RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC35A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000176087

Ensembl transcript IDs: ENST00000323146.8, ENST00000514199.1, ENST00000612662.2, ENST00000623481.3

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGGGAGGGGGATCTGGTaGTGGCGCCCAATCTACAGG +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCGRGIW*WRPIYR
Trigger: CCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGGGAGGAAGGCCTaGGAGGGGGATCTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCRGRKA*EGDLVV
Trigger: CACCACCAGATCCCCCTCCCAGGCCTTCCTCCCTCT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCAGACAGCCCTCAGGGTaGACAGAGAGGTCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPRQPSG*TERSGV
Trigger: CACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGGGGGATCTGGTGGTaGCGCCCAATCTACAGGGTC +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCRGIWW*RPIYRV
Trigger: GACCCTGTAGATTGGGCGCCACCACCAGATCCCCCT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGGGAGGGGGATCTGGTaGTGGCGCCCAATCTACAGG +
Preference number: 2 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLGRGIW*WRPIYR
Trigger: CCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCVMHHG*AGLASS
Trigger: GGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGAC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGACAGCCCTCAGGGTaGACAGAGAGGTCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCRQPSG*TERSGV
Trigger: CACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR GCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTA +
Preference number: 2 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPDKAGS*PTRMGL
Trigger: TAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCTGGGCCTTCTTGCATaGAAGTGGAAGGGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCLGLLA*KWKGED
Trigger: ATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCTCCAGTGGCTCTGCTaGGTGACTAAAGTAGGCAAG +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCLQWLC*VTKVGK
Trigger: CTTGCCTACTTTAGTCACCCAGCAGAGCCACTGGAG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGGTGAGGATCCCTTATaGAAGAGTCATGCACCATGG +
Preference number: 2 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPGEDPL*KSHAPW
Trigger: CCATGGTGCATGACTCTTCCATAAGGGATCCTCACC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGGGGGATCTGGTGGTaGCGCCCAATCTACAGGGTC +
Preference number: 2 (lower is better)
Translates to: SGLGNGCIICGNWAFLHERGIWW*RPIYRV
Trigger: GACCCTGTAGATTGGGCGCCACCACCAGATCCCCCT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGCTGCCCAACAAGGATaGGGTTATTTCTCAGGCCTA +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCAAQQG*GYFSGL
Trigger: TAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEVMHHG*AGLASS
Trigger: GGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGAC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGGTGAGGATCCCTTATaGAAGAGTCATGCACCATGG +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCGEDPL*KSHAPW
Trigger: CCATGGTGCATGACTCTTCCATAAGGGATCCTCACC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTA +
Preference number: 2 (lower is better)
Translates to: CIICGNWAFLHESGRVRIDKAGS*PTRMGL
Trigger: TAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCCTCCAGTGGCTCTGCTaGGTGACTAAAGTAGGCAAG +
Preference number: 2 (lower is better)
Translates to: CIICGNWAFLHESGRVRILQWLC*VTKVGK
Trigger: CTTGCCTACTTTAGTCACCCAGCAGAGCCACTGGAG...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCACTAGCCAGCTCCAGTaGCTCTGCTGGGTGACTAAA +
Preference number: 2 (lower is better)
Translates to: CIICGNWAFLHESGRVRITSQLQ*LCWVTK
Trigger: TTTAGTCACCCAGCAGAGCCACTGGAGCTGGCTAGT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGT +
Preference number: 2 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPIICGN*AFLHES
Trigger: ACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTAT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR GCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTA +
Preference number: 2 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEDKAGS*PTRMGL
Trigger: TAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGAACTTGGTTGGGGGTaGGGGATGGTAAGCATTTCC +
Preference number: 2 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEELGWG*GMVSIS
Trigger: GGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAACTAGCCAGCTCCAGTaGCTCTGCTGGGTGACTAAA +
Preference number: 2 (lower is better)
Translates to: SGLGNGCIICGNWAFLHETSQLQ*LCWVTK
Trigger: TTTAGTCACCCAGCAGAGCCACTGGAGCTGGCTAGT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGT +
Preference number: 2 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCIICGN*AFLHES
Trigger: ACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTAT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR CCA 72 bp ACTGCTAGGCAGGGGCAGGCCCCAGAGTGGGAAGCATaGTACCTCCTAGGAGCCTCAGAGTGGGTAGCGGGC +
Preference number: 3 (lower is better)
Translates to: TARQGQAPEWEA*YLLGASEWVAG
Trigger: GCCCGCTACCCACTCTGAGGCTCCTAGGAGGTACCATGCTTCCCACTCTGGGGCCTGCCCCTGCCTAGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR CCA 72 bp GTGAGGATCCCTTATGGAAGAGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCCAGTGGCTCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: VRIPYGRVMHHG*AGLASSSGSAG
Trigger: CCCAGCAGAGCCACTGGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGACTCTTCCATAAGGGATCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR TCA 72 bp CTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTaGGCTGCTCATCCTGCCTCTTCCATGGCACCTAGA +
Preference number: 3 (lower is better)
Translates to: LGNPDKVSPPEG*AAHPASSMAPR
Trigger: TCTAGGTGCCATGGAAGAGGCAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
3UTR-3UTR CAA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCTCTGGAAGAACTTGGTaGGGGGTGGGGGATGGTAAG +
Preference number: 3 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCSGRTW*GVGDGK
Trigger: CTTACCATCCCCCACCCCCAACCAAGTTCTTCCAGA...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR TCA 72 bp GTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTaGGGATCCCTTATGGAAGAGTCATGCACCATGGCT +
Preference number: 3 (lower is better)
Translates to: VATGPSCMKVEG*GSLMEESCTMA
Trigger: AGCCATGGTGCATGACTCTTCCATAAGGGATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR GCA 72 bp TTGTTGCCCACACCCCACTTTCATCAACTCTGTTCATaGAGGACAAAGCAGGGAGCTGCCCAACAAGGATGG +
Preference number: 3 (lower is better)
Translates to: LLPTPHFHQLCS*RTKQGAAQQGW
Trigger: CCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCTGCATGAACAGAGTTGATGAAAGTGGGGTGTGGGCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CAA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCTCTGGAAGAACTTGGTaGGGGGTGGGGGATGGTAAG +
Preference number: 3 (lower is better)
Translates to: CIICGNWAFLHESGRVRISGRTW*GVGDGK
Trigger: CTTACCATCCCCCACCCCCAACCAAGTTCTTCCAGA...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR GCA 72 bp TCATCAACTCTGTTCATGCAGGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTATTTCTCAGGCCTAGG +
Preference number: 3 (lower is better)
Translates to: SSTLFMQDKAGS*PTRMGLFLRPR
Trigger: CCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCTGCATGAACAGAGTTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR-3UTR CAA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAATCTGGAAGAACTTGGTaGGGGGTGGGGGATGGTAAG +
Preference number: 3 (lower is better)
Translates to: SGLGNGCIICGNWAFLHESGRTW*GVGDGK
Trigger: CTTACCATCCCCCACCCCCAACCAAGTTCTTCCAGA...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR TCA 72 bp TGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATaGAAGTGGAAGGGTGAGGATCCCTTATGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: WLYNLWQLGLLA*KWKGEDPLWKS
Trigger: ACTCTTCCATAAGGGATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
3UTR CCA 72 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATC +
Preference number: 3 (lower is better)
Translates to: SGLGNGCIICGN*AFLHESGRVRI
Trigger: GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGGGGACGGCCCAGGCCTaGCATACCCCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWGTAQA*HTPILY
Trigger: GTAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCC...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGCCAGGAGGGGACATCTaGGGGATCCACGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWPGGDI*GIHGSS
Trigger: GGAGGAGCCGTGGATCCCCCAGATGTCCCCTCCTGG...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGAGTCAGCAGCACGGCTaGGGAGGGCCGGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGSQQHG*GGPEGH
Trigger: GTGCCCTTCCGGCCCTCCTCAGCCGTGCTGCTGACT...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGTTGAAGGCCCCCTGCTaGATAGCAGGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWLKAPC*IAGSRS
Trigger: GCTGCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAA...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAGGGGGATCTGGTGGTaGCGCCCAATCTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWRGIWW*RPIYRV
Trigger: GACCCTGTAGATTGGGCGCCACCACCAGATCCCCCT...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWVMHHG*AGLASS
Trigger: GGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGAC...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGGGCCCACTCCACTGTTaGCTTCGTCTTCTACACGCC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWGPLHC*LRLLHA
Trigger: GGCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCC...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGCCTGAGCCGCATAGATaGCAGTGCAGGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGPEPHR*QCRCPQ
Trigger: CTGTGGGCACCTGCACTGGCATCTATGCGGCTCAGG...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGGGTCCAGCGGGCCTaGCTGGGACGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCRVQRA*LGRPRP
Trigger: AGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGCAGCTCCAGTGGCTCTaGTGGGTGACTAAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWQLQWL*WVTKVG
Trigger: GCCTACTTTAGTCACCCAGCAGAGCCACTGGAGCTG...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCCCCGCCTCCCTCGTaGCGACTGCCCCGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSPPPS*RLPRPS
Trigger: AGATGGCCGGGGCAGTCGGCACGAGGGAGGCGGGGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGGGCCCACTCCACTGTTaGCTTCGTCTTCTACACGCC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGGPLHC*LRLLHA
Trigger: GGCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCC...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGGCCGCTGTCGCTTCATaGGCAGCTCTGTGTACACTG +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGAAVAS*AALCTL
Trigger: CAGTGTACACAGAGCTGCTCATGAAGCGACAGCGGC...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGGTCTCAGGCTGCGTGTaGGCGCACTCACGACCGGGG +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILVSGCV*AHSRPG
Trigger: CCCCGGTCGTGAGTGCGCTCACACGCAGCCTGAGAC...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGCCGCATAGATGCCAGTaGAGGTGCCCACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGPHRCQ*RCPQQS
Trigger: GCTTTGCTGTGGGCACCTGCACTGGCATCTATGCGG...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTAGGGTCCAGCGGGCCTaGCTGGGACGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLRVQRA*LGRPRP
Trigger: AGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTA +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWDKAGS*PTRMGL
Trigger: TAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTC...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCACTCGTGCGCGAGTaGGCGCGGCGCATGTTCGGC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSLVRE*ARRMFG
Trigger: GCCGAACATGCGCCGCGCGCACTCGCGCACGAGTGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGCCCCGCCGAACTTGTTaGGCAGGCGCATCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILPRRTC*AGASPP
Trigger: AGGCGGGGATGCGCCTGCGCAACAAGTTCGGCGGGG...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGCATGGGCACCGTACATaGCAGTGGATAGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWHGHRT*QWIGVA
Trigger: TGCTACTCCTATCCACTGCCATGTACGGTGCCCATG...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGCTCCAGTGGCTCTGCTaGGTGACTAAAGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWLQWLC*VTKVGK
Trigger: CTTGCCTACTTTAGTCACCCAGCAGAGCCACTGGAG...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGCTACATTCCCTGAGATaGGTCAAGCCCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGLHSLR*VKPSPL
Trigger: GAGAGGGCTGGGCTTGACTCATCTCAGGGAATGTAG...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGACGACCGGGGCGCGATaGTCTCACTCGTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILTTGAR*SHSCAS
Trigger: ACTCGCGCACGAGTGAGATCATCGCGCCCCGGTCGT...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTACCTTCCAGGAGGCCTaGGCCAGAGCCGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLTFQEA*ARAAAS
Trigger: GCTGGCGGCGGCTCTGGCCCAGGCCTCCTGGAAGGT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAACCTTCCAGGAGGCCTaGGCCAGAGCCGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSTFQEA*ARAAAS
Trigger: GCTGGCGGCGGCTCTGGCCCAGGCCTCCTGGAAGGT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGCCAGAGTGGGAAGCATaGTACCTCCTAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGPEWEA*YLLGAS
Trigger: TGAGGCTCCTAGGAGGTACCATGCTTCCCACTCTGG...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGTCGGGAGCTAGGGAATaGGGTAAAGTGAGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWSGARE*GKVRSV
Trigger: AACACTCCTCACTTTACCCCATTCCCTAGCTCCCGA...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTTTCGCTGGCGTTCGTaGGCCTCCCCCGGACCCACA +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILFRWRS*ASPGPT
Trigger: TGTGGGTCCGGGGGAGGCCCACGAACGCCAGCGAAA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTGTCAGCGGTTTCGCTaGCGTTCGTGGGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILCQRFR*RSWASP
Trigger: GGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAGTCAGCAGCACGGCTaGGGAGGGCCGGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSSQQHG*GGPEGH
Trigger: GTGCCCTTCCGGCCCTCCTCAGCCGTGCTGCTGACT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGGAAGAAGGCGGCTGTaGGCTGCAGCCGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPGRRRL*AAAVAG
Trigger: TCCTGCTACGGCTGCAGCTCACAGCCGCCTTCTTCC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGAGATGCCAGTGCAGGTaGCCACAGCAAAGCCCAATA +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGRCQCR*PQQSPI
Trigger: TATTGGGCTTTGCTGTGGGCACCTGCACTGGCATCT...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCCCTGGGGCCATGCTTaGCAGCCTACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGPWGHA*QPTRRE
Trigger: CTCCCTTCTGGTAGGCTGGCAAGCATGGCCCCAGGG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGCTCCCTCGTGCCGACTaGCCCGGCCATCTTTACGGA +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILLPRAD*PGHLYG
Trigger: TCCGTAAAGATGGCCGGGGCAGTCGGCACGAGGGAG...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTAGAGGGAGGAAGGCCTaGGAGGGGGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGRGRKA*EGDLVV
Trigger: CACCACCAGATCCCCCTCCCAGGCCTTCCTCCCTCT...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGTGCCAGAGAGAATACTaGGGATCAGAGGCATCTACC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGCQREY*GSEAST
Trigger: GGTAGATGCCTCTGATCCTCAGTATTCTCTCTGGCA...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGGAAGAAGGCGGCTGTaGGCTGCAGCCGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCGRRRL*AAAVAG
Trigger: TCCTGCTACGGCTGCAGCTCACAGCCGCCTTCTTCC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGGACATCCTCACTCCTaGGCCGCTCCAGAGTCGCTT +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPGHPHS*AAPESL
Trigger: AAGCGACTCTGGAGCGGCTCAGGAGTGAGGATGTCC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGCCTATAAAAGCTTCCTaGGATGGCAGTGGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWPIKAS*DGSGKE
Trigger: TTCTTTGCCACTGCCATCTCAGGAAGCTTTTATAGG...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCCTGAGCCGCATAGATaGCAGTGCAGGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGPEPHR*QCRCPQ
Trigger: CTGTGGGCACCTGCACTGGCATCTATGCGGCTCAGG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGCCTGAGCCGCATAGATaGCAGTGCAGGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILPEPHR*QCRCPQ
Trigger: CTGTGGGCACCTGCACTGGCATCTATGCGGCTCAGG...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGGGCCCCTGGGGCCATaGTTGCCAGCCTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSGPLGP*LPAYQK
Trigger: CTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGGCCC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGGGCCCCTGGGGCCATaGTTGCCAGCCTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLGPLGP*LPAYQK
Trigger: CTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGGCCC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCTTGAAGGCCCCCTGCTaGATAGCAGGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCLKAPC*IAGSRS
Trigger: GCTGCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAA...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGCCAGCAATGGGGCATaGGCACCGTACATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGASNGA*APYMAV
Trigger: CACTGCCATGTACGGTGCCCATGCCCCATTGCTGGC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCAGGGGGATCTGGTGGTaGCGCCCAATCTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPRGIWW*RPIYRV
Trigger: GACCCTGTAGATTGGGCGCCACCACCAGATCCCCCT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPVMHHG*AGLASS
Trigger: GGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGAC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGAATTCCATCAGAAGCTaGGAATTGGGAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGNSIRS*ELGGDG
Trigger: CCCATCCCCTCCCAATTCCCAGCTTCTGATGGAATT...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGGGCCCACTCCACTGTTaGCTTCGTCTTCTACACGCC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILGPLHC*LRLLHA
Trigger: GGCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCC...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAGCAGCGCTAACCCCTaGCGCACAGAGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRISSANP*RTERRC
Trigger: GCACCGCCTCTCTGTGCGTCAGGGGTTAGCGCTGCT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGCATGGCCAGGCCAATaGGCAATGTGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGAWPGQ*AMWPGR
Trigger: TCTTCCTGGCCACATTGCTCATTGGCCTGGCCATGC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTAGACAGCCCTCAGGGTaGACAGAGAGGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGRQPSG*TERSGV
Trigger: CACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCT...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCTAGTAACGGGTTCGTaGTGGTTCCCAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGLVTGS*WFPGGD
Trigger: GTCCCCTCCTGGGAACCATCACGAACCCGTTACTAG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCAGATACTTCCACGTaGCCCCCTCCCGTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSDTST*PPPVES
Trigger: AGACTCGACGGGAGGGGGTCACGTGGAAGTATCTGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCCGCATAGATGCCAGTaGAGGTGCCCACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGPHRCQ*RCPQQS
Trigger: GCTTTGCTGTGGGCACCTGCACTGGCATCTATGCGG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGCCGCATAGATGCCAGTaGAGGTGCCCACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILPHRCQ*RCPQQS
Trigger: GCTTTGCTGTGGGCACCTGCACTGGCATCTATGCGG...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCCTGAGCCGCATAGATaGCAGTGCAGGTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCPEPHR*QCRCPQ
Trigger: CTGTGGGCACCTGCACTGGCATCTATGCGGCTCAGG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCCCTGGGGCCATGCTTaGCAGCCTACCAGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLPWGHA*QPTRRE
Trigger: CTCCCTTCTGGTAGGCTGGCAAGCATGGCCCCAGGG...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGGGCCCCTGGGGCCATaGTTGCCAGCCTACCAGAAG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIGPLGP*LPAYQK
Trigger: CTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGGCCC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTTTGAAGGCCCCCTGCTaGATAGCAGGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLLKAPC*IAGSRS
Trigger: GCTGCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAA...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGAAGAGGTTCTGAAGTaGCAGGGGCAGCCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCEEVLK*QGQPLS
Trigger: CGACAGCGGCTGCCCCTGGCACTTCAGAACCTCTTC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAGAGGGAGGAAGGCCTaGGAGGGGGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSRGRKA*EGDLVV
Trigger: CACCACCAGATCCCCCTCCCAGGCCTTCCTCCCTCT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCTCTCCACCTGAAGGCTaGGCTGCTCATCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCSPPEG*AAHPAS
Trigger: AGAGGCAGGATGAGCAGCTCAGCCTTCAGGTGGAGA...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGCCGCTGTCGCTTCATaGGCAGCTCTGTGTACACTG +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCAAVAS*AALCTL
Trigger: CAGTGTACACAGAGCTGCTCATGAAGCGACAGCGGC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCCTGGCTCCAGCAGTCTaGCTAAGCCCCACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRILAPAV*LSPTPC
Trigger: GCAAGGGGTGGGGCTTAGTCAGACTGCTGGAGCCAG...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCTCTTCTACACGCCGCTaGAGGCTTTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPSSTRR*RLSSWF
Trigger: GAACCAGCTGGAAAGCCTGCAGCGGCGTGTAGAAGA...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCTTCTACACGCCGCTaGAGGCTTTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSSTRR*RLSSWF
Trigger: GAACCAGCTGGAAAGCCTGCAGCGGCGTGTAGAAGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGTTGGGCACAGCATATaGCTGAGCCGCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGVGHSI*LSRIDA
Trigger: GGCATCTATGCGGCTCAGGCATATGCTGTGCCCAAC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGGTTGGGCACAGCATATaGCTGAGCCGCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILVGHSI*LSRIDA
Trigger: GGCATCTATGCGGCTCAGGCATATGCTGTGCCCAAC...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAACTTGAAGGCCCCCTaGTGCATAGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSNLKAP*CIAGSR
Trigger: GCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAAGTT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTAACTTGAAGGCCCCCTaGTGCATAGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLNLKAP*CIAGSR
Trigger: GCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAAGTT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGAAGAGGTTCTGAAGTaGCAGGGGCAGCCGCTGTCG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSEEVLK*QGQPLS
Trigger: CGACAGCGGCTGCCCCTGGCACTTCAGAACCTCTTC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCAGCTCCAGTGGCTCTaGTGGGTGACTAAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGQLQWL*WVTKVG
Trigger: GCCTACTTTAGTCACCCAGCAGAGCCACTGGAGCTG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCCAGCTCCAGTGGCTCTaGTGGGTGACTAAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPQLQWL*WVTKVG
Trigger: GCCTACTTTAGTCACCCAGCAGAGCCACTGGAGCTG...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCTCCCGCCTCGCCGAATaGTCTCCCCACACCACTCCA +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRISRLAE*SPHTTP
Trigger: TGGAGTGGTGTGGGGAGAGCATTCGGCGAGGCGGGA...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGAACAGCGAGCCATCCTaGCCCACTCCACTGTTGACT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILNSEPS*PTPLLT
Trigger: AGTCAACAGTGGAGTGGGCCAGGATGGCTCGCTGTT...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCATCCTGCCTCTTCCATaGCACCTAGAGCTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPILPLP*HLELVG
Trigger: CCCGACTAGCTCTAGGTGCCATGGAAGAGGCAGGAT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGATCCTGCCTCTTCCATaGCACCTAGAGCTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILILPLP*HLELVG
Trigger: CCCGACTAGCTCTAGGTGCCATGGAAGAGGCAGGAT...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGCCAGCAATGGGGCATaGGCACCGTACATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSASNGA*APYMAV
Trigger: CACTGCCATGTACGGTGCCCATGCCCCATTGCTGGC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGGTCCGGAATCAGGGTaGAAGTTGTCAGGGACTAGC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGGPESG*KLSGTS
Trigger: GCTAGTCCCTGACAACTTCCACCCTGATTCCGGACC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGGGAGGGGGATCTGGTaGTGGCGCCCAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIGRGIW*WRPIYR
Trigger: CCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAGAGGGAGGAAGGCCTaGGAGGGGGATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIRGRKA*EGDLVV
Trigger: CACCACCAGATCCCCCTCCCAGGCCTTCCTCCCTCT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGTCATGCACCATGGCTaGGCTGGACTAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLVMHHG*AGLASS
Trigger: GGAGCTGGCTAGTCCAGCCCAGCCATGGTGCATGAC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGTGGTTGTATAATCTGTaGCAACTGGGCCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGWLYNL*QLGLLA
Trigger: TGCAAGAAGGCCCAGTTGCCACAGATTATACAACCA...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCCAGAGTGGGAAGCATaGTACCTCCTAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGPEWEA*YLLGAS
Trigger: TGAGGCTCCTAGGAGGTACCATGCTTCCCACTCTGG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTTCATAGTTGGGCGGTaGTGTCAGCGGTTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILFIVGR*CQRFRW
Trigger: CCAGCGAAACCGCTGACACCACCGCCCAACTATGAA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGCAGCGCTAACCCCTaGCGCACAGAGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHESSANP*RTERRC
Trigger: GCACCGCCTCTCTGTGCGTCAGGGGTTAGCGCTGCT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGCATGGCCAGGCCAATaGGCAATGTGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSAWPGQ*AMWPGR
Trigger: TCTTCCTGGCCACATTGCTCATTGGCCTGGCCATGC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCCTGGGCCTTCTTGCATaGAAGTGGAAGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPLGLLA*KWKGED
Trigger: ATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAG...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCTACATTCCCTGAGATaGGTCAAGCCCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCLHSLR*VKPSPL
Trigger: GAGAGGGCTGGGCTTGACTCATCTCAGGGAATGTAG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTAGGGGCTACATTCCCTaGGATGAGTCAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLRGYIP*DESSPA
Trigger: GGCTGGGCTTGACTCATCTCAGGGAATGTAGCCCCT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAGACAGCCCTCAGGGTaGACAGAGAGGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSRQPSG*TERSGV
Trigger: CACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGCTGACAGATGGGATCTaGACCAGTAACTTACATCAA +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGLTDGI*TSNLHQ
Trigger: TTGATGTAAGTTACTGGTTCAGATCCCATCTGTCAG...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCTCTTCTACACGCCGCTaGAGGCTTTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCSSTRR*RLSSWF
Trigger: GAACCAGCTGGAAAGCCTGCAGCGGCGTGTAGAAGA...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGGCTAGTCGGGCCCCTTaGGTAGCAACTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILASRAP*VATANS
Trigger: ACTATTTGCAGTTGCTACGCAAGGGGCCCGACTAGC...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAACTTGAAGGCCCCCTaGTGCATAGCAGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRINLKAP*CIAGSR
Trigger: GCGGGAGCCTGCTATGCAGCAGGGGGCCTTCAAGTT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGAGCCGCCGCCAGCATaGAGACCTAGATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLEPPPA*RPRFRS
Trigger: GCTTCTGAATCTAGGTCTGCATGCTGGCGGCGGCTC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGAGCCGCCGCCAGCATaGAGACCTAGATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSEPPPA*RPRFRS
Trigger: GCTTCTGAATCTAGGTCTGCATGCTGGCGGCGGCTC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCATCAGGGACTAGCGGCTaGCATAGTACAGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSSGTSG*HSTGAW
Trigger: CCATGCGCCTGTACTATGGCAGCCGCTAGTCCCTGA...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGACAAAGCAGGGAGCTaGCCAACAAGGATGGGGTTA +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGDKAGS*PTRMGL
Trigger: TAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAACACAAGACCCTGGGTaGCTAAGGGGCAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSTQDPG*LRGSRD
Trigger: ATCCCTGCTGCCCCTTAGCCACCCAGGGTCTTGTGT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGGGACGGCCCAGGCCTaGCATACCCCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEGTAQA*HTPILY
Trigger: GTAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGCCAGCAATGGGGCATaGGCACCGTACATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIASNGA*APYMAV
Trigger: CACTGCCATGTACGGTGCCCATGCCCCATTGCTGGC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAGGGGGATCTGGTGGTaGCGCCCAATCTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIRGIWW*RPIYRV
Trigger: GACCCTGTAGATTGGGCGCCACCACCAGATCCCCCT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCACTAGCCAGCTCCAGTaGCTCTGCTGGGTGACTAAA +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPTSQLQ*LCWVTK
Trigger: TTTAGTCACCCAGCAGAGCCACTGGAGCTGGCTAGT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCCAGAGTGGGAAGCATaGTACCTCCTAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCPEWEA*YLLGAS
Trigger: TGAGGCTCCTAGGAGGTACCATGCTTCCCACTCTGG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCAGGTTTCCTGTACCTaGTCTCAGGTCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGQVSCT*SQVTLC
Trigger: GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGTATTGTCTTGGTTCCTaGATGGGCTTTACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGYCLGS*MGFTSF
Trigger: GAAAGAGGTAAAGCCCATCCAGGAACCAAGACAATA...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGGCCCACTCCACTGTTaGCTTCGTCTTCTACACGCC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIGPLHC*LRLLHA
Trigger: GGCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTGCCAGAGAGAATACTaGGGATCAGAGGCATCTACC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILCQREY*GSEAST
Trigger: GGTAGATGCCTCTGATCCTCAGTATTCTCTCTGGCA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGCCGCTGTCGCTTCATaGGCAGCTCTGTGTACACTG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIAAVAS*AALCTL
Trigger: CAGTGTACACAGAGCTGCTCATGAAGCGACAGCGGC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGCATGGCCAGGCCAATaGGCAATGTGGCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIAWPGQ*AMWPGR
Trigger: TCTTCCTGGCCACATTGCTCATTGGCCTGGCCATGC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAGGGGCTACATTCCCTaGGATGAGTCAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIRGYIP*DESSPA
Trigger: GGCTGGGCTTGACTCATCTCAGGGAATGTAGCCCCT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCAGACAGCCCTCAGGGTaGACAGAGAGGTCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIRQPSG*TERSGV
Trigger: CACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCTTCTAGACCAATGGTaGGTAATGGACCGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGLLDQW*VMDRGS
Trigger: ACTGCCTCGGTCCATTACTCACCATTGGTCTAGAAG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAACTGGCTCCAGCAGTCTaGCTAAGCCCCACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHELAPAV*LSPTPC
Trigger: GCAAGGGGTGGGGCTTAGTCAGACTGCTGGAGCCAG...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGTTGGGCACAGCATATaGCTGAGCCGCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLVGHSI*LSRIDA
Trigger: GGCATCTATGCGGCTCAGGCATATGCTGTGCCCAAC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGTTGGGCACAGCATATaGCTGAGCCGCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSVGHSI*LSRIDA
Trigger: GGCATCTATGCGGCTCAGGCATATGCTGTGCCCAAC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGCTAGTCGGGCCCCTTaGGTAGCAACTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCASRAP*VATANS
Trigger: ACTATTTGCAGTTGCTACGCAAGGGGCCCGACTAGC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCTCAGGGACTAGCGGCTaGCATAGTACAGGCGCATGG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRISGTSG*HSTGAW
Trigger: CCATGCGCCTGTACTATGGCAGCCGCTAGTCCCTGA...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCTAAGCCCCACCCCTTaGTCAATTCCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGLSPTP*SIPSEA
Trigger: AGCTTCTGATGGAATTGAGCAAGGGGTGGGGCTTAG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTTGGAAAGGGGGAGGTaGTTTCCTAGTGGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILLERGR*FPSGQV
Trigger: TACTTGGCCACTAGGAAAGCACCTCCCCCTTTCCAA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTAACAGCGAGCCATCCTaGCCCACTCCACTGTTGACT +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLNSEPS*PTPLLT
Trigger: AGTCAACAGTGGAGTGGGCCAGGATGGCTCGCTGTT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAACAGCGAGCCATCCTaGCCCACTCCACTGTTGACT +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSNSEPS*PTPLLT
Trigger: AGTCAACAGTGGAGTGGGCCAGGATGGCTCGCTGTT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCACTGATGCCCTCAGTTTaGCCACCACATAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSLMPSV*PPHSQP
Trigger: TGGCTGGCTATGTGGTGGCCAAACTGAGGGCATCAG...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTATCCTGCCTCTTCCATaGCACCTAGAGCTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLILPLP*HLELVG
Trigger: CCCGACTAGCTCTAGGTGCCATGGAAGAGGCAGGAT...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGTCCATTTAGTGCCTaGCTCAGCACCACGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCSPFSA*LSTTSA
Trigger: AGCACTCGTGGTGCTGAGCCAGGCACTAAATGGACT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGGGAGGGGGATCTGGTaGTGGCGCCCAATCTACAGG +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEGRGIW*WRPIYR
Trigger: CCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGAACTTGGTTGGGGGTaGGGGATGGTAAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCELGWG*GMVSIS
Trigger: GGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTGCTGCCCAACAAGGATaGGGTTATTTCTCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGAAQQG*GYFSGL
Trigger: TAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGC...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGCTTCCGGAGCATTTTTaGAAAGGGGGAGGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILLPEHF*KGGGAF
Trigger: GAAAGCACCTCCCCCTTTCCAAAAATGCTCCGGAAG...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCATGAAAGTGGAAGGGTaGGGATCCCTTATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPMKVEG*GSLMEE
Trigger: CTCTTCCATAAGGGATCCTCACCCTTCCACTTTCAT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCTCTTCTACACGCCGCTaGAGGCTTTCCAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRISSTRR*RLSSWF
Trigger: GAACCAGCTGGAAAGCCTGCAGCGGCGTGTAGAAGA...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGCTAGTCGGGCCCCTTaGGTAGCAACTGCAAATAGT +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLASRAP*VATANS
Trigger: ACTATTTGCAGTTGCTACGCAAGGGGCCCGACTAGC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCATCCTGCCTCTTCCATaGCACCTAGAGCTAGTCGGG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIILPLP*HLELVG
Trigger: CCCGACTAGCTCTAGGTGCCATGGAAGAGGCAGGAT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGTTGGAGATAGCAAATaGATGACAGCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPVGDSK*MTAGES
Trigger: GGATTCCCCAGCTGTCATCCATTTGCTATCTCCAAC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGGTTGGAGATAGCAAATaGATGACAGCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: SWGIQIKCLHLKAELLILVGDSK*MTAGES
Trigger: GGATTCCCCAGCTGTCATCCATTTGCTATCTCCAAC...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCACATGGGCACCGTACATaGCAGTGGATAGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSHGHRT*QWIGVA
Trigger: TGCTACTCCTATCCACTGCCATGTACGGTGCCCATG...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCGCATAACAGTAGCTTaGTCAGCTCAGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCRITVA*SAQSAA
Trigger: TGCTGCTGACTGAGCTGACCAAGCTACTGTTATGCG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAAGTCCATTTAGTGCCTaGCTCAGCACCACGAGTGCT +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSSPFSA*LSTTSA
Trigger: AGCACTCGTGGTGCTGAGCCAGGCACTAAATGGACT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGAACTTGGTTGGGGGTaGGGGATGGTAAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSELGWG*GMVSIS
Trigger: GGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCACTCCAGTGGCTCTGCTaGGTGACTAAAGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSLQWLC*VTKVGK
Trigger: CTTGCCTACTTTAGTCACCCAGCAGAGCCACTGGAG...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGGTTTCCTGTACCTaGTCTCAGGTCACTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLQVSCT*SQVTLC
Trigger: GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTG...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCATGAAAGTGGAAGGGTaGGGATCCCTTATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCMKVEG*GSLMEE
Trigger: CTCTTCCATAAGGGATCCTCACCCTTCCACTTTCAT...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGGGGCTACATTCCCTaGGATGAGTCAAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHERGYIP*DESSPA
Trigger: GGCTGGGCTTGACTCATCTCAGGGAATGTAGCCCCT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCAAGGGTGAATGTTTTTaGGTCTGTGCTAGTAACGGG +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPKGECF*VCASNG
Trigger: CCCGTTACTAGCACAGACTCAAAAACATTCACCCTT...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR GCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAACCGCATAGATGCCAGTaGAGGTGCCCACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEPHRCQ*RCPQQS
Trigger: GCTTTGCTGTGGGCACCTGCACTGGCATCTATGCGG...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGAGCCGCCGCCAGCATaGAGACCTAGATTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEEPPPA*RPRFRS
Trigger: GCTTCTGAATCTAGGTCTGCATGCTGGCGGCGGCTC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCGTTGGAGATAGCAAATaGATGACAGCTGGGGAATCC +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCVGDSK*MTAGES
Trigger: GGATTCCCCAGCTGTCATCCATTTGCTATCTCCAAC...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAACACAAGACCCTGGGTaGCTAAGGGGCAGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHETQDPG*LRGSRD
Trigger: ATCCCTGCTGCCCCTTAGCCACCCAGGGTCTTGTGT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCGCATAACAGTAGCTTaGTCAGCTCAGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLRITVA*SAQSAA
Trigger: TGCTGCTGACTGAGCTGACCAAGCTACTGTTATGCG...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCACGCATAACAGTAGCTTaGTCAGCTCAGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSRITVA*SAQSAA
Trigger: TGCTGCTGACTGAGCTGACCAAGCTACTGTTATGCG...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGGTGAGGATCCCTTATaGAAGAGTCATGCACCATGG +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSGEDPL*KSHAPW
Trigger: CCATGGTGCATGACTCTTCCATAAGGGATCCTCACC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTTGGTTGTATAATCTGTaGCAACTGGGCCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGWLYNL*QLGLLA
Trigger: TGCAAGAAGGCCCAGTTGCCACAGATTATACAACCA...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCTGCCAGAGAGAATACTaGGGATCAGAGGCATCTACC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRICQREY*GSEAST
Trigger: GGTAGATGCCTCTGATCCTCAGTATTCTCTCTGGCA...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCCAGTTAAAGAGACACTaGTTGAGCTACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPQLKRH*LSYRFP
Trigger: AGGAAACCTGTAGCTCAATCAGTGTCTCTTTAACTG...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR GCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCCTAAGCCCCACCCCTTaGTCAATTCCATCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRILSPTP*SIPSEA
Trigger: AGCTTCTGATGGAATTGAGCAAGGGGTGGGGCTTAG...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAACAGCGAGCCATCCTaGCCCACTCCACTGTTGACT +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHENSEPS*PTPLLT
Trigger: AGTCAACAGTGGAGTGGGCCAGGATGGCTCGCTGTT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGGTCCGGAATCAGGGTaGAAGTTGTCAGGGACTAGC +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEGPESG*KLSGTS
Trigger: GCTAGTCCCTGACAACTTCCACCCTGATTCCGGACC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGCTGCCCAACAAGGATaGGGTTATTTCTCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIAAQQG*GYFSGL
Trigger: TAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGGTGAGGATCCCTTATaGAAGAGTCATGCACCATGG +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIGEDPL*KSHAPW
Trigger: CCATGGTGCATGACTCTTCCATAAGGGATCCTCACC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGT +
Preference number: 4 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGIICGN*AFLHES
Trigger: ACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTAT...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTGTCTTGGTTCCTGGATaGGCTTTACCTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLVLVPG*ALPLSS
Trigger: GGAAGAAAGAGGTAAAGCCCATCCAGGAACCAAGAC...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCAGTTAAAGAGACACTaGTTGAGCTACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCQLKRH*LSYRFP
Trigger: AGGAAACCTGTAGCTCAATCAGTGTCTCTTTAACTG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCGGGAATGGGGTAAAGTaGGGAGTGTTTAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIGNGVK*GVFKGE
Trigger: TTCACCCTTAAACACTCCTCACTTTACCCCATTCCC...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR TCA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCCTATGTTCTAGTGCCTaGCATTTAGTAAATGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPLCSSA*HLVNVW
Trigger: CCACACATTTACTAAATGTCAGGCACTAGAACATAG...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAACATGGGCACCGTACATaGCAGTGGATAGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEHGHRT*QWIGVA
Trigger: TGCTACTCCTATCCACTGCCATGTACGGTGCCCATG...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTTGGTTGTATAATCTGTaGCAACTGGGCCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLWLYNL*QLGLLA
Trigger: TGCAAGAAGGCCCAGTTGCCACAGATTATACAACCA...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCACAGTTAAAGAGACACTaGTTGAGCTACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSQLKRH*LSYRFP
Trigger: AGGAAACCTGTAGCTCAATCAGTGTCTCTTTAACTG...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR TCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAAAGGAGTGTTTGAATaGGGGTGGTGTGAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEKGVFE*GWCECP
Trigger: CGGACACTCACACCACCCTCATTCAAACACTCCTTT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGCTGCCCAACAAGGATaGGGTTATTTCTCAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEAAQQG*GYFSGL
Trigger: TAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAGAGTGTCCGTGTGATTaGAAACATCGTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEECPCD*KHRVTG
Trigger: CCCAGTGACACGATGTTTCCAATCACACGGACACTC...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAATTCCATCAGAAGCTaGGAATTGGGAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHENSIRS*ELGGDG
Trigger: CCCATCCCCTCCCAATTCCCAGCTTCTGATGGAATT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGT +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRIIICGN*AFLHES
Trigger: ACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTAT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAATAATCTGTGGCAACTaGGCCTTCTTGCATGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEIICGN*AFLHES
Trigger: ACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTAT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CCA 90 bp TGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAGTGGAAGGGTGAGGATCACAATTTTATTGTCTTaGTTCCTGGATGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: CIICGNWAFLHESGRVRITILLS*FLDGLY
Trigger: GTAAAGCCCATCCAGGAACCAAGACAATAAAATTGT...GATCCTCACCCTTCCACTTTCATGCAAGAAGGCCCAGTTGCCACAGATTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CCA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAAAAAAGCTTCCTGAGATaGCAGTGGCAAAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEKSFLR*QWQRKT
Trigger: TGTCTTTCTTTGCCACTGCCATCTCAGGAAGCTTTT...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS GCA 90 bp GAGCGCACTCACGACCGGGGCGCGATGATCTCACTCGTGCGCGAGTaGGCGCGGCGCATGTTCGGCGTGTCGGTCTTCAGGCGCCTGATG +
Preference number: 5 (lower is better)
Translates to: ERTHDRGAMISLVRE*ARRMFGVSVFRRLM
Trigger: CATCAGGCGCCTGAAGACCGACACGCCGAACATGCGCCGCGCGCACTCGCGCACGAGTGAGATCATCGCGCCCCGGTCGTGAGTGCGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS TCA 90 bp TCGAGTCTCAGGCTGCGTGTGAGCGCACTCACGACCGGGGCGCGATaGTCTCACTCGTGCGCGAGTGCGCGCGGCGCATGTTCGGCGTGT +
Preference number: 5 (lower is better)
Translates to: SSLRLRVSALTTGAR*SHSCASARGACSAC
Trigger: ACACGCCGAACATGCGCCGCGCGCACTCGCGCACGAGTGAGATCATCGCGCCCCGGTCGTGAGTGCGCTCACACGCAGCCTGAGACTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS GCA 90 bp GCCGAACTTGTTGCGCAGGCGCATCCCCGCCTCCCTCGTGCCGACTaGCCCGGCCATCTTTACGGAGGGCGAAGGCACTTCCGGAGCATT +
Preference number: 5 (lower is better)
Translates to: AELVAQAHPRLPRAD*PGHLYGGRRHFRSI
Trigger: AATGCTCCGGAAGTGCCTTCGCCCTCCGTAAAGATGGCCGGGGCAGTCGGCACGAGGGAGGCGGGGATGCGCCTGCGCAACAAGTTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 90 bp CGGCGTGTCGGTCTTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTaGTGTCAGCGGTTTCGCTGGCGTTCGTGGGCCTCCCCCGGACCC +
Preference number: 5 (lower is better)
Translates to: RRVGLQAPDEFIVGR*CQRFRWRSWASPGP
Trigger: GGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATGAACTCATCAGGCGCCTGAAGACCGACACGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS TCA 90 bp AGATACTTCCACGTGACCCCCTCCCGTCGAGTCTCAGGCTGCGTGTaGGCGCACTCACGACCGGGGCGCGATGATCTCACTCGTGCGCGA +
Preference number: 5 (lower is better)
Translates to: RYFHVTPSRRVSGCV*AHSRPGRDDLTRAR
Trigger: TCGCGCACGAGTGAGATCATCGCGCCCCGGTCGTGAGTGCGCTCACACGCAGCCTGAGACTCGACGGGAGGGGGTCACGTGGAAGTATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS GCA 90 bp CCGTACATGGCAGTGGATAGGAGTAGCATCAGGGTCCAGCGGGCCTaGCTGGGACGGCCCAGGCCTGGCATACCCCCATCCTCTACACTC +
Preference number: 5 (lower is better)
Translates to: PYMAVDRSSIRVQRA*LGRPRPGIPPSSTL
Trigger: GAGTGTAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCTGATGCTACTCCTATCCACTGCCATGTACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS CCA 90 bp GAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCGTTCGTaGGCCTCCCCCGGACCCACACACGGAAACACGCAACCATTCGGG +
Preference number: 5 (lower is better)
Translates to: EFIVGRWCQRFRWRS*ASPGPTHGNTQPFG
Trigger: CCCGAATGGTTGCGTGTTTCCGTGTGTGGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATGAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 90 bp GCGCCTGATGAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTaGCGTTCGTGGGCCTCCCCCGGACCCACACACGGAAACACGCAA +
Preference number: 5 (lower is better)
Translates to: APDEFIVGRWCQRFR*RSWASPGPTHGNTQ
Trigger: TTGCGTGTTTCCGTGTGTGGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATGAACTCATCAGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 90 bp ACATGGCAGTGGATAGGAGTAGCATCAGGGTCCAGCGGGCCTGCCTaGGACGGCCCAGGCCTGGCATACCCCCATCCTCTACACTCATAC +
Preference number: 5 (lower is better)
Translates to: TWQWIGVASGSSGPA*DGPGLAYPHPLHSY
Trigger: GTATGAGTGTAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCTGATGCTACTCCTATCCACTGCCATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGGCGCATAACAGTAGCTaGGTCAGCTCAGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWAHNSS*VSSVSS
Trigger: GCTGCTGACTGAGCTGACCAAGCTACTGTTATGCGC...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp TGGGAGGGGGATCTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGTCTGGAAGAACTTGGTaGGGGGTGGGGGATGGTAAG +
Preference number: 5 (lower is better)
Translates to: WEGDLVVAPNLQGPESGWSGRTW*GVGDGK
Trigger: CTTACCATCCCCCACCCCCAACCAAGTTCTTCCAGA...CCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAGATCCCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCCCCGCCGAACTTGTaGCGCAGGCGCATCCCCGCC +
Preference number: 5 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSPPNL*RRRIPA
Trigger: GGCGGGGATGCGCCTGCGCAACAAGTTCGGCGGGGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CAA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGTCTGGAAGAACTTGGTaGGGGGTGGGGGATGGTAAG +
Preference number: 5 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGSGRTW*GVGDGK
Trigger: CTTACCATCCCCCACCCCCAACCAAGTTCTTCCAGA...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTCTTCCCCGCCGAACTaGTTGCGCAGGCGCATCCCC +
Preference number: 5 (lower is better)
Translates to: SWGIQIKCLHLKAELLILSSPPN*LRRRIP
Trigger: GGGGATGCGCCTGCGCAACAAGTTCGGCGGGGAAGA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CAA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCCCCCTGGGGCCATGCTaGCCAGCCTACCAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCPLGPC*PAYQKG
Trigger: TCCCTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGG...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGACACTGTTGAGGCAGTaGACAGGAGCCGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGTLLRQ*TGAAEE
Trigger: TTCTTCTGCGGCTCCTGTCAACTGCCTCAACAGTGT...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS-3UTR CAA 90 bp CTGGTGGTGGCGCCCAATCTACAGGGTCCGGAATCAGGGTGGAAGTTGTCAGGGACTAAGCCCCACCCCTaGCTCAATTCCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LVVAPNLQGPESGWKLSGTKPHP*LNSIRS
Trigger: GCTTCTGATGGAATTGAGCAAGGGGTGGGGCTTAGT...CCCTGACAACTTCCACCCTGATTCCGGACCCTGTAGATTGGGCGCCACCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCCCCTGGGGCCATGCTaGCCAGCCTACCAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLPLGPC*PAYQKG
Trigger: TCCCTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGG...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCGGTGTTCCCGGGAACTaGAAGGCCCCCTGCTGCATA +
Preference number: 5 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPGVPGN*KAPCCI
Trigger: TATGCAGCAGGGGGCCTTCAAGTTCCCGGGAACACC...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS TCA 90 bp GCAGTTGACAGGAGCCGCAGAAGAAACAAGGGACATCCTCACTCCTaGGCCGCTCCAGAGTCGCTTCTCCCCGGAACTAAAAAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: AVDRSRRRNKGHPHS*AAPESLLPGTKKVK
Trigger: CTTGACCTTTTTAGTTCCGGGGAGAAGCGACTCTGGAGCGGCTCAGGAGTGAGGATGTCCCTTGTTTCTTCTGCGGCTCCTGTCAACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS GCA 90 bp ACGGAGGGCGAAGGCACTTCCGGAGCATTTTTGGAAAGGGGGAGGTaGTTTCCTAGTGGCCAAGTACGCCTCTCTCAGATACTTCCACGT +
Preference number: 5 (lower is better)
Translates to: TEGEGTSGAFLERGR*FPSGQVRLSQILPR
Trigger: ACGTGGAAGTATCTGAGAGAGGCGTACTTGGCCACTAGGAAAGCACCTCCCCCTTTCCAAAAATGCTCCGGAAGTGCCTTCGCCCTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CAA 90 bp AGGACAAAGCAGGGAGCTGCCCAACAAGGATGGGGTTATTTCTCAGGCCTAGGTCACCACTCCACACTGTaGAGGCAGTTGACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RTKQGAAQQGWGYFSGLGHHSTL*RQLTGA
Trigger: GGCTCCTGTCAACTGCCTCAACAGTGTGGAGTGGTG...ACCTAGGCCTGAGAAATAACCCCATCCTTGTTGGGCAGCTCCCTGCTTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS GCA 90 bp GCTCATCCTGCCTCTTCCATGGCACCTAGAGCTAGTCGGGCCCCTTaGGTAGCAACTGCAAATAGTCCCTTAATGTCTTCTCCACGTTGG +
Preference number: 5 (lower is better)
Translates to: AHPASSMAPRASRAP*VATANSPLMSSPRW
Trigger: CCAACGTGGAGAAGACATTAAGGGACTATTTGCAGTTGCTACGCAAGGGGCCCGACTAGCTCTAGGTGCCATGGAAGAGGCAGGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
ENST00000623481.3
CDS-3UTR CAA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGGTGTTCCCGGGAACTaGAAGGCCCCCTGCTGCATA +
Preference number: 5 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSGVPGN*KAPCCI
Trigger: TATGCAGCAGGGGGCCTTCAAGTTCCCGGGAACACC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp AGCTGGGGAATCCAGATAAAGTGTCTCCACCTGAAGGCTGAGCTGCTCATCCTGTTAGGCAGAGAATCCTaGTCATCCGCCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SWGIQIKCLHLKAELLILLGRES*SSAIFP
Trigger: GGGGAAGATGGCGGATGACAAGGATTCTCTGCCTAA...CAGGATGAGCAGCTCAGCCTTCAGGTGGAGACACTTTATCTGGATTCCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS-3UTR CAA 90 bp GAGACACTGATTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCTGGCCCACTCCACTGTaGACTTCGTCTTCTACACGC +
Preference number: 5 (lower is better)
Translates to: ETLIELQVSCTWSQVTLCWPTPL*TSSSTR
Trigger: GCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCCA...GCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAATCAGTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAACCCCTGGGGCCATGCTaGCCAGCCTACCAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEPLGPC*PAYQKG
Trigger: TCCCTTCTGGTAGGCTGGCAAGCATGGCCCCAGGGG...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTTGGCCCACTCCACTGTaGACTTCGTCTTCTACACGC +
Preference number: 5 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLWPTPL*TSSSTR
Trigger: GCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCCA...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAGCGCATAACAGTAGCTaGGTCAGCTCAGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSAHNSS*VSSVSS
Trigger: GCTGCTGACTGAGCTGACCAAGCTACTGTTATGCGC...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp TTGAGCTACAGGTTTCCTGTACCTGGTCTCAGGTCACTCTGTGCAGAGCTTCCCCCTATAAAAGCTTCCTaGTCATCCGCCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LSYRFPVPGLRSLCAELPPIKAS*SSAIFP
Trigger: GGGGAAGATGGCGGATGACAAGGAAGCTTTTATAGG...GGGAAGCTCTGCACAGAGTGACCTGAGACCAGGTACAGGAAACCTGTAGCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612662.2
CDS-3UTR CAA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTTTAGGCAGAGAATCCTaGTCATCCGCCATCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLLGRES*SSAIFP
Trigger: GGGGAAGATGGCGGATGACAAGGATTCTCTGCCTAA...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323146.8
CDS-3UTR CAA 90 bp ACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTCAACTAAGCCCCACCCCTaGCTCAATTCCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: TWLGVGDGKHFLNQTHTSTKPHP*LNSIRS
Trigger: GCTTCTGATGGAATTGAGCAAGGGGTGGGGCTTAGT...TGAAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp AGTGGTTTGGGTAATGGTTGTATAATCTGTGGCAACTGGGCCTTCTTGCATGAATGGCCCACTCCACTGTaGACTTCGTCTTCTACACGC +
Preference number: 5 (lower is better)
Translates to: SGLGNGCIICGNWAFLHEWPTPL*TSSSTR
Trigger: GCGTGTAGAAGACGAAGTCAACAGTGGAGTGGGCCA...TTCATGCAAGAAGGCCCAGTTGCCACAGATTATACAACCATTACCCAAACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS-3UTR CAA 90 bp GAACTTGGTTGGGGGTGGGGGATGGTAAGCATTTCCTTAACCAAACCCACACTTTATGCAAAGGAGTGTTaGAATGAGGGTGGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: ELGWGWGMVSISLTKPTLYAKEC*NEGGVS
Trigger: ACTCACACCACCCTCATTCAAACACTCCTTTGCATA...AAGTGTGGGTTTGGTTAAGGAAATGCTTACCATCCCCCACCCCCAACCAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 90 bp GCATATAAGTATGAAATTCAGAATGTATGCAAAGGAGTGTTTGAATaGGGGTGGTGTGAGTGTCCGTGTGATTGGAAACATCGTGTCACT +
Preference number: 5 (lower is better)
Translates to: AYKYEIQNVCKGVFE*GWCECPCDWKHRVT
Trigger: AGTGACACGATGTTTCCAATCACACGGACACTCACACCACCCTCATTCAAACACTCCTTTGCATACATTCTGAATTTCATACTTATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 90 bp ACATTTAGTAAATGTGTGGGTAATGCTGAGCTTCTAGACCAATGGTaGGTAATGGACCGAGGCAGTTTCCTGGACAATTTTATTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TFSKCVGNAELLDQW*VMDRGSFLDNFIVL
Trigger: CAAGACAATAAAATTGTCCAGGAAACTGCCTCGGTCCATTACTCACCATTGGTCTAGAAGCTCAGCATTACCCACACATTTACTAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 72 bp AGGCTGCGTGTGAGCGCACTCACGACCGGGGCGCGATaGTCTCACTCGTGCGCGAGTGCGCGCGGCGCATGT +
Preference number: 6 (lower is better)
Translates to: RLRVSALTTGAR*SHSCASARGAC
Trigger: ACATGCGCCGCGCGCACTCGCGCACGAGTGAGATCATCGCGCCCCGGTCGTGAGTGCGCTCACACGCAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS GCA 72 bp CACGACCGGGGCGCGATGATCTCACTCGTGCGCGAGTaGGCGCGGCGCATGTTCGGCGTGTCGGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: HDRGAMISLVRE*ARRMFGVSVFR
Trigger: CCTGAAGACCGACACGCCGAACATGCGCCGCGCGCACTCGCGCACGAGTGAGATCATCGCGCCCCGGTCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS GCA 72 bp GTTGCGCAGGCGCATCCCCGCCTCCCTCGTGCCGACTaGCCCGGCCATCTTTACGGAGGGCGAAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: VAQAHPRLPRAD*PGHLYGGRRHF
Trigger: GAAGTGCCTTCGCCCTCCGTAAAGATGGCCGGGGCAGTCGGCACGAGGGAGGCGGGGATGCGCCTGCGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS TCA 72 bp CACGTGACCCCCTCCCGTCGAGTCTCAGGCTGCGTGTaGGCGCACTCACGACCGGGGCGCGATGATCTCACT +
Preference number: 6 (lower is better)
Translates to: HVTPSRRVSGCV*AHSRPGRDDLT
Trigger: AGTGAGATCATCGCGCCCCGGTCGTGAGTGCGCTCACACGCAGCCTGAGACTCGACGGGAGGGGGTCACGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 72 bp CAGGGTCCAGCGGGCCTGCCTGGGACGGCCCAGGCCTaGCATACCCCCATCCTCTACACTCATACCCACACA +
Preference number: 6 (lower is better)
Translates to: QGPAGLPGTAQA*HTPILYTHTHT
Trigger: TGTGTGGGTATGAGTGTAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS CCA 72 bp GTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCGTTCGTaGGCCTCCCCCGGACCCACACACGGAAACACGCAA +
Preference number: 6 (lower is better)
Translates to: VGRWCQRFRWRS*ASPGPTHGNTQ
Trigger: TTGCGTGTTTCCGTGTGTGGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 72 bp TGGATAGGAGTAGCATCAGGGTCCAGCGGGCCTGCCTaGGACGGCCCAGGCCTGGCATACCCCCATCCTCTA +
Preference number: 6 (lower is better)
Translates to: WIGVASGSSGPA*DGPGLAYPHPL
Trigger: TAGAGGATGGGGGTATGCCAGGCCTGGGCCGTCCCAGGCAGGCCCGCTGGACCCTGATGCTACTCCTATCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
CDS CCA 72 bp GAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTaGCGTTCGTGGGCCTCCCCCGGACCCACACACGGA +
Preference number: 6 (lower is better)
Translates to: EFIVGRWCQRFR*RSWASPGPTHG
Trigger: TCCGTGTGTGGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATGAACTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 72 bp GGTCTTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTaGTGTCAGCGGTTTCGCTGGCGTTCGTGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GLQAPDEFIVGR*CQRFRWRSWAS
Trigger: GGAGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATGAACTCATCAGGCGCCTGAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS TCA 72 bp AGGAGCCGCAGAAGAAACAAGGGACATCCTCACTCCTaGGCCGCTCCAGAGTCGCTTCTCCCCGGAACTAAA +
Preference number: 6 (lower is better)
Translates to: RSRRRNKGHPHS*AAPESLLPGTK
Trigger: TTTAGTTCCGGGGAGAAGCGACTCTGGAGCGGCTCAGGAGTGAGGATGTCCCTTGTTTCTTCTGCGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS CAA 72 bp ATGCTCTCCCCACACCACTCCACACTGTTGAGGCAGTaGACAGGAGCCGCAGAAGAAACAAGGGACATCCTC +
Preference number: 6 (lower is better)
Translates to: MLSPHHSTLLRQ*TGAAEETRDIL
Trigger: GAGGATGTCCCTTGTTTCTTCTGCGGCTCCTGTCAACTGCCTCAACAGTGTGGAGTGGTGTGGGGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 72 bp AATCCTAGGACAAGCGAGAGGCTGGCTCCAGCAGTCTaGCTAAGCCCCACCCCTTGCTCAATTCCATCAGAA +
Preference number: 6 (lower is better)
Translates to: NPRTSERLAPAV*LSPTPCSIPSE
Trigger: TTCTGATGGAATTGAGCAAGGGGTGGGGCTTAGTCAGACTGCTGGAGCCAGCCTCTCGCTTGTCCTAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514199.1
ENST00000612662.2
CDS GCA 72 bp GCCTCTTCCATGGCACCTAGAGCTAGTCGGGCCCCTTaGGTAGCAACTGCAAATAGTCCCTTAATGTCTTCT +
Preference number: 6 (lower is better)
Translates to: ASSMAPRASRAP*VATANSPLMSS
Trigger: AGAAGACATTAAGGGACTATTTGCAGTTGCTACGCAAGGGGCCCGACTAGCTCTAGGTGCCATGGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323146.8
ENST00000514199.1
ENST00000612662.2
ENST00000623481.3
CDS GCA 72 bp GAAGGCACTTCCGGAGCATTTTTGGAAAGGGGGAGGTaGTTTCCTAGTGGCCAAGTACGCCTCTCTCAGATA +
Preference number: 6 (lower is better)
Translates to: EGTSGAFLERGR*FPSGQVRLSQI
Trigger: TATCTGAGAGAGGCGTACTTGGCCACTAGGAAAGCACCTCCCCCTTTCCAAAAATGCTCCGGAAGTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623481.3
CDS CCA 72 bp TGGACCGAGGCAGTTTCCTGGACAATTTTATTGTCTTaGTTCCTGGATGGGCTTTACCTCTTTCTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: WTEAVSWTILLS*FLDGLYLFLPK
Trigger: CTTGGGAAGAAAGAGGTAAAGCCCATCCAGGAACCAAGACAATAAAATTGTCCAGGAAACTGCCTCGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS CAA 72 bp CATCAGGAAACCACTACTGACTCCATTATGAGCTCCTaGAAAGTCGTGACCAGTCTGTCTTGGCTACTATGT +
Preference number: 6 (lower is better)
Translates to: HQETTTDSIMSS*KVVTSLSWLLC
Trigger: ACATAGTAGCCAAGACAGACTGGTCACGACTTTCAAGGAGCTCATAATGGAGTCAGTAGTGGTTTCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 72 bp AAATGTGTGGGTAATGCTGAGCTTCTAGACCAATGGTaGGTAATGGACCGAGGCAGTTTCCTGGACAATTTT +
Preference number: 6 (lower is better)
Translates to: KCVGNAELLDQW*VMDRGSFLDNF
Trigger: AAAATTGTCCAGGAAACTGCCTCGGTCCATTACTCACCATTGGTCTAGAAGCTCAGCATTACCCACACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1
CDS TCA 72 bp GTGACCAGTCTGTCTTGGCTACTATGTTCTAGTGCCTaGCATTTAGTAAATGTGTGGGTAATGCTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: VTSLSWLLCSSA*HLVNVWVMLSF
Trigger: GAAGCTCAGCATTACCCACACATTTACTAAATGTCAGGCACTAGAACATAGTAGCCAAGACAGACTGGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514199.1