 3 (lower is better)
Translates to: SYRQTGHPASLR*SCQKQYNLPVR
Trigger: TCTTACTGGCAGGTTATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGCCTATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGATGGTCCAGGCCGCGTaGGGTGGAGGGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGMVQAA*GGGGTG
Trigger: CCCGGTTCCCCCTCCACCCCACGCGGCCTGGACCAT...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
CDS-3UTR GCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGCATCGGGGTGGTCTCTaGCGCCTCTGTTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGHRGGL*RLCSGR
Trigger: GCGCCCCGAACAGAGGCGGCAGAGACCACCCCGATG...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATGGGCAGCAAACTCAATGGTCCAGGCCGCGTaGGGTGGAGGGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: SWPHAEQMESSRAWAANSMVQAA*GGGGTG
Trigger: CCCGGTTCCCCCTCCACCCCACGCGGCCTGGACCAT...TGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp CGGGTTCCCTCCAGTAGGGCCCCCTGTTCTAGCAGTGAGCCCACTGTGAAGAGGCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RVPSSRAPCSSSEPTVKRPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...CCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGCCCTACTGGAGGGAACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp CAGGAGACTCAACAGGCACAGCCTTCTTTCCCCGTTGCTTTAGACGGCCCCGCGACCATCTGGCGTCCATaGTCCAGGCCGCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QETQQAQPSFPVALDGPATIWRP*SRPRGV
Trigger: CACCCCACGCGGCCTGGACCATGGACGCCAGATGGT...CGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGCTGTGCCTGTTGAGTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGAGCTCCCATCCCCGCTaGCTCCGGGCAGCGATATGC +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGSSHPR*LRAAIC
Trigger: GCATATCGCTGCCCGGAGCCAGCGGGGATGGGAGCT...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619636.4
CDS-3UTR GCA 90 bp GCCCCCTGTTCTAGCAGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCAGCGGCCAGCGGAAGTaGCGCGCTCTTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: APCSSSEPTVKRQEKKLTSGQRK*RALPAS
Trigger: GGAGGCGGGAAGAGCGCGGCACTTCCGCTGGCCGCT...GGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp CAGGAGACTCAACAGGCACAGCCTTCTTTCCCCGTTGCTTTAGACGGCCCCGCGCACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QETQQAQPSFPVALDGPAHCVAP*SGFPPV
Trigger: TACTGGAGGGAACCCGCTTCATGGGGCGACACAGTG...CGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGCTGTGCCTGTTGAGTCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCTCCGGGCAGCGATATaGTGGCCGACGGCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTLRAAI*WPTAEQ
Trigger: CTGCTCGGCCGTCGGCCAGCATATCGCTGCCCGGAG...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619636.4
CDS-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTATGGTCCAGGCCGCGTaGGGTGGAGGGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELMVQAA*GGGGTG
Trigger: CCCGGTTCCCCCTCCACCCCACGCGGCCTGGACCAT...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
CDS-3UTR CCA 90 bp ACACAGGAGAGGCCAGCCACAATCAGTGCCAGCACTCGGTTCATTAGCACCAGGCCACTGCCCACCATCTaGCGTCCATGGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TQERPATISASTRFISTRPLPTI*RPWSRP
Trigger: CGGCCTGGACCATGGACGCCAGATGGTGGGCAGTGG...CCTGGTGCTAATGAACCGAGTGCTGGCACTGATTGTGGCTGGCCTCTCCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp CTGTGTCGCCCCATGAAGCGGGTTCCCTCCAGTAGGGCCCCCTGTTCTAGCAGTCGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LCRPMKRVPSSRAPCSSSRKNHS*VHDSGG
Trigger: CCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCG...ACTGCTAGAACAGGGGGCCCTACTGGAGGGAACCCGCTTCATGGGGCGACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CGGGTTCCCTCCAGTAGGGCCCCCTGTTCTAGCAGTGAGCCCACTGTGAAGAGGCTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RVPSSRAPCSSSEPTVKRLWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...CCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGCCCTACTGGAGGGAACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTTCCCATCAGCATGACAGGGATCACCTTAGAGGCCTTGGCCAGCACCTGGGTGGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FPISMTGITLEALASTWVVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...CACCCAGGTGCTGGCCAAGGCCTCTAAGGTGATCCCTGTCATGCTGATGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGCCTTCTTTCCCCGTTaGTTTAGACGGCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAAFFPR*FRRPRA
Trigger: CGCGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGGCCTTCTTTCCCCGTTaGTTTAGACGGCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVAFFPR*FRRPRA
Trigger: CGCGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGC...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGGCCTTCTTTCCCCGTTaGTTTAGACGGCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLAFFPR*FRRPRA
Trigger: CGCGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGC...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAATGGTCCAGGCCGCGTaGGGTGGAGGGGGAACCGGG +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAMVQAA*GGGGTG
Trigger: CCCGGTTCCCCCTCCACCCCACGCGGCCTGGACCAT...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
CDS-3UTR CCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCCCCCTGTTCTAGCAGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: APCSSSEPTVKRQEKKLTGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...GGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACGACACCTGGCGTCCATaGTCCAGGCCGCGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHDTWRP*SRPRGV
Trigger: CACCCCACGCGGCCTGGACCATGGACGCCAGGTGTC...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537814.2
CDS-3UTR TCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAHCVAP*SGFPPV
Trigger: TACTGGAGGGAACCCGCTTCATGGGGCGACACAGTG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTAGCGGCCAGCGGAAGTaGCGCGCTCTTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGSGQRK*RALPAS
Trigger: GGAGGCGGGAAGAGCGCGGCACTTCCGCTGGCCGCT...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393810.5
ENST00000537814.2
ENST00000538577.5
CDS-3UTR GCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAAAGCGGCCAGCGGAAGTaGCGCGCTCTTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKSGQRK*RALPAS
Trigger: GGAGGCGGGAAGAGCGCGGCACTTCCGCTGGCCGCT...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393810.5
ENST00000537814.2
ENST00000538577.5
CDS-3UTR GCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTTCCCATCAGCATGACAGGGATCACCTTAGAGGCCTTGGCCAGCACCTGGGTGTACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FPISMTGITLEALASTWVYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...CACCCAGGTGCTGGCCAAGGCCTCTAAGGTGATCCCTGTCATGCTGATGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTACCACTGCCCACCATCTaGCGTCCATGGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVPLPTI*RPWSRP
Trigger: CGGCCTGGACCATGGACGCCAGATGGTGGGCAGTGG...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
CDS-3UTR CCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTCCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPRSTGT*VPHAGA
Trigger: AGCCCCGGCATGGGGCACCCATGTACCGGTACTCCT...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp AGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATGGGCAGCAAACTCAAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SWPHAEQMESSRAWAANSNLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...TGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTCACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPHCVAP*SGFPPV
Trigger: TACTGGAGGGAACCCGCTTCATGGGGCGACACAGTG...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGCATCGGGGTGGTCTCTaGCGCCTCTGTTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVHRGGL*RLCSGR
Trigger: GCGCCCCGAACAGAGGCGGCAGAGACCACCCCGATG...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCATCGGGGTGGTCTCTaGCGCCTCTGTTCGGGGCGC +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEHRGGL*RLCSGR
Trigger: GCGCCCCGAACAGAGGCGGCAGAGACCACCCCGATG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHRSTGT*VPHAGA
Trigger: AGCCCCGGCATGGGGCACCCATGTACCGGTACTCCT...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTTCCCATCAGCATGACAGGGATCACCTTAGAGGCCTTGGCCAGCACCTGGGTGCACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: FPISMTGITLEALASTWVHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...CACCCAGGTGCTGGCCAAGGCCTCTAAGGTGATCCCTGTCATGCTGATGGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACATTGGACAGGCTGGCAAAGGAGTACCGGTACATGGGTGCCCCATGCCGGGGCTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: TLDRLAKEYRYMGAPCRGYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...GCCCCGGCATGGGGCACCCATGTACCGGTACTCCTTTGCCAGCCTGTCCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCGGGCAGCGATATGCTaGCCGACGGCCGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLRAAIC*PTAEQP
Trigger: CGGCTGCTCGGCCGTCGGCCAGCATATCGCTGCCCG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619636.4
CDS-3UTR GCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGGTCATCACTCTTTCCTaGAGCACACCCCAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGVITLS*STPQVR
Trigger: TCTGACTTGGGGTGTGCTGCAGGAAAGAGTGATGAC...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLLWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTACATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACTACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTATACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGACTGCCCACCATCATTaGCATCTTGTGGACAGGACA +
Preference number: 4 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGTAHHH*HLVDRT
Trigger: TGTCCTGTCCACAAGATGGCAATGATGGTGGGCAGT...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCCACTGCCCACCATCTaGCGTCCATGGTCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGPLPTI*RPWSRP
Trigger: CGGCCTGGACCATGGACGCCAGATGGTGGGCAGTGG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGGGGAAGGCTGCCTCCTaGGCTCCCCAATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVGKAAS*APQSPA
Trigger: AGCAGGGGATTGGGGAGCCCAGGAGGCAGCCTTCCC...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACALGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLLGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACCTGCCACATCGGGGTaGTCTCTGCCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAPATSG*SLPPLF
Trigger: GAACAGAGGCGGCAGAGACCACCCCGATGTGGCAGG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
3UTR CAA 72 bp GCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: AQHHLHPPGKAA*EPTPLVLFSPG
Trigger: CCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTGGTAGTTCTTCCGCCTaGAGTACTGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPGSSSA*STAPGG
Trigger: ACCTCCTGGTGCAGTACTTCAGGCGGAAGAACTACC...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp AGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCCCAAACATCATCTGCGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: SEPTVKRQEKKLTPNIICAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...GCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAAGCCCCATGCCGGGGCTaGTTGCAGAGAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKAPCRG*LQRTQE
Trigger: CTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGC...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACGTACCGGTACATGGGTaGCCCATGCCGGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYVPVHG*PMPGLL
Trigger: AAGCAGCCCCGGCATGGGGCACCCATGTACCGGTAC...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCCCCCTGTTCTAGCAGTGAGCCCACTGTGAAGAGGCAGGAGAAGAAATTGACCCCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: APCSSSEPTVKRQEKKLTPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...GGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGGCAAACAGGGCATCCTaGCAGTTTGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVANRAS*QFEVKL
Trigger: CAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGC...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTGCCTTCTTTCCCCGTTaGTTTAGACGGCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGAFFPR*FRRPRA
Trigger: CGCGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGC...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAAGCAGCTTCAGGGCCTaGCACATCGGGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGASSFRA*HIGVVS
Trigger: AGAGACCACCCCGATGTGGCAGGCCCTGAAGCTGCT...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCCGGTGATGTGGCTGTaGCCCCATAGCTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYPVMWL*PHSCGS
Trigger: TGACCCGCAGCTATGGGGCCACAGCCACATCACCGG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGRSTGT*VPHAGA
Trigger: AGCCCCGGCATGGGGCACCCATGTACCGGTACTCCT...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYRSTGT*VPHAGA
Trigger: AGCCCCGGCATGGGGCACCCATGTACCGGTACTCCT...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTCACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCTGCCACATCGGGGTaGTCTCTGCCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPATSG*SLPPLF
Trigger: GAACAGAGGCGGCAGAGACCACCCCGATGTGGCAGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
3UTR CAA 72 bp CTGGGTGGGGAAGCTGACGAACTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCACATTGGACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LGGEADELKSFV*APAAKHIGQAG
Trigger: GCCAGCCTGTCCAATGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAGTTCGTCAGCTTCCCCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVNLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTGGCATCCTGCCAGTTTaGGGTGAAGCTGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPGILPV*GEAVKS
Trigger: GCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCC...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp AGCTGGCCACATGCGGAGCAGATGGAGAGTAGCAGGGCATGGGCAGCAAACTCAGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SWPHAEQMESSRAWAANSGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...TGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTGGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKHCVAP*SGFPPV
Trigger: TACTGGAGGGAACCCGCTTCATGGGGCGACACAGTG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACACTGTGTCGCCCCATaGAGCGGGTTCCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEHCVAP*SGFPPV
Trigger: TACTGGAGGGAACCCGCTTCATGGGGCGACACAGTG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCCCGCGCGTAGACTCTaGGCAGGAGGGCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPPARRL*AGGQQR
Trigger: TCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTAGTTTCCCCGTTTTCTaGCAGGATGAAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACASFPVF*QDEGVS
Trigger: GGAGACACCTTCATCCTGTCAGAAAACGGGGAAACT...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR TCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTTTGTGGACAGGACATTaGGGCTCTGCATCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELLWTGH*GSASQA
Trigger: GGCTTGGGATGCAGAGCCTCAATGTCCTGTCCACAA...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR GCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACTACATGGGTGCCCCATaGCGGGGCTGCTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYYMGAP*RGCLQR
Trigger: TCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTA...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGGCCTTCTTTCCCCGTTaGTTTAGACGGCCCCGCGCG +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLAFFPR*FRRPRA
Trigger: CGCGCGGGGCCGTCTAAAGCAACGGGGAAAGAAGGC...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGGACATTGAGGCTCTaGATCCCAAGCCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVRTLRL*IPSRSS
Trigger: AGAGGAGCGGCTTGGGATGCAGAGCCTCAATGTCCT...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGGCTCACCCGGTGATGTaGCTGTGGCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLAHPVM*LWPHSC
Trigger: GCAGCTATGGGGCCACAGCCACATCACCGGGTGAGC...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATAGGAGTACCGGTACATaGGTGCCCCATGCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNRSTGT*VPHAGA
Trigger: AGCCCCGGCATGGGGCACCCATGTACCGGTACTCCT...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFLGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHLGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCAGGAGCATAGGAGGTaGTGGTGCTGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLQEHRR*WCWAGL
Trigger: GAGCCCTGCCCAGCACCACCACCTCCTATGCTCCTG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCCTGCCACATCGGGGTaGTCTCTGCCGCCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPPATSG*SLPPLF
Trigger: GAACAGAGGCGGCAGAGACCACCCCGATGTGGCAGG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGAAAGCGCTCACCCGGTaGTGTGGCTGTGGCCCCATA +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLKALTR*CGCGPI
Trigger: TATGGGGCCACAGCCACATCACCGGGTGAGCGCTTT...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: APSSPSWESSIGAYTACAGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGALWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCATGCCGGGGCTGCTTaGAGAGAACACAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPHAGAA*REHRRG
Trigger: GCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTGCAAACAGGGCATCCTaGCAGTTTGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFANRAS*QFEVKL
Trigger: CAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGC...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATAGCAGCTTCAGGGCCTaGCACATCGGGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNSSFRA*HIGVVS
Trigger: AGAGACCACCCCGATGTGGCAGGCCCTGAAGCTGCT...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTAGCAGCTTCAGGGCCTaGCACATCGGGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPSSFRA*HIGVVS
Trigger: AGAGACCACCCCGATGTGGCAGGCCCTGAAGCTGCT...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYRKNHS*VHDSGG
Trigger: CCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAERKNHS*VHDSGG
Trigger: CCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTGCACATTGGACAGGCTaGCAAAGGAGTACCGGTACA +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFAHWTG*QRSTGT
Trigger: TGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAGCACATTGGACAGGCTaGCAAAGGAGTACCGGTACA +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVAHWTG*QRSTGT
Trigger: TGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCACTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGALGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCCTCATCAGAGGCCTTaGGCTCATTGCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELPHQRP*AHCQTH
Trigger: GTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAAGGTAGTTCTTCCGCCTaGAGTACTGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEGSSSA*STAPGG
Trigger: ACCTCCTGGTGCAGTACTTCAGGCGGAAGAACTACC...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGGGTAGTTCTTCCGCCTaGAGTACTGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVGSSSA*STAPGG
Trigger: ACCTCCTGGTGCAGTACTTCAGGCGGAAGAACTACC...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp AGCTGGTCTGTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SWSVILRKHLHFALSASSNLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...GGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCACAGACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGNLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAAAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAENLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACAACCTGCCAGTAAGATaGGGCCTGAGAGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYNLPVR*GLRVWW
Trigger: CCACCACACTCTCAGGCCTCATCTTACTGGCAGGTT...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACACAGGAGAGGCCAGCCACAATCAGTGCCAGCACTCGGTTCATTAGCACCAGGCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: TQERPATISASTRFISTRPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...CCTGGTGCTAATGAACCGAGTGCTGGCACTGATTGTGGCTGGCCTCTCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393810.5
CDS-3UTR TCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAGGCATCCTGCCAGTTTaGGGTGAAGCTGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAGILPV*GEAVKS
Trigger: GCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCC...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCATCATCTGCACCGATaGCATCTTATAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVHHLHR*HLIGKQ
Trigger: CTGTTTGCCTATAAGATGTCATCGGTGCAGATGATG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCATCATCTGCACCGATaGCATCTTATAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLHHLHR*HLIGKQ
Trigger: CTGTTTGCCTATAAGATGTCATCGGTGCAGATGATG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGG +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELQWCKR*RAGHMR
Trigger: CCGCATGTGGCCAGCTCTTCATCTTTTACACCATTG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTGTCATCACTCTTTCCTaGAGCACACCCCAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFVITLS*STPQVR
Trigger: TCTGACTTGGGGTGTGCTGCAGGAAAGAGTGATGAC...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp AGCTGGTCTGTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SWSVILRKHLHFALSASSLWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...GGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCACAGACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYLWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACCCAGTGTTCGTAGCTaGGCCGAGACACAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEPSVRS*AETQAF
Trigger: GAAAGCTTGTGTCTCGGCGCAGCTACGAACACTGGG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLRKNHS*VHDSGG
Trigger: CCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNRKNHS*VHDSGG
Trigger: CCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAGCACATTGGACAGGCTaGCAAAGGAGTACCGGTACA +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAAHWTG*QRSTGT
Trigger: TGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCACATGCGGAGCAGATaGAGAGTAGCAGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLHMRSR*RVAGHG
Trigger: CCCATGCCCTGCTACTCTCCATCTGCTCCGCATGTG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTACCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SWESSIGAYTACAFLTRVPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGGTAGTTCTTCCGCCTaGAGTACTGCACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPGSSSA*STAPGG
Trigger: ACCTCCTGGTGCAGTACTTCAGGCGGAAGAACTACC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp AGCTGGTCTGTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCGGCATCCTGCCAGTTTaGGGTGAAGCTGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: SWSVILRKHLHFALSASSGILPV*GEAVKS
Trigger: GCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCC...GGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCACAGACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCTGTGGCCCCATAGCTaGGGGTCATCACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLLWPHS*GSSLFP
Trigger: AGGAAAGAGTGATGACCCGCAGCTATGGGGCCACAG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCAATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACAGGCCTTGGGCTCATTaGCAAACACACAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHRPWAH*QTHKLS
Trigger: TGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCT...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACGCACATTGGACAGGCTaGCAAAGGAGTACCGGTACA +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYAHWTG*QRSTGT
Trigger: TGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAAGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AGCTGGTCTGTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SWSVILRKHLHFALSASSESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...GGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCACAGACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp AAGTACCAAAACCTGCAACAGGCTCATGGAACAGAGCCTAGGGATCCAGGAGCATACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: KYQNLQQAHGTEPRDPGAYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...TGCTCCTGGATCCCTAGGCTCTGTTCCATGAGCCTGTTGCAGGTTTTGGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCTGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPSWESSIGAYTACAFLTCGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCTGGGAAAGCAGCATTaGAGCCTACACCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPLGKQH*SLHRLC
Trigger: GCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCCATCTTCACCCTCCTaGGAAAGCAGCATTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPPSSPS*ESSIGA
Trigger: GGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCCTCATCAGAGGCCTTaGGCTCATTGCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGPHQRP*AHCQTH
Trigger: GTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACCTCATCAGAGGCCTTaGGCTCATTGCCAAACACAC +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEPHQRP*AHCQTH
Trigger: GTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGGCATCCTGCCAGTTTaGGGTGAAGCTGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPGILPV*GEAVKS
Trigger: GCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGGCATCCTGCCAGTTTaGGGTGAAGCTGTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNGILPV*GEAVKS
Trigger: GCTTTTGACAGCTTCACCTCAAACTGGCAGGATGCC...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCATCATCTGCACCGATaGCATCTTATAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHHHLHR*HLIGKQ
Trigger: CTGTTTGCCTATAAGATGTCATCGGTGCAGATGATG...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGG +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEQWCKR*RAGHMR
Trigger: CCGCATGTGGCCAGCTCTTCATCTTTTACACCATTG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGG +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEQWCKR*RAGHMR
Trigger: CCGCATGTGGCCAGCTCTTCATCTTTTACACCATTG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGG +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGQWCKR*RAGHMR
Trigger: CCGCATGTGGCCAGCTCTTCATCTTTTACACCATTG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGISTRN*ESVKRS
Trigger: TGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAAT...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAAACAGGGCATCCTaGCAGTTTGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNANRAS*QFEVKL
Trigger: CAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGC...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGCAAACAGGGCATCCTaGCAGTTTGAGGTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPANRAS*QFEVKL
Trigger: CAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAAAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCACATTGGACAGGCTaGCAAAGGAGTACCGGTACA +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNAHWTG*QRSTGT
Trigger: TGTACCGGTACTCCTTTGCCAGCCTGTCCAATGTGC...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTGAGAGTAGCAGGGCATaGGCAGCAAACTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPESSRA*AANSLC
Trigger: ACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTC...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp AGCTGGTCTGTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SWSVILRKHLHFALSASSGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...GGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCACAGACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTGGCAGGAGAAGAAATTaGCCCCAAACATCATCTGCA +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGGRRRN*PQTSSA
Trigger: TGCAGATGATGTTTGGGGTCAATTTCTTCTCCTGCC...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGCAATGGTGTAAAAGATaGAGAGCTGGCCACATGCGG +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLQWCKR*RAGHMR
Trigger: CCGCATGTGGCCAGCTCTTCATCTTTTACACCATTG...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAACACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGCACCAGGGTAAGAAATaGAGGTATTTGCAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVHQGKK*RYLQRG
Trigger: TCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTG...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATAGCCTACACCGCTTGTaGTTTTCTCACCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNSLHRL*FSHQGK
Trigger: CTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCT...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTAGGCCTTGGGCTCATTaGCAAACACACAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VILRKHLHFALSASSLRGRPWAH*QTHKLS
Trigger: TGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCT...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR GCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAAAGGCCTTGGGCTCATTaGCAAACACACAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKRPWAH*QTHKLS
Trigger: TGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCT...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATTACAGCAGAAGGGGATaGTGGGAGGGTCCTATTTCA +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNYSRRG*WEGPIS
Trigger: TGAAATAGGACCCTCCCACCATCCCCTTCTGCTGTA...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCCCCTGCTGCAGAGCTaGTCTGTGATACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPPLLQS*SVILRK
Trigger: TTTTCTCAGTATCACAGACCAGCTCTGCAGCAGGGG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGCCTGCCAGTTTGAGGTaGAGCTGTCAAAAGCAATAT +
Preference number: 4 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVPASLR*SCQKQY
Trigger: ATATTGCTTTTGACAGCTTCACCTCAAACTGGCAGG...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACATCATCTGCACCGATaGCATCTTATAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKHHLHR*HLIGKQ
Trigger: CTGTTTGCCTATAAGATGTCATCGGTGCAGATGATG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCGTTTTCTGACAGGATaGAGGTGTCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TARARLKGTCGKSNWNLPRFLTG*RCLLAL
Trigger: CAAAGCAAGGAGACACCTTCATCCTGTCAGAAAACG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR CCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAATTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAATGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKCGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR TCA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCATCATCTGCACCGATaGCATCTTATAGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNHHLHR*HLIGKQ
Trigger: CTGTTTGCCTATAAGATGTCATCGGTGCAGATGATG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGTTAAGAGCTTCGTATTaGCACCAGCTGCTAAGCACA +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLLRASY*HQLLST
Trigger: TGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAA...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CCA 90 bp TGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGAGTCTGTGTGGGAAGAGTAACTaGAACCTACCTATGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CFSHQGKKCRYLQRGVSLCGKSN*NLPMLS
Trigger: AGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCACA...CAGACTCACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS GCA 90 bp CCAGCCACAATCAGTGCCAGCACTCGGTTCATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCACCCGGTGATGTGGCTGTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PATISASTRFISTRN*ESVKRSPGDVAVAP
Trigger: TGGGGCCACAGCCACATCACCGGGTGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAATGAACCGAGTGCTGGCACTGATTGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000495706.1
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: APSSPSWESSIGAYTACAPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...AGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ATGGAACAGAGCCTAGGGATCCAGGAGCATAGGAGGTGGTGGTGCTGGGCAGGGCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: MEQSLGIQEHRRWWCWAGPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...CCCTGCCCAGCACCACCACCTCCTATGCTCCTGGATCCCTAGGCTCTGTTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGCACTGCCCACCATCATaGCCATCTTGTGGACAGGAC +
Preference number: 5 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLHCPPS*PSCGQD
Trigger: GTCCTGTCCACAAGATGGCAATGATGGTGGGCAGTG...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR CAA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VILRKHLHFALSASSLRGPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp CACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: HSTIFTLLGKQHWSLHRLENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...CAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCCATGCCGGGGCTGCTaGCAGAGAACACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TARARLKGTCGKSNWNLPPCRGC*QRTQER
Trigger: CCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp CTTTCCTCAGCACAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LSSAQHHLHPPGKAALEPENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...AGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTGTGCTGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp CAGCACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QHHLHPPGKAALEPTPLVPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCGAGGCCTTGGGCTCATaGCCAAACACACAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SPSWESSIGAYTACAFLTEALGS*PNTQAF
Trigger: GAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTC...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp TCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCACCTCATCAGAGGCCTaGGGCTCATTGCCAAACACA +
Preference number: 5 (lower is better)
Translates to: SPSWESSIGAYTACAFLTTSSEA*GSLPNT
Trigger: TGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGT...GGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SWESSIGAYTACAFLTRVENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GTGGGAAGAGTAACTGGAACCTACCTATGCTCTCTTGACCCCAAACTCCCCAAACCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: VGRVTGTYLCSLDPKLPKPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...TTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGGTTCCAGTTACTCTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: TACAFLTRVRNAGICRGEPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp TTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACACCTCATCAGAGGCCTaGGGCTCATTGCCAAACACA +
Preference number: 5 (lower is better)
Translates to: FTLLGKQHWSLHRLCFSHTSSEA*GSLPNT
Trigger: TGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGT...GTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp TCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTACTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: SWESSIGAYTACAFLTRVLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...TACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GGAGTGAGTCTGGAAGGTGGCAGAGCACAGCTAGGGCAAGACTTAAGGGAACTTCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: GVSLEGGRAQLGQDLRELLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...AAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCCACCTTCCAGACTCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ACCATCTTCACCCTCCTGGGAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTCCTACCTATGCTCTCTaGACCCCAAACTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: TIFTLLGKQHWSLHRLCFPTYAL*TPNSPK
Trigger: TTTTGGGGAGTTTGGGGTCAAGAGAGCATAGGTAGG...AAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGGAGGGTGAAGATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GAAAGCAGCATTGGAGCCTACACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATCCTGGGAAAGCAGCATaGGAGCCTACACCGCTTGTG +
Preference number: 5 (lower is better)
Translates to: ESSIGAYTACAFLTRVRNPGKAA*EPTPLV
Trigger: CACAAGCGGTGTAGGCTCCAATGCTGCTTTCCCAGG...ATTTCTTACCCTGGTGAGAAAAGCACAAGCGGTGTAGGCTCCAATGCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCTTGTGGACAGGACATaGAGGCTCTGCATCCCAAGC +
Preference number: 5 (lower is better)
Translates to: VILRKHLHFALSASSLRGLVDRT*RLCIPS
Trigger: GCTTGGGATGCAGAGCCTCAATGTCCTGTCCACAAG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS-3UTR CAA 90 bp CGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGTGGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: RLCFSHQGKKCRYLQRGVENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...CACTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACGAAAACACCTGCATTTaGCCCTTTCAGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYENTCI*PFQPAP
Trigger: GGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ACCGCTTGTGCTTTTCTCACCAGGGTAAGAAATGCAGGTATTTGCAGAGGGGAGGAGGCCTTGGGCTCATaGCCAAACACACAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TACAFLTRVRNAGICRGEEALGS*PNTQAF
Trigger: GAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTC...CTCCCCTCTGCAAATACCTGCATTTCTTACCCTGGTGAGAAAAGCACAAGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTTACAGCAGAAGAGGCCTTGGGCTCATaGCCAAACACACAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: ENTCILPFQPAPSEVTAEEALGS*PNTQAF
Trigger: GAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTC...TTCTGCTGTAACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393812.4
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GCACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: AQLGQDLRELVGRVTGTYLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...GTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp GTGATACTGAGAAAACACCTGCATTTTGCCCTTTCAGCCAGCTCCCTCAGAGGTCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: VILRKHLHFALSASSLRGLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...ACCTCTGAGGGAGCTGGCTGAAAGGGCAAAATGCAGGTGTTTTCTCAGTATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS-3UTR CAA 90 bp ACAGCTAGGGCAAGACTTAAGGGAACTTGTGGGAAGAGTAACTGGAACCTACCTCTTAAGAGCTTCGTATaGGCACCAGCTGCTAAGCAC +
Preference number: 5 (lower is better)
Translates to: TARARLKGTCGKSNWNLPLKSFV*APAAKH
Trigger: GTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAG...AGGTAGGTTCCAGTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS GCA 72 bp CGCAGCTCCCATCCCCGCTGGCTCCGGGCAGCGATATaGTGGCCGACGGCCGAGCAGCCGGGACCCCACCCG +
Preference number: 6 (lower is better)
Translates to: RSSHPRWLRAAI*WPTAEQPGPHP
Trigger: CGGGTGGGGTCCCGGCTGCTCGGCCGTCGGCCAGCATATCGCTGCCCGGAGCCAGCGGGGATGGGAGCTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619636.4
CDS CCA 72 bp AGCTCCCATCCCCGCTGGCTCCGGGCAGCGATATGCTaGCCGACGGCCGAGCAGCCGGGACCCCACCCGGCC +
Preference number: 6 (lower is better)
Translates to: SSHPRWLRAAIC*PTAEQPGPHPA
Trigger: GGCCGGGTGGGGTCCCGGCTGCTCGGCCGTCGGCCAGCATATCGCTGCCCGGAGCCAGCGGGGATGGGAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619636.4
CDS GCA 72 bp TGGAGCCCTGTGGCACAGAAGAGCAGCTTCAGGGCCTaGCACATCGGGGTGGTCTCTGCCGCCTCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: WSPVAQKSSFRA*HIGVVSAASVR
Trigger: CCGAACAGAGGCGGCAGAGACCACCCCGATGTGGCAGGCCCTGAAGCTGCTCTTCTGTGCCACAGGGCTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393812.4
ENST00000495706.1
ENST00000615337.4
ENST00000619636.4
CDS TCA 72 bp CACCAGGAACTGCGAGTCCGTAAAGCGCTCACCCGGTaGTGTGGCTGTGGCCCCATAGCTGCGGGTCATCAC +
Preference number: 6 (lower is better)
Translates to: HQELRVRKALTR*CGCGPIAAGHH
Trigger: GTGATGACCCGCAGCTATGGGGCCACAGCCACATCACCGGGTGAGCGCTTTACGGACTCGCAGTTCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000495706.1
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS CCA 72 bp CTGTTCGGGGCGCCAGGGGAACCTCATCAGAGGCCTTaGGCTCATTGCCAAACACACAAGCTTTCACCAGGG +
Preference number: 6 (lower is better)
Translates to: LFGAPGEPHQRP*AHCQTHKLSPG
Trigger: CCCTGGTGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGTTCCCCTGGCGCCCCGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393812.4
ENST00000495706.1
ENST00000615337.4
ENST00000619636.4
CDS CCA 72 bp CCAGCAGCATTCACCACAAATCGGAAGAACCATAGCTaGGTCCATGACTCCGGAGGGGCTTCGGGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: PAAFTTNRKNHS*VHDSGGASGVS
Trigger: GGAGACTCCCGAAGCCCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCGATTTGTGGTGAATGCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS CAA 72 bp GGCGCCAGGGGAACCTCATCAGAGGCCTTGGGCTCATaGCCAAACACACAAGCTTTCACCAGGGGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: GARGTSSEALGS*PNTQAFTRGKQ
Trigger: CTGCTTTCCCCTGGTGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGTTCCCCTGGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393812.4
ENST00000495706.1
ENST00000615337.4
ENST00000619636.4
CDS CAA 72 bp TCTGTTCGGGGCGCCAGGGGAACCTCATCAGAGGCCTaGGGCTCATTGCCAAACACACAAGCTTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: SVRGARGTSSEA*GSLPNTQAFTR
Trigger: CCTGGTGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGTTCCCCTGGCGCCCCGAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393812.4
ENST00000495706.1
ENST00000615337.4
ENST00000619636.4
CDS CAA 90 bp AGCACCACCACTGCCCACCATCATTGCCATCTTGTGGACAGGACATaGAGGCTCTGCATCCCAAGCCGCTCCTCTGTGTTAGTTTCCCCG +
Preference number: 6 (lower is better)
Translates to: STTTAHHHCHLVDRT*RLCIPSRSSVLVSP
Trigger: CGGGGAAACTAACACAGAGGAGCGGCTTGGGATGCAGAGCCTCAATGTCCTGTCCACAAGATGGCAATGATGGTGGGCAGTGGTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615337.4
CDS GCA 72 bp ATCAGTGCCAGCACTCGGTTCATTAGCACCAGGAACTaGGAGTCCGTAAAGCGCTCACCCGGTGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: ISASTRFISTRN*ESVKRSPGDVA
Trigger: AGCCACATCACCGGGTGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAATGAACCGAGTGCTGGCACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393810.5
ENST00000393812.4
ENST00000495706.1
ENST00000537814.2
ENST00000538577.5
ENST00000615337.4
ENST00000619636.4
CDS GCA 72 bp GCGCCAGGGGAACCTCATCAGAGGCCTTGGGCTCATTaGCAAACACACAAGCTTTCACCAGGGGAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: APGEPHQRPWAH*QTHKLSPGESR
Trigger: TCTGCTTTCCCCTGGTGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGTTCCCCTGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393812.4
ENST00000495706.1
ENST00000615337.4
ENST00000619636.4
CDS CAA 72 bp ACTGCCCACCATCATTGCCATCTTGTGGACAGGACATaGAGGCTCTGCATCCCAAGCCGCTCCTCTGTGTTA +
Preference number: 6 (lower is better)
Translates to: TAHHHCHLVDRT*RLCIPSRSSVL
Trigger: TAACACAGAGGAGCGGCTTGGGATGCAGAGCCTCAATGTCCTGTCCACAAGATGGCAATGATGGTGGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615337.4